CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF1ab/nsp3 : CodonNum = 527

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF1ab/nsp3527V527VV1345VsyngtGgtT11508106230.9230974298-4300
ORF1ab/nsp3527V527VV1345VsyngtGgtC115087400.06430314298-4300
ORF1ab/nsp3527V527VV1345VsyngtGgtA115081450.01259994298-4300
ORF1ab/nsp3527V527LV1345LnonsynGtgTtg2342260.9658124298-4300
ORF1ab/nsp3527V527LV1345LnonsynGtgCtg23460.0256414298-4300
ORF1ab/nsp3527V527LV1345LnonsynGtGCtA23410.00427354298-4300
ORF1ab/nsp3527V527LV1345LnonsynGtGTtA23410.00427354298-4300
ORF1ab/nsp3527V527AV1345AnonsyngTggCg17317314298-4300
ORF1ab/nsp3527V527delV1345deldelGTG---464614298-4300
ORF1ab/nsp3527V527MV1345MnonsynGtgAtg353514298-4300
ORF1ab/nsp3527V527GV1345GnonsyngTggGg12110.9166674298-4300
ORF1ab/nsp3527V527GV1345GnonsyngTGgGC1210.08333334298-4300
ORF1ab/nsp3527V527EV1345EnonsyngTggAg860.754298-4300
ORF1ab/nsp3527V527EV1345EnonsyngTGgAA820.254298-4300
ORF1ab/nsp3527V527IV1345InonsynGtGAtA3314298-4300
ORF1ab/nsp3527V527XV1345XnonsynGTgTAg320.6666674298-4300
ORF1ab/nsp3527V527del1V1345del1delgtGgt-320.6666674298-4300
ORF1ab/nsp3527V527del1V1345del1delGtg-tg310.3333334298-4300
ORF1ab/nsp3527V527XV1345XnonsynGTGTAA310.3333334298-4300
ORF1ab/nsp3527V527KV1345KnonsynGTgAAg210.54298-4300
ORF1ab/nsp3527V527KV1345KnonsynGTGAAA210.54298-4300
ORF1ab/nsp3527V527del2V1345del2delgTGg--1114298-4300
ORF1ab/nsp3527V527FV1345FnonsynGtGTtT1114298-4300
ORF1ab/nsp3527V527YV1345YnonsynGTGTAT1114298-4300
ORF1ab/nsp3527V527DV1345DnonsyngTGgAT1114298-4300

Details of the mutation no within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF1ab/nsp3527V527VgtGgtT1062311508All0.002032
ORF1ab/nsp3527V527VgtGgtC74011508All0.000142
ORF1ab/nsp3527V527VgtGgtA14511508All0.000028
ORF1ab/nsp3527V527VgtGgtT9711652AY.40.001511
ORF1ab/nsp3527V527VgtGgtC6781652AY.40.001055
ORF1ab/nsp3527V527VgtGgtA31652AY.40.000005
ORF1ab/nsp3527V527VgtGgtT14241511B.1.1.70.001275
ORF1ab/nsp3527V527VgtGgtA861511B.1.1.70.000077
ORF1ab/nsp3527V527VgtGgtC11511B.1.1.70.000001
ORF1ab/nsp3527V527VgtGgtT799799P.1.100.215306
ORF1ab/nsp3527V527VgtGgtT740769B.1.617.20.002786
ORF1ab/nsp3527V527VgtGgtC27769B.1.617.20.000102
ORF1ab/nsp3527V527VgtGgtA2769B.1.617.20.000008
ORF1ab/nsp3527V527VgtGgtT680680AY.1110.124542
ORF1ab/nsp3527V527VgtGgtT629632AY.430.002787
ORF1ab/nsp3527V527VgtGgtA2632AY.430.000009
ORF1ab/nsp3527V527VgtGgtC1632AY.430.000004
ORF1ab/nsp3527V527VgtGgtT606606B.1.1.2220.123623
ORF1ab/nsp3527V527VgtGgtT381384AY.250.002292
ORF1ab/nsp3527V527VgtGgtA3384AY.250.000018
ORF1ab/nsp3527V527VgtGgtT290293B.10.002656
ORF1ab/nsp3527V527VgtGgtA3293B.10.000027
ORF1ab/nsp3527V527VgtGgtT250250B.1.2340.032986
ORF1ab/nsp3527V527LGtgTtg226234All0.000043
ORF1ab/nsp3527V527LGtgCtg6234All0.000001
ORF1ab/nsp3527V527LGtGTtA1234All0
ORF1ab/nsp3527V527LGtGCtA1234All0
ORF1ab/nsp3527V527VgtGgtT200203AY.1030.001242
ORF1ab/nsp3527V527VgtGgtA3203AY.1030.000019
ORF1ab/nsp3527V527VgtGgtT174196AY.980.013745
ORF1ab/nsp3527V527VgtGgtC22196AY.980.001738
ORF1ab/nsp3527V527VgtGgtT178178B.1.2580.011845
ORF1ab/nsp3527V527VgtGgtT176177B.1.1770.002317
ORF1ab/nsp3527V527VgtGgtA1177B.1.1770.000013
ORF1ab/nsp3527V527AgTggCg173173All0.000033
ORF1ab/nsp3527V527VgtGgtT162165B.1.20.001426
ORF1ab/nsp3527V527VgtGgtA2165B.1.20.000018
ORF1ab/nsp3527V527VgtGgtC1165B.1.20.000009
ORF1ab/nsp3527V527VgtGgtT118118P.1.140.005641
ORF1ab/nsp3527V527VgtGgtT116117P.10.001827
ORF1ab/nsp3527V527VgtGgtA1117P.10.000016
ORF1ab/nsp3527V527VgtGgtT103111AY.440.000627
ORF1ab/nsp3527V527VgtGgtA8111AY.440.000049
ORF1ab/nsp3527V527VgtGgtT101101B.1.1.2190.505
ORF1ab/nsp3527V527VgtGgtT9797AY.1190.003425
ORF1ab/nsp3527V527VgtGgtT8687AY.390.002125
ORF1ab/nsp3527V527VgtGgtC187AY.390.000025
ORF1ab/nsp3527V527VgtGgtT8686P.1.10.10.699187
ORF1ab/nsp3527V527VgtGgtT7777B.1.2210.00547
ORF1ab/nsp3527V527AgTggCg7777B.1.617.20.00029
ORF1ab/nsp3527V527VgtGgtT7375B.1.10.001324
ORF1ab/nsp3527V527VgtGgtA175B.1.10.000018
ORF1ab/nsp3527V527VgtGgtC175B.1.10.000018
ORF1ab/nsp3527V527VgtGgtT6970AY.1020.001829
ORF1ab/nsp3527V527VgtGgtA170AY.1020.000027
ORF1ab/nsp3527V527VgtGgtT6769AY.1200.002491
ORF1ab/nsp3527V527VgtGgtA269AY.1200.000074
ORF1ab/nsp3527V527VgtGgtT6868B.1.351.20.020575
ORF1ab/nsp3527V527VgtGgtT6060AY.410.017637
ORF1ab/nsp3527V527VgtGgtT5656B.1.36.290.028971
ORF1ab/nsp3527V527VgtGgtT5555AY.260.001557
ORF1ab/nsp3527V527VgtGgtT5252AY.4.50.00559
ORF1ab/nsp3527V527VgtGgtT4949AY.50.001012
ORF1ab/nsp3527V527VgtGgtT4848B.1.3510.001427
ORF1ab/nsp3527V527VgtGgtT4747B.1.4290.001106
ORF1ab/nsp3527V527delGTG---4646All0.000009
ORF1ab/nsp3527V527VgtGgtT4444B.1.1130.6875
ORF1ab/nsp3527V527VgtGgtT3943AY.30.000388
ORF1ab/nsp3527V527VgtGgtA443AY.30.00004
ORF1ab/nsp3527V527VgtGgtT3640B.1.1.5190.00143
ORF1ab/nsp3527V527VgtGgtA340B.1.1.5190.000119
ORF1ab/nsp3527V527VgtGgtC140B.1.1.5190.00004
ORF1ab/nsp3527V527VgtGgtT3939B.1.1.2140.002163
ORF1ab/nsp3527V527VgtGgtT3738AY.1000.001702
ORF1ab/nsp3527V527VgtGgtA138AY.1000.000046
ORF1ab/nsp3527V527VgtGgtT3737B.1.6090.017737
ORF1ab/nsp3527V527MGtgAtg3535All0.000007
ORF1ab/nsp3527V527LGtgTtg3333B.1.1.70.00003
ORF1ab/nsp3527V527VgtGgtT3033Q.30.004351
ORF1ab/nsp3527V527VgtGgtC333Q.30.000435
ORF1ab/nsp3527V527LGtgTtg3132B.1.1770.000408
ORF1ab/nsp3527V527LGtgCtg132B.1.1770.000013
ORF1ab/nsp3527V527LGtgTtg3232B.1.617.20.00012
ORF1ab/nsp3527V527VgtGgtT3131AY.840.013561
ORF1ab/nsp3527V527VgtGgtT3131C.160.032874
ORF1ab/nsp3527V527VgtGgtT2930B.1.5260.000682
ORF1ab/nsp3527V527VgtGgtA130B.1.5260.000024
ORF1ab/nsp3527V527VgtGgtT3030B.1.6370.002192
ORF1ab/nsp3527V527VgtGgtT2929C.36.3.10.078804
ORF1ab/nsp3527V527VgtGgtT2828AY.290.000442
ORF1ab/nsp3527V527VgtGgtT2828B.1.1.2690.037889
ORF1ab/nsp3527V527AgTggCg2626AY.1110.004762
ORF1ab/nsp3527V527VgtGgtT2425AY.460.002498
ORF1ab/nsp3527V527VgtGgtA125AY.460.000104
ORF1ab/nsp3527V527VgtGgtT2525B.1.4050.308642
ORF1ab/nsp3527V527VgtGgtT2424AY.4.20.000521
ORF1ab/nsp3527V527AgTggCg2424AY.430.000106
ORF1ab/nsp3527V527VgtGgtT2424AY.60.000987
ORF1ab/nsp3527V527VgtGgtT2121B.1.214.20.01259
ORF1ab/nsp3527V527VgtGgtT2020Q.20.01227
ORF1ab/nsp3527V527VgtGgtT1818AY.420.000724
ORF1ab/nsp3527V527VgtGgtT1818B.1.5960.001568
ORF1ab/nsp3527V527LGtgTtg1717B.1.1.3690.007586
ORF1ab/nsp3527V527delGTG---1717B.1.1.70.000015
ORF1ab/nsp3527V527VgtGgtT1717B.1.177.160.011296
ORF1ab/nsp3527V527VgtGgtT1616AY.200.000622
ORF1ab/nsp3527V527VgtGgtT1616B.1.4040.020833
ORF1ab/nsp3527V527VgtGgtT1616B.1.5650.012966
ORF1ab/nsp3527V527VgtGgtT1515B.1.1.3680.046296
ORF1ab/nsp3527V527VgtGgtA815B.1.177.450.00305
ORF1ab/nsp3527V527VgtGgtT715B.1.177.450.002669
ORF1ab/nsp3527V527VgtGgtT1415B.1.2430.000974
ORF1ab/nsp3527V527VgtGgtA115B.1.2430.00007
ORF1ab/nsp3527V527VgtGgtT1515B.1.2470.223881
ORF1ab/nsp3527V527LGtgTtg1414AY.430.000062
ORF1ab/nsp3527V527LGtgTtg1414AY.470.000435
ORF1ab/nsp3527V527VgtGgtT1414AY.670.0065
ORF1ab/nsp3527V527VgtGgtT1414AY.920.004022
ORF1ab/nsp3527V527VgtGgtT1314B.1.360.001897
ORF1ab/nsp3527V527VgtGgtA114B.1.360.000146
ORF1ab/nsp3527V527AgTggCg1414B.1.36.380.022989
ORF1ab/nsp3527V527VgtGgtT1313AY.470.000404
ORF1ab/nsp3527V527VgtGgtT1313B.1.177.560.008678
ORF1ab/nsp3527V527VgtGgtT1313B.1.617.10.001677
ORF1ab/nsp3527V527VgtGgtT1313B.1.6210.001151
ORF1ab/nsp3527V527VgtGgtT1313B.1.6380.684211
ORF1ab/nsp3527V527GgTggGg1112All0.000002
ORF1ab/nsp3527V527GgTGgGC112All0
ORF1ab/nsp3527V527VgtGgtT1112AY.1210.001488
ORF1ab/nsp3527V527VgtGgtC112AY.1210.000135
ORF1ab/nsp3527V527VgtGgtT1212AY.330.000801
ORF1ab/nsp3527V527VgtGgtT1212Q.80.001979
ORF1ab/nsp3527V527VgtGgtT1111AY.230.000767
ORF1ab/nsp3527V527VgtGgtT1111B.1.1.3060.004822
ORF1ab/nsp3527V527LGtgTtg1010AY.1030.000062
ORF1ab/nsp3527V527VgtGgtT1010AY.1100.001127
ORF1ab/nsp3527V527VgtGgtT1010AY.98.10.000484
ORF1ab/nsp3527V527VgtGgtT1010C.370.001161
ORF1ab/nsp3527V527VgtGgtT99A.23.10.006338
ORF1ab/nsp3527V527VgtGgtT99B.1.1.2840.000967
ORF1ab/nsp3527V527VgtGgtT99B.1.1.500.00611
ORF1ab/nsp3527V527AgTggCg99B.1.1.70.000008
ORF1ab/nsp3527V527VgtGgtT99B.1.1.700.00307
ORF1ab/nsp3527V527VgtGgtT89B.1.1600.00025
ORF1ab/nsp3527V527VgtGgtA19B.1.1600.000031
ORF1ab/nsp3527V527VgtGgtT99B.1.177.570.002529
ORF1ab/nsp3527V527VgtGgtT89B.1.4270.000404
ORF1ab/nsp3527V527VgtGgtA19B.1.4270.00005
ORF1ab/nsp3527V527VgtGgtT88A.2.40.026936
ORF1ab/nsp3527V527EgTggAg68All0.000001
ORF1ab/nsp3527V527EgTGgAA28All0
ORF1ab/nsp3527V527LGtgTtg88AY.340.000776
ORF1ab/nsp3527V527VgtGgtT88AY.34.10.00408
ORF1ab/nsp3527V527VgtGgtT88AY.610.000838
ORF1ab/nsp3527V527VgtGgtT88B.1.1.2830.186047
ORF1ab/nsp3527V527VgtGgtT88B.1.1100.036199
ORF1ab/nsp3527V527GgTggGg88B.1.160.290.033755
ORF1ab/nsp3527V527VgtGgtT88B.1.4210.059701
ORF1ab/nsp3527V527VgtGgtT77AY.1060.002344
ORF1ab/nsp3527V527delGTG---77AY.40.000011
ORF1ab/nsp3527V527VgtGgtT77AY.46.60.000505
ORF1ab/nsp3527V527VgtGgtT77AY.590.003708
ORF1ab/nsp3527V527VgtGgtT77AY.99.20.000645
ORF1ab/nsp3527V527VgtGgtT77B.1.1.10.002287
ORF1ab/nsp3527V527VgtGgtT77B.1.177.120.001062
ORF1ab/nsp3527V527VgtGgtT77B.1.36.80.007
ORF1ab/nsp3527V527VgtGgtT77B.1.4020.068627
ORF1ab/nsp3527V527VgtGgtT77P.1.120.003388
ORF1ab/nsp3527V527VgtGgtT77P.1.150.001626
ORF1ab/nsp3527V527VgtGgtT66AY.1170.000507
ORF1ab/nsp3527V527VgtGgtT66AY.240.002586
ORF1ab/nsp3527V527VgtGgtT66AY.340.000582
ORF1ab/nsp3527V527VgtGgtT56AY.39.10.000198
ORF1ab/nsp3527V527VgtGgtA16AY.39.10.00004
ORF1ab/nsp3527V527VgtGgtT66AY.690.00112
ORF1ab/nsp3527V527VgtGgtT66AY.90.000406
ORF1ab/nsp3527V527VgtGgtT66AY.9.20.00022
ORF1ab/nsp3527V527LGtgTtg66B.10.000055
ORF1ab/nsp3527V527MGtgAtg66B.1.1.70.000005
ORF1ab/nsp3527V527LGtgTtg66B.1.20.000053
ORF1ab/nsp3527V527VgtGgtT66B.1.5450.086957
ORF1ab/nsp3527V527VgtGgtT55AY.1050.003215
ORF1ab/nsp3527V527VgtGgtT55AY.1090.003698
ORF1ab/nsp3527V527VgtGgtT35AY.120.10.000963
ORF1ab/nsp3527V527VgtGgtA25AY.120.10.000642
ORF1ab/nsp3527V527LGtgTtg55AY.250.00003
ORF1ab/nsp3527V527LGtgTtg45AY.30.00004
ORF1ab/nsp3527V527LGtGTtA15AY.30.00001
ORF1ab/nsp3527V527VgtGgtT55AY.3.10.000426
ORF1ab/nsp3527V527VgtGgtT55AY.360.000741
ORF1ab/nsp3527V527VgtGgtT55AY.740.000578
ORF1ab/nsp3527V527VgtGgtT55AY.75.10.000902
ORF1ab/nsp3527V527VgtGgtT55B.1.1.250.002843
ORF1ab/nsp3527V527VgtGgtT55B.1.1.390.002548
ORF1ab/nsp3527V527VgtGgtT55B.1.177.810.000947
ORF1ab/nsp3527V527MGtgAtg55B.1.20.000044
ORF1ab/nsp3527V527VgtGgtT55B.1.2390.006105
ORF1ab/nsp3527V527VgtGgtT55B.1.5300.035714
ORF1ab/nsp3527V527VgtGgtT55B.1.621.10.002529
ORF1ab/nsp3527V527VgtGgtT55C.350.00387
ORF1ab/nsp3527V527LGtgTtg55P.10.000079
ORF1ab/nsp3527V527VgtGgtT44A.2.50.001996
ORF1ab/nsp3527V527VgtGgtT44AY.10.001583
ORF1ab/nsp3527V527VgtGgtT44AY.1180.000251
ORF1ab/nsp3527V527VgtGgtT44AY.16.10.00188
ORF1ab/nsp3527V527VgtGgtT44AY.220.008368
ORF1ab/nsp3527V527MGtgAtg44AY.250.000024
ORF1ab/nsp3527V527LGtgTtg44AY.40.000006
ORF1ab/nsp3527V527VgtGgtT44AY.450.000487
ORF1ab/nsp3527V527VgtGgtT44AY.46.40.000658
ORF1ab/nsp3527V527VgtGgtT44AY.580.00363
ORF1ab/nsp3527V527VgtGgtT44AY.700.000834
ORF1ab/nsp3527V527VgtGgtT44AY.750.000224
ORF1ab/nsp3527V527VgtGgtT44AY.870.003331
ORF1ab/nsp3527V527VgtGgtT44B0.000511
ORF1ab/nsp3527V527VgtGgtT44B.1.1.280.001245
ORF1ab/nsp3527V527VgtGgtT34B.1.2400.000647
ORF1ab/nsp3527V527VgtGgtC14B.1.2400.000216
ORF1ab/nsp3527V527VgtGgtT44B.1.36.90.012862
ORF1ab/nsp3527V527VgtGgtT44B.1.5240.005626
ORF1ab/nsp3527V527VgtGgtT44B.1.5250.000453
ORF1ab/nsp3527V527LGtgTtg44B.1.617.10.000516
ORF1ab/nsp3527V527VgtGgtT44B.1.6200.003784
ORF1ab/nsp3527V527VgtGgtT44C.360.003643
ORF1ab/nsp3527V527VgtGgtT44P.1.10.001271
ORF1ab/nsp3527V527VgtGgtT44P.20.000747
ORF1ab/nsp3527V527VgtGgtT44Q.10.000505
ORF1ab/nsp3527V527IGtGAtA33All0.000001
ORF1ab/nsp3527V527del1gtGgt-23All0
ORF1ab/nsp3527V527XGTgTAg23All0
ORF1ab/nsp3527V527del1Gtg-tg13All0
ORF1ab/nsp3527V527XGTGTAA13All0
ORF1ab/nsp3527V527VgtGgtT33AY.1080.003308
ORF1ab/nsp3527V527VgtGgtT33AY.1160.00086
ORF1ab/nsp3527V527VgtGgtT33AY.120.000948
ORF1ab/nsp3527V527AgTggCg33AY.200.000117
ORF1ab/nsp3527V527AgTggCg33AY.250.000018
ORF1ab/nsp3527V527AgTggCg33AY.290.000047
ORF1ab/nsp3527V527EgTggAg23AY.30.00002
ORF1ab/nsp3527V527EgTGgAA13AY.30.00001
ORF1ab/nsp3527V527delGTG---33AY.4.50.000322
ORF1ab/nsp3527V527AgTggCg33AY.440.000018
ORF1ab/nsp3527V527VgtGgtT33AY.620.001307
ORF1ab/nsp3527V527VgtGgtT33AY.7.10.000338
ORF1ab/nsp3527V527VgtGgtT33AY.9.10.000251
ORF1ab/nsp3527V527VgtGgtT33B.1.1.2740.015152
ORF1ab/nsp3527V527VgtGgtT33B.1.1.630.001157
ORF1ab/nsp3527V527delGTG---33B.1.1770.00004
ORF1ab/nsp3527V527VgtGgtT33B.1.258.170.000312
ORF1ab/nsp3527V527MGtgAtg33B.1.3690.000856
ORF1ab/nsp3527V527VgtGgtT33B.1.4530.009709
ORF1ab/nsp3527V527VgtGgtT33B.1.5170.001281
ORF1ab/nsp3527V527VgtGgtT33B.1.5750.00091
ORF1ab/nsp3527V527VgtGgtT33B.1.5770.002062
ORF1ab/nsp3527V527VgtGgtT33B.1.5950.000783
ORF1ab/nsp3527V527VgtGgtT33D.20.000225
ORF1ab/nsp3527V527AgTggCg33P.10.000047
ORF1ab/nsp3527V527LGtgCtg33P.1.150.000697
ORF1ab/nsp3527V527VgtGgtT33P.1.170.000485
ORF1ab/nsp3527V527VgtGgtT22AD.20.000438
ORF1ab/nsp3527V527KGTGAAA12All0
ORF1ab/nsp3527V527KGTgAAg12All0
ORF1ab/nsp3527V527VgtGgtT22AY.1130.000285
ORF1ab/nsp3527V527VgtGgtT22AY.116.10.000623
ORF1ab/nsp3527V527VgtGgtT22AY.130.000322
ORF1ab/nsp3527V527VgtGgtT22AY.190.002281
ORF1ab/nsp3527V527MGtgAtg22AY.200.000078
ORF1ab/nsp3527V527EgTggAg12AY.250.000006
ORF1ab/nsp3527V527EgTGgAA12AY.250.000006
ORF1ab/nsp3527V527KGTgAAg12AY.250.000006
ORF1ab/nsp3527V527KGTGAAA12AY.250.000006
ORF1ab/nsp3527V527XGTgTAg12AY.30.00001
ORF1ab/nsp3527V527XGTGTAA12AY.30.00001
ORF1ab/nsp3527V527VgtGgtT22AY.320.001065
ORF1ab/nsp3527V527VgtGgtT22AY.370.000632
ORF1ab/nsp3527V527MGtgAtg22AY.40.000003
ORF1ab/nsp3527V527VgtGgtT22AY.4.2.10.000298
ORF1ab/nsp3527V527VgtGgtT22AY.4.40.000818
ORF1ab/nsp3527V527VgtGgtT22AY.400.001929
ORF1ab/nsp3527V527GgTggGg12AY.430.000004
ORF1ab/nsp3527V527GgTGgGC12AY.430.000004
ORF1ab/nsp3527V527LGtgTtg22AY.440.000012
ORF1ab/nsp3527V527LGtgTtg22AY.46.60.000144
ORF1ab/nsp3527V527VgtGgtT22AY.570.001312
ORF1ab/nsp3527V527VgtGgtT22AY.600.001876
ORF1ab/nsp3527V527LGtgCtg12AY.840.000437
ORF1ab/nsp3527V527LGtGCtA12AY.840.000437
ORF1ab/nsp3527V527VgtGgtT22AY.990.002099
ORF1ab/nsp3527V527VgtGgtT22AZ.20.001642
ORF1ab/nsp3527V527delGTG---22B.10.000018
ORF1ab/nsp3527V527VgtGgtT22B.1.1.1890.003026
ORF1ab/nsp3527V527VgtGgtT22B.1.1.2160.001781
ORF1ab/nsp3527V527VgtGgtT22B.1.1.3180.000604
ORF1ab/nsp3527V527VgtGgtT22B.1.1.330.000842
ORF1ab/nsp3527V527VgtGgtT22B.1.1.4130.013793
ORF1ab/nsp3527V527VgtGgtT22B.1.1.4340.000697
ORF1ab/nsp3527V527VgtGgtT22B.1.1280.001271
ORF1ab/nsp3527V527VgtGgtT22B.1.1390.001466
ORF1ab/nsp3527V527VgtGgtT22B.1.177.40.000422
ORF1ab/nsp3527V527VgtGgtT22B.1.177.670.015267
ORF1ab/nsp3527V527VgtGgtT12B.1.177.70.000165
ORF1ab/nsp3527V527VgtGgtA12B.1.177.70.000165
ORF1ab/nsp3527V527VgtGgtT22B.1.177.750.002081
ORF1ab/nsp3527V527VgtGgtT22B.1.177.860.000367
ORF1ab/nsp3527V527LGtgTtg22B.1.2410.001623
ORF1ab/nsp3527V527VgtGgtT22B.1.258.140.001961
ORF1ab/nsp3527V527VgtGgtT22B.1.2980.004228
ORF1ab/nsp3527V527VgtGgtT12B.1.3690.000285
ORF1ab/nsp3527V527VgtGgtC12B.1.3690.000285
ORF1ab/nsp3527V527VgtGgtT22B.1.5820.000981
ORF1ab/nsp3527V527delGTG---22B.1.617.20.000008
ORF1ab/nsp3527V527VgtGgtT22B.1.910.004149
ORF1ab/nsp3527V527VgtGgtT22C.36.30.001134
ORF1ab/nsp3527V527LGtgTtg22D.20.00015
ORF1ab/nsp3527V527VgtGgtT22P.1.130.001797
ORF1ab/nsp3527V527VgtGgtT22P.1.60.003891
ORF1ab/nsp3527V527VgtGgtT22R.10.00018
ORF1ab/nsp3527V527GgTggGg110.055556
ORF1ab/nsp3527V527VgtGgtT11A0.000387
ORF1ab/nsp3527V527DgTGgAT11All0
ORF1ab/nsp3527V527YGTGTAT11All0
ORF1ab/nsp3527V527del2gTGg--11All0
ORF1ab/nsp3527V527FGtGTtT11All0
ORF1ab/nsp3527V527VgtGgtT11AV.10.005051
ORF1ab/nsp3527V527AgTggCg11AY.1020.000027
ORF1ab/nsp3527V527LGtgTtg11AY.1020.000027
ORF1ab/nsp3527V527MGtgAtg11AY.1020.000027
ORF1ab/nsp3527V527GgTggGg11AY.1030.000006
ORF1ab/nsp3527V527MGtgAtg11AY.1110.000183
ORF1ab/nsp3527V527MGtgAtg11AY.120.10.000321
ORF1ab/nsp3527V527LGtgTtg11AY.16.10.00047
ORF1ab/nsp3527V527IGtGAtA11AY.230.00007
ORF1ab/nsp3527V527IGtGAtA11AY.250.000006
ORF1ab/nsp3527V527MGtgAtg11AY.260.000028
ORF1ab/nsp3527V527VgtGgtT11AY.29.10.000221
ORF1ab/nsp3527V527LGtgTtg11AY.3.10.000085
ORF1ab/nsp3527V527XGTgTAg11AY.3.10.000085
ORF1ab/nsp3527V527DgTGgAT11AY.3.10.000085
ORF1ab/nsp3527V527YGTGTAT11AY.3.10.000085
ORF1ab/nsp3527V527FGtGTtT11AY.3.10.000085
ORF1ab/nsp3527V527EgTggAg11AY.3.10.000085
ORF1ab/nsp3527V527VgtGgtT11AY.300.000396
ORF1ab/nsp3527V527VgtGgtT11AY.380.000499
ORF1ab/nsp3527V527AgTggCg11AY.390.000025
ORF1ab/nsp3527V527LGtgTtg11AY.39.10.00004
ORF1ab/nsp3527V527LGtgTtg11AY.4.20.000022
ORF1ab/nsp3527V527VgtGgtT11AY.4.30.000842
ORF1ab/nsp3527V527del2gTGg--11AY.430.000004
ORF1ab/nsp3527V527AgTggCg11AY.460.000104
ORF1ab/nsp3527V527VgtGgtT11AY.46.10.001027
ORF1ab/nsp3527V527delGTG---11AY.46.20.000635
ORF1ab/nsp3527V527VgtGgtT11AY.490.003195
ORF1ab/nsp3527V527EgTggAg11AY.50.000021
ORF1ab/nsp3527V527AgTggCg11AY.50.000021
ORF1ab/nsp3527V527VgtGgtT11AY.5.40.000277
ORF1ab/nsp3527V527VgtGgtT11AY.530.000288
ORF1ab/nsp3527V527VgtGgtT11AY.540.000095
ORF1ab/nsp3527V527VgtGgtT11AY.550.000917
ORF1ab/nsp3527V527del1gtGgt-11AY.560.001605
ORF1ab/nsp3527V527VgtGgtT11AY.650.000533
ORF1ab/nsp3527V527AgTggCg11AY.650.000533
ORF1ab/nsp3527V527VgtGgtT11AY.70.000196
ORF1ab/nsp3527V527VgtGgtT11AY.7.20.000559
ORF1ab/nsp3527V527del1Gtg-tg11AY.710.000475
ORF1ab/nsp3527V527MGtgAtg11AY.710.000475
ORF1ab/nsp3527V527MGtgAtg11AY.770.001127
ORF1ab/nsp3527V527VgtGgtT11AY.770.001127
ORF1ab/nsp3527V527VgtGgtC11AY.780.001541
ORF1ab/nsp3527V527VgtGgtT11AY.810.001992
ORF1ab/nsp3527V527MGtgAtg11AY.840.000437
ORF1ab/nsp3527V527IGtGAtA11AY.840.000437
ORF1ab/nsp3527V527VgtGgtT11AY.890.004902
ORF1ab/nsp3527V527VgtGgtT11AY.900.000684
ORF1ab/nsp3527V527VgtGgtT11AY.910.00073
ORF1ab/nsp3527V527VgtGgtT11AY.930.000273
ORF1ab/nsp3527V527LGtgTtg11AY.950.000761
ORF1ab/nsp3527V527MGtgAtg11AY.98.10.000048
ORF1ab/nsp3527V527delGTG---11AY.990.001049
ORF1ab/nsp3527V527MGtgAtg11B0.000128
ORF1ab/nsp3527V527MGtgAtg11B.10.000009
ORF1ab/nsp3527V527AgTggCg11B.10.000009
ORF1ab/nsp3527V527EgTggAg11B.1.10.000018
ORF1ab/nsp3527V527LGtgCtg11B.1.10.000018
ORF1ab/nsp3527V527delGTG---11B.1.10.000018
ORF1ab/nsp3527V527VgtGgtT11B.1.1.1610.003534
ORF1ab/nsp3527V527VgtGgtT11B.1.1.170.016667
ORF1ab/nsp3527V527LGtgTtg11B.1.1.2140.000055
ORF1ab/nsp3527V527VgtGgtT11B.1.1.2200.001859
ORF1ab/nsp3527V527VgtGgtT11B.1.1.2610.008621
ORF1ab/nsp3527V527VgtGgtA11B.1.1.2630.001558
ORF1ab/nsp3527V527VgtGgtT11B.1.1.270.00565
ORF1ab/nsp3527V527VgtGgtT11B.1.1.2700.010309
ORF1ab/nsp3527V527VgtGgtT11B.1.1.3020.002075
ORF1ab/nsp3527V527VgtGgtT11B.1.1.3110.000358
ORF1ab/nsp3527V527VgtGgtT11B.1.1.3160.000925
ORF1ab/nsp3527V527VgtGgtT11B.1.1.3260.001761
ORF1ab/nsp3527V527VgtGgtT11B.1.1.3590.027778
ORF1ab/nsp3527V527VgtGgtT11B.1.1.3650.005587
ORF1ab/nsp3527V527LGtgTtg11B.1.1.370.000193
ORF1ab/nsp3527V527VgtGgtT11B.1.1.370.000193
ORF1ab/nsp3527V527VgtGgtT11B.1.1.3700.012658
ORF1ab/nsp3527V527VgtGgtT11B.1.1.3720.000689
ORF1ab/nsp3527V527VgtGgtT11B.1.1.4090.002833
ORF1ab/nsp3527V527VgtGgtT11B.1.1.5170.006803
ORF1ab/nsp3527V527delGTG---11B.1.1.5190.00004
ORF1ab/nsp3527V527VgtGgtT11B.1.1.540.003021
ORF1ab/nsp3527V527VgtGgtT11B.1.1.610.008772
ORF1ab/nsp3527V527LGtgTtg11B.1.1.630.000386
ORF1ab/nsp3527V527VgtGgtT11B.1.1200.007692
ORF1ab/nsp3527V527LGtgTtg11B.1.1390.000733
ORF1ab/nsp3527V527VgtGgtT11B.1.1470.000756
ORF1ab/nsp3527V527VgtGgtT11B.1.1570.002985
ORF1ab/nsp3527V527delGTG---11B.1.1600.000031
ORF1ab/nsp3527V527delGTG---11B.1.177.560.000668
ORF1ab/nsp3527V527MGtgAtg11B.1.177.730.000566
ORF1ab/nsp3527V527VgtGgtT11B.1.177.730.000566
ORF1ab/nsp3527V527delGTG---11B.1.177.860.000183
ORF1ab/nsp3527V527VgtGgtT11B.1.177.90.001332
ORF1ab/nsp3527V527LGtgTtg11B.1.1890.004292
ORF1ab/nsp3527V527VgtGgtT11B.1.2100.002132
ORF1ab/nsp3527V527LGtgTtg11B.1.258.170.000104
ORF1ab/nsp3527V527LGtgTtg11B.1.30.002618
ORF1ab/nsp3527V527VgtGgtT11B.1.3110.000275
ORF1ab/nsp3527V527VgtGgtT11B.1.3130.006579
ORF1ab/nsp3527V527LGtgTtg11B.1.3510.00003
ORF1ab/nsp3527V527delGTG---11B.1.360.000146
ORF1ab/nsp3527V527LGtgTtg11B.1.360.000146
ORF1ab/nsp3527V527VgtGgtT11B.1.36.160.001425
ORF1ab/nsp3527V527AgTggCg11B.1.36.170.000494
ORF1ab/nsp3527V527VgtGgtT11B.1.36.170.000494
ORF1ab/nsp3527V527del1gtGgt-11B.1.36.290.000517
ORF1ab/nsp3527V527VgtGgtT11B.1.3610.001289
ORF1ab/nsp3527V527VgtGgtT11B.1.3620.001541
ORF1ab/nsp3527V527LGtgTtg11B.1.3690.000285
ORF1ab/nsp3527V527VgtGgtT11B.1.3750.00082
ORF1ab/nsp3527V527VgtGgtT11B.1.3770.004566
ORF1ab/nsp3527V527VgtGgtT11B.1.3780.006849
ORF1ab/nsp3527V527LGtgTtg11B.1.3820.008929
ORF1ab/nsp3527V527MGtgAtg11B.1.3900.010638
ORF1ab/nsp3527V527VgtGgtT11B.1.3980.002976
ORF1ab/nsp3527V527VgtGgtT11B.1.4110.003704
ORF1ab/nsp3527V527delGTG---11B.1.4150.014286
ORF1ab/nsp3527V527VgtGgtT11B.1.4200.010417
ORF1ab/nsp3527V527VgtGgtT11B.1.4260.001009
ORF1ab/nsp3527V527VgtGgtT11B.1.4620.007246
ORF1ab/nsp3527V527LGtgTtg11B.1.466.20.000391
ORF1ab/nsp3527V527VgtGgtT11B.1.466.20.000391
ORF1ab/nsp3527V527LGtgTtg11B.1.5050.004386
ORF1ab/nsp3527V527LGtgTtg11B.1.5260.000024
ORF1ab/nsp3527V527VgtGgtT11B.1.5440.006024
ORF1ab/nsp3527V527LGtgTtg11B.1.5510.00129
ORF1ab/nsp3527V527VgtGgtT11B.1.5670.003333
ORF1ab/nsp3527V527VgtGgtT11B.1.5760.000907
ORF1ab/nsp3527V527LGtgTtg11B.1.5770.000687
ORF1ab/nsp3527V527AgTggCg11B.1.5950.000261
ORF1ab/nsp3527V527MGtgAtg11B.1.5960.000087
ORF1ab/nsp3527V527VgtGgtT11B.1.5970.00463
ORF1ab/nsp3527V527LGtgTtg11B.1.6020.006536
ORF1ab/nsp3527V527VgtGgtT11B.1.6190.000871
ORF1ab/nsp3527V527VgtGgtT11B.1.6230.000536
ORF1ab/nsp3527V527VgtGgtT11B.1.6300.005236
ORF1ab/nsp3527V527LGtgTtg11B.1.780.008547
ORF1ab/nsp3527V527VgtGgtT11B.1.80.001972
ORF1ab/nsp3527V527VgtGgtT11B.1.840.020833
ORF1ab/nsp3527V527VgtGgtT11B.1.930.000934
ORF1ab/nsp3527V527VgtGgtT11B.280.003279
ORF1ab/nsp3527V527VgtGgtT11B.320.027027
ORF1ab/nsp3527V527delGTG---11B.570.015152
ORF1ab/nsp3527V527VgtGgtT11B.60.00091
ORF1ab/nsp3527V527VgtGgtT11B.6.60.000889
ORF1ab/nsp3527V527delGTG---11B.610.005747
ORF1ab/nsp3527V527VgtGgtT11C.260.007353
ORF1ab/nsp3527V527VgtGgtT11C.300.001727
ORF1ab/nsp3527V527VgtGgtT11C.390.018868
ORF1ab/nsp3527V527VgtGgtT11L.40.05
ORF1ab/nsp3527V527VgtGgtT11M.10.023256
ORF1ab/nsp3527V527VgtGgtT11N.50.001767
ORF1ab/nsp3527V527VgtGgtT11P.1.20.001156
ORF1ab/nsp3527V527VgtGgtT11P.1.40.000977
ORF1ab/nsp3527V527VgtGgtT11P.1.70.000319
ORF1ab/nsp3527V527VgtGgtT11P.30.001595
ORF1ab/nsp3527V527LGtgTtg11P.40.003802
ORF1ab/nsp3527V527delGTG---11U.30.003861