CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF1ab/nsp3 : CodonNum = 51

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF1ab/nsp351N51KN869KnonsynaaTaaA162316120.9932222870-2872
ORF1ab/nsp351N51KN869KnonsynaaTaaG1623110.006777572870-2872
ORF1ab/nsp351N51SN869SnonsynaAtaGt7767720.9948452870-2872
ORF1ab/nsp351N51SN869SnonsynAAtTCt77620.002577322870-2872
ORF1ab/nsp351N51SN869SnonsynAATTCA77620.002577322870-2872
ORF1ab/nsp351N51NN869NsynaaTaaC34334312870-2872
ORF1ab/nsp351N51TN869TnonsynaAtaCt80740.9252870-2872
ORF1ab/nsp351N51TN869TnonsynaATaCA8030.03752870-2872
ORF1ab/nsp351N51TN869TnonsynaATaCG8020.0252870-2872
ORF1ab/nsp351N51TN869TnonsynaATaCC8010.01252870-2872
ORF1ab/nsp351N51DN869DnonsynAatGat585812870-2872
ORF1ab/nsp351N51delN869deldelAAT---505012870-2872
ORF1ab/nsp351N51HN869HnonsynAatCat363612870-2872
ORF1ab/nsp351N51YN869YnonsynAatTat303012870-2872
ORF1ab/nsp351N51IN869InonsynaAtaTt1070.72870-2872
ORF1ab/nsp351N51IN869InonsynaATaTC1030.32870-2872
ORF1ab/nsp351N51AN869AnonsynAATGCG530.62870-2872
ORF1ab/nsp351N51AN869AnonsynAAtGCt520.42870-2872
ORF1ab/nsp351N51del1N869del1delaaTaa-420.52870-2872
ORF1ab/nsp351N51del1N869del1delAat-at420.52870-2872
ORF1ab/nsp351N51EN869EnonsynAaTGaG320.6666672870-2872
ORF1ab/nsp351N51EN869EnonsynAaTGaA310.3333332870-2872
ORF1ab/nsp351N51XN869XnonsynAaTTaA2212870-2872
ORF1ab/nsp351N51RN869RnonsynAAtCGt1112870-2872

Details of the mutation no within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF1ab/nsp351N51KaaTaaA16121623All0.000308
ORF1ab/nsp351N51KaaTaaG111623All0.000002
ORF1ab/nsp351N51KaaTaaA14201420AY.670.659239
ORF1ab/nsp351N51SaAtaGt772776All0.000148
ORF1ab/nsp351N51SAAtTCt2776All0
ORF1ab/nsp351N51SAATTCA2776All0
ORF1ab/nsp351N51SaAtaGt370370B.1.1.4171
ORF1ab/nsp351N51NaaTaaC343343All0.000066
ORF1ab/nsp351N51SaAtaGt219219B.1.1.3480.174363
ORF1ab/nsp351N51TaAtaCt7480All0.000014
ORF1ab/nsp351N51TaATaCA380All0.000001
ORF1ab/nsp351N51TaATaCG280All0
ORF1ab/nsp351N51TaATaCC180All0
ORF1ab/nsp351N51NaaTaaC7272AY.260.002038
ORF1ab/nsp351N51KaaTaaA6768B.1.617.20.000252
ORF1ab/nsp351N51KaaTaaG168B.1.617.20.000004
ORF1ab/nsp351N51NaaTaaC6060B.1.1.70.000054
ORF1ab/nsp351N51DAatGat5858All0.000011
ORF1ab/nsp351N51delAAT---5050All0.00001
ORF1ab/nsp351N51KaaTaaA4545AY.40.00007
ORF1ab/nsp351N51NaaTaaC4141AY.46.40.006745
ORF1ab/nsp351N51HAatCat3636All0.000007
ORF1ab/nsp351N51YAatTat3030All0.000006
ORF1ab/nsp351N51KaaTaaA2526B.1.1.70.000022
ORF1ab/nsp351N51KaaTaaG126B.1.1.70.000001
ORF1ab/nsp351N51NaaTaaC2525AY.40.000039
ORF1ab/nsp351N51NaaTaaC2323AY.1030.000143
ORF1ab/nsp351N51TaAtaCt2323B.1.5260.000541
ORF1ab/nsp351N51SaAtaGt1717P.10.000268
ORF1ab/nsp351N51SaAtaGt1515B.1.1.70.000013
ORF1ab/nsp351N51HAatCat1515B.1.1.70.000013
ORF1ab/nsp351N51SaAtaGt1515B.1.5260.000353
ORF1ab/nsp351N51NaaTaaC1212B.1.617.20.000045
ORF1ab/nsp351N51TaAtaCt1111AY.1200.000409
ORF1ab/nsp351N51SaAtaGt1111AY.260.000311
ORF1ab/nsp351N51IaAtaTt710All0.000001
ORF1ab/nsp351N51IaATaTC310All0.000001
ORF1ab/nsp351N51SaAtaGt1010AY.1190.000353
ORF1ab/nsp351N51SaAtaGt1010AY.40.000016
ORF1ab/nsp351N51YAatTat1010AY.50.000206
ORF1ab/nsp351N51SaAtaGt1010B.1.10.000181
ORF1ab/nsp351N51NaaTaaC99AY.440.000055
ORF1ab/nsp351N51NaaTaaC99AY.540.000858
ORF1ab/nsp351N51DAatGat99B.1.1.70.000008
ORF1ab/nsp351N51SaAtaGt99B.1.617.20.000034
ORF1ab/nsp351N51DAatGat88AY.430.000035
ORF1ab/nsp351N51SaAtaGt88B.10.000073
ORF1ab/nsp351N51SaAtaGt48B.1.1770.000053
ORF1ab/nsp351N51SAATTCA28B.1.1770.000026
ORF1ab/nsp351N51SAAtTCt28B.1.1770.000026
ORF1ab/nsp351N51HAatCat88B.1.617.20.00003
ORF1ab/nsp351N51HAatCat77AY.1030.000043
ORF1ab/nsp351N51delAAT---77B.10.000064
ORF1ab/nsp351N51delAAT---77B.1.1.70.000006
ORF1ab/nsp351N51TaAtaCt77P.10.00011
ORF1ab/nsp351N51KaaTaaA66AY.620.002614
ORF1ab/nsp351N51TaAtaCt46B.1.1770.000053
ORF1ab/nsp351N51TaATaCA26B.1.1770.000026
ORF1ab/nsp351N51NaaTaaC66B.1.5250.000679
ORF1ab/nsp351N51TaAtaCt66B.1.617.20.000023
ORF1ab/nsp351N51DAatGat66P.10.000095
ORF1ab/nsp351N51NaaTaaC66P.10.000095
ORF1ab/nsp351N51AAATGCG35All0.000001
ORF1ab/nsp351N51AAAtGCt25All0
ORF1ab/nsp351N51SaAtaGt55AY.1030.000031
ORF1ab/nsp351N51NaaTaaC55AY.250.00003
ORF1ab/nsp351N51SaAtaGt55AY.250.00003
ORF1ab/nsp351N51KaaTaaA55AY.30.00005
ORF1ab/nsp351N51NaaTaaC55AY.430.000022
ORF1ab/nsp351N51NaaTaaC55B.1.10.000091
ORF1ab/nsp351N51DAatGat55B.1.1.250.002843
ORF1ab/nsp351N51SaAtaGt55B.1.1.500.003394
ORF1ab/nsp351N51SaAtaGt55B.1.2430.000348
ORF1ab/nsp351N51SaAtaGt55B.1.617.10.000645
ORF1ab/nsp351N51DAatGat55B.1.617.20.000019
ORF1ab/nsp351N51AAATGCG240.111111
ORF1ab/nsp351N51AAAtGCt240.111111
ORF1ab/nsp351N51TaAtaCt240.111111
ORF1ab/nsp351N51TaATaCG240.111111
ORF1ab/nsp351N51del1Aat-at24All0
ORF1ab/nsp351N51del1aaTaa-24All0
ORF1ab/nsp351N51delAAT---44AY.250.000024
ORF1ab/nsp351N51SaAtaGt44AY.430.000018
ORF1ab/nsp351N51NaaTaaC44AY.830.006897
ORF1ab/nsp351N51NaaTaaC44B.1.1.330.001684
ORF1ab/nsp351N51NaaTaaC44B.1.1.5190.000159
ORF1ab/nsp351N51YAatTat44B.1.1.70.000004
ORF1ab/nsp351N51TaAtaCt44B.1.1.70.000004
ORF1ab/nsp351N51EAaTGaG23All0
ORF1ab/nsp351N51EAaTGaA13All0
ORF1ab/nsp351N51YAatTat33AY.1000.000138
ORF1ab/nsp351N51KaaTaaA23AY.430.000009
ORF1ab/nsp351N51KaaTaaG13AY.430.000004
ORF1ab/nsp351N51KaaTaaA23AY.610.00021
ORF1ab/nsp351N51KaaTaaG13AY.610.000105
ORF1ab/nsp351N51KaaTaaA33AY.75.10.000541
ORF1ab/nsp351N51NaaTaaC33B.10.000027
ORF1ab/nsp351N51DAatGat33B.10.000027
ORF1ab/nsp351N51delAAT---33B.1.1.330.001263
ORF1ab/nsp351N51NaaTaaC33B.1.1770.00004
ORF1ab/nsp351N51YAatTat33B.1.1770.00004
ORF1ab/nsp351N51NaaTaaC33B.1.20.000026
ORF1ab/nsp351N51SaAtaGt33B.1.20.000026
ORF1ab/nsp351N51KaaTaaG23B.1.20.000018
ORF1ab/nsp351N51KaaTaaA13B.1.20.000009
ORF1ab/nsp351N51KaaTaaA33B.1.3510.000089
ORF1ab/nsp351N51NaaTaaC33B.1.5260.000071
ORF1ab/nsp351N51IaAtaTt220.111111
ORF1ab/nsp351N51EAaTGaG220.111111
ORF1ab/nsp351N51KaaTaaG220.111111
ORF1ab/nsp351N51DAatGat220.111111
ORF1ab/nsp351N51delAAT---220.111111
ORF1ab/nsp351N51XAaTTaA22All0
ORF1ab/nsp351N51SaAtaGt22AY.1020.000053
ORF1ab/nsp351N51KaaTaaA22AY.1020.000053
ORF1ab/nsp351N51KaaTaaA22AY.1030.000012
ORF1ab/nsp351N51KaaTaaA22AY.240.000862
ORF1ab/nsp351N51KaaTaaA22AY.260.000057
ORF1ab/nsp351N51NaaTaaC22AY.370.000632
ORF1ab/nsp351N51HAatCat22AY.40.000003
ORF1ab/nsp351N51DAatGat22AY.40.000003
ORF1ab/nsp351N51YAatTat22AY.40.000003
ORF1ab/nsp351N51KaaTaaG12AY.440.000006
ORF1ab/nsp351N51KaaTaaA12AY.440.000006
ORF1ab/nsp351N51KaaTaaA22AY.520.001629
ORF1ab/nsp351N51SaAtaGt22AY.60.000082
ORF1ab/nsp351N51SaAtaGt22AY.750.000112
ORF1ab/nsp351N51DAatGat22AY.90.000135
ORF1ab/nsp351N51SaAtaGt22AY.90.000135
ORF1ab/nsp351N51KaaTaaA22AY.9.20.000073
ORF1ab/nsp351N51NaaTaaC22AY.98.10.000097
ORF1ab/nsp351N51TaAtaCt22B.10.000018
ORF1ab/nsp351N51delAAT---22B.1.10.000036
ORF1ab/nsp351N51DAatGat22B.1.10.000036
ORF1ab/nsp351N51delAAT---22B.1.1.3480.001592
ORF1ab/nsp351N51TaAtaCt22B.1.1.5190.000079
ORF1ab/nsp351N51IaAtaTt12B.1.1.5190.00004
ORF1ab/nsp351N51IaATaTC12B.1.1.5190.00004
ORF1ab/nsp351N51SaAtaGt22B.1.1.700.000682
ORF1ab/nsp351N51TaAtaCt22B.1.1690.029851
ORF1ab/nsp351N51KaaTaaA22B.1.1770.000026
ORF1ab/nsp351N51XAaTTaA22B.1.1770.000026
ORF1ab/nsp351N51SaAtaGt22B.1.2210.000142
ORF1ab/nsp351N51NaaTaaC22B.1.2210.000142
ORF1ab/nsp351N51KaaTaaA22B.1.2580.000133
ORF1ab/nsp351N51DAatGat22B.1.36.80.002
ORF1ab/nsp351N51delAAT---22B.1.4240.016129
ORF1ab/nsp351N51NaaTaaC22B.1.4290.000047
ORF1ab/nsp351N51delAAT---22B.1.4290.000047
ORF1ab/nsp351N51NaaTaaC22B.1.5960.000174
ORF1ab/nsp351N51SaAtaGt22B.1.6370.000146
ORF1ab/nsp351N51delAAT---22N.60.014184
ORF1ab/nsp351N51delAAT---22P.10.000032
ORF1ab/nsp351N51del1aaTaa-11A.10.000282
ORF1ab/nsp351N51TaAtaCt11A.20.000662
ORF1ab/nsp351N51TaATaCA11A.2.40.003367
ORF1ab/nsp351N51NaaTaaC11A.2.50.000499
ORF1ab/nsp351N51KaaTaaA11A.30.002096
ORF1ab/nsp351N51NaaTaaC11AA.10.007246
ORF1ab/nsp351N51DAatGat11AL.10.012987
ORF1ab/nsp351N51RAAtCGt11All0
ORF1ab/nsp351N51KaaTaaA11AY.100.00053
ORF1ab/nsp351N51SaAtaGt11AY.1000.000046
ORF1ab/nsp351N51NaaTaaC11AY.1020.000027
ORF1ab/nsp351N51KaaTaaA11AY.1060.000335
ORF1ab/nsp351N51delAAT---11AY.1080.001103
ORF1ab/nsp351N51IaAtaTt11AY.1100.000113
ORF1ab/nsp351N51KaaTaaA11AY.1130.000142
ORF1ab/nsp351N51del1aaTaa-11AY.1170.000085
ORF1ab/nsp351N51NaaTaaC11AY.1190.000035
ORF1ab/nsp351N51NaaTaaC11AY.1200.000037
ORF1ab/nsp351N51SaAtaGt11AY.190.00114
ORF1ab/nsp351N51SaAtaGt11AY.20.000356
ORF1ab/nsp351N51KaaTaaG11AY.200.000039
ORF1ab/nsp351N51HAatCat11AY.200.000039
ORF1ab/nsp351N51SaAtaGt11AY.200.000039
ORF1ab/nsp351N51NaaTaaC11AY.230.00007
ORF1ab/nsp351N51YAatTat11AY.250.000006
ORF1ab/nsp351N51IaATaTC11AY.250.000006
ORF1ab/nsp351N51SaAtaGt11AY.270.000065
ORF1ab/nsp351N51NaaTaaC11AY.270.000065
ORF1ab/nsp351N51SaAtaGt11AY.290.000016
ORF1ab/nsp351N51SaAtaGt11AY.30.00001
ORF1ab/nsp351N51NaaTaaC11AY.30.00001
ORF1ab/nsp351N51delAAT---11AY.30.00001
ORF1ab/nsp351N51KaaTaaA11AY.300.000396
ORF1ab/nsp351N51NaaTaaC11AY.330.000067
ORF1ab/nsp351N51SaAtaGt11AY.34.10.00051
ORF1ab/nsp351N51TaAtaCt11AY.360.000148
ORF1ab/nsp351N51KaaTaaA11AY.390.000025
ORF1ab/nsp351N51HAatCat11AY.390.000025
ORF1ab/nsp351N51NaaTaaC11AY.390.000025
ORF1ab/nsp351N51HAatCat11AY.39.1.10.000725
ORF1ab/nsp351N51SaAtaGt11AY.39.20.001541
ORF1ab/nsp351N51TaAtaCt11AY.40.000002
ORF1ab/nsp351N51HAatCat11AY.4.20.000022
ORF1ab/nsp351N51SaAtaGt11AY.420.00004
ORF1ab/nsp351N51delAAT---11AY.430.000004
ORF1ab/nsp351N51SaAtaGt11AY.440.000006
ORF1ab/nsp351N51IaAtaTt11AY.440.000006
ORF1ab/nsp351N51DAatGat11AY.440.000006
ORF1ab/nsp351N51KaaTaaG11AY.460.000104
ORF1ab/nsp351N51NaaTaaC11AY.460.000104
ORF1ab/nsp351N51KaaTaaA11AY.470.000031
ORF1ab/nsp351N51NaaTaaC11AY.470.000031
ORF1ab/nsp351N51NaaTaaC11AY.50.000021
ORF1ab/nsp351N51KaaTaaA11AY.50.000021
ORF1ab/nsp351N51SaAtaGt11AY.510.000909
ORF1ab/nsp351N51DAatGat11AY.610.000105
ORF1ab/nsp351N51KaaTaaA11AY.650.000533
ORF1ab/nsp351N51RAAtCGt11AY.670.000464
ORF1ab/nsp351N51delAAT---11AY.7.20.000559
ORF1ab/nsp351N51KaaTaaA11AY.750.000056
ORF1ab/nsp351N51NaaTaaC11AY.75.10.00018
ORF1ab/nsp351N51YAatTat11AY.850.000427
ORF1ab/nsp351N51SaAtaGt11AY.870.000833
ORF1ab/nsp351N51TaAtaCt11AY.9.10.000084
ORF1ab/nsp351N51delAAT---11AY.9.20.000037
ORF1ab/nsp351N51KaaTaaA11AY.930.000273
ORF1ab/nsp351N51NaaTaaC11AY.980.000079
ORF1ab/nsp351N51SaAtaGt11AY.980.000079
ORF1ab/nsp351N51DAatGat11AY.99.20.000092
ORF1ab/nsp351N51DAatGat11AZ.20.000821
ORF1ab/nsp351N51TaAtaCt11B0.000128
ORF1ab/nsp351N51YAatTat11B.10.000009
ORF1ab/nsp351N51KaaTaaA11B.10.000009
ORF1ab/nsp351N51TaAtaCt11B.1.1.1280.007092
ORF1ab/nsp351N51SaAtaGt11B.1.1.1570.000913
ORF1ab/nsp351N51NaaTaaC11B.1.1.1580.012195
ORF1ab/nsp351N51SaAtaGt11B.1.1.1740.003378
ORF1ab/nsp351N51NaaTaaC11B.1.1.280.000311
ORF1ab/nsp351N51DAatGat11B.1.1.280.000311
ORF1ab/nsp351N51TaAtaCt11B.1.1.2910.000742
ORF1ab/nsp351N51NaaTaaC11B.1.1.3160.000925
ORF1ab/nsp351N51KaaTaaA11B.1.1.3700.012658
ORF1ab/nsp351N51delAAT---11B.1.1.4160.000905
ORF1ab/nsp351N51SaAtaGt11B.1.1.4160.000905
ORF1ab/nsp351N51YAatTat11B.1.1.5190.00004
ORF1ab/nsp351N51EAaTGaA11B.1.1.70.000001
ORF1ab/nsp351N51TaAtaCt11B.1.1.80.003584
ORF1ab/nsp351N51DAatGat11B.1.1770.000013
ORF1ab/nsp351N51delAAT---11B.1.177.510.004566
ORF1ab/nsp351N51DAatGat11B.1.177.860.000183
ORF1ab/nsp351N51SaAtaGt11B.1.177.860.000183
ORF1ab/nsp351N51TaAtaCt11B.1.20.000009
ORF1ab/nsp351N51del1Aat-at11B.1.20.000009
ORF1ab/nsp351N51DAatGat11B.1.20.000009
ORF1ab/nsp351N51NaaTaaC11B.1.2580.000067
ORF1ab/nsp351N51NaaTaaC11B.1.3110.000275
ORF1ab/nsp351N51KaaTaaA11B.1.3110.000275
ORF1ab/nsp351N51SaAtaGt11B.1.3490.000715
ORF1ab/nsp351N51NaaTaaC11B.1.3510.00003
ORF1ab/nsp351N51delAAT---11B.1.3510.00003
ORF1ab/nsp351N51YAatTat11B.1.360.000146
ORF1ab/nsp351N51SaAtaGt11B.1.360.000146
ORF1ab/nsp351N51DAatGat11B.1.36.290.000517
ORF1ab/nsp351N51KaaTaaA11B.1.36.290.000517
ORF1ab/nsp351N51TaAtaCt11B.1.3690.000285
ORF1ab/nsp351N51TaATaCC11B.1.3750.00082
ORF1ab/nsp351N51DAatGat11B.1.3950.007042
ORF1ab/nsp351N51DAatGat11B.1.4040.001302
ORF1ab/nsp351N51YAatTat11B.1.4210.007463
ORF1ab/nsp351N51NaaTaaC11B.1.4270.00005
ORF1ab/nsp351N51IaATaTC11B.1.4290.000024
ORF1ab/nsp351N51SaAtaGt11B.1.4290.000024
ORF1ab/nsp351N51SaAtaGt11B.1.4560.003268
ORF1ab/nsp351N51delAAT---11B.1.5610.000397
ORF1ab/nsp351N51NaaTaaC11B.1.5770.000687
ORF1ab/nsp351N51NaaTaaC11B.1.5820.000491
ORF1ab/nsp351N51YAatTat11B.1.6060.006024
ORF1ab/nsp351N51del1Aat-at11B.1.617.20.000004
ORF1ab/nsp351N51IaAtaTt11B.1.617.20.000004
ORF1ab/nsp351N51delAAT---11B.1.617.20.000004
ORF1ab/nsp351N51YAatTat11B.1.617.20.000004
ORF1ab/nsp351N51AAATGCG11B.1.617.30.002985
ORF1ab/nsp351N51IaAtaTt11B.1.6210.000089
ORF1ab/nsp351N51SaAtaGt11B.1.621.10.000506
ORF1ab/nsp351N51NaaTaaC11B.1.6230.000536
ORF1ab/nsp351N51NaaTaaC11B.1.6280.000352
ORF1ab/nsp351N51NaaTaaC11B.1.90.006173
ORF1ab/nsp351N51NaaTaaC11B.1.930.000934
ORF1ab/nsp351N51SaAtaGt11B.110.005128
ORF1ab/nsp351N51SaAtaGt11B.390.002331
ORF1ab/nsp351N51delAAT---11B.570.015152
ORF1ab/nsp351N51delAAT---11C.170.055556
ORF1ab/nsp351N51delAAT---11C.360.000911
ORF1ab/nsp351N51SaAtaGt11C.36.10.004149
ORF1ab/nsp351N51NaaTaaC11D.20.000075
ORF1ab/nsp351N51TaAtaCt11N.50.001767
ORF1ab/nsp351N51delAAT---11P.1.10.000318
ORF1ab/nsp351N51SaAtaGt11P.1.10.000318
ORF1ab/nsp351N51KaaTaaA11P.1.140.000048
ORF1ab/nsp351N51SaAtaGt11P.1.140.000048
ORF1ab/nsp351N51NaaTaaC11Q.10.000126
ORF1ab/nsp351N51delAAT---11Q.20.000613
ORF1ab/nsp351N51NaaTaaC11Q.40.000455