CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF1ab/nsp3 : CodonNum = 534

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF1ab/nsp3534A534AA1352AsyngcCgcT33991336000.9884974319-4321
ORF1ab/nsp3534A534AA1352AsyngcCgcA339913760.01106184319-4321
ORF1ab/nsp3534A534AA1352AsyngcCgcG33991150.0004412934319-4321
ORF1ab/nsp3534A534VA1352VnonsyngCcgTc10961108980.9942524319-4321
ORF1ab/nsp3534A534VA1352VnonsyngCCgTT10961630.005747654319-4321
ORF1ab/nsp3534A534TA1352TnonsynGccAcc118111800.9991534319-4321
ORF1ab/nsp3534A534TA1352TnonsynGcCAcT118110.000846744319-4321
ORF1ab/nsp3534A534SA1352SnonsynGccTcc1251240.9924319-4321
ORF1ab/nsp3534A534SA1352SnonsynGCcAGc12510.0084319-4321
ORF1ab/nsp3534A534DA1352DnonsyngCcgAc555514319-4321
ORF1ab/nsp3534A534PA1352PnonsynGccCcc505014319-4321
ORF1ab/nsp3534A534delA1352deldelGCC---414114319-4321
ORF1ab/nsp3534A534HA1352HnonsynGCcCAc121214319-4321
ORF1ab/nsp3534A534GA1352GnonsyngCcgGc12110.9166674319-4321
ORF1ab/nsp3534A534GA1352GnonsyngCCgGG1210.08333334319-4321
ORF1ab/nsp3534A534CA1352CnonsynGCcTGc5514319-4321
ORF1ab/nsp3534A534del1A1352del1delGcc-cc530.64319-4321
ORF1ab/nsp3534A534del1A1352del1delgCcg-c520.44319-4321
ORF1ab/nsp3534A534FA1352FnonsynGCcTTc1114319-4321
ORF1ab/nsp3534A534KA1352KnonsynGCCAAA1114319-4321
ORF1ab/nsp3534A534EA1352EnonsyngCCgAA1114319-4321
ORF1ab/nsp3534A534YA1352YnonsynGCcTAc1114319-4321
ORF1ab/nsp3534A534IA1352InonsynGCcATc1114319-4321

Details of the mutation no within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF1ab/nsp3534A534AgcCgcT3360033991All0.006426
ORF1ab/nsp3534A534AgcCgcA37633991All0.000072
ORF1ab/nsp3534A534AgcCgcG1533991All0.000003
ORF1ab/nsp3534A534AgcCgcT1181211812AY.1180.740008
ORF1ab/nsp3534A534AgcCgcT1178711788AY.9.10.986855
ORF1ab/nsp3534A534AgcCgcA111788AY.9.10.000084
ORF1ab/nsp3534A534VgCcgTc1089810961All0.002084
ORF1ab/nsp3534A534VgCCgTT6310961All0.000012
ORF1ab/nsp3534A534AgcCgcT34273655AY.40.005334
ORF1ab/nsp3534A534AgcCgcA2283655AY.40.000355
ORF1ab/nsp3534A534VgCcgTc16771682AY.40.00261
ORF1ab/nsp3534A534VgCCgTT51682AY.40.000008
ORF1ab/nsp3534A534VgCcgTc16481648B.1.1.70.001475
ORF1ab/nsp3534A534AgcCgcT13521365B.1.1.70.00121
ORF1ab/nsp3534A534AgcCgcA71365B.1.1.70.000006
ORF1ab/nsp3534A534AgcCgcG61365B.1.1.70.000005
ORF1ab/nsp3534A534TGccAcc11801181All0.000226
ORF1ab/nsp3534A534TGcCAcT11181All0
ORF1ab/nsp3534A534AgcCgcT11541154AY.630.446422
ORF1ab/nsp3534A534VgCcgTc660660AY.4.20.014315
ORF1ab/nsp3534A534VgCcgTc615615B.1.617.20.002316
ORF1ab/nsp3534A534VgCcgTc581581AY.430.002574
ORF1ab/nsp3534A534TGccAcc423423AY.880.374005
ORF1ab/nsp3534A534AgcCgcT377377AY.480.175349
ORF1ab/nsp3534A534VgCcgTc359361AY.250.002159
ORF1ab/nsp3534A534VgCCgTT2361AY.250.000012
ORF1ab/nsp3534A534VgCcgTc342342AY.260.009682
ORF1ab/nsp3534A534VgCcgTc333333P.1.10.105781
ORF1ab/nsp3534A534VgCcgTc328328AY.1030.002037
ORF1ab/nsp3534A534VgCcgTc302305B.1.20.002659
ORF1ab/nsp3534A534VgCCgTT3305B.1.20.000026
ORF1ab/nsp3534A534AgcCgcT278296B.1.617.20.001047
ORF1ab/nsp3534A534AgcCgcA17296B.1.617.20.000064
ORF1ab/nsp3534A534AgcCgcG1296B.1.617.20.000004
ORF1ab/nsp3534A534AgcCgcT291291AY.9.20.010688
ORF1ab/nsp3534A534AgcCgcT259259AY.1030.001608
ORF1ab/nsp3534A534TGccAcc252252B.10.002308
ORF1ab/nsp3534A534VgCcgTc243243B.1.10.004408
ORF1ab/nsp3534A534TGccAcc212212AY.40.00033
ORF1ab/nsp3534A534VgCcgTc192192AY.950.146119
ORF1ab/nsp3534A534AgcCgcT172172B.1.20.001515
ORF1ab/nsp3534A534VgCcgTc163163AY.440.000992
ORF1ab/nsp3534A534VgCcgTc159159AY.1200.005911
ORF1ab/nsp3534A534AgcCgcT149150AY.250.000896
ORF1ab/nsp3534A534AgcCgcA1150AY.250.000006
ORF1ab/nsp3534A534VgCcgTc129129B.1.6370.009426
ORF1ab/nsp3534A534AgcCgcT122126AY.430.000541
ORF1ab/nsp3534A534AgcCgcA4126AY.430.000018
ORF1ab/nsp3534A534SGccTcc124125All0.000024
ORF1ab/nsp3534A534SGCcAGc1125All0
ORF1ab/nsp3534A534VgCcgTc123125B.1.120.984
ORF1ab/nsp3534A534VgCCgTT2125B.1.120.016
ORF1ab/nsp3534A534VgCcgTc124124B.1.177.210.009482
ORF1ab/nsp3534A534AgcCgcT119119AY.1190.004202
ORF1ab/nsp3534A534AgcCgcT114116B.1.1770.001501
ORF1ab/nsp3534A534AgcCgcA2116B.1.1770.000026
ORF1ab/nsp3534A534VgCcgTc109109B.10.000998
ORF1ab/nsp3534A534VgCcgTc101101AY.330.006745
ORF1ab/nsp3534A534AgcCgcT101101AY.440.000615
ORF1ab/nsp3534A534VgCcgTc101101P.10.001591
ORF1ab/nsp3534A534VgCcgTc100100B.1.1770.001317
ORF1ab/nsp3534A534VgCcgTc9999AY.30.000985
ORF1ab/nsp3534A534VgCcgTc9696A.2.50.047904
ORF1ab/nsp3534A534VgCcgTc9091AY.390.002224
ORF1ab/nsp3534A534VgCCgTT191AY.390.000025
ORF1ab/nsp3534A534AgcCgcT8686B.1.1.2140.004769
ORF1ab/nsp3534A534AgcCgcT7780B.10.000705
ORF1ab/nsp3534A534AgcCgcA380B.10.000027
ORF1ab/nsp3534A534AgcCgcT7979B.1.5260.001857
ORF1ab/nsp3534A534AgcCgcT7474AY.390.001829
ORF1ab/nsp3534A534AgcCgcT7373AY.30.000726
ORF1ab/nsp3534A534AgcCgcT7272P.1.160.026936
ORF1ab/nsp3534A534VgCcgTc7070B.1.1.5190.00278
ORF1ab/nsp3534A534VgCcgTc6565B.1.5260.001528
ORF1ab/nsp3534A534VgCcgTc6262AY.120.20.079692
ORF1ab/nsp3534A534AgcCgcT6262B.1.438.10.00665
ORF1ab/nsp3534A534VgCcgTc6060AY.340.005818
ORF1ab/nsp3534A534AgcCgcT6060P.10.000945
ORF1ab/nsp3534A534AgcCgcT5959A.150.936508
ORF1ab/nsp3534A534VgCcgTc5656AY.1020.001485
ORF1ab/nsp3534A534DgCcgAc5555All0.000011
ORF1ab/nsp3534A534VgCcgTc5555AY.39.20.084746
ORF1ab/nsp3534A534VgCcgTc5454AY.200.002099
ORF1ab/nsp3534A534VgCcgTc5454AY.50.001115
ORF1ab/nsp3534A534AgcCgcT5454B.1.10.00098
ORF1ab/nsp3534A534AgcCgcT5353B.1.6370.003873
ORF1ab/nsp3534A534PGccCcc5050All0.00001
ORF1ab/nsp3534A534AgcCgcT4949B.1.2430.00341
ORF1ab/nsp3534A534VgCcgTc4646AY.7.10.005184
ORF1ab/nsp3534A534TGccAcc4646B.1.617.20.000173
ORF1ab/nsp3534A534AgcCgcT4445AY.1020.001167
ORF1ab/nsp3534A534AgcCgcA145AY.1020.000027
ORF1ab/nsp3534A534VgCCgTT4545AY.9.10.003768
ORF1ab/nsp3534A534AgcCgcT4545B.1.2340.005937
ORF1ab/nsp3534A534VgCcgTc4545B.1.351.20.013616
ORF1ab/nsp3534A534TGccAcc4242B.1.1.4310.677419
ORF1ab/nsp3534A534VgCcgTc4242B.1.1.5240.875
ORF1ab/nsp3534A534AgcCgcT4242C.370.004875
ORF1ab/nsp3534A534delGCC---4141All0.000008
ORF1ab/nsp3534A534VgCcgTc3941P.1.140.001864
ORF1ab/nsp3534A534VgCCgTT241P.1.140.000096
ORF1ab/nsp3534A534TGccAcc4040AY.1160.011471
ORF1ab/nsp3534A534VgCcgTc4040B.1.1600.001248
ORF1ab/nsp3534A534AgcCgcT3737B.1.1470.027967
ORF1ab/nsp3534A534TGccAcc3737B.1.177.70.0061
ORF1ab/nsp3534A534SGccTcc3636B.1.1.70.000032
ORF1ab/nsp3534A534VgCcgTc3535AY.9.20.001286
ORF1ab/nsp3534A534VgCcgTc3535B.1.1.1590.163551
ORF1ab/nsp3534A534AgcCgcT3535B.1.243.10.777778
ORF1ab/nsp3534A534VgCcgTc3434AY.290.000536
ORF1ab/nsp3534A534AgcCgcT3434B.1.1.10.011107
ORF1ab/nsp3534A534VgCcgTc3333B.1.4270.001666
ORF1ab/nsp3534A534AgcCgcT3131A.2.5.20.048742
ORF1ab/nsp3534A534VgCcgTc3131AY.1210.004195
ORF1ab/nsp3534A534VgCcgTc3131AY.98.10.001501
ORF1ab/nsp3534A534AgcCgcT3030R.10.0027
ORF1ab/nsp3534A534VgCcgTc2929B.1.3510.000862
ORF1ab/nsp3534A534AgcCgcA2728AY.690.00504
ORF1ab/nsp3534A534AgcCgcT128AY.690.000187
ORF1ab/nsp3534A534AgcCgcT2328B.1.3510.000684
ORF1ab/nsp3534A534AgcCgcA528B.1.3510.000149
ORF1ab/nsp3534A534AgcCgcA2328B.1.360.003356
ORF1ab/nsp3534A534AgcCgcT528B.1.360.00073
ORF1ab/nsp3534A534AgcCgcT2727AY.260.000764
ORF1ab/nsp3534A534VgCcgTc2727AY.420.001086
ORF1ab/nsp3534A534AgcCgcT2727B.1.258.140.026471
ORF1ab/nsp3534A534VgCcgTc2626AY.4.50.002795
ORF1ab/nsp3534A534VgCcgTc2626AY.460.002706
ORF1ab/nsp3534A534VgCcgTc2626B.1.4290.000612
ORF1ab/nsp3534A534AgcCgcT2226B.1.5250.00249
ORF1ab/nsp3534A534AgcCgcG426B.1.5250.000453
ORF1ab/nsp3534A534AgcCgcT2626B.1.5420.8125
ORF1ab/nsp3534A534VgCcgTc2525AY.1000.00115
ORF1ab/nsp3534A534AgcCgcT2325AY.1000.001058
ORF1ab/nsp3534A534AgcCgcA225AY.1000.000092
ORF1ab/nsp3534A534AgcCgcT2525AY.1100.002817
ORF1ab/nsp3534A534AgcCgcT2424AY.330.001603
ORF1ab/nsp3534A534AgcCgcA2424AY.4.10.017699
ORF1ab/nsp3534A534AgcCgcT2424B.1.4290.000565
ORF1ab/nsp3534A534AgcCgcT2323AY.200.000894
ORF1ab/nsp3534A534AgcCgcT2323AY.50.000475
ORF1ab/nsp3534A534VgCcgTc2323AY.5.40.006364
ORF1ab/nsp3534A534VgCcgTc2323B.1.360.003356
ORF1ab/nsp3534A534AgcCgcT2222AY.1110.004029
ORF1ab/nsp3534A534SGccTcc2222B.1.617.20.000083
ORF1ab/nsp3534A534TGccAcc2121B.1.20.000185
ORF1ab/nsp3534A534VgCcgTc2020AY.1190.000706
ORF1ab/nsp3534A534VgCcgTc2020AY.450.002434
ORF1ab/nsp3534A534VgCcgTc2020AY.470.000622
ORF1ab/nsp3534A534VgCcgTc2020C.370.002321
ORF1ab/nsp3534A534VgCcgTc1919B.1.1.3110.006805
ORF1ab/nsp3534A534AgcCgcT1818AY.230.001255
ORF1ab/nsp3534A534VgCcgTc1818B.1.177.40.003799
ORF1ab/nsp3534A534VgCcgTc1818B.1.177.50.02236
ORF1ab/nsp3534A534VgCcgTc1818B.1.3110.004942
ORF1ab/nsp3534A534AgcCgcT1818P.1.140.00086
ORF1ab/nsp3534A534AgcCgcT1717AY.340.001648
ORF1ab/nsp3534A534AgcCgcT1717AY.39.10.000673
ORF1ab/nsp3534A534VgCcgTc1717AY.660.018182
ORF1ab/nsp3534A534VgCcgTc1717AY.690.003173
ORF1ab/nsp3534A534delGCC---1717B.1.1.70.000015
ORF1ab/nsp3534A534VgCcgTc1616AY.230.001116
ORF1ab/nsp3534A534DgCcgAc1616AY.30.000159
ORF1ab/nsp3534A534VgCcgTc1616AY.90.001082
ORF1ab/nsp3534A534AgcCgcT1616B.1.1600.000499
ORF1ab/nsp3534A534VgCcgTc1515AY.1050.009646
ORF1ab/nsp3534A534VgCcgTc1515AY.39.10.000594
ORF1ab/nsp3534A534VgCcgTc1515AY.46.60.001083
ORF1ab/nsp3534A534TGccAcc1515B.1.1.70.000013
ORF1ab/nsp3534A534SGccTcc1414AY.1000.000644
ORF1ab/nsp3534A534VgCcgTc1414AY.370.004425
ORF1ab/nsp3534A534AgcCgcT1414AY.980.001106
ORF1ab/nsp3534A534AgcCgcT1414AY.99.20.00129
ORF1ab/nsp3534A534AgcCgcT1414B.1.2580.000932
ORF1ab/nsp3534A534VgCcgTc1313B.1.177.570.003653
ORF1ab/nsp3534A534VgCcgTc1313B.1.2430.000905
ORF1ab/nsp3534A534VgCcgTc1313B.1.2580.000865
ORF1ab/nsp3534A534VgCcgTc1313Q.30.001885
ORF1ab/nsp3534A534HGCcCAc1212All0.000002
ORF1ab/nsp3534A534GgCcgGc1112All0.000002
ORF1ab/nsp3534A534GgCCgGG112All0
ORF1ab/nsp3534A534AgcCgcA1112AT.10.05641
ORF1ab/nsp3534A534AgcCgcT112AT.10.005128
ORF1ab/nsp3534A534VgCcgTc1212AY.360.001779
ORF1ab/nsp3534A534VgCcgTc1212AY.60.000494
ORF1ab/nsp3534A534VgCcgTc1212AY.740.001388
ORF1ab/nsp3534A534VgCcgTc1212AY.75.10.002164
ORF1ab/nsp3534A534VgCcgTc1212AY.99.20.001106
ORF1ab/nsp3534A534TGccAcc1212B.1.10.000218
ORF1ab/nsp3534A534VgCcgTc1212B.1.2400.002587
ORF1ab/nsp3534A534AgcCgcT1212P.1.40.011719
ORF1ab/nsp3534A534VgCcgTc1111A0.004257
ORF1ab/nsp3534A534VgCcgTc1111AY.1090.008136
ORF1ab/nsp3534A534AgcCgcT1011AY.1170.000845
ORF1ab/nsp3534A534AgcCgcA111AY.1170.000085
ORF1ab/nsp3534A534AgcCgcT1111AY.290.000174
ORF1ab/nsp3534A534AgcCgcT1011AY.460.001041
ORF1ab/nsp3534A534AgcCgcA111AY.460.000104
ORF1ab/nsp3534A534AgcCgcT1111AY.98.10.000533
ORF1ab/nsp3534A534AgcCgcT1111B.1.1.370.002122
ORF1ab/nsp3534A534VgCcgTc1111B.1.2340.001451
ORF1ab/nsp3534A534VgCcgTc1111R.10.00099
ORF1ab/nsp3534A534VgCcgTc1010AY.1130.001424
ORF1ab/nsp3534A534AgcCgcT1010AY.1200.000372
ORF1ab/nsp3534A534VgCcgTc1010AY.500.007994
ORF1ab/nsp3534A534AgcCgcT1010B.1.1.2690.013532
ORF1ab/nsp3534A534VgCcgTc1010B.1.177.70.001649
ORF1ab/nsp3534A534VgCcgTc1010B.1.258.170.00104
ORF1ab/nsp3534A534AgcCgcT1010B.1.5960.000871
ORF1ab/nsp3534A534VgCcgTc1010B.1.6210.000885
ORF1ab/nsp3534A534AgcCgcT710B.1.6210.00062
ORF1ab/nsp3534A534AgcCgcG210B.1.6210.000177
ORF1ab/nsp3534A534AgcCgcA110B.1.6210.000089
ORF1ab/nsp3534A534VgCcgTc1010B.1.6280.003524
ORF1ab/nsp3534A534AgcCgcT99AY.420.000362
ORF1ab/nsp3534A534VgCcgTc99AY.46.40.001481
ORF1ab/nsp3534A534AgcCgcT99AY.840.003937
ORF1ab/nsp3534A534VgCcgTc99AY.900.00616
ORF1ab/nsp3534A534AgcCgcT99B.1.1.5190.000357
ORF1ab/nsp3534A534SGccTcc99B.1.1770.000119
ORF1ab/nsp3534A534AgcCgcT99B.1.3690.002567
ORF1ab/nsp3534A534VgCcgTc99B.1.5960.000784
ORF1ab/nsp3534A534AgcCgcT88AY.1050.005145
ORF1ab/nsp3534A534VgCcgTc88AY.1110.001465
ORF1ab/nsp3534A534VgCcgTc88AY.1140.001849
ORF1ab/nsp3534A534AgcCgcT88AY.1160.002294
ORF1ab/nsp3534A534AgcCgcT88AY.1210.001083
ORF1ab/nsp3534A534AgcCgcT88AY.470.000249
ORF1ab/nsp3534A534VgCcgTc88AY.750.000448
ORF1ab/nsp3534A534VgCcgTc88B.1.1.2140.000444
ORF1ab/nsp3534A534VgCcgTc88B.1.1.280.00249
ORF1ab/nsp3534A534VgCcgTc88B.1.1.2840.000859
ORF1ab/nsp3534A534VgCcgTc88B.1.1.3560.068376
ORF1ab/nsp3534A534VgCcgTc88B.1.1.500.005431
ORF1ab/nsp3534A534VgCcgTc88B.1.2210.000568
ORF1ab/nsp3534A534AgcCgcT88B.1.2210.000568
ORF1ab/nsp3534A534AgcCgcT88B.1.4270.000404
ORF1ab/nsp3534A534VgCcgTc88B.1.5610.003176
ORF1ab/nsp3534A534VgCcgTc88B.1.617.10.001032
ORF1ab/nsp3534A534AgcCgcT88P.1.170.001294
ORF1ab/nsp3534A534VgCcgTc77AY.120.2.10.003488
ORF1ab/nsp3534A534TGccAcc77AY.250.000042
ORF1ab/nsp3534A534AgcCgcT77AY.4.20.000152
ORF1ab/nsp3534A534TGccAcc77AY.430.000031
ORF1ab/nsp3534A534VgCcgTc77AY.540.000667
ORF1ab/nsp3534A534VgCcgTc77AY.610.000733
ORF1ab/nsp3534A534AgcCgcT67AY.650.003198
ORF1ab/nsp3534A534AgcCgcA17AY.650.000533
ORF1ab/nsp3534A534AgcCgcT77AY.850.00299
ORF1ab/nsp3534A534AgcCgcT77AY.920.002011
ORF1ab/nsp3534A534VgCcgTc77B.1.1.330.002946
ORF1ab/nsp3534A534PGccCcc77B.1.1.70.000006
ORF1ab/nsp3534A534AgcCgcT66A.2.50.002994
ORF1ab/nsp3534A534VgCcgTc66AY.270.000388
ORF1ab/nsp3534A534TGccAcc66AY.30.00006
ORF1ab/nsp3534A534delGCC---66AY.40.000009
ORF1ab/nsp3534A534AgcCgcT66AY.450.00073
ORF1ab/nsp3534A534AgcCgcT66AY.90.000406
ORF1ab/nsp3534A534VgCcgTc66B0.000767
ORF1ab/nsp3534A534VgCcgTc66B.1.1.10.00196
ORF1ab/nsp3534A534VgCcgTc66B.1.1.2160.005343
ORF1ab/nsp3534A534VgCcgTc66B.1.1.2730.040541
ORF1ab/nsp3534A534AgcCgcT66B.1.1.3060.00263
ORF1ab/nsp3534A534VgCcgTc66B.1.1.3680.018519
ORF1ab/nsp3534A534AgcCgcT66B.1.160.110.034286
ORF1ab/nsp3534A534VgCcgTc66B.1.177.740.090909
ORF1ab/nsp3534A534AgcCgcT66B.1.177.800.011472
ORF1ab/nsp3534A534VgCcgTc66B.1.2650.007624
ORF1ab/nsp3534A534AgcCgcT66B.1.4200.0625
ORF1ab/nsp3534A534VgCcgTc66B.1.4280.006122
ORF1ab/nsp3534A534AgcCgcT66B.1.6270.012121
ORF1ab/nsp3534A534VgCcgTc66C.36.30.003403
ORF1ab/nsp3534A534AgcCgcT66C.36.30.003403
ORF1ab/nsp3534A534CGCcTGc55All0.000001
ORF1ab/nsp3534A534del1Gcc-cc35All0.000001
ORF1ab/nsp3534A534del1gCcg-c25All0
ORF1ab/nsp3534A534VgCcgTc55AY.1070.00233
ORF1ab/nsp3534A534VgCCgTT35AY.1180.000188
ORF1ab/nsp3534A534VgCcgTc25AY.1180.000125
ORF1ab/nsp3534A534AgcCgcT55AY.120.00158
ORF1ab/nsp3534A534VgCcgTc55AY.160.001898
ORF1ab/nsp3534A534SGccTcc55AY.260.000142
ORF1ab/nsp3534A534VgCcgTc55AY.490.015974
ORF1ab/nsp3534A534AgcCgcT55AY.640.002976
ORF1ab/nsp3534A534AgcCgcT55AY.710.002375
ORF1ab/nsp3534A534VgCcgTc55AY.980.000395
ORF1ab/nsp3534A534VgCcgTc55AZ.30.007599
ORF1ab/nsp3534A534AgcCgcT45B0.000511
ORF1ab/nsp3534A534AgcCgcA15B0.000128
ORF1ab/nsp3534A534VgCcgTc55B.1.1.2940.006329
ORF1ab/nsp3534A534AgcCgcT55B.1.177.350.003455
ORF1ab/nsp3534A534VgCcgTc55B.1.177.600.001092
ORF1ab/nsp3534A534AgcCgcT55B.1.3910.005637
ORF1ab/nsp3534A534AgcCgcT55B.1.4000.002145
ORF1ab/nsp3534A534AgcCgcT45B.1.466.20.001565
ORF1ab/nsp3534A534AgcCgcA15B.1.466.20.000391
ORF1ab/nsp3534A534AgcCgcT55B.1.5610.001985
ORF1ab/nsp3534A534VgCcgTc55B.1.5750.001517
ORF1ab/nsp3534A534PGccCcc44A.2.40.013468
ORF1ab/nsp3534A534VgCcgTc44AY.1160.001147
ORF1ab/nsp3534A534SGccTcc44AY.1190.000141
ORF1ab/nsp3534A534VgCcgTc44AY.130.000644
ORF1ab/nsp3534A534VgCcgTc44AY.140.000352
ORF1ab/nsp3534A534VgCcgTc44AY.3.10.000341
ORF1ab/nsp3534A534AgcCgcT44AY.3.10.000341
ORF1ab/nsp3534A534VgCcgTc44AY.350.000932
ORF1ab/nsp3534A534AgcCgcT44AY.540.000381
ORF1ab/nsp3534A534VgCcgTc44AY.590.002119
ORF1ab/nsp3534A534AgcCgcT44AY.60.000165
ORF1ab/nsp3534A534VgCcgTc44AY.710.0019
ORF1ab/nsp3534A534AgcCgcT44AY.750.000224
ORF1ab/nsp3534A534VgCcgTc44AY.920.001149
ORF1ab/nsp3534A534PGccCcc44B.10.000037
ORF1ab/nsp3534A534VgCcgTc44B.1.1.1760.001757
ORF1ab/nsp3534A534VgCcgTc44B.1.1.2220.000816
ORF1ab/nsp3534A534VgCcgTc44B.1.1.250.002274
ORF1ab/nsp3534A534VgCcgTc44B.1.1.3060.001754
ORF1ab/nsp3534A534VgCcgTc44B.1.1.50.033333
ORF1ab/nsp3534A534TGccAcc44B.1.1.5190.000159
ORF1ab/nsp3534A534DgCcgAc44B.1.1.70.000004
ORF1ab/nsp3534A534VgCcgTc44B.1.1.720.121212
ORF1ab/nsp3534A534VgCcgTc44B.1.1650.047619
ORF1ab/nsp3534A534TGccAcc44B.1.1770.000053
ORF1ab/nsp3534A534AgcCgcT24B.1.177.210.000153
ORF1ab/nsp3534A534AgcCgcA24B.1.177.210.000153
ORF1ab/nsp3534A534SGccTcc44B.1.20.000035
ORF1ab/nsp3534A534DgCcgAc44B.1.2580.000266
ORF1ab/nsp3534A534AgcCgcT44B.1.3110.001098
ORF1ab/nsp3534A534VgCcgTc44B.1.36.190.037037
ORF1ab/nsp3534A534VgCcgTc44B.1.36.220.004831
ORF1ab/nsp3534A534AgcCgcT34B.1.36.290.001552
ORF1ab/nsp3534A534AgcCgcA14B.1.36.290.000517
ORF1ab/nsp3534A534AgcCgcT44B.1.5230.009804
ORF1ab/nsp3534A534VgCcgTc44B.1.5250.000453
ORF1ab/nsp3534A534VgCcgTc44B.1.6120.01061
ORF1ab/nsp3534A534AgcCgcT44B.1.6190.003484
ORF1ab/nsp3534A534VgCcgTc44B.400.001457
ORF1ab/nsp3534A534AgcCgcT44C.260.029412
ORF1ab/nsp3534A534PGccCcc44D.20.0003
ORF1ab/nsp3534A534AgcCgcT44D.20.0003
ORF1ab/nsp3534A534VgCcgTc44P.1.20.004624
ORF1ab/nsp3534A534VgCcgTc44P.20.000747
ORF1ab/nsp3534A534VgCcgTc44Q.10.000505
ORF1ab/nsp3534A534VgCcgTc44Q.80.00066
ORF1ab/nsp3534A534GgCcgGc230.111111
ORF1ab/nsp3534A534SGccTcc230.111111
ORF1ab/nsp3534A534AgcCgcA230.111111
ORF1ab/nsp3534A534AgcCgcG130.055556
ORF1ab/nsp3534A534GgCCgGG130.055556
ORF1ab/nsp3534A534SGCcAGc130.055556
ORF1ab/nsp3534A534VgCcgTc33A.10.000846
ORF1ab/nsp3534A534DgCcgAc33A.2.40.010101
ORF1ab/nsp3534A534HGCcCAc33A.2.40.010101
ORF1ab/nsp3534A534VgCcgTc33A.270.004967
ORF1ab/nsp3534A534VgCcgTc33AD.20.000657
ORF1ab/nsp3534A534AgcCgcT23AD.20.000438
ORF1ab/nsp3534A534AgcCgcA13AD.20.000219
ORF1ab/nsp3534A534DgCcgAc33AY.1030.000019
ORF1ab/nsp3534A534VgCcgTc33AY.1040.005952
ORF1ab/nsp3534A534AgcCgcT33AY.1040.005952
ORF1ab/nsp3534A534AgcCgcT33AY.1060.001005
ORF1ab/nsp3534A534AgcCgcT33AY.1090.002219
ORF1ab/nsp3534A534VgCcgTc33AY.1100.000338
ORF1ab/nsp3534A534AgcCgcT33AY.1130.000427
ORF1ab/nsp3534A534VgCcgTc33AY.116.10.000934
ORF1ab/nsp3534A534VgCcgTc33AY.1170.000254
ORF1ab/nsp3534A534TGccAcc33AY.1200.000112
ORF1ab/nsp3534A534VgCcgTc33AY.120.10.000963
ORF1ab/nsp3534A534AgcCgcT33AY.16.10.00141
ORF1ab/nsp3534A534PGccCcc33AY.250.000018
ORF1ab/nsp3534A534VgCcgTc33AY.320.001597
ORF1ab/nsp3534A534DgCcgAc33AY.40.000005
ORF1ab/nsp3534A534AgcCgcT33AY.4.50.000322
ORF1ab/nsp3534A534delGCC---33AY.4.50.000322
ORF1ab/nsp3534A534SGccTcc33AY.440.000018
ORF1ab/nsp3534A534AgcCgcT33AY.5.30.001012
ORF1ab/nsp3534A534AgcCgcT33AY.680.000821
ORF1ab/nsp3534A534AgcCgcT33AY.700.000626
ORF1ab/nsp3534A534VgCcgTc33AY.700.000626
ORF1ab/nsp3534A534VgCcgTc33AY.770.003382
ORF1ab/nsp3534A534VgCcgTc33AY.850.001282
ORF1ab/nsp3534A534VgCcgTc33AY.870.002498
ORF1ab/nsp3534A534AgcCgcT33AY.930.000819
ORF1ab/nsp3534A534AgcCgcT33AY.940.001328
ORF1ab/nsp3534A534SGccTcc33B.10.000027
ORF1ab/nsp3534A534SGccTcc33B.1.10.000054
ORF1ab/nsp3534A534VgCcgTc33B.1.1.2690.00406
ORF1ab/nsp3534A534VgCcgTc33B.1.1.2770.002276
ORF1ab/nsp3534A534VgCcgTc33B.1.1.3170.001235
ORF1ab/nsp3534A534VgCcgTc33B.1.1.370.000579
ORF1ab/nsp3534A534VgCcgTc33B.1.1.390.001529
ORF1ab/nsp3534A534AgcCgcT33B.1.1.4200.003018
ORF1ab/nsp3534A534GgCcgGc33B.1.1.70.000003
ORF1ab/nsp3534A534VgCcgTc33B.1.160.160.002788
ORF1ab/nsp3534A534VgCcgTc33B.1.160.220.02027
ORF1ab/nsp3534A534delGCC---33B.1.1770.00004
ORF1ab/nsp3534A534AgcCgcT33B.1.177.600.000655
ORF1ab/nsp3534A534PGccCcc33B.1.2320.001612
ORF1ab/nsp3534A534AgcCgcT33B.1.351.30.002629
ORF1ab/nsp3534A534AgcCgcT33B.1.36.10.003421
ORF1ab/nsp3534A534GgCcgGc33B.1.4290.000071
ORF1ab/nsp3534A534VgCcgTc33B.1.4590.012245
ORF1ab/nsp3534A534AgcCgcT33B.1.4690.01083
ORF1ab/nsp3534A534VgCcgTc33B.1.4990.003151
ORF1ab/nsp3534A534VgCcgTc33B.1.5240.004219
ORF1ab/nsp3534A534AgcCgcT33B.1.5750.00091
ORF1ab/nsp3534A534AgcCgcT33B.1.60.051724
ORF1ab/nsp3534A534AgcCgcT33B.1.6090.001438
ORF1ab/nsp3534A534VgCcgTc33B.60.00273
ORF1ab/nsp3534A534TGccAcc33C.350.002322
ORF1ab/nsp3534A534TGccAcc33P.10.000047
ORF1ab/nsp3534A534VgCcgTc33P.1.120.001452
ORF1ab/nsp3534A534AgcCgcT23P.1.120.000968
ORF1ab/nsp3534A534AgcCgcA13P.1.120.000484
ORF1ab/nsp3534A534VgCcgTc33P.1.150.000697
ORF1ab/nsp3534A534VgCcgTc33P.1.70.000958
ORF1ab/nsp3534A534VgCcgTc22A.2.5.10.009615
ORF1ab/nsp3534A534VgCcgTc22A.210.00554
ORF1ab/nsp3534A534AgcCgcT22AY.10.000791
ORF1ab/nsp3534A534VgCcgTc22AY.100.00106
ORF1ab/nsp3534A534AgcCgcT22AY.1010.000981
ORF1ab/nsp3534A534TGccAcc22AY.1020.000053
ORF1ab/nsp3534A534VgCcgTc22AY.1080.002205
ORF1ab/nsp3534A534AgcCgcT22AY.1140.000462
ORF1ab/nsp3534A534VgCcgTc22AY.120.000632
ORF1ab/nsp3534A534SGccTcc22AY.120.000632
ORF1ab/nsp3534A534VgCcgTc22AY.20.000712
ORF1ab/nsp3534A534AgcCgcT22AY.240.000862
ORF1ab/nsp3534A534VgCcgTc22AY.300.000791
ORF1ab/nsp3534A534AgcCgcT22AY.320.001065
ORF1ab/nsp3534A534VgCcgTc22AY.34.10.00102
ORF1ab/nsp3534A534AgcCgcT22AY.350.000466
ORF1ab/nsp3534A534AgcCgcT22AY.360.000296
ORF1ab/nsp3534A534PGccCcc22AY.40.000003
ORF1ab/nsp3534A534VgCcgTc22AY.4.10.001475
ORF1ab/nsp3534A534TGccAcc22AY.4.20.000043
ORF1ab/nsp3534A534CGCcTGc22AY.440.000012
ORF1ab/nsp3534A534PGccCcc22AY.440.000012
ORF1ab/nsp3534A534TGccAcc22AY.450.000243
ORF1ab/nsp3534A534VgCcgTc22AY.46.20.001271
ORF1ab/nsp3534A534AgcCgcT22AY.46.40.000329
ORF1ab/nsp3534A534VgCcgTc22AY.46.50.000397
ORF1ab/nsp3534A534VgCcgTc22AY.480.00093
ORF1ab/nsp3534A534VgCcgTc22AY.5.30.000675
ORF1ab/nsp3534A534AgcCgcT22AY.550.001835
ORF1ab/nsp3534A534DgCcgAc22AY.60.000082
ORF1ab/nsp3534A534TGccAcc22AY.610.00021
ORF1ab/nsp3534A534VgCcgTc22AY.620.000871
ORF1ab/nsp3534A534VgCcgTc22AY.70.000392
ORF1ab/nsp3534A534TGccAcc22AY.7.10.000225
ORF1ab/nsp3534A534TGccAcc22AY.730.001331
ORF1ab/nsp3534A534AgcCgcT22AY.730.001331
ORF1ab/nsp3534A534VgCcgTc22AY.860.00166
ORF1ab/nsp3534A534VgCcgTc22AY.890.009804
ORF1ab/nsp3534A534VgCcgTc22AY.930.000546
ORF1ab/nsp3534A534AgcCgcT22AY.950.001522
ORF1ab/nsp3534A534AgcCgcT22AZ.20.001642
ORF1ab/nsp3534A534AgcCgcT22B.1.1.1570.001826
ORF1ab/nsp3534A534VgCcgTc22B.1.1.1740.006757
ORF1ab/nsp3534A534AgcCgcT22B.1.1.2160.001781
ORF1ab/nsp3534A534VgCcgTc22B.1.1.2200.003717
ORF1ab/nsp3534A534AgcCgcT22B.1.1.250.001137
ORF1ab/nsp3534A534VgCcgTc22B.1.1.2980.001724
ORF1ab/nsp3534A534AgcCgcT22B.1.1.2980.001724
ORF1ab/nsp3534A534PGccCcc22B.1.1.2980.001724
ORF1ab/nsp3534A534AgcCgcT22B.1.1.3170.000823
ORF1ab/nsp3534A534AgcCgcT22B.1.1.3180.000604
ORF1ab/nsp3534A534AgcCgcT22B.1.1.3480.001592
ORF1ab/nsp3534A534VgCcgTc22B.1.1.3700.025316
ORF1ab/nsp3534A534AgcCgcT22B.1.1.3980.006452
ORF1ab/nsp3534A534AgcCgcA12B.1.1.4090.002833
ORF1ab/nsp3534A534AgcCgcT12B.1.1.4090.002833
ORF1ab/nsp3534A534VgCcgTc22B.1.1.4110.029412
ORF1ab/nsp3534A534VgCcgTc22B.1.1.4320.002532
ORF1ab/nsp3534A534VgCcgTc22B.1.1.4340.000697
ORF1ab/nsp3534A534VgCcgTc22B.1.1.440.004819
ORF1ab/nsp3534A534AgcCgcT22B.1.1.500.001358
ORF1ab/nsp3534A534VgCcgTc22B.1.1.700.000682
ORF1ab/nsp3534A534AgcCgcT22B.1.110.30.001437
ORF1ab/nsp3534A534TGccAcc22B.1.1600.000062
ORF1ab/nsp3534A534AgcCgcT22B.1.177.190.002861
ORF1ab/nsp3534A534VgCcgTc22B.1.177.440.001038
ORF1ab/nsp3534A534VgCcgTc22B.1.177.580.002663
ORF1ab/nsp3534A534VgCcgTc22B.1.177.620.002384
ORF1ab/nsp3534A534AgcCgcT22B.1.177.70.00033
ORF1ab/nsp3534A534AgcCgcT22B.1.177.730.001133
ORF1ab/nsp3534A534DgCcgAc22B.1.20.000018
ORF1ab/nsp3534A534delGCC---22B.1.20.000018
ORF1ab/nsp3534A534GgCcgGc22B.1.2210.000142
ORF1ab/nsp3534A534VgCcgTc22B.1.2390.002442
ORF1ab/nsp3534A534VgCcgTc22B.1.3140.015038
ORF1ab/nsp3534A534VgCcgTc22B.1.3420.2
ORF1ab/nsp3534A534VgCcgTc22B.1.3460.002621
ORF1ab/nsp3534A534VgCcgTc22B.1.36.10.002281
ORF1ab/nsp3534A534VgCcgTc22B.1.36.180.00084
ORF1ab/nsp3534A534VgCcgTc22B.1.36.290.001035
ORF1ab/nsp3534A534VgCcgTc22B.1.36.70.008
ORF1ab/nsp3534A534VgCcgTc22B.1.3690.00057
ORF1ab/nsp3534A534AgcCgcT22B.1.390.007812
ORF1ab/nsp3534A534SGccTcc22B.1.4290.000047
ORF1ab/nsp3534A534VgCcgTc22B.1.4780.023529
ORF1ab/nsp3534A534AgcCgcT22B.1.4930.051282
ORF1ab/nsp3534A534VgCcgTc22B.1.4970.00063
ORF1ab/nsp3534A534AgcCgcT22B.1.4990.002101
ORF1ab/nsp3534A534VgCcgTc22B.1.5380.016129
ORF1ab/nsp3534A534VgCcgTc22B.1.5510.002581
ORF1ab/nsp3534A534AgcCgcT22B.1.5770.001375
ORF1ab/nsp3534A534VgCcgTc22B.1.5820.000981
ORF1ab/nsp3534A534AgcCgcT22B.1.5950.000522
ORF1ab/nsp3534A534AgcCgcT22B.1.617.10.000258
ORF1ab/nsp3534A534VgCcgTc22B.1.6230.001073
ORF1ab/nsp3534A534del1Gcc-cc22B.1.6270.00404
ORF1ab/nsp3534A534VgCcgTc22B.1.80.003945
ORF1ab/nsp3534A534VgCcgTc22B.1.90.012346
ORF1ab/nsp3534A534DgCcgAc22B.60.00182
ORF1ab/nsp3534A534AgcCgcT22L.30.007092
ORF1ab/nsp3534A534SGccTcc22P.10.000032
ORF1ab/nsp3534A534AgcCgcA12P.1.10.000318
ORF1ab/nsp3534A534AgcCgcT12P.1.10.000318
ORF1ab/nsp3534A534VgCcgTc22P.1.100.000539
ORF1ab/nsp3534A534AgcCgcT22P.1.20.002312
ORF1ab/nsp3534A534TGccAcc110.055556
ORF1ab/nsp3534A534CGCcTGc110.055556
ORF1ab/nsp3534A534DgCcgAc110.055556
ORF1ab/nsp3534A534YGCcTAc110.055556
ORF1ab/nsp3534A534PGccCcc11A.10.000282
ORF1ab/nsp3534A534VgCcgTc11A.180.05
ORF1ab/nsp3534A534TGccAcc11A.2.5.20.001572
ORF1ab/nsp3534A534AgcCgcT11A.210.00277
ORF1ab/nsp3534A534VgCcgTc11A.280.002646
ORF1ab/nsp3534A534VgCcgTc11A.30.002096
ORF1ab/nsp3534A534AgcCgcT11A.50.001923
ORF1ab/nsp3534A534FGCcTTc11All0
ORF1ab/nsp3534A534IGCcATc11All0
ORF1ab/nsp3534A534KGCCAAA11All0
ORF1ab/nsp3534A534YGCcTAc11All0
ORF1ab/nsp3534A534EgCCgAA11All0
ORF1ab/nsp3534A534VgCcgTc11AS.20.015625
ORF1ab/nsp3534A534SGccTcc11AV.10.005051
ORF1ab/nsp3534A534VgCcgTc11AW.10.003049
ORF1ab/nsp3534A534HGCcCAc11AY.1000.000046
ORF1ab/nsp3534A534VgCcgTc11AY.1010.00049
ORF1ab/nsp3534A534SGccTcc11AY.1020.000027
ORF1ab/nsp3534A534DgCcgAc11AY.1020.000027
ORF1ab/nsp3534A534TGccAcc11AY.1030.000006
ORF1ab/nsp3534A534TGccAcc11AY.1050.000643
ORF1ab/nsp3534A534VgCcgTc11AY.110.001339
ORF1ab/nsp3534A534TGccAcc11AY.1170.000085
ORF1ab/nsp3534A534PGccCcc11AY.1180.000063
ORF1ab/nsp3534A534TGcCAcT11AY.1180.000063
ORF1ab/nsp3534A534TGccAcc11AY.120.10.000321
ORF1ab/nsp3534A534delGCC---11AY.120.10.000321
ORF1ab/nsp3534A534AgcCgcT11AY.120.10.000321
ORF1ab/nsp3534A534VgCcgTc11AY.150.002222
ORF1ab/nsp3534A534AgcCgcT11AY.160.00038
ORF1ab/nsp3534A534TGccAcc11AY.16.10.00047
ORF1ab/nsp3534A534VgCcgTc11AY.210.001898
ORF1ab/nsp3534A534VgCcgTc11AY.23.10.000417
ORF1ab/nsp3534A534VgCcgTc11AY.240.000431
ORF1ab/nsp3534A534DgCcgAc11AY.250.000006
ORF1ab/nsp3534A534AgcCgcT11AY.270.000065
ORF1ab/nsp3534A534VgCcgTc11AY.280.00189
ORF1ab/nsp3534A534SGccTcc11AY.290.000016
ORF1ab/nsp3534A534AgcCgcT11AY.29.10.000221
ORF1ab/nsp3534A534SGccTcc11AY.30.00001
ORF1ab/nsp3534A534TGccAcc11AY.300.000396
ORF1ab/nsp3534A534SGccTcc11AY.340.000097
ORF1ab/nsp3534A534AgcCgcT11AY.380.000499
ORF1ab/nsp3534A534TGccAcc11AY.390.000025
ORF1ab/nsp3534A534SGccTcc11AY.40.000002
ORF1ab/nsp3534A534VgCcgTc11AY.4.30.000842
ORF1ab/nsp3534A534VgCcgTc11AY.4.40.000409
ORF1ab/nsp3534A534VgCcgTc11AY.400.000964
ORF1ab/nsp3534A534AgcCgcT11AY.400.000964
ORF1ab/nsp3534A534TGccAcc11AY.420.00004
ORF1ab/nsp3534A534PGccCcc11AY.420.00004
ORF1ab/nsp3534A534SGccTcc11AY.430.000004
ORF1ab/nsp3534A534CGCcTGc11AY.430.000004
ORF1ab/nsp3534A534TGccAcc11AY.440.000006
ORF1ab/nsp3534A534DgCcgAc11AY.440.000006
ORF1ab/nsp3534A534VgCcgTc11AY.46.10.001027
ORF1ab/nsp3534A534AgcCgcT11AY.46.10.001027
ORF1ab/nsp3534A534delGCC---11AY.46.20.000635
ORF1ab/nsp3534A534AgcCgcT11AY.46.20.000635
ORF1ab/nsp3534A534AgcCgcT11AY.46.30.000934
ORF1ab/nsp3534A534AgcCgcT11AY.46.60.000072
ORF1ab/nsp3534A534TGccAcc11AY.50.000021
ORF1ab/nsp3534A534VgCcgTc11AY.5.10.003759
ORF1ab/nsp3534A534AgcCgcT11AY.5.40.000277
ORF1ab/nsp3534A534VgCcgTc11AY.510.000909
ORF1ab/nsp3534A534VgCcgTc11AY.520.000814
ORF1ab/nsp3534A534AgcCgcT11AY.530.000288
ORF1ab/nsp3534A534TGccAcc11AY.550.000917
ORF1ab/nsp3534A534VgCcgTc11AY.580.000907
ORF1ab/nsp3534A534AgcCgcA11AY.610.000105
ORF1ab/nsp3534A534AgcCgcT11AY.620.000436
ORF1ab/nsp3534A534VgCcgTc11AY.630.000387
ORF1ab/nsp3534A534AgcCgcT11AY.670.000464
ORF1ab/nsp3534A534VgCcgTc11AY.680.000274
ORF1ab/nsp3534A534AgcCgcT11AY.7.10.000113
ORF1ab/nsp3534A534VgCcgTc11AY.730.000665
ORF1ab/nsp3534A534PGccCcc11AY.740.000116
ORF1ab/nsp3534A534TGccAcc11AY.750.000056
ORF1ab/nsp3534A534AgcCgcA11AY.75.10.00018
ORF1ab/nsp3534A534VgCcgTc11AY.760.004831
ORF1ab/nsp3534A534AgcCgcT11AY.780.001541
ORF1ab/nsp3534A534CGCcTGc11AY.790.001211
ORF1ab/nsp3534A534VgCcgTc11AY.840.000437
ORF1ab/nsp3534A534VgCcgTc11AY.910.00073
ORF1ab/nsp3534A534TGccAcc11AY.940.000443
ORF1ab/nsp3534A534PGccCcc11AY.990.001049
ORF1ab/nsp3534A534DgCcgAc11B.10.000009
ORF1ab/nsp3534A534IGCcATc11B.10.000009
ORF1ab/nsp3534A534HGCcCAc11B.10.000009
ORF1ab/nsp3534A534PGccCcc11B.1.10.000018
ORF1ab/nsp3534A534KGCCAAA11B.1.10.000018
ORF1ab/nsp3534A534DgCcgAc11B.1.10.000018
ORF1ab/nsp3534A534del1Gcc-cc11B.1.10.000018
ORF1ab/nsp3534A534VgCcgTc11B.1.1.1530.001095
ORF1ab/nsp3534A534VgCcgTc11B.1.1.1610.003534
ORF1ab/nsp3534A534AgcCgcT11B.1.1.1610.003534
ORF1ab/nsp3534A534VgCcgTc11B.1.1.1700.001247
ORF1ab/nsp3534A534AgcCgcT11B.1.1.1760.000439
ORF1ab/nsp3534A534PGccCcc11B.1.1.1860.003436
ORF1ab/nsp3534A534VgCcgTc11B.1.1.1860.003436
ORF1ab/nsp3534A534AgcCgcA11B.1.1.1920.002309
ORF1ab/nsp3534A534AgcCgcT11B.1.1.2050.003717
ORF1ab/nsp3534A534SGccTcc11B.1.1.2530.002506
ORF1ab/nsp3534A534VgCcgTc11B.1.1.2580.003257
ORF1ab/nsp3534A534VgCcgTc11B.1.1.2630.001558
ORF1ab/nsp3534A534AgcCgcT11B.1.1.2630.001558
ORF1ab/nsp3534A534AgcCgcT11B.1.1.2650.003155
ORF1ab/nsp3534A534VgCcgTc11B.1.1.270.00565
ORF1ab/nsp3534A534VgCcgTc11B.1.1.2740.005051
ORF1ab/nsp3534A534VgCcgTc11B.1.1.2790.001121
ORF1ab/nsp3534A534AgcCgcT11B.1.1.2840.000107
ORF1ab/nsp3534A534TGccAcc11B.1.1.2850.006536
ORF1ab/nsp3534A534VgCcgTc11B.1.1.2860.002899
ORF1ab/nsp3534A534AgcCgcT11B.1.1.2910.000742
ORF1ab/nsp3534A534AgcCgcT11B.1.1.3020.002075
ORF1ab/nsp3534A534VgCcgTc11B.1.1.3070.002532
ORF1ab/nsp3534A534AgcCgcT11B.1.1.3120.001912
ORF1ab/nsp3534A534AgcCgcT11B.1.1.3150.008475
ORF1ab/nsp3534A534PGccCcc11B.1.1.3180.000302
ORF1ab/nsp3534A534VgCcgTc11B.1.1.3200.018182
ORF1ab/nsp3534A534VgCcgTc11B.1.1.3290.003846
ORF1ab/nsp3534A534DgCcgAc11B.1.1.3350.012987
ORF1ab/nsp3534A534VgCcgTc11B.1.1.3540.004386
ORF1ab/nsp3534A534AgcCgcT11B.1.1.3540.004386
ORF1ab/nsp3534A534VgCcgTc11B.1.1.3620.005618
ORF1ab/nsp3534A534PGccCcc11B.1.1.3680.003086
ORF1ab/nsp3534A534DgCcgAc11B.1.1.3680.003086
ORF1ab/nsp3534A534HGCcCAc11B.1.1.3680.003086
ORF1ab/nsp3534A534AgcCgcT11B.1.1.3690.000446
ORF1ab/nsp3534A534AgcCgcA11B.1.1.3700.012658
ORF1ab/nsp3534A534VgCcgTc11B.1.1.3710.010417
ORF1ab/nsp3534A534AgcCgcT11B.1.1.3730.02381
ORF1ab/nsp3534A534VgCcgTc11B.1.1.3890.006061
ORF1ab/nsp3534A534VgCcgTc11B.1.1.3970.002252
ORF1ab/nsp3534A534AgcCgcT11B.1.1.3970.002252
ORF1ab/nsp3534A534VgCcgTc11B.1.1.4160.000905
ORF1ab/nsp3534A534VgCcgTc11B.1.1.4200.001006
ORF1ab/nsp3534A534AgcCgcT11B.1.1.4500.034483
ORF1ab/nsp3534A534AgcCgcT11B.1.1.5120.028571
ORF1ab/nsp3534A534delGCC---11B.1.1.5190.00004
ORF1ab/nsp3534A534VgCcgTc11B.1.1.5280.004808
ORF1ab/nsp3534A534AgcCgcT11B.1.1.570.011494
ORF1ab/nsp3534A534AgcCgcT11B.1.1.630.000386
ORF1ab/nsp3534A534VgCcgTc11B.1.1.740.00431
ORF1ab/nsp3534A534VgCcgTc11B.1.1.890.006061
ORF1ab/nsp3534A534SGccTcc11B.1.1040.00369
ORF1ab/nsp3534A534VgCcgTc11B.1.110.30.000718
ORF1ab/nsp3534A534AgcCgcT11B.1.1110.001175
ORF1ab/nsp3534A534VgCcgTc11B.1.1260.001276
ORF1ab/nsp3534A534VgCcgTc11B.1.1310.008772
ORF1ab/nsp3534A534VgCcgTc11B.1.1460.004237
ORF1ab/nsp3534A534AgcCgcT11B.1.1490.003425
ORF1ab/nsp3534A534delGCC---11B.1.1600.000031
ORF1ab/nsp3534A534AgcCgcT11B.1.160.80.001289
ORF1ab/nsp3534A534VgCcgTc11B.1.1700.00431
ORF1ab/nsp3534A534PGccCcc11B.1.1770.000013
ORF1ab/nsp3534A534EgCCgAA11B.1.1770.000013
ORF1ab/nsp3534A534DgCcgAc11B.1.1770.000013
ORF1ab/nsp3534A534VgCcgTc11B.1.177.100.000878
ORF1ab/nsp3534A534AgcCgcT11B.1.177.160.000664
ORF1ab/nsp3534A534VgCcgTc11B.1.177.170.000821
ORF1ab/nsp3534A534VgCcgTc11B.1.177.230.003236
ORF1ab/nsp3534A534AgcCgcT11B.1.177.410.0025
ORF1ab/nsp3534A534AgcCgcT11B.1.177.440.000519
ORF1ab/nsp3534A534HGCcCAc11B.1.177.450.000381
ORF1ab/nsp3534A534VgCcgTc11B.1.177.500.004695
ORF1ab/nsp3534A534VgCcgTc11B.1.177.560.000668
ORF1ab/nsp3534A534AgcCgcT11B.1.177.570.000281
ORF1ab/nsp3534A534VgCcgTc11B.1.177.650.000665
ORF1ab/nsp3534A534VgCcgTc11B.1.177.730.000566
ORF1ab/nsp3534A534GgCcgGc11B.1.177.810.000189
ORF1ab/nsp3534A534AgcCgcT11B.1.177.810.000189
ORF1ab/nsp3534A534AgcCgcT11B.1.177.850.005435
ORF1ab/nsp3534A534VgCcgTc11B.1.177.860.000183
ORF1ab/nsp3534A534delGCC---11B.1.177.90.001332
ORF1ab/nsp3534A534VgCcgTc11B.1.1890.004292
ORF1ab/nsp3534A534del1gCcg-c11B.1.20.000009
ORF1ab/nsp3534A534HGCcCAc11B.1.20.000009
ORF1ab/nsp3534A534PGccCcc11B.1.214.10.02
ORF1ab/nsp3534A534DgCcgAc11B.1.2210.000071
ORF1ab/nsp3534A534DgCcgAc11B.1.2320.000537
ORF1ab/nsp3534A534HGCcCAc11B.1.2320.000537
ORF1ab/nsp3534A534VgCcgTc11B.1.2360.002053
ORF1ab/nsp3534A534AgcCgcT11B.1.2400.000216
ORF1ab/nsp3534A534DgCcgAc11B.1.2430.00007
ORF1ab/nsp3534A534VgCcgTc11B.1.258.140.00098
ORF1ab/nsp3534A534AgcCgcT11B.1.258.170.000104
ORF1ab/nsp3534A534AgcCgcT11B.1.2650.001271
ORF1ab/nsp3534A534VgCcgTc11B.1.2700.005618
ORF1ab/nsp3534A534VgCcgTc11B.1.3150.006061
ORF1ab/nsp3534A534VgCcgTc11B.1.3240.001605
ORF1ab/nsp3534A534VgCcgTc11B.1.3330.010526
ORF1ab/nsp3534A534AgcCgcT11B.1.3400.004292
ORF1ab/nsp3534A534VgCcgTc11B.1.3400.004292
ORF1ab/nsp3534A534AgcCgcT11B.1.3460.001311
ORF1ab/nsp3534A534TGccAcc11B.1.3510.00003
ORF1ab/nsp3534A534AgcCgcT11B.1.351.20.000303
ORF1ab/nsp3534A534VgCcgTc11B.1.351.50.0006
ORF1ab/nsp3534A534TGccAcc11B.1.351.50.0006
ORF1ab/nsp3534A534delGCC---11B.1.360.000146
ORF1ab/nsp3534A534VgCcgTc11B.1.36.170.000494
ORF1ab/nsp3534A534AgcCgcT11B.1.36.170.000494
ORF1ab/nsp3534A534AgcCgcT11B.1.36.180.00042
ORF1ab/nsp3534A534AgcCgcT11B.1.36.360.000602
ORF1ab/nsp3534A534VgCcgTc11B.1.36.380.001642
ORF1ab/nsp3534A534PGccCcc11B.1.36.390.002217
ORF1ab/nsp3534A534del1gCcg-c11B.1.36.80.001
ORF1ab/nsp3534A534VgCcgTc11B.1.3670.000792
ORF1ab/nsp3534A534VgCcgTc11B.1.3710.001122
ORF1ab/nsp3534A534AgcCgcT11B.1.3980.002976
ORF1ab/nsp3534A534VgCcgTc11B.1.4000.000429
ORF1ab/nsp3534A534AgcCgcT11B.1.4040.001302
ORF1ab/nsp3534A534AgcCgcT11B.1.4060.006061
ORF1ab/nsp3534A534AgcCgcT11B.1.4110.003704
ORF1ab/nsp3534A534delGCC---11B.1.4150.014286
ORF1ab/nsp3534A534DgCcgAc11B.1.4160.001269
ORF1ab/nsp3534A534HGCcCAc11B.1.4160.001269
ORF1ab/nsp3534A534PGccCcc11B.1.4160.001269
ORF1ab/nsp3534A534VgCcgTc11B.1.4200.010417
ORF1ab/nsp3534A534HGCcCAc11B.1.4270.00005
ORF1ab/nsp3534A534PGccCcc11B.1.4270.00005
ORF1ab/nsp3534A534DgCcgAc11B.1.4270.00005
ORF1ab/nsp3534A534TGccAcc11B.1.4290.000024
ORF1ab/nsp3534A534PGccCcc11B.1.4290.000024
ORF1ab/nsp3534A534VgCcgTc11B.1.4330.003195
ORF1ab/nsp3534A534VgCcgTc11B.1.4360.001029
ORF1ab/nsp3534A534PGccCcc11B.1.4530.003236
ORF1ab/nsp3534A534AgcCgcT11B.1.4590.004082
ORF1ab/nsp3534A534VgCcgTc11B.1.4630.008065
ORF1ab/nsp3534A534VgCcgTc11B.1.4650.003802
ORF1ab/nsp3534A534TGccAcc11B.1.466.20.000391
ORF1ab/nsp3534A534VgCcgTc11B.1.466.20.000391
ORF1ab/nsp3534A534VgCcgTc11B.1.4700.001404
ORF1ab/nsp3534A534AgcCgcT11B.1.4710.002732
ORF1ab/nsp3534A534VgCcgTc11B.1.4930.025641
ORF1ab/nsp3534A534VgCcgTc11B.1.4950.009091
ORF1ab/nsp3534A534AgcCgcT11B.1.5030.002488
ORF1ab/nsp3534A534VgCcgTc11B.1.5090.000866
ORF1ab/nsp3534A534AgcCgcT11B.1.5170.000427
ORF1ab/nsp3534A534TGccAcc11B.1.5250.000113
ORF1ab/nsp3534A534TGccAcc11B.1.5260.000024
ORF1ab/nsp3534A534VgCcgTc11B.1.5560.007519
ORF1ab/nsp3534A534VgCcgTc11B.1.5600.00463
ORF1ab/nsp3534A534AgcCgcT11B.1.5680.001111
ORF1ab/nsp3534A534VgCcgTc11B.1.5700.002941
ORF1ab/nsp3534A534AgcCgcT11B.1.5740.002151
ORF1ab/nsp3534A534TGccAcc11B.1.5750.000303
ORF1ab/nsp3534A534VgCcgTc11B.1.575.10.002439
ORF1ab/nsp3534A534VgCcgTc11B.1.5790.011236
ORF1ab/nsp3534A534TGccAcc11B.1.5800.004065
ORF1ab/nsp3534A534AgcCgcT11B.1.5820.000491
ORF1ab/nsp3534A534AgcCgcT11B.1.5880.00091
ORF1ab/nsp3534A534VgCcgTc11B.1.5950.000261
ORF1ab/nsp3534A534SGccTcc11B.1.5960.000087
ORF1ab/nsp3534A534PGccCcc11B.1.5960.000087
ORF1ab/nsp3534A534VgCcgTc11B.1.5990.00365
ORF1ab/nsp3534A534VgCcgTc11B.1.6030.010638
ORF1ab/nsp3534A534TGccAcc11B.1.6090.000479
ORF1ab/nsp3534A534VgCcgTc11B.1.6090.000479
ORF1ab/nsp3534A534SGccTcc11B.1.6090.000479
ORF1ab/nsp3534A534VgCcgTc11B.1.6100.003546
ORF1ab/nsp3534A534FGCcTTc11B.1.617.10.000129
ORF1ab/nsp3534A534delGCC---11B.1.617.20.000004
ORF1ab/nsp3534A534VgCcgTc11B.1.6190.000871
ORF1ab/nsp3534A534TGccAcc11B.1.6210.000089
ORF1ab/nsp3534A534AgcCgcT11B.1.621.10.000506
ORF1ab/nsp3534A534AgcCgcT11B.1.6230.000536
ORF1ab/nsp3534A534VgCcgTc11B.1.6250.002353
ORF1ab/nsp3534A534VgCcgTc11B.1.6270.00202
ORF1ab/nsp3534A534AgcCgcG11B.1.6360.006711
ORF1ab/nsp3534A534PGccCcc11B.1.6370.000073
ORF1ab/nsp3534A534VgCcgTc11B.1.780.008547
ORF1ab/nsp3534A534AgcCgcT11B.230.002924
ORF1ab/nsp3534A534delGCC---11B.570.015152
ORF1ab/nsp3534A534AgcCgcT11B.60.00091
ORF1ab/nsp3534A534AgcCgcA11B.6.60.000889
ORF1ab/nsp3534A534AgcCgcT11C.140.004329
ORF1ab/nsp3534A534VgCcgTc11C.160.00106
ORF1ab/nsp3534A534VgCcgTc11C.360.000911
ORF1ab/nsp3534A534TGccAcc11C.36.10.004149
ORF1ab/nsp3534A534TGccAcc11C.370.000116
ORF1ab/nsp3534A534VgCcgTc11D.20.000075
ORF1ab/nsp3534A534DgCcgAc11D.20.000075
ORF1ab/nsp3534A534SGccTcc11D.20.000075
ORF1ab/nsp3534A534HGCcCAc11D.20.000075
ORF1ab/nsp3534A534VgCcgTc11L.10.001905
ORF1ab/nsp3534A534VgCcgTc11N.10.016949
ORF1ab/nsp3534A534AgcCgcT11N.40.004255
ORF1ab/nsp3534A534VgCcgTc11N.50.001767
ORF1ab/nsp3534A534AgcCgcT11P.1.100.000269
ORF1ab/nsp3534A534PGccCcc11P.1.140.000048
ORF1ab/nsp3534A534VgCcgTc11P.1.160.000374
ORF1ab/nsp3534A534TGccAcc11P.1.170.000162
ORF1ab/nsp3534A534AgcCgcT11P.1.60.001946
ORF1ab/nsp3534A534DgCcgAc11P.1.70.000319
ORF1ab/nsp3534A534AgcCgcT11P.20.000187
ORF1ab/nsp3534A534AgcCgcT11Q.10.000126
ORF1ab/nsp3534A534AgcCgcT11Q.80.000165
ORF1ab/nsp3534A534SGccTcc11Q.80.000165
ORF1ab/nsp3534A534delGCC---11U.30.003861
ORF1ab/nsp3534A534AgcCgcT11U.30.003861
ORF1ab/nsp3534A534VgCcgTc11W.20.004831