CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF1ab/nsp3 : CodonNum = 545 & Codon = gaT

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF1ab/nsp3545E545DE1363DnonsyngaGgaT3343260.9760484352-4354

Details of the mutation no within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF1ab/nsp3545E545DgaGgaT326334All0.000062
ORF1ab/nsp3545E545DgaGgaT4040B.1.1110.047004
ORF1ab/nsp3545E545DgaGgaT3333B.1.4740.062738
ORF1ab/nsp3545E545DgaGgaT2828AY.330.00187
ORF1ab/nsp3545E545DgaGgaT2728B.1.617.20.000102
ORF1ab/nsp3545E545DgaGgaT2626B.1.4270.001313
ORF1ab/nsp3545E545DgaGgaT2222B.10.000202
ORF1ab/nsp3545E545DgaGgaT1111B.1.1.70.00001
ORF1ab/nsp3545E545DgaGgaT1111B.1.2430.000765
ORF1ab/nsp3545E545DgaGgaT910B.1.20.000079
ORF1ab/nsp3545E545DgaGgaT38AY.1020.00008
ORF1ab/nsp3545E545DgaGgaT88AY.40.000012
ORF1ab/nsp3545E545DgaGgaT77AY.1030.000043
ORF1ab/nsp3545E545DgaGgaT77AY.1200.00026
ORF1ab/nsp3545E545DgaGgaT77B.1.10.000127
ORF1ab/nsp3545E545DgaGgaT77B.1.4290.000165
ORF1ab/nsp3545E545DgaGgaT66AY.430.000027
ORF1ab/nsp3545E545DgaGgaT66AY.440.000037
ORF1ab/nsp3545E545DgaGgaT55B.1.1770.000066
ORF1ab/nsp3545E545DgaGgaT44AY.540.000381
ORF1ab/nsp3545E545DgaGgaT44AY.610.000419
ORF1ab/nsp3545E545DgaGgaT44B.1.4000.001716
ORF1ab/nsp3545E545DgaGgaT33AY.1000.000138
ORF1ab/nsp3545E545DgaGgaT33AY.250.000018
ORF1ab/nsp3545E545DgaGgaT33AY.99.20.000276
ORF1ab/nsp3545E545DgaGgaT22AY.1070.000932
ORF1ab/nsp3545E545DgaGgaT22AY.160.000759
ORF1ab/nsp3545E545DgaGgaT22AY.30.00002
ORF1ab/nsp3545E545DgaGgaT22AY.390.000049
ORF1ab/nsp3545E545DgaGgaT22AY.470.000062
ORF1ab/nsp3545E545DgaGgaT22AY.690.000373
ORF1ab/nsp3545E545DgaGgaT22B.1.1.3180.000604
ORF1ab/nsp3545E545DgaGgaT22P.20.000373
ORF1ab/nsp3545E545DgaGgaT11AY.1170.000085
ORF1ab/nsp3545E545DgaGgaT11AY.1180.000063
ORF1ab/nsp3545E545DgaGgaT11AY.16.10.00047
ORF1ab/nsp3545E545DgaGgaT11AY.200.000039
ORF1ab/nsp3545E545DgaGgaT11AY.270.000065
ORF1ab/nsp3545E545DgaGgaT11AY.4.20.000022
ORF1ab/nsp3545E545DgaGgaT11AY.400.000964
ORF1ab/nsp3545E545DgaGgaT11AY.50.000021
ORF1ab/nsp3545E545DgaGgaT11AY.550.000917
ORF1ab/nsp3545E545DgaGgaT11AY.7.10.000113
ORF1ab/nsp3545E545DgaGgaT11AY.9.2.10.001976
ORF1ab/nsp3545E545DgaGgaT11AY.990.001049
ORF1ab/nsp3545E545DgaGgaT11B0.000128
ORF1ab/nsp3545E545DgaGgaT11B.1.1.2220.000204
ORF1ab/nsp3545E545DgaGgaT11B.1.1.3480.000796
ORF1ab/nsp3545E545DgaGgaT11B.1.1.3890.006061
ORF1ab/nsp3545E545DgaGgaT11B.1.1.5190.00004
ORF1ab/nsp3545E545DgaGgaT11B.1.177.600.000218
ORF1ab/nsp3545E545DgaGgaT11B.1.36.180.00042
ORF1ab/nsp3545E545DgaGgaT11B.1.5330.009615
ORF1ab/nsp3545E545DgaGgaT11B.1.617.10.000129
ORF1ab/nsp3545E545DgaGgaT11B.1.6230.000536
ORF1ab/nsp3545E545DgaGgaT11B.550.00295
ORF1ab/nsp3545E545DgaGgaT11C.36.30.000567
ORF1ab/nsp3545E545DgaGgaT11P.10.000016
ORF1ab/nsp3545E545DgaGgaT11Q.40.000455