CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF1ab/nsp3 : CodonNum = 550 & Codon = ctG

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF1ab/nsp3550L550LL1368LsynctTctG804160.01990054367-4369

Details of the mutation no within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF1ab/nsp3550L550LctTctG16804All0.000003
ORF1ab/nsp3550L550LctTctG271AY.430.000009
ORF1ab/nsp3550L550LctTctG124B.10.000009
ORF1ab/nsp3550L550LctTctG116B.1.1.70.000001
ORF1ab/nsp3550L550LctTctG26AY.250.000012
ORF1ab/nsp3550L550LctTctG15B.1.20.000009
ORF1ab/nsp3550L550LctTctG12AY.270.000065
ORF1ab/nsp3550L550LctTctG12AY.46.60.000072
ORF1ab/nsp3550L550LctTctG22B.1.466.20.000782
ORF1ab/nsp3550L550LctTctG11AY.3.10.000085
ORF1ab/nsp3550L550LctTctG11B.1.10.000018
ORF1ab/nsp3550L550LctTctG11B.1.1.1740.003378
ORF1ab/nsp3550L550LctTctG11B.1.5970.00463
ORF1ab/nsp3550L550LctTctG11D.20.000075