CoV-GLUE | Mutations | Mutation
Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):
ORF | CodonNum | Mut | ORF1abMut | MutType | RefCodon | MutCodon | AACount | CodonCount | CodonProp | Genome Position |
ORF1ab/nsp3 | 534 | A534A | A1352A | syn | gcC | gcT | 33991 | 33600 | 0.988497 | 4319-4321 |
Details of the mutation no within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):
ORF | CodonNum | Mut | RefCodon | MutCodon | CodonCount | AACount | Lineage | LineageCodonProp |
ORF1ab/nsp3 | 534 | A534A | gcC | gcT | 33600 | 33991 | All | 0.006426 |
ORF1ab/nsp3 | 534 | A534A | gcC | gcT | 11812 | 11812 | AY.118 | 0.740008 |
ORF1ab/nsp3 | 534 | A534A | gcC | gcT | 11787 | 11788 | AY.9.1 | 0.986855 |
ORF1ab/nsp3 | 534 | A534A | gcC | gcT | 3427 | 3655 | AY.4 | 0.005334 |
ORF1ab/nsp3 | 534 | A534A | gcC | gcT | 1352 | 1365 | B.1.1.7 | 0.00121 |
ORF1ab/nsp3 | 534 | A534A | gcC | gcT | 1154 | 1154 | AY.63 | 0.446422 |
ORF1ab/nsp3 | 534 | A534A | gcC | gcT | 377 | 377 | AY.48 | 0.175349 |
ORF1ab/nsp3 | 534 | A534A | gcC | gcT | 278 | 296 | B.1.617.2 | 0.001047 |
ORF1ab/nsp3 | 534 | A534A | gcC | gcT | 291 | 291 | AY.9.2 | 0.010688 |
ORF1ab/nsp3 | 534 | A534A | gcC | gcT | 259 | 259 | AY.103 | 0.001608 |
ORF1ab/nsp3 | 534 | A534A | gcC | gcT | 172 | 172 | B.1.2 | 0.001515 |
ORF1ab/nsp3 | 534 | A534A | gcC | gcT | 149 | 150 | AY.25 | 0.000896 |
ORF1ab/nsp3 | 534 | A534A | gcC | gcT | 122 | 126 | AY.43 | 0.000541 |
ORF1ab/nsp3 | 534 | A534A | gcC | gcT | 119 | 119 | AY.119 | 0.004202 |
ORF1ab/nsp3 | 534 | A534A | gcC | gcT | 114 | 116 | B.1.177 | 0.001501 |
ORF1ab/nsp3 | 534 | A534A | gcC | gcT | 101 | 101 | AY.44 | 0.000615 |
ORF1ab/nsp3 | 534 | A534A | gcC | gcT | 86 | 86 | B.1.1.214 | 0.004769 |
ORF1ab/nsp3 | 534 | A534A | gcC | gcT | 77 | 80 | B.1 | 0.000705 |
ORF1ab/nsp3 | 534 | A534A | gcC | gcT | 79 | 79 | B.1.526 | 0.001857 |
ORF1ab/nsp3 | 534 | A534A | gcC | gcT | 74 | 74 | AY.39 | 0.001829 |
ORF1ab/nsp3 | 534 | A534A | gcC | gcT | 73 | 73 | AY.3 | 0.000726 |
ORF1ab/nsp3 | 534 | A534A | gcC | gcT | 72 | 72 | P.1.16 | 0.026936 |
ORF1ab/nsp3 | 534 | A534A | gcC | gcT | 62 | 62 | B.1.438.1 | 0.00665 |
ORF1ab/nsp3 | 534 | A534A | gcC | gcT | 60 | 60 | P.1 | 0.000945 |
ORF1ab/nsp3 | 534 | A534A | gcC | gcT | 59 | 59 | A.15 | 0.936508 |
ORF1ab/nsp3 | 534 | A534A | gcC | gcT | 54 | 54 | B.1.1 | 0.00098 |
ORF1ab/nsp3 | 534 | A534A | gcC | gcT | 53 | 53 | B.1.637 | 0.003873 |
ORF1ab/nsp3 | 534 | A534A | gcC | gcT | 49 | 49 | B.1.243 | 0.00341 |
ORF1ab/nsp3 | 534 | A534A | gcC | gcT | 44 | 45 | AY.102 | 0.001167 |
ORF1ab/nsp3 | 534 | A534A | gcC | gcT | 45 | 45 | B.1.234 | 0.005937 |
ORF1ab/nsp3 | 534 | A534A | gcC | gcT | 42 | 42 | C.37 | 0.004875 |
ORF1ab/nsp3 | 534 | A534A | gcC | gcT | 37 | 37 | B.1.147 | 0.027967 |
ORF1ab/nsp3 | 534 | A534A | gcC | gcT | 35 | 35 | B.1.243.1 | 0.777778 |
ORF1ab/nsp3 | 534 | A534A | gcC | gcT | 34 | 34 | B.1.1.1 | 0.011107 |
ORF1ab/nsp3 | 534 | A534A | gcC | gcT | 31 | 31 | A.2.5.2 | 0.048742 |
ORF1ab/nsp3 | 534 | A534A | gcC | gcT | 30 | 30 | R.1 | 0.0027 |
ORF1ab/nsp3 | 534 | A534A | gcC | gcT | 1 | 28 | AY.69 | 0.000187 |
ORF1ab/nsp3 | 534 | A534A | gcC | gcT | 23 | 28 | B.1.351 | 0.000684 |
ORF1ab/nsp3 | 534 | A534A | gcC | gcT | 5 | 28 | B.1.36 | 0.00073 |
ORF1ab/nsp3 | 534 | A534A | gcC | gcT | 27 | 27 | AY.26 | 0.000764 |
ORF1ab/nsp3 | 534 | A534A | gcC | gcT | 27 | 27 | B.1.258.14 | 0.026471 |
ORF1ab/nsp3 | 534 | A534A | gcC | gcT | 22 | 26 | B.1.525 | 0.00249 |
ORF1ab/nsp3 | 534 | A534A | gcC | gcT | 26 | 26 | B.1.542 | 0.8125 |
ORF1ab/nsp3 | 534 | A534A | gcC | gcT | 23 | 25 | AY.100 | 0.001058 |
ORF1ab/nsp3 | 534 | A534A | gcC | gcT | 25 | 25 | AY.110 | 0.002817 |
ORF1ab/nsp3 | 534 | A534A | gcC | gcT | 24 | 24 | AY.33 | 0.001603 |
ORF1ab/nsp3 | 534 | A534A | gcC | gcT | 24 | 24 | B.1.429 | 0.000565 |
ORF1ab/nsp3 | 534 | A534A | gcC | gcT | 23 | 23 | AY.20 | 0.000894 |
ORF1ab/nsp3 | 534 | A534A | gcC | gcT | 23 | 23 | AY.5 | 0.000475 |
ORF1ab/nsp3 | 534 | A534A | gcC | gcT | 22 | 22 | AY.111 | 0.004029 |
ORF1ab/nsp3 | 534 | A534A | gcC | gcT | 18 | 18 | AY.23 | 0.001255 |
ORF1ab/nsp3 | 534 | A534A | gcC | gcT | 18 | 18 | P.1.14 | 0.00086 |
ORF1ab/nsp3 | 534 | A534A | gcC | gcT | 17 | 17 | AY.34 | 0.001648 |
ORF1ab/nsp3 | 534 | A534A | gcC | gcT | 17 | 17 | AY.39.1 | 0.000673 |
ORF1ab/nsp3 | 534 | A534A | gcC | gcT | 16 | 16 | B.1.160 | 0.000499 |
ORF1ab/nsp3 | 534 | A534A | gcC | gcT | 14 | 14 | AY.98 | 0.001106 |
ORF1ab/nsp3 | 534 | A534A | gcC | gcT | 14 | 14 | AY.99.2 | 0.00129 |
ORF1ab/nsp3 | 534 | A534A | gcC | gcT | 14 | 14 | B.1.258 | 0.000932 |
ORF1ab/nsp3 | 534 | A534A | gcC | gcT | 1 | 12 | AT.1 | 0.005128 |
ORF1ab/nsp3 | 534 | A534A | gcC | gcT | 12 | 12 | P.1.4 | 0.011719 |
ORF1ab/nsp3 | 534 | A534A | gcC | gcT | 10 | 11 | AY.117 | 0.000845 |
ORF1ab/nsp3 | 534 | A534A | gcC | gcT | 11 | 11 | AY.29 | 0.000174 |
ORF1ab/nsp3 | 534 | A534A | gcC | gcT | 10 | 11 | AY.46 | 0.001041 |
ORF1ab/nsp3 | 534 | A534A | gcC | gcT | 11 | 11 | AY.98.1 | 0.000533 |
ORF1ab/nsp3 | 534 | A534A | gcC | gcT | 11 | 11 | B.1.1.37 | 0.002122 |
ORF1ab/nsp3 | 534 | A534A | gcC | gcT | 10 | 10 | AY.120 | 0.000372 |
ORF1ab/nsp3 | 534 | A534A | gcC | gcT | 10 | 10 | B.1.1.269 | 0.013532 |
ORF1ab/nsp3 | 534 | A534A | gcC | gcT | 10 | 10 | B.1.596 | 0.000871 |
ORF1ab/nsp3 | 534 | A534A | gcC | gcT | 7 | 10 | B.1.621 | 0.00062 |
ORF1ab/nsp3 | 534 | A534A | gcC | gcT | 9 | 9 | AY.42 | 0.000362 |
ORF1ab/nsp3 | 534 | A534A | gcC | gcT | 9 | 9 | AY.84 | 0.003937 |
ORF1ab/nsp3 | 534 | A534A | gcC | gcT | 9 | 9 | B.1.1.519 | 0.000357 |
ORF1ab/nsp3 | 534 | A534A | gcC | gcT | 9 | 9 | B.1.369 | 0.002567 |
ORF1ab/nsp3 | 534 | A534A | gcC | gcT | 8 | 8 | AY.105 | 0.005145 |
ORF1ab/nsp3 | 534 | A534A | gcC | gcT | 8 | 8 | AY.116 | 0.002294 |
ORF1ab/nsp3 | 534 | A534A | gcC | gcT | 8 | 8 | AY.121 | 0.001083 |
ORF1ab/nsp3 | 534 | A534A | gcC | gcT | 8 | 8 | AY.47 | 0.000249 |
ORF1ab/nsp3 | 534 | A534A | gcC | gcT | 8 | 8 | B.1.221 | 0.000568 |
ORF1ab/nsp3 | 534 | A534A | gcC | gcT | 8 | 8 | B.1.427 | 0.000404 |
ORF1ab/nsp3 | 534 | A534A | gcC | gcT | 8 | 8 | P.1.17 | 0.001294 |
ORF1ab/nsp3 | 534 | A534A | gcC | gcT | 7 | 7 | AY.4.2 | 0.000152 |
ORF1ab/nsp3 | 534 | A534A | gcC | gcT | 6 | 7 | AY.65 | 0.003198 |
ORF1ab/nsp3 | 534 | A534A | gcC | gcT | 7 | 7 | AY.85 | 0.00299 |
ORF1ab/nsp3 | 534 | A534A | gcC | gcT | 7 | 7 | AY.92 | 0.002011 |
ORF1ab/nsp3 | 534 | A534A | gcC | gcT | 6 | 6 | A.2.5 | 0.002994 |
ORF1ab/nsp3 | 534 | A534A | gcC | gcT | 6 | 6 | AY.45 | 0.00073 |
ORF1ab/nsp3 | 534 | A534A | gcC | gcT | 6 | 6 | AY.9 | 0.000406 |
ORF1ab/nsp3 | 534 | A534A | gcC | gcT | 6 | 6 | B.1.1.306 | 0.00263 |
ORF1ab/nsp3 | 534 | A534A | gcC | gcT | 6 | 6 | B.1.160.11 | 0.034286 |
ORF1ab/nsp3 | 534 | A534A | gcC | gcT | 6 | 6 | B.1.177.80 | 0.011472 |
ORF1ab/nsp3 | 534 | A534A | gcC | gcT | 6 | 6 | B.1.420 | 0.0625 |
ORF1ab/nsp3 | 534 | A534A | gcC | gcT | 6 | 6 | B.1.627 | 0.012121 |
ORF1ab/nsp3 | 534 | A534A | gcC | gcT | 6 | 6 | C.36.3 | 0.003403 |
ORF1ab/nsp3 | 534 | A534A | gcC | gcT | 5 | 5 | AY.12 | 0.00158 |
ORF1ab/nsp3 | 534 | A534A | gcC | gcT | 5 | 5 | AY.64 | 0.002976 |
ORF1ab/nsp3 | 534 | A534A | gcC | gcT | 5 | 5 | AY.71 | 0.002375 |
ORF1ab/nsp3 | 534 | A534A | gcC | gcT | 4 | 5 | B | 0.000511 |
ORF1ab/nsp3 | 534 | A534A | gcC | gcT | 5 | 5 | B.1.177.35 | 0.003455 |
ORF1ab/nsp3 | 534 | A534A | gcC | gcT | 5 | 5 | B.1.391 | 0.005637 |
ORF1ab/nsp3 | 534 | A534A | gcC | gcT | 5 | 5 | B.1.400 | 0.002145 |
ORF1ab/nsp3 | 534 | A534A | gcC | gcT | 4 | 5 | B.1.466.2 | 0.001565 |
ORF1ab/nsp3 | 534 | A534A | gcC | gcT | 5 | 5 | B.1.561 | 0.001985 |
ORF1ab/nsp3 | 534 | A534A | gcC | gcT | 4 | 4 | AY.3.1 | 0.000341 |
ORF1ab/nsp3 | 534 | A534A | gcC | gcT | 4 | 4 | AY.54 | 0.000381 |
ORF1ab/nsp3 | 534 | A534A | gcC | gcT | 4 | 4 | AY.6 | 0.000165 |
ORF1ab/nsp3 | 534 | A534A | gcC | gcT | 4 | 4 | AY.75 | 0.000224 |
ORF1ab/nsp3 | 534 | A534A | gcC | gcT | 2 | 4 | B.1.177.21 | 0.000153 |
ORF1ab/nsp3 | 534 | A534A | gcC | gcT | 4 | 4 | B.1.311 | 0.001098 |
ORF1ab/nsp3 | 534 | A534A | gcC | gcT | 3 | 4 | B.1.36.29 | 0.001552 |
ORF1ab/nsp3 | 534 | A534A | gcC | gcT | 4 | 4 | B.1.523 | 0.009804 |
ORF1ab/nsp3 | 534 | A534A | gcC | gcT | 4 | 4 | B.1.619 | 0.003484 |
ORF1ab/nsp3 | 534 | A534A | gcC | gcT | 4 | 4 | C.26 | 0.029412 |
ORF1ab/nsp3 | 534 | A534A | gcC | gcT | 4 | 4 | D.2 | 0.0003 |
ORF1ab/nsp3 | 534 | A534A | gcC | gcT | 2 | 3 | AD.2 | 0.000438 |
ORF1ab/nsp3 | 534 | A534A | gcC | gcT | 3 | 3 | AY.104 | 0.005952 |
ORF1ab/nsp3 | 534 | A534A | gcC | gcT | 3 | 3 | AY.106 | 0.001005 |
ORF1ab/nsp3 | 534 | A534A | gcC | gcT | 3 | 3 | AY.109 | 0.002219 |
ORF1ab/nsp3 | 534 | A534A | gcC | gcT | 3 | 3 | AY.113 | 0.000427 |
ORF1ab/nsp3 | 534 | A534A | gcC | gcT | 3 | 3 | AY.16.1 | 0.00141 |
ORF1ab/nsp3 | 534 | A534A | gcC | gcT | 3 | 3 | AY.4.5 | 0.000322 |
ORF1ab/nsp3 | 534 | A534A | gcC | gcT | 3 | 3 | AY.5.3 | 0.001012 |
ORF1ab/nsp3 | 534 | A534A | gcC | gcT | 3 | 3 | AY.68 | 0.000821 |
ORF1ab/nsp3 | 534 | A534A | gcC | gcT | 3 | 3 | AY.70 | 0.000626 |
ORF1ab/nsp3 | 534 | A534A | gcC | gcT | 3 | 3 | AY.93 | 0.000819 |
ORF1ab/nsp3 | 534 | A534A | gcC | gcT | 3 | 3 | AY.94 | 0.001328 |
ORF1ab/nsp3 | 534 | A534A | gcC | gcT | 3 | 3 | B.1.1.420 | 0.003018 |
ORF1ab/nsp3 | 534 | A534A | gcC | gcT | 3 | 3 | B.1.177.60 | 0.000655 |
ORF1ab/nsp3 | 534 | A534A | gcC | gcT | 3 | 3 | B.1.351.3 | 0.002629 |
ORF1ab/nsp3 | 534 | A534A | gcC | gcT | 3 | 3 | B.1.36.1 | 0.003421 |
ORF1ab/nsp3 | 534 | A534A | gcC | gcT | 3 | 3 | B.1.469 | 0.01083 |
ORF1ab/nsp3 | 534 | A534A | gcC | gcT | 3 | 3 | B.1.575 | 0.00091 |
ORF1ab/nsp3 | 534 | A534A | gcC | gcT | 3 | 3 | B.1.6 | 0.051724 |
ORF1ab/nsp3 | 534 | A534A | gcC | gcT | 3 | 3 | B.1.609 | 0.001438 |
ORF1ab/nsp3 | 534 | A534A | gcC | gcT | 2 | 3 | P.1.12 | 0.000968 |
ORF1ab/nsp3 | 534 | A534A | gcC | gcT | 2 | 2 | AY.1 | 0.000791 |
ORF1ab/nsp3 | 534 | A534A | gcC | gcT | 2 | 2 | AY.101 | 0.000981 |
ORF1ab/nsp3 | 534 | A534A | gcC | gcT | 2 | 2 | AY.114 | 0.000462 |
ORF1ab/nsp3 | 534 | A534A | gcC | gcT | 2 | 2 | AY.24 | 0.000862 |
ORF1ab/nsp3 | 534 | A534A | gcC | gcT | 2 | 2 | AY.32 | 0.001065 |
ORF1ab/nsp3 | 534 | A534A | gcC | gcT | 2 | 2 | AY.35 | 0.000466 |
ORF1ab/nsp3 | 534 | A534A | gcC | gcT | 2 | 2 | AY.36 | 0.000296 |
ORF1ab/nsp3 | 534 | A534A | gcC | gcT | 2 | 2 | AY.46.4 | 0.000329 |
ORF1ab/nsp3 | 534 | A534A | gcC | gcT | 2 | 2 | AY.55 | 0.001835 |
ORF1ab/nsp3 | 534 | A534A | gcC | gcT | 2 | 2 | AY.73 | 0.001331 |
ORF1ab/nsp3 | 534 | A534A | gcC | gcT | 2 | 2 | AY.95 | 0.001522 |
ORF1ab/nsp3 | 534 | A534A | gcC | gcT | 2 | 2 | AZ.2 | 0.001642 |
ORF1ab/nsp3 | 534 | A534A | gcC | gcT | 2 | 2 | B.1.1.157 | 0.001826 |
ORF1ab/nsp3 | 534 | A534A | gcC | gcT | 2 | 2 | B.1.1.216 | 0.001781 |
ORF1ab/nsp3 | 534 | A534A | gcC | gcT | 2 | 2 | B.1.1.25 | 0.001137 |
ORF1ab/nsp3 | 534 | A534A | gcC | gcT | 2 | 2 | B.1.1.298 | 0.001724 |
ORF1ab/nsp3 | 534 | A534A | gcC | gcT | 2 | 2 | B.1.1.317 | 0.000823 |
ORF1ab/nsp3 | 534 | A534A | gcC | gcT | 2 | 2 | B.1.1.318 | 0.000604 |
ORF1ab/nsp3 | 534 | A534A | gcC | gcT | 2 | 2 | B.1.1.348 | 0.001592 |
ORF1ab/nsp3 | 534 | A534A | gcC | gcT | 2 | 2 | B.1.1.398 | 0.006452 |
ORF1ab/nsp3 | 534 | A534A | gcC | gcT | 1 | 2 | B.1.1.409 | 0.002833 |
ORF1ab/nsp3 | 534 | A534A | gcC | gcT | 2 | 2 | B.1.1.50 | 0.001358 |
ORF1ab/nsp3 | 534 | A534A | gcC | gcT | 2 | 2 | B.1.110.3 | 0.001437 |
ORF1ab/nsp3 | 534 | A534A | gcC | gcT | 2 | 2 | B.1.177.19 | 0.002861 |
ORF1ab/nsp3 | 534 | A534A | gcC | gcT | 2 | 2 | B.1.177.7 | 0.00033 |
ORF1ab/nsp3 | 534 | A534A | gcC | gcT | 2 | 2 | B.1.177.73 | 0.001133 |
ORF1ab/nsp3 | 534 | A534A | gcC | gcT | 2 | 2 | B.1.39 | 0.007812 |
ORF1ab/nsp3 | 534 | A534A | gcC | gcT | 2 | 2 | B.1.493 | 0.051282 |
ORF1ab/nsp3 | 534 | A534A | gcC | gcT | 2 | 2 | B.1.499 | 0.002101 |
ORF1ab/nsp3 | 534 | A534A | gcC | gcT | 2 | 2 | B.1.577 | 0.001375 |
ORF1ab/nsp3 | 534 | A534A | gcC | gcT | 2 | 2 | B.1.595 | 0.000522 |
ORF1ab/nsp3 | 534 | A534A | gcC | gcT | 2 | 2 | B.1.617.1 | 0.000258 |
ORF1ab/nsp3 | 534 | A534A | gcC | gcT | 2 | 2 | L.3 | 0.007092 |
ORF1ab/nsp3 | 534 | A534A | gcC | gcT | 1 | 2 | P.1.1 | 0.000318 |
ORF1ab/nsp3 | 534 | A534A | gcC | gcT | 2 | 2 | P.1.2 | 0.002312 |
ORF1ab/nsp3 | 534 | A534A | gcC | gcT | 1 | 1 | A.21 | 0.00277 |
ORF1ab/nsp3 | 534 | A534A | gcC | gcT | 1 | 1 | A.5 | 0.001923 |
ORF1ab/nsp3 | 534 | A534A | gcC | gcT | 1 | 1 | AY.120.1 | 0.000321 |
ORF1ab/nsp3 | 534 | A534A | gcC | gcT | 1 | 1 | AY.16 | 0.00038 |
ORF1ab/nsp3 | 534 | A534A | gcC | gcT | 1 | 1 | AY.27 | 0.000065 |
ORF1ab/nsp3 | 534 | A534A | gcC | gcT | 1 | 1 | AY.29.1 | 0.000221 |
ORF1ab/nsp3 | 534 | A534A | gcC | gcT | 1 | 1 | AY.38 | 0.000499 |
ORF1ab/nsp3 | 534 | A534A | gcC | gcT | 1 | 1 | AY.40 | 0.000964 |
ORF1ab/nsp3 | 534 | A534A | gcC | gcT | 1 | 1 | AY.46.1 | 0.001027 |
ORF1ab/nsp3 | 534 | A534A | gcC | gcT | 1 | 1 | AY.46.2 | 0.000635 |
ORF1ab/nsp3 | 534 | A534A | gcC | gcT | 1 | 1 | AY.46.3 | 0.000934 |
ORF1ab/nsp3 | 534 | A534A | gcC | gcT | 1 | 1 | AY.46.6 | 0.000072 |
ORF1ab/nsp3 | 534 | A534A | gcC | gcT | 1 | 1 | AY.5.4 | 0.000277 |
ORF1ab/nsp3 | 534 | A534A | gcC | gcT | 1 | 1 | AY.53 | 0.000288 |
ORF1ab/nsp3 | 534 | A534A | gcC | gcT | 1 | 1 | AY.62 | 0.000436 |
ORF1ab/nsp3 | 534 | A534A | gcC | gcT | 1 | 1 | AY.67 | 0.000464 |
ORF1ab/nsp3 | 534 | A534A | gcC | gcT | 1 | 1 | AY.7.1 | 0.000113 |
ORF1ab/nsp3 | 534 | A534A | gcC | gcT | 1 | 1 | AY.78 | 0.001541 |
ORF1ab/nsp3 | 534 | A534A | gcC | gcT | 1 | 1 | B.1.1.161 | 0.003534 |
ORF1ab/nsp3 | 534 | A534A | gcC | gcT | 1 | 1 | B.1.1.176 | 0.000439 |
ORF1ab/nsp3 | 534 | A534A | gcC | gcT | 1 | 1 | B.1.1.205 | 0.003717 |
ORF1ab/nsp3 | 534 | A534A | gcC | gcT | 1 | 1 | B.1.1.263 | 0.001558 |
ORF1ab/nsp3 | 534 | A534A | gcC | gcT | 1 | 1 | B.1.1.265 | 0.003155 |
ORF1ab/nsp3 | 534 | A534A | gcC | gcT | 1 | 1 | B.1.1.284 | 0.000107 |
ORF1ab/nsp3 | 534 | A534A | gcC | gcT | 1 | 1 | B.1.1.291 | 0.000742 |
ORF1ab/nsp3 | 534 | A534A | gcC | gcT | 1 | 1 | B.1.1.302 | 0.002075 |
ORF1ab/nsp3 | 534 | A534A | gcC | gcT | 1 | 1 | B.1.1.312 | 0.001912 |
ORF1ab/nsp3 | 534 | A534A | gcC | gcT | 1 | 1 | B.1.1.315 | 0.008475 |
ORF1ab/nsp3 | 534 | A534A | gcC | gcT | 1 | 1 | B.1.1.354 | 0.004386 |
ORF1ab/nsp3 | 534 | A534A | gcC | gcT | 1 | 1 | B.1.1.369 | 0.000446 |
ORF1ab/nsp3 | 534 | A534A | gcC | gcT | 1 | 1 | B.1.1.373 | 0.02381 |
ORF1ab/nsp3 | 534 | A534A | gcC | gcT | 1 | 1 | B.1.1.397 | 0.002252 |
ORF1ab/nsp3 | 534 | A534A | gcC | gcT | 1 | 1 | B.1.1.450 | 0.034483 |
ORF1ab/nsp3 | 534 | A534A | gcC | gcT | 1 | 1 | B.1.1.512 | 0.028571 |
ORF1ab/nsp3 | 534 | A534A | gcC | gcT | 1 | 1 | B.1.1.57 | 0.011494 |
ORF1ab/nsp3 | 534 | A534A | gcC | gcT | 1 | 1 | B.1.1.63 | 0.000386 |
ORF1ab/nsp3 | 534 | A534A | gcC | gcT | 1 | 1 | B.1.111 | 0.001175 |
ORF1ab/nsp3 | 534 | A534A | gcC | gcT | 1 | 1 | B.1.149 | 0.003425 |
ORF1ab/nsp3 | 534 | A534A | gcC | gcT | 1 | 1 | B.1.160.8 | 0.001289 |
ORF1ab/nsp3 | 534 | A534A | gcC | gcT | 1 | 1 | B.1.177.16 | 0.000664 |
ORF1ab/nsp3 | 534 | A534A | gcC | gcT | 1 | 1 | B.1.177.41 | 0.0025 |
ORF1ab/nsp3 | 534 | A534A | gcC | gcT | 1 | 1 | B.1.177.44 | 0.000519 |
ORF1ab/nsp3 | 534 | A534A | gcC | gcT | 1 | 1 | B.1.177.57 | 0.000281 |
ORF1ab/nsp3 | 534 | A534A | gcC | gcT | 1 | 1 | B.1.177.81 | 0.000189 |
ORF1ab/nsp3 | 534 | A534A | gcC | gcT | 1 | 1 | B.1.177.85 | 0.005435 |
ORF1ab/nsp3 | 534 | A534A | gcC | gcT | 1 | 1 | B.1.240 | 0.000216 |
ORF1ab/nsp3 | 534 | A534A | gcC | gcT | 1 | 1 | B.1.258.17 | 0.000104 |
ORF1ab/nsp3 | 534 | A534A | gcC | gcT | 1 | 1 | B.1.265 | 0.001271 |
ORF1ab/nsp3 | 534 | A534A | gcC | gcT | 1 | 1 | B.1.340 | 0.004292 |
ORF1ab/nsp3 | 534 | A534A | gcC | gcT | 1 | 1 | B.1.346 | 0.001311 |
ORF1ab/nsp3 | 534 | A534A | gcC | gcT | 1 | 1 | B.1.351.2 | 0.000303 |
ORF1ab/nsp3 | 534 | A534A | gcC | gcT | 1 | 1 | B.1.36.17 | 0.000494 |
ORF1ab/nsp3 | 534 | A534A | gcC | gcT | 1 | 1 | B.1.36.18 | 0.00042 |
ORF1ab/nsp3 | 534 | A534A | gcC | gcT | 1 | 1 | B.1.36.36 | 0.000602 |
ORF1ab/nsp3 | 534 | A534A | gcC | gcT | 1 | 1 | B.1.398 | 0.002976 |
ORF1ab/nsp3 | 534 | A534A | gcC | gcT | 1 | 1 | B.1.404 | 0.001302 |
ORF1ab/nsp3 | 534 | A534A | gcC | gcT | 1 | 1 | B.1.406 | 0.006061 |
ORF1ab/nsp3 | 534 | A534A | gcC | gcT | 1 | 1 | B.1.411 | 0.003704 |
ORF1ab/nsp3 | 534 | A534A | gcC | gcT | 1 | 1 | B.1.459 | 0.004082 |
ORF1ab/nsp3 | 534 | A534A | gcC | gcT | 1 | 1 | B.1.471 | 0.002732 |
ORF1ab/nsp3 | 534 | A534A | gcC | gcT | 1 | 1 | B.1.503 | 0.002488 |
ORF1ab/nsp3 | 534 | A534A | gcC | gcT | 1 | 1 | B.1.517 | 0.000427 |
ORF1ab/nsp3 | 534 | A534A | gcC | gcT | 1 | 1 | B.1.568 | 0.001111 |
ORF1ab/nsp3 | 534 | A534A | gcC | gcT | 1 | 1 | B.1.574 | 0.002151 |
ORF1ab/nsp3 | 534 | A534A | gcC | gcT | 1 | 1 | B.1.582 | 0.000491 |
ORF1ab/nsp3 | 534 | A534A | gcC | gcT | 1 | 1 | B.1.588 | 0.00091 |
ORF1ab/nsp3 | 534 | A534A | gcC | gcT | 1 | 1 | B.1.621.1 | 0.000506 |
ORF1ab/nsp3 | 534 | A534A | gcC | gcT | 1 | 1 | B.1.623 | 0.000536 |
ORF1ab/nsp3 | 534 | A534A | gcC | gcT | 1 | 1 | B.23 | 0.002924 |
ORF1ab/nsp3 | 534 | A534A | gcC | gcT | 1 | 1 | B.6 | 0.00091 |
ORF1ab/nsp3 | 534 | A534A | gcC | gcT | 1 | 1 | C.14 | 0.004329 |
ORF1ab/nsp3 | 534 | A534A | gcC | gcT | 1 | 1 | N.4 | 0.004255 |
ORF1ab/nsp3 | 534 | A534A | gcC | gcT | 1 | 1 | P.1.10 | 0.000269 |
ORF1ab/nsp3 | 534 | A534A | gcC | gcT | 1 | 1 | P.1.6 | 0.001946 |
ORF1ab/nsp3 | 534 | A534A | gcC | gcT | 1 | 1 | P.2 | 0.000187 |
ORF1ab/nsp3 | 534 | A534A | gcC | gcT | 1 | 1 | Q.1 | 0.000126 |
ORF1ab/nsp3 | 534 | A534A | gcC | gcT | 1 | 1 | Q.8 | 0.000165 |
ORF1ab/nsp3 | 534 | A534A | gcC | gcT | 1 | 1 | U.3 | 0.003861 |
CoV-GLUE is still in development. CoV-GLUE was originally developed as part of COG-UK by Josh Singer using the GLUE framework at the MRC-University of Glasgow Centre for Virus Research (CVR). In 2021 it was redeveloped by Richard Orton to scale to the millions of genome sequences available. We acknowledge support from the MRC (MC_UU_12014/12), WT (220977/Z/20/Z) and UKRI G2P (MR/W005611/1). Please contact Richard Orton with any queries: Richard.Orton@glasgow.ac.uk
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