CoV-GLUE | Mutations | Mutation
Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):
ORF | CodonNum | Mut | ORF1abMut | MutType | RefCodon | MutCodon | AACount | CodonCount | CodonProp | Genome Position |
ORF1ab/nsp3 | 560 | M560I | M1378I | nonsyn | atG | atT | 4766 | 4667 | 0.979228 | 4397-4399 |
ORF1ab/nsp3 | 560 | M560I | M1378I | nonsyn | atG | atC | 4766 | 57 | 0.0119597 | 4397-4399 |
ORF1ab/nsp3 | 560 | M560I | M1378I | nonsyn | atG | atA | 4766 | 42 | 0.00881242 | 4397-4399 |
ORF1ab/nsp3 | 560 | M560L | M1378L | nonsyn | Atg | Ttg | 271 | 242 | 0.892989 | 4397-4399 |
ORF1ab/nsp3 | 560 | M560L | M1378L | nonsyn | Atg | Ctg | 271 | 29 | 0.107011 | 4397-4399 |
ORF1ab/nsp3 | 560 | M560V | M1378V | nonsyn | Atg | Gtg | 103 | 103 | 1 | 4397-4399 |
ORF1ab/nsp3 | 560 | M560del | M1378del | del | ATG | --- | 48 | 48 | 1 | 4397-4399 |
ORF1ab/nsp3 | 560 | M560T | M1378T | nonsyn | aTg | aCg | 12 | 11 | 0.916667 | 4397-4399 |
ORF1ab/nsp3 | 560 | M560T | M1378T | nonsyn | aTG | aCC | 12 | 1 | 0.0833333 | 4397-4399 |
ORF1ab/nsp3 | 560 | M560del1 | M1378del1 | del | atG | at- | 6 | 6 | 1 | 4397-4399 |
ORF1ab/nsp3 | 560 | M560F | M1378F | nonsyn | AtG | TtT | 4 | 4 | 1 | 4397-4399 |
ORF1ab/nsp3 | 560 | M560K | M1378K | nonsyn | aTg | aAg | 3 | 3 | 1 | 4397-4399 |
ORF1ab/nsp3 | 560 | M560N | M1378N | nonsyn | aTG | aAT | 2 | 2 | 1 | 4397-4399 |
ORF1ab/nsp3 | 560 | M560del2 | M1378del2 | del | ATg | --g | 2 | 1 | 0.5 | 4397-4399 |
ORF1ab/nsp3 | 560 | M560del2 | M1378del2 | del | ATG | --T | 2 | 1 | 0.5 | 4397-4399 |
ORF1ab/nsp3 | 560 | M560R | M1378R | nonsyn | aTg | aGg | 1 | 1 | 1 | 4397-4399 |
Details of the mutation no within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):
ORF | CodonNum | Mut | RefCodon | MutCodon | CodonCount | AACount | Lineage | LineageCodonProp |
ORF1ab/nsp3 | 560 | M560I | atG | atT | 4667 | 4766 | All | 0.000893 |
ORF1ab/nsp3 | 560 | M560I | atG | atC | 57 | 4766 | All | 0.000011 |
ORF1ab/nsp3 | 560 | M560I | atG | atA | 42 | 4766 | All | 0.000008 |
ORF1ab/nsp3 | 560 | M560I | atG | atT | 522 | 545 | AY.4 | 0.000812 |
ORF1ab/nsp3 | 560 | M560I | atG | atC | 14 | 545 | AY.4 | 0.000022 |
ORF1ab/nsp3 | 560 | M560I | atG | atA | 9 | 545 | AY.4 | 0.000014 |
ORF1ab/nsp3 | 560 | M560I | atG | atT | 519 | 527 | B.1.1.7 | 0.000465 |
ORF1ab/nsp3 | 560 | M560I | atG | atA | 6 | 527 | B.1.1.7 | 0.000005 |
ORF1ab/nsp3 | 560 | M560I | atG | atC | 2 | 527 | B.1.1.7 | 0.000002 |
ORF1ab/nsp3 | 560 | M560I | atG | atT | 378 | 380 | AY.43 | 0.001675 |
ORF1ab/nsp3 | 560 | M560I | atG | atC | 1 | 380 | AY.43 | 0.000004 |
ORF1ab/nsp3 | 560 | M560I | atG | atA | 1 | 380 | AY.43 | 0.000004 |
ORF1ab/nsp3 | 560 | M560L | Atg | Ttg | 242 | 271 | All | 0.000046 |
ORF1ab/nsp3 | 560 | M560L | Atg | Ctg | 29 | 271 | All | 0.000006 |
ORF1ab/nsp3 | 560 | M560I | atG | atT | 264 | 264 | L.3 | 0.93617 |
ORF1ab/nsp3 | 560 | M560I | atG | atT | 252 | 253 | B.1.617.2 | 0.000949 |
ORF1ab/nsp3 | 560 | M560I | atG | atA | 1 | 253 | B.1.617.2 | 0.000004 |
ORF1ab/nsp3 | 560 | M560I | atG | atT | 233 | 235 | B.1.2 | 0.002052 |
ORF1ab/nsp3 | 560 | M560I | atG | atC | 2 | 235 | B.1.2 | 0.000018 |
ORF1ab/nsp3 | 560 | M560L | Atg | Ttg | 220 | 220 | B.1.127 | 0.483516 |
ORF1ab/nsp3 | 560 | M560I | atG | atT | 174 | 174 | AY.4.2 | 0.003774 |
ORF1ab/nsp3 | 560 | M560I | atG | atT | 112 | 118 | B.1 | 0.001026 |
ORF1ab/nsp3 | 560 | M560I | atG | atC | 4 | 118 | B.1 | 0.000037 |
ORF1ab/nsp3 | 560 | M560I | atG | atA | 2 | 118 | B.1 | 0.000018 |
ORF1ab/nsp3 | 560 | M560I | atG | atT | 115 | 117 | AY.44 | 0.0007 |
ORF1ab/nsp3 | 560 | M560I | atG | atA | 2 | 117 | AY.44 | 0.000012 |
ORF1ab/nsp3 | 560 | M560I | atG | atT | 110 | 110 | B.1.258.11 | 0.043599 |
ORF1ab/nsp3 | 560 | M560V | Atg | Gtg | 103 | 103 | All | 0.00002 |
ORF1ab/nsp3 | 560 | M560I | atG | atT | 102 | 102 | B.1.561 | 0.040492 |
ORF1ab/nsp3 | 560 | M560I | atG | atT | 87 | 90 | AY.25 | 0.000523 |
ORF1ab/nsp3 | 560 | M560I | atG | atC | 3 | 90 | AY.25 | 0.000018 |
ORF1ab/nsp3 | 560 | M560I | atG | atT | 84 | 84 | B.1.160 | 0.00262 |
ORF1ab/nsp3 | 560 | M560I | atG | atT | 76 | 79 | P.1 | 0.001197 |
ORF1ab/nsp3 | 560 | M560I | atG | atA | 3 | 79 | P.1 | 0.000047 |
ORF1ab/nsp3 | 560 | M560I | atG | atT | 66 | 66 | AY.102 | 0.00175 |
ORF1ab/nsp3 | 560 | M560V | Atg | Gtg | 63 | 63 | B.1.1.7 | 0.000056 |
ORF1ab/nsp3 | 560 | M560I | atG | atT | 60 | 61 | AY.103 | 0.000373 |
ORF1ab/nsp3 | 560 | M560I | atG | atA | 1 | 61 | AY.103 | 0.000006 |
ORF1ab/nsp3 | 560 | M560I | atG | atT | 60 | 60 | B.1.351 | 0.001784 |
ORF1ab/nsp3 | 560 | M560I | atG | atT | 58 | 59 | AY.3 | 0.000577 |
ORF1ab/nsp3 | 560 | M560I | atG | atC | 1 | 59 | AY.3 | 0.00001 |
ORF1ab/nsp3 | 560 | M560I | atG | atT | 59 | 59 | B.1.429 | 0.001388 |
ORF1ab/nsp3 | 560 | M560I | atG | atT | 56 | 56 | AY.45 | 0.006814 |
ORF1ab/nsp3 | 560 | M560I | atG | atT | 54 | 54 | B.1.1 | 0.00098 |
ORF1ab/nsp3 | 560 | M560I | atG | atT | 49 | 49 | AY.54 | 0.004672 |
ORF1ab/nsp3 | 560 | M560del | ATG | --- | 48 | 48 | All | 0.000009 |
ORF1ab/nsp3 | 560 | M560I | atG | atT | 39 | 41 | B.1.177 | 0.000514 |
ORF1ab/nsp3 | 560 | M560I | atG | atA | 1 | 41 | B.1.177 | 0.000013 |
ORF1ab/nsp3 | 560 | M560I | atG | atC | 1 | 41 | B.1.177 | 0.000013 |
ORF1ab/nsp3 | 560 | M560I | atG | atT | 37 | 37 | B.1.1.222 | 0.007548 |
ORF1ab/nsp3 | 560 | M560I | atG | atT | 31 | 32 | AY.39 | 0.000766 |
ORF1ab/nsp3 | 560 | M560I | atG | atA | 1 | 32 | AY.39 | 0.000025 |
ORF1ab/nsp3 | 560 | M560I | atG | atT | 29 | 29 | C.36.2 | 1 |
ORF1ab/nsp3 | 560 | M560I | atG | atT | 27 | 28 | AY.33 | 0.001803 |
ORF1ab/nsp3 | 560 | M560I | atG | atC | 1 | 28 | AY.33 | 0.000067 |
ORF1ab/nsp3 | 560 | M560I | atG | atT | 26 | 26 | AY.46.6 | 0.001877 |
ORF1ab/nsp3 | 560 | M560I | atG | atT | 26 | 26 | B.1.1.153 | 0.028478 |
ORF1ab/nsp3 | 560 | M560I | atG | atT | 22 | 22 | B.1.177.21 | 0.001682 |
ORF1ab/nsp3 | 560 | M560I | atG | atT | 20 | 22 | B.1.258 | 0.001331 |
ORF1ab/nsp3 | 560 | M560I | atG | atA | 2 | 22 | B.1.258 | 0.000133 |
ORF1ab/nsp3 | 560 | M560I | atG | atT | 22 | 22 | B.1.595 | 0.005741 |
ORF1ab/nsp3 | 560 | M560I | atG | atT | 11 | 22 | D.2 | 0.000825 |
ORF1ab/nsp3 | 560 | M560I | atG | atC | 10 | 22 | D.2 | 0.00075 |
ORF1ab/nsp3 | 560 | M560I | atG | atA | 1 | 22 | D.2 | 0.000075 |
ORF1ab/nsp3 | 560 | M560I | atG | atT | 21 | 21 | AY.9.1 | 0.001758 |
ORF1ab/nsp3 | 560 | M560I | atG | atT | 20 | 20 | AY.6 | 0.000823 |
ORF1ab/nsp3 | 560 | M560I | atG | atT | 19 | 19 | AY.7 | 0.003724 |
ORF1ab/nsp3 | 560 | M560del | ATG | --- | 19 | 19 | B.1.1.7 | 0.000017 |
ORF1ab/nsp3 | 560 | M560I | atG | atT | 19 | 19 | B.1.450 | 0.215909 |
ORF1ab/nsp3 | 560 | M560I | atG | atT | 19 | 19 | B.1.526 | 0.000447 |
ORF1ab/nsp3 | 560 | M560I | atG | atT | 19 | 19 | B.1.597 | 0.087963 |
ORF1ab/nsp3 | 560 | M560I | atG | atT | 16 | 17 | AY.5 | 0.00033 |
ORF1ab/nsp3 | 560 | M560I | atG | atC | 1 | 17 | AY.5 | 0.000021 |
ORF1ab/nsp3 | 560 | M560I | atG | atT | 17 | 17 | B.1.177.8 | 0.012792 |
ORF1ab/nsp3 | 560 | M560I | atG | atT | 17 | 17 | B.1.36 | 0.00248 |
ORF1ab/nsp3 | 560 | M560I | atG | atT | 17 | 17 | C.18 | 0.044041 |
ORF1ab/nsp3 | 560 | M560I | atG | atT | 14 | 16 | AY.26 | 0.000396 |
ORF1ab/nsp3 | 560 | M560I | atG | atC | 1 | 16 | AY.26 | 0.000028 |
ORF1ab/nsp3 | 560 | M560I | atG | atA | 1 | 16 | AY.26 | 0.000028 |
ORF1ab/nsp3 | 560 | M560I | atG | atT | 16 | 16 | C.8 | 0.071429 |
ORF1ab/nsp3 | 560 | M560I | atG | atT | 14 | 15 | AY.46 | 0.001457 |
ORF1ab/nsp3 | 560 | M560I | atG | atC | 1 | 15 | AY.46 | 0.000104 |
ORF1ab/nsp3 | 560 | M560L | Atg | Ttg | 13 | 15 | B.1 | 0.000119 |
ORF1ab/nsp3 | 560 | M560L | Atg | Ctg | 2 | 15 | B.1 | 0.000018 |
ORF1ab/nsp3 | 560 | M560I | atG | atT | 15 | 15 | B.1.221 | 0.001065 |
ORF1ab/nsp3 | 560 | M560I | atG | atT | 8 | 14 | AY.98.1 | 0.000387 |
ORF1ab/nsp3 | 560 | M560I | atG | atC | 6 | 14 | AY.98.1 | 0.000291 |
ORF1ab/nsp3 | 560 | M560I | atG | atT | 12 | 13 | AY.120 | 0.000446 |
ORF1ab/nsp3 | 560 | M560I | atG | atA | 1 | 13 | AY.120 | 0.000037 |
ORF1ab/nsp3 | 560 | M560I | atG | atT | 12 | 13 | AY.23 | 0.000837 |
ORF1ab/nsp3 | 560 | M560I | atG | atA | 1 | 13 | AY.23 | 0.00007 |
ORF1ab/nsp3 | 560 | M560I | atG | atT | 13 | 13 | AY.42 | 0.000523 |
ORF1ab/nsp3 | 560 | M560T | aTg | aCg | 11 | 12 | All | 0.000002 |
ORF1ab/nsp3 | 560 | M560T | aTG | aCC | 1 | 12 | All | 0 |
ORF1ab/nsp3 | 560 | M560I | atG | atT | 11 | 12 | AY.100 | 0.000506 |
ORF1ab/nsp3 | 560 | M560I | atG | atA | 1 | 12 | AY.100 | 0.000046 |
ORF1ab/nsp3 | 560 | M560V | Atg | Gtg | 12 | 12 | AY.27 | 0.000777 |
ORF1ab/nsp3 | 560 | M560I | atG | atT | 12 | 12 | AY.46.4 | 0.001974 |
ORF1ab/nsp3 | 560 | M560I | atG | atT | 12 | 12 | B.1.177.44 | 0.006227 |
ORF1ab/nsp3 | 560 | M560I | atG | atT | 11 | 11 | AY.121 | 0.001488 |
ORF1ab/nsp3 | 560 | M560I | atG | atT | 8 | 11 | AY.98 | 0.000632 |
ORF1ab/nsp3 | 560 | M560I | atG | atA | 2 | 11 | AY.98 | 0.000158 |
ORF1ab/nsp3 | 560 | M560I | atG | atC | 1 | 11 | AY.98 | 0.000079 |
ORF1ab/nsp3 | 560 | M560I | atG | atT | 11 | 11 | B.1.1.28 | 0.003424 |
ORF1ab/nsp3 | 560 | M560I | atG | atT | 10 | 11 | B.1.243 | 0.000696 |
ORF1ab/nsp3 | 560 | M560I | atG | atA | 1 | 11 | B.1.243 | 0.00007 |
ORF1ab/nsp3 | 560 | M560I | atG | atT | 10 | 10 | B.1.1.519 | 0.000397 |
ORF1ab/nsp3 | 560 | M560I | atG | atT | 10 | 10 | B.1.236 | 0.020534 |
ORF1ab/nsp3 | 560 | M560I | atG | atT | 9 | 9 | AY.117 | 0.000761 |
ORF1ab/nsp3 | 560 | M560I | atG | atT | 9 | 9 | AY.61 | 0.000943 |
ORF1ab/nsp3 | 560 | M560I | atG | atT | 9 | 9 | B.1.1.312 | 0.017208 |
ORF1ab/nsp3 | 560 | M560I | atG | atT | 9 | 9 | B.1.1.318 | 0.002716 |
ORF1ab/nsp3 | 560 | M560I | atG | atT | 9 | 9 | C.30 | 0.015544 |
ORF1ab/nsp3 | 560 | M560I | atG | atT | 8 | 8 | AP.1 | 0.012012 |
ORF1ab/nsp3 | 560 | M560I | atG | atT | 8 | 8 | AY.1 | 0.003166 |
ORF1ab/nsp3 | 560 | M560V | Atg | Gtg | 8 | 8 | AY.103 | 0.00005 |
ORF1ab/nsp3 | 560 | M560I | atG | atT | 8 | 8 | AY.106 | 0.002679 |
ORF1ab/nsp3 | 560 | M560I | atG | atT | 8 | 8 | AY.20 | 0.000311 |
ORF1ab/nsp3 | 560 | M560I | atG | atT | 8 | 8 | AY.27 | 0.000518 |
ORF1ab/nsp3 | 560 | M560I | atG | atT | 8 | 8 | AY.99.2 | 0.000737 |
ORF1ab/nsp3 | 560 | M560I | atG | atT | 8 | 8 | B.1.1.50 | 0.005431 |
ORF1ab/nsp3 | 560 | M560I | atG | atT | 8 | 8 | B.1.36.18 | 0.003361 |
ORF1ab/nsp3 | 560 | M560I | atG | atT | 8 | 8 | B.1.427 | 0.000404 |
ORF1ab/nsp3 | 560 | M560I | atG | atT | 8 | 8 | B.1.637 | 0.000585 |
ORF1ab/nsp3 | 560 | M560I | atG | atT | 8 | 8 | C.37 | 0.000929 |
ORF1ab/nsp3 | 560 | M560I | atG | atT | 8 | 8 | R.1 | 0.00072 |
ORF1ab/nsp3 | 560 | M560I | atG | atT | 7 | 7 | AY.118 | 0.000439 |
ORF1ab/nsp3 | 560 | M560I | atG | atT | 7 | 7 | AY.16 | 0.002658 |
ORF1ab/nsp3 | 560 | M560I | atG | atT | 7 | 7 | AY.29 | 0.00011 |
ORF1ab/nsp3 | 560 | M560I | atG | atT | 7 | 7 | AY.7.1 | 0.000789 |
ORF1ab/nsp3 | 560 | M560I | atG | atT | 7 | 7 | B.1.177.54 | 0.004245 |
ORF1ab/nsp3 | 560 | M560I | atG | atT | 7 | 7 | B.1.177.86 | 0.001284 |
ORF1ab/nsp3 | 560 | M560I | atG | atT | 7 | 7 | B.1.240 | 0.001509 |
ORF1ab/nsp3 | 560 | M560I | atG | atT | 6 | 7 | B.1.617.1 | 0.000774 |
ORF1ab/nsp3 | 560 | M560I | atG | atA | 1 | 7 | B.1.617.1 | 0.000129 |
ORF1ab/nsp3 | 560 | M560del1 | atG | at- | 6 | 6 | All | 0.000001 |
ORF1ab/nsp3 | 560 | M560I | atG | atT | 6 | 6 | AY.119 | 0.000212 |
ORF1ab/nsp3 | 560 | M560I | atG | atT | 6 | 6 | B.1.36.8 | 0.006 |
ORF1ab/nsp3 | 560 | M560L | Atg | Ctg | 5 | 5 | AY.26 | 0.000142 |
ORF1ab/nsp3 | 560 | M560I | atG | atT | 5 | 5 | AY.34 | 0.000485 |
ORF1ab/nsp3 | 560 | M560del | ATG | --- | 5 | 5 | AY.4.5 | 0.000537 |
ORF1ab/nsp3 | 560 | M560L | Atg | Ctg | 5 | 5 | AY.5 | 0.000103 |
ORF1ab/nsp3 | 560 | M560I | atG | atT | 5 | 5 | AY.74 | 0.000578 |
ORF1ab/nsp3 | 560 | M560I | atG | atT | 5 | 5 | AY.95 | 0.003805 |
ORF1ab/nsp3 | 560 | M560I | atG | atT | 5 | 5 | B.1.1.10 | 0.005574 |
ORF1ab/nsp3 | 560 | M560I | atG | atT | 5 | 5 | B.1.1.409 | 0.014164 |
ORF1ab/nsp3 | 560 | M560I | atG | atT | 5 | 5 | B.1.177.81 | 0.000947 |
ORF1ab/nsp3 | 560 | M560I | atG | atT | 5 | 5 | B.1.525 | 0.000566 |
ORF1ab/nsp3 | 560 | M560I | atG | atT | 5 | 5 | P.1.14 | 0.000239 |
ORF1ab/nsp3 | 560 | M560I | atG | atT | 5 | 5 | Q.4 | 0.002274 |
ORF1ab/nsp3 | 560 | M560I | atG | atT | 3 | 4 | A | 0.001161 |
ORF1ab/nsp3 | 560 | M560I | atG | atC | 1 | 4 | A | 0.000387 |
ORF1ab/nsp3 | 560 | M560F | AtG | TtT | 4 | 4 | All | 0.000001 |
ORF1ab/nsp3 | 560 | M560I | atG | atT | 4 | 4 | AY.21 | 0.00759 |
ORF1ab/nsp3 | 560 | M560L | Atg | Ctg | 4 | 4 | B.1.1 | 0.000073 |
ORF1ab/nsp3 | 560 | M560V | Atg | Gtg | 4 | 4 | B.1.1.318 | 0.001207 |
ORF1ab/nsp3 | 560 | M560I | atG | atT | 4 | 4 | B.1.1.358 | 0.137931 |
ORF1ab/nsp3 | 560 | M560del | ATG | --- | 4 | 4 | B.1.177 | 0.000053 |
ORF1ab/nsp3 | 560 | M560I | atG | atT | 4 | 4 | B.1.371 | 0.004489 |
ORF1ab/nsp3 | 560 | M560I | atG | atT | 4 | 4 | B.1.516 | 0.007828 |
ORF1ab/nsp3 | 560 | M560I | atG | atT | 4 | 4 | B.1.596 | 0.000349 |
ORF1ab/nsp3 | 560 | M560I | atG | atT | 4 | 4 | B.1.93 | 0.003735 |
ORF1ab/nsp3 | 560 | M560I | atG | atT | 4 | 4 | C.36 | 0.003643 |
ORF1ab/nsp3 | 560 | M560L | Atg | Ttg | 3 | 4 | P.1 | 0.000047 |
ORF1ab/nsp3 | 560 | M560L | Atg | Ctg | 1 | 4 | P.1 | 0.000016 |
ORF1ab/nsp3 | 560 | M560I | atG | atT | 4 | 4 | P.1.12 | 0.001936 |
ORF1ab/nsp3 | 560 | M560K | aTg | aAg | 3 | 3 | All | 0.000001 |
ORF1ab/nsp3 | 560 | M560I | atG | atT | 3 | 3 | AY.29.1 | 0.000662 |
ORF1ab/nsp3 | 560 | M560I | atG | atT | 3 | 3 | AY.38 | 0.001498 |
ORF1ab/nsp3 | 560 | M560del | ATG | --- | 3 | 3 | AY.4 | 0.000005 |
ORF1ab/nsp3 | 560 | M560T | aTg | aCg | 3 | 3 | AY.4 | 0.000005 |
ORF1ab/nsp3 | 560 | M560L | Atg | Ctg | 3 | 3 | AY.4 | 0.000005 |
ORF1ab/nsp3 | 560 | M560V | Atg | Gtg | 3 | 3 | AY.43 | 0.000013 |
ORF1ab/nsp3 | 560 | M560I | atG | atT | 3 | 3 | AY.47 | 0.000093 |
ORF1ab/nsp3 | 560 | M560I | atG | atT | 3 | 3 | AY.5.3 | 0.001012 |
ORF1ab/nsp3 | 560 | M560I | atG | atT | 3 | 3 | AY.69 | 0.00056 |
ORF1ab/nsp3 | 560 | M560I | atG | atT | 3 | 3 | AY.75.1 | 0.000541 |
ORF1ab/nsp3 | 560 | M560I | atG | atT | 3 | 3 | AY.77 | 0.003382 |
ORF1ab/nsp3 | 560 | M560I | atG | atT | 3 | 3 | AY.85 | 0.001282 |
ORF1ab/nsp3 | 560 | M560I | atG | atT | 2 | 3 | AY.9.2 | 0.000073 |
ORF1ab/nsp3 | 560 | M560I | atG | atC | 1 | 3 | AY.9.2 | 0.000037 |
ORF1ab/nsp3 | 560 | M560I | atG | atT | 3 | 3 | B.1.1.1 | 0.00098 |
ORF1ab/nsp3 | 560 | M560I | atG | atT | 3 | 3 | B.1.1.214 | 0.000166 |
ORF1ab/nsp3 | 560 | M560I | atG | atT | 3 | 3 | B.1.1.243 | 0.012245 |
ORF1ab/nsp3 | 560 | M560I | atG | atT | 3 | 3 | B.1.1.37 | 0.000579 |
ORF1ab/nsp3 | 560 | M560I | atG | atT | 3 | 3 | B.1.1.526 | 0.010638 |
ORF1ab/nsp3 | 560 | M560I | atG | atT | 3 | 3 | B.1.1.70 | 0.001023 |
ORF1ab/nsp3 | 560 | M560I | atG | atT | 3 | 3 | B.1.234 | 0.000396 |
ORF1ab/nsp3 | 560 | M560I | atG | atT | 3 | 3 | B.1.517 | 0.001281 |
ORF1ab/nsp3 | 560 | M560del | ATG | --- | 3 | 3 | B.1.617.2 | 0.000011 |
ORF1ab/nsp3 | 560 | M560I | atG | atT | 3 | 3 | B.1.617.3 | 0.008955 |
ORF1ab/nsp3 | 560 | M560I | atG | atT | 3 | 3 | B.1.623 | 0.001609 |
ORF1ab/nsp3 | 560 | M560I | atG | atT | 2 | 3 | B.3 | 0.001661 |
ORF1ab/nsp3 | 560 | M560I | atG | atC | 1 | 3 | B.3 | 0.000831 |
ORF1ab/nsp3 | 560 | M560I | atG | atT | 3 | 3 | P.1.15 | 0.000697 |
ORF1ab/nsp3 | 560 | M560I | atG | atT | 2 | 3 | P.2 | 0.000373 |
ORF1ab/nsp3 | 560 | M560I | atG | atC | 1 | 3 | P.2 | 0.000187 |
ORF1ab/nsp3 | 560 | M560N | aTG | aAT | 2 | 2 | All | 0 |
ORF1ab/nsp3 | 560 | M560del2 | ATG | --T | 1 | 2 | All | 0 |
ORF1ab/nsp3 | 560 | M560del2 | ATg | --g | 1 | 2 | All | 0 |
ORF1ab/nsp3 | 560 | M560I | atG | atT | 2 | 2 | AY.109 | 0.001479 |
ORF1ab/nsp3 | 560 | M560I | atG | atT | 2 | 2 | AY.110 | 0.000225 |
ORF1ab/nsp3 | 560 | M560I | atG | atT | 2 | 2 | AY.114 | 0.000462 |
ORF1ab/nsp3 | 560 | M560I | atG | atT | 2 | 2 | AY.116 | 0.000574 |
ORF1ab/nsp3 | 560 | M560I | atG | atT | 2 | 2 | AY.12 | 0.000632 |
ORF1ab/nsp3 | 560 | M560I | atG | atT | 2 | 2 | AY.16.1 | 0.00094 |
ORF1ab/nsp3 | 560 | M560I | atG | atT | 2 | 2 | AY.3.1 | 0.000171 |
ORF1ab/nsp3 | 560 | M560I | atG | atT | 2 | 2 | AY.37 | 0.000632 |
ORF1ab/nsp3 | 560 | M560I | atG | atT | 2 | 2 | AY.4.3 | 0.001684 |
ORF1ab/nsp3 | 560 | M560I | atG | atT | 2 | 2 | AY.4.5 | 0.000215 |
ORF1ab/nsp3 | 560 | M560I | atG | atT | 2 | 2 | AY.51 | 0.001818 |
ORF1ab/nsp3 | 560 | M560F | AtG | TtT | 2 | 2 | AY.55 | 0.001835 |
ORF1ab/nsp3 | 560 | M560I | atG | atT | 2 | 2 | AY.70 | 0.000417 |
ORF1ab/nsp3 | 560 | M560I | atG | atT | 2 | 2 | AY.75 | 0.000112 |
ORF1ab/nsp3 | 560 | M560I | atG | atT | 2 | 2 | AY.78 | 0.003082 |
ORF1ab/nsp3 | 560 | M560I | atG | atT | 2 | 2 | AY.89 | 0.009804 |
ORF1ab/nsp3 | 560 | M560I | atG | atT | 2 | 2 | B | 0.000256 |
ORF1ab/nsp3 | 560 | M560V | Atg | Gtg | 2 | 2 | B.1 | 0.000018 |
ORF1ab/nsp3 | 560 | M560T | aTg | aCg | 1 | 2 | B.1 | 0.000009 |
ORF1ab/nsp3 | 560 | M560T | aTG | aCC | 1 | 2 | B.1 | 0.000009 |
ORF1ab/nsp3 | 560 | M560I | atG | atT | 2 | 2 | B.1.1.284 | 0.000215 |
ORF1ab/nsp3 | 560 | M560L | Atg | Ctg | 2 | 2 | B.1.1.337 | 0.007194 |
ORF1ab/nsp3 | 560 | M560I | atG | atT | 2 | 2 | B.1.1.354 | 0.008772 |
ORF1ab/nsp3 | 560 | M560K | aTg | aAg | 2 | 2 | B.1.1.7 | 0.000002 |
ORF1ab/nsp3 | 560 | M560N | aTG | aAT | 2 | 2 | B.1.1.7 | 0.000002 |
ORF1ab/nsp3 | 560 | M560T | aTg | aCg | 2 | 2 | B.1.1.7 | 0.000002 |
ORF1ab/nsp3 | 560 | M560del1 | atG | at- | 2 | 2 | B.1.1.7 | 0.000002 |
ORF1ab/nsp3 | 560 | M560L | Atg | Ctg | 1 | 2 | B.1.1.7 | 0.000001 |
ORF1ab/nsp3 | 560 | M560L | Atg | Ttg | 1 | 2 | B.1.1.7 | 0.000001 |
ORF1ab/nsp3 | 560 | M560I | atG | atT | 2 | 2 | B.1.177.32 | 0.002699 |
ORF1ab/nsp3 | 560 | M560I | atG | atT | 2 | 2 | B.1.177.35 | 0.001382 |
ORF1ab/nsp3 | 560 | M560I | atG | atT | 2 | 2 | B.1.177.57 | 0.000562 |
ORF1ab/nsp3 | 560 | M560I | atG | atT | 2 | 2 | B.1.258.17 | 0.000208 |
ORF1ab/nsp3 | 560 | M560I | atG | atT | 2 | 2 | B.1.380 | 0.013245 |
ORF1ab/nsp3 | 560 | M560I | atG | atT | 2 | 2 | B.1.389 | 0.002004 |
ORF1ab/nsp3 | 560 | M560I | atG | atT | 2 | 2 | B.1.404 | 0.002604 |
ORF1ab/nsp3 | 560 | M560T | aTg | aCg | 2 | 2 | B.1.429 | 0.000047 |
ORF1ab/nsp3 | 560 | M560I | atG | atT | 2 | 2 | B.1.459 | 0.008163 |
ORF1ab/nsp3 | 560 | M560V | Atg | Gtg | 2 | 2 | B.1.617.2 | 0.000008 |
ORF1ab/nsp3 | 560 | M560I | atG | atC | 2 | 2 | B.4.7 | 0.020202 |
ORF1ab/nsp3 | 560 | M560V | Atg | Gtg | 2 | 2 | D.2 | 0.00015 |
ORF1ab/nsp3 | 560 | M560I | atG | atT | 2 | 2 | P.1.17 | 0.000324 |
ORF1ab/nsp3 | 560 | M560I | atG | atT | 2 | 2 | P.4 | 0.007605 |
ORF1ab/nsp3 | 560 | M560I | atG | atT | 1 | 1 | A.16 | 0.016129 |
ORF1ab/nsp3 | 560 | M560I | atG | atT | 1 | 1 | A.2.2 | 0.001689 |
ORF1ab/nsp3 | 560 | M560I | atG | atT | 1 | 1 | AE.8 | 0.000489 |
ORF1ab/nsp3 | 560 | M560R | aTg | aGg | 1 | 1 | All | 0 |
ORF1ab/nsp3 | 560 | M560V | Atg | Gtg | 1 | 1 | AT.1 | 0.005128 |
ORF1ab/nsp3 | 560 | M560I | atG | atT | 1 | 1 | AY.10 | 0.00053 |
ORF1ab/nsp3 | 560 | M560I | atG | atT | 1 | 1 | AY.105 | 0.000643 |
ORF1ab/nsp3 | 560 | M560I | atG | atT | 1 | 1 | AY.11 | 0.001339 |
ORF1ab/nsp3 | 560 | M560del | ATG | --- | 1 | 1 | AY.111 | 0.000183 |
ORF1ab/nsp3 | 560 | M560I | atG | atT | 1 | 1 | AY.113 | 0.000142 |
ORF1ab/nsp3 | 560 | M560V | Atg | Gtg | 1 | 1 | AY.115 | 0.005208 |
ORF1ab/nsp3 | 560 | M560I | atG | atA | 1 | 1 | AY.14 | 0.000088 |
ORF1ab/nsp3 | 560 | M560T | aTg | aCg | 1 | 1 | AY.20 | 0.000039 |
ORF1ab/nsp3 | 560 | M560del1 | atG | at- | 1 | 1 | AY.24 | 0.000431 |
ORF1ab/nsp3 | 560 | M560del | ATG | --- | 1 | 1 | AY.25 | 0.000006 |
ORF1ab/nsp3 | 560 | M560L | Atg | Ctg | 1 | 1 | AY.27 | 0.000065 |
ORF1ab/nsp3 | 560 | M560I | atG | atT | 1 | 1 | AY.30 | 0.000396 |
ORF1ab/nsp3 | 560 | M560I | atG | atT | 1 | 1 | AY.36 | 0.000148 |
ORF1ab/nsp3 | 560 | M560V | Atg | Gtg | 1 | 1 | AY.38 | 0.000499 |
ORF1ab/nsp3 | 560 | M560I | atG | atT | 1 | 1 | AY.39.1 | 0.00004 |
ORF1ab/nsp3 | 560 | M560L | Atg | Ttg | 1 | 1 | AY.39.1 | 0.00004 |
ORF1ab/nsp3 | 560 | M560del | ATG | --- | 1 | 1 | AY.43 | 0.000004 |
ORF1ab/nsp3 | 560 | M560V | Atg | Gtg | 1 | 1 | AY.44 | 0.000006 |
ORF1ab/nsp3 | 560 | M560L | Atg | Ctg | 1 | 1 | AY.44 | 0.000006 |
ORF1ab/nsp3 | 560 | M560V | Atg | Gtg | 1 | 1 | AY.45 | 0.000122 |
ORF1ab/nsp3 | 560 | M560I | atG | atT | 1 | 1 | AY.46.5 | 0.000198 |
ORF1ab/nsp3 | 560 | M560I | atG | atT | 1 | 1 | AY.48 | 0.000465 |
ORF1ab/nsp3 | 560 | M560I | atG | atT | 1 | 1 | AY.50 | 0.000799 |
ORF1ab/nsp3 | 560 | M560V | Atg | Gtg | 1 | 1 | AY.52 | 0.000814 |
ORF1ab/nsp3 | 560 | M560I | atG | atT | 1 | 1 | AY.58 | 0.000907 |
ORF1ab/nsp3 | 560 | M560I | atG | atT | 1 | 1 | AY.62 | 0.000436 |
ORF1ab/nsp3 | 560 | M560I | atG | atT | 1 | 1 | AY.63 | 0.000387 |
ORF1ab/nsp3 | 560 | M560del | ATG | --- | 1 | 1 | AY.65 | 0.000533 |
ORF1ab/nsp3 | 560 | M560del | ATG | --- | 1 | 1 | AY.67 | 0.000464 |
ORF1ab/nsp3 | 560 | M560I | atG | atT | 1 | 1 | AY.71 | 0.000475 |
ORF1ab/nsp3 | 560 | M560I | atG | atT | 1 | 1 | AY.73 | 0.000665 |
ORF1ab/nsp3 | 560 | M560L | Atg | Ctg | 1 | 1 | AY.75 | 0.000056 |
ORF1ab/nsp3 | 560 | M560I | atG | atT | 1 | 1 | AY.82 | 0.001357 |
ORF1ab/nsp3 | 560 | M560I | atG | atT | 1 | 1 | AY.9 | 0.000068 |
ORF1ab/nsp3 | 560 | M560I | atG | atT | 1 | 1 | AY.92 | 0.000287 |
ORF1ab/nsp3 | 560 | M560I | atG | atT | 1 | 1 | AY.94 | 0.000443 |
ORF1ab/nsp3 | 560 | M560L | Atg | Ctg | 1 | 1 | AY.95 | 0.000761 |
ORF1ab/nsp3 | 560 | M560L | Atg | Ctg | 1 | 1 | AY.98.1 | 0.000048 |
ORF1ab/nsp3 | 560 | M560I | atG | atT | 1 | 1 | AZ.2 | 0.000821 |
ORF1ab/nsp3 | 560 | M560del1 | atG | at- | 1 | 1 | B.1 | 0.000009 |
ORF1ab/nsp3 | 560 | M560F | AtG | TtT | 1 | 1 | B.1 | 0.000009 |
ORF1ab/nsp3 | 560 | M560del | ATG | --- | 1 | 1 | B.1 | 0.000009 |
ORF1ab/nsp3 | 560 | M560del | ATG | --- | 1 | 1 | B.1.1 | 0.000018 |
ORF1ab/nsp3 | 560 | M560K | aTg | aAg | 1 | 1 | B.1.1 | 0.000018 |
ORF1ab/nsp3 | 560 | M560del | ATG | --- | 1 | 1 | B.1.1.1 | 0.000327 |
ORF1ab/nsp3 | 560 | M560I | atG | atT | 1 | 1 | B.1.1.189 | 0.001513 |
ORF1ab/nsp3 | 560 | M560I | atG | atT | 1 | 1 | B.1.1.216 | 0.00089 |
ORF1ab/nsp3 | 560 | M560I | atG | atT | 1 | 1 | B.1.1.266 | 0.012195 |
ORF1ab/nsp3 | 560 | M560I | atG | atT | 1 | 1 | B.1.1.273 | 0.006757 |
ORF1ab/nsp3 | 560 | M560I | atG | atA | 1 | 1 | B.1.1.274 | 0.005051 |
ORF1ab/nsp3 | 560 | M560I | atG | atT | 1 | 1 | B.1.1.286 | 0.002899 |
ORF1ab/nsp3 | 560 | M560I | atG | atT | 1 | 1 | B.1.1.294 | 0.001266 |
ORF1ab/nsp3 | 560 | M560I | atG | atT | 1 | 1 | B.1.1.306 | 0.000438 |
ORF1ab/nsp3 | 560 | M560del | ATG | --- | 1 | 1 | B.1.1.311 | 0.000358 |
ORF1ab/nsp3 | 560 | M560I | atG | atT | 1 | 1 | B.1.1.316 | 0.000925 |
ORF1ab/nsp3 | 560 | M560I | atG | atT | 1 | 1 | B.1.1.326 | 0.001761 |
ORF1ab/nsp3 | 560 | M560I | atG | atT | 1 | 1 | B.1.1.33 | 0.000421 |
ORF1ab/nsp3 | 560 | M560I | atG | atT | 1 | 1 | B.1.1.34 | 0.013158 |
ORF1ab/nsp3 | 560 | M560I | atG | atT | 1 | 1 | B.1.1.344 | 0.010753 |
ORF1ab/nsp3 | 560 | M560I | atG | atA | 1 | 1 | B.1.1.369 | 0.000446 |
ORF1ab/nsp3 | 560 | M560I | atG | atT | 1 | 1 | B.1.1.416 | 0.000905 |
ORF1ab/nsp3 | 560 | M560I | atG | atT | 1 | 1 | B.1.1.420 | 0.001006 |
ORF1ab/nsp3 | 560 | M560I | atG | atT | 1 | 1 | B.1.1.442 | 0.018519 |
ORF1ab/nsp3 | 560 | M560I | atG | atT | 1 | 1 | B.1.1.462 | 0.008621 |
ORF1ab/nsp3 | 560 | M560I | atG | atT | 1 | 1 | B.1.1.464 | 0.001473 |
ORF1ab/nsp3 | 560 | M560I | atG | atT | 1 | 1 | B.1.1.47 | 0.005348 |
ORF1ab/nsp3 | 560 | M560I | atG | atT | 1 | 1 | B.1.1.485 | 0.016667 |
ORF1ab/nsp3 | 560 | M560I | atG | atT | 1 | 1 | B.1.1.486 | 0.001577 |
ORF1ab/nsp3 | 560 | M560del | ATG | --- | 1 | 1 | B.1.1.519 | 0.00004 |
ORF1ab/nsp3 | 560 | M560I | atG | atT | 1 | 1 | B.1.1.54 | 0.003021 |
ORF1ab/nsp3 | 560 | M560del2 | ATG | --T | 1 | 1 | B.1.1.7 | 0.000001 |
ORF1ab/nsp3 | 560 | M560I | atG | atT | 1 | 1 | B.1.120 | 0.007692 |
ORF1ab/nsp3 | 560 | M560I | atG | atT | 1 | 1 | B.1.124 | 0.007812 |
ORF1ab/nsp3 | 560 | M560I | atG | atT | 1 | 1 | B.1.158 | 0.02381 |
ORF1ab/nsp3 | 560 | M560del | ATG | --- | 1 | 1 | B.1.160 | 0.000031 |
ORF1ab/nsp3 | 560 | M560I | atG | atT | 1 | 1 | B.1.160.12 | 0.00641 |
ORF1ab/nsp3 | 560 | M560I | atG | atT | 1 | 1 | B.1.160.23 | 0.004831 |
ORF1ab/nsp3 | 560 | M560I | atG | atT | 1 | 1 | B.1.160.8 | 0.001289 |
ORF1ab/nsp3 | 560 | M560I | atG | atT | 1 | 1 | B.1.160.9 | 0.007194 |
ORF1ab/nsp3 | 560 | M560L | Atg | Ttg | 1 | 1 | B.1.177 | 0.000013 |
ORF1ab/nsp3 | 560 | M560I | atG | atT | 1 | 1 | B.1.177.18 | 0.00116 |
ORF1ab/nsp3 | 560 | M560I | atG | atT | 1 | 1 | B.1.177.23 | 0.003236 |
ORF1ab/nsp3 | 560 | M560I | atG | atT | 1 | 1 | B.1.177.4 | 0.000211 |
ORF1ab/nsp3 | 560 | M560I | atG | atT | 1 | 1 | B.1.177.58 | 0.001332 |
ORF1ab/nsp3 | 560 | M560I | atG | atT | 1 | 1 | B.1.177.6 | 0.000977 |
ORF1ab/nsp3 | 560 | M560I | atG | atT | 1 | 1 | B.1.177.7 | 0.000165 |
ORF1ab/nsp3 | 560 | M560I | atG | atT | 1 | 1 | B.1.177.73 | 0.000566 |
ORF1ab/nsp3 | 560 | M560T | aTg | aCg | 1 | 1 | B.1.177.77 | 0.000726 |
ORF1ab/nsp3 | 560 | M560I | atG | atT | 1 | 1 | B.1.195 | 0.005025 |
ORF1ab/nsp3 | 560 | M560I | atG | atT | 1 | 1 | B.1.206 | 0.000816 |
ORF1ab/nsp3 | 560 | M560I | atG | atT | 1 | 1 | B.1.208 | 0.04 |
ORF1ab/nsp3 | 560 | M560I | atG | atT | 1 | 1 | B.1.214.2 | 0.0006 |
ORF1ab/nsp3 | 560 | M560I | atG | atT | 1 | 1 | B.1.232 | 0.000537 |
ORF1ab/nsp3 | 560 | M560I | atG | atC | 1 | 1 | B.1.258.4 | 0.003448 |
ORF1ab/nsp3 | 560 | M560L | Atg | Ttg | 1 | 1 | B.1.258.7 | 0.001912 |
ORF1ab/nsp3 | 560 | M560I | atG | atT | 1 | 1 | B.1.3 | 0.002618 |
ORF1ab/nsp3 | 560 | M560I | atG | atT | 1 | 1 | B.1.311 | 0.000275 |
ORF1ab/nsp3 | 560 | M560I | atG | atT | 1 | 1 | B.1.320 | 0.001245 |
ORF1ab/nsp3 | 560 | M560del1 | atG | at- | 1 | 1 | B.1.330 | 0.028571 |
ORF1ab/nsp3 | 560 | M560del | ATG | --- | 1 | 1 | B.1.351 | 0.00003 |
ORF1ab/nsp3 | 560 | M560I | atG | atT | 1 | 1 | B.1.351.2 | 0.000303 |
ORF1ab/nsp3 | 560 | M560I | atG | atT | 1 | 1 | B.1.356 | 0.001727 |
ORF1ab/nsp3 | 560 | M560del | ATG | --- | 1 | 1 | B.1.36 | 0.000146 |
ORF1ab/nsp3 | 560 | M560I | atG | atT | 1 | 1 | B.1.36.29 | 0.000517 |
ORF1ab/nsp3 | 560 | M560del | ATG | --- | 1 | 1 | B.1.36.29 | 0.000517 |
ORF1ab/nsp3 | 560 | M560I | atG | atT | 1 | 1 | B.1.367 | 0.000792 |
ORF1ab/nsp3 | 560 | M560del2 | ATg | --g | 1 | 1 | B.1.369 | 0.000285 |
ORF1ab/nsp3 | 560 | M560I | atG | atT | 1 | 1 | B.1.369 | 0.000285 |
ORF1ab/nsp3 | 560 | M560L | Atg | Ttg | 1 | 1 | B.1.452 | 0.013699 |
ORF1ab/nsp3 | 560 | M560I | atG | atT | 1 | 1 | B.1.456 | 0.003268 |
ORF1ab/nsp3 | 560 | M560I | atG | atT | 1 | 1 | B.1.466.2 | 0.000391 |
ORF1ab/nsp3 | 560 | M560V | Atg | Gtg | 1 | 1 | B.1.466.2 | 0.000391 |
ORF1ab/nsp3 | 560 | M560I | atG | atT | 1 | 1 | B.1.468 | 0.005714 |
ORF1ab/nsp3 | 560 | M560L | Atg | Ctg | 1 | 1 | B.1.525 | 0.000113 |
ORF1ab/nsp3 | 560 | M560L | Atg | Ttg | 1 | 1 | B.1.526 | 0.000024 |
ORF1ab/nsp3 | 560 | M560F | AtG | TtT | 1 | 1 | B.1.526 | 0.000024 |
ORF1ab/nsp3 | 560 | M560I | atG | atT | 1 | 1 | B.1.538 | 0.008065 |
ORF1ab/nsp3 | 560 | M560I | atG | atT | 1 | 1 | B.1.545 | 0.014493 |
ORF1ab/nsp3 | 560 | M560I | atG | atT | 1 | 1 | B.1.560 | 0.00463 |
ORF1ab/nsp3 | 560 | M560I | atG | atT | 1 | 1 | B.1.565 | 0.00081 |
ORF1ab/nsp3 | 560 | M560I | atG | atT | 1 | 1 | B.1.589 | 0.007576 |
ORF1ab/nsp3 | 560 | M560I | atG | atT | 1 | 1 | B.1.590 | 0.004545 |
ORF1ab/nsp3 | 560 | M560I | atG | atT | 1 | 1 | B.1.595.3 | 0.026316 |
ORF1ab/nsp3 | 560 | M560I | atG | atT | 1 | 1 | B.1.610 | 0.003546 |
ORF1ab/nsp3 | 560 | M560T | aTg | aCg | 1 | 1 | B.1.617.2 | 0.000004 |
ORF1ab/nsp3 | 560 | M560I | atG | atT | 1 | 1 | B.1.618 | 0.004032 |
ORF1ab/nsp3 | 560 | M560I | atG | atT | 1 | 1 | B.1.626 | 0.005714 |
ORF1ab/nsp3 | 560 | M560I | atG | atT | 1 | 1 | B.1.628 | 0.000352 |
ORF1ab/nsp3 | 560 | M560I | atG | atT | 1 | 1 | B.1.636 | 0.006711 |
ORF1ab/nsp3 | 560 | M560I | atG | atT | 1 | 1 | B.10 | 0.008264 |
ORF1ab/nsp3 | 560 | M560I | atG | atT | 1 | 1 | B.3.1 | 0.001658 |
ORF1ab/nsp3 | 560 | M560I | atG | atA | 1 | 1 | B.35 | 0.007812 |
ORF1ab/nsp3 | 560 | M560I | atG | atT | 1 | 1 | C.17 | 0.055556 |
ORF1ab/nsp3 | 560 | M560del1 | atG | at- | 1 | 1 | D.2 | 0.000075 |
ORF1ab/nsp3 | 560 | M560I | atG | atC | 1 | 1 | D.3 | 0.005917 |
ORF1ab/nsp3 | 560 | M560I | atG | atT | 1 | 1 | N.5 | 0.001767 |
ORF1ab/nsp3 | 560 | M560R | aTg | aGg | 1 | 1 | P.1.14 | 0.000048 |
ORF1ab/nsp3 | 560 | M560I | atG | atT | 1 | 1 | P.1.17.1 | 0.000875 |
ORF1ab/nsp3 | 560 | M560I | atG | atT | 1 | 1 | P.1.5 | 0.076923 |
ORF1ab/nsp3 | 560 | M560I | atG | atT | 1 | 1 | P.1.6 | 0.001946 |
ORF1ab/nsp3 | 560 | M560I | atG | atT | 1 | 1 | P.1.7 | 0.000319 |
ORF1ab/nsp3 | 560 | M560I | atG | atT | 1 | 1 | P.1.8 | 0.004785 |
ORF1ab/nsp3 | 560 | M560I | atG | atT | 1 | 1 | P.1.9 | 0.004808 |
ORF1ab/nsp3 | 560 | M560I | atG | atT | 1 | 1 | Q.1 | 0.000126 |
CoV-GLUE is still in development. CoV-GLUE was originally developed as part of COG-UK by Josh Singer using the GLUE framework at the MRC-University of Glasgow Centre for Virus Research (CVR). In 2021 it was redeveloped by Richard Orton to scale to the millions of genome sequences available. We acknowledge support from the MRC (MC_UU_12014/12), WT (220977/Z/20/Z) and UKRI G2P (MR/W005611/1). Please contact Richard Orton with any queries: Richard.Orton@glasgow.ac.uk
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