CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF1ab/nsp3 : CodonNum = 550 & Codon = ctC

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF1ab/nsp3550L550LL1368LsynctTctC8045560.6915424367-4369

Details of the mutation no within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF1ab/nsp3550L550LctTctC556804All0.000106
ORF1ab/nsp3550L550LctTctC323323B.1.1.2800.996914
ORF1ab/nsp3550L550LctTctC9104AY.1030.000056
ORF1ab/nsp3550L550LctTctC271AY.430.000009
ORF1ab/nsp3550L550LctTctC5660AY.30.000557
ORF1ab/nsp3550L550LctTctC5656AY.1110.010256
ORF1ab/nsp3550L550LctTctC2224B.10.000202
ORF1ab/nsp3550L550LctTctC916B.1.1.70.000008
ORF1ab/nsp3550L550LctTctC914AY.40.000014
ORF1ab/nsp3550L550LctTctC1313AY.5.40.003597
ORF1ab/nsp3550L550LctTctC26AY.250.000012
ORF1ab/nsp3550L550LctTctC55AD.20.001095
ORF1ab/nsp3550L550LctTctC45B.1.20.000035
ORF1ab/nsp3550L550LctTctC55B.1.5750.001517
ORF1ab/nsp3550L550LctTctC34AY.330.0002
ORF1ab/nsp3550L550LctTctC14AY.350.000233
ORF1ab/nsp3550L550LctTctC44B.1.177.810.000757
ORF1ab/nsp3550L550LctTctC33B.1.360.000438
ORF1ab/nsp3550L550LctTctC33B.1.4700.004213
ORF1ab/nsp3550L550LctTctC33B.1.617.20.000011
ORF1ab/nsp3550L550LctTctC13C.370.000116
ORF1ab/nsp3550L550LctTctC22AY.240.000862
ORF1ab/nsp3550L550LctTctC22AY.370.000632
ORF1ab/nsp3550L550LctTctC12AY.46.60.000072
ORF1ab/nsp3550L550LctTctC22B.1.1.330.000842
ORF1ab/nsp3550L550LctTctC22B.1.1770.000026
ORF1ab/nsp3550L550LctTctC12B.1.258.170.000104
ORF1ab/nsp3550L550LctTctC22P.10.000032
ORF1ab/nsp3550L550LctTctC11AU.20.002421
ORF1ab/nsp3550L550LctTctC11AY.1020.000027
ORF1ab/nsp3550L550LctTctC11AY.4.50.000107
ORF1ab/nsp3550L550LctTctC11AY.460.000104
ORF1ab/nsp3550L550LctTctC11AY.480.000465
ORF1ab/nsp3550L550LctTctC11AY.660.00107
ORF1ab/nsp3550L550LctTctC11AY.920.000287
ORF1ab/nsp3550L550LctTctC11B.1.177.60.000977
ORF1ab/nsp3550L550LctTctC11B.1.177.600.000218
ORF1ab/nsp3550L550LctTctC11B.1.177.860.000183
ORF1ab/nsp3550L550LctTctC11B.1.5960.000087