CoV-GLUE | Mutations | Mutation
Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):
ORF | CodonNum | Mut | ORF1abMut | MutType | RefCodon | MutCodon | AACount | CodonCount | CodonProp | Genome Position |
ORF1ab/nsp3 | 501 | K501E | K1319E | nonsyn | Aaa | Gaa | 530 | 530 | 1 | 4220-4222 |
ORF1ab/nsp3 | 501 | K501R | K1319R | nonsyn | aAa | aGa | 102 | 95 | 0.931373 | 4220-4222 |
ORF1ab/nsp3 | 501 | K501R | K1319R | nonsyn | AAA | CGT | 102 | 2 | 0.0196078 | 4220-4222 |
ORF1ab/nsp3 | 501 | K501R | K1319R | nonsyn | AAA | CGG | 102 | 2 | 0.0196078 | 4220-4222 |
ORF1ab/nsp3 | 501 | K501R | K1319R | nonsyn | AAa | CGa | 102 | 2 | 0.0196078 | 4220-4222 |
ORF1ab/nsp3 | 501 | K501R | K1319R | nonsyn | aAA | aGG | 102 | 1 | 0.00980392 | 4220-4222 |
ORF1ab/nsp3 | 501 | K501K | K1319K | syn | aaA | aaG | 83 | 83 | 1 | 4220-4222 |
ORF1ab/nsp3 | 501 | K501N | K1319N | nonsyn | aaA | aaC | 62 | 53 | 0.854839 | 4220-4222 |
ORF1ab/nsp3 | 501 | K501N | K1319N | nonsyn | aaA | aaT | 62 | 9 | 0.145161 | 4220-4222 |
ORF1ab/nsp3 | 501 | K501T | K1319T | nonsyn | aAa | aCa | 39 | 39 | 1 | 4220-4222 |
ORF1ab/nsp3 | 501 | K501del | K1319del | del | AAA | --- | 21 | 21 | 1 | 4220-4222 |
ORF1ab/nsp3 | 501 | K501I | K1319I | nonsyn | aAa | aTa | 13 | 13 | 1 | 4220-4222 |
ORF1ab/nsp3 | 501 | K501Q | K1319Q | nonsyn | Aaa | Caa | 13 | 13 | 1 | 4220-4222 |
ORF1ab/nsp3 | 501 | K501X | K1319X | nonsyn | Aaa | Taa | 4 | 4 | 1 | 4220-4222 |
ORF1ab/nsp3 | 501 | K501V | K1319V | nonsyn | AAa | GTa | 2 | 2 | 1 | 4220-4222 |
ORF1ab/nsp3 | 501 | K501S | K1319S | nonsyn | aAA | aGT | 2 | 2 | 1 | 4220-4222 |
ORF1ab/nsp3 | 501 | K501del2 | K1319del2 | del | AAa | --a | 1 | 1 | 1 | 4220-4222 |
ORF1ab/nsp3 | 501 | K501del1 | K1319del1 | del | AaA | -aT | 1 | 1 | 1 | 4220-4222 |
Details of the mutation no within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):
ORF | CodonNum | Mut | RefCodon | MutCodon | CodonCount | AACount | Lineage | LineageCodonProp |
ORF1ab/nsp3 | 501 | K501E | Aaa | Gaa | 530 | 530 | All | 0.000101 |
ORF1ab/nsp3 | 501 | K501E | Aaa | Gaa | 407 | 407 | B.1.625 | 0.957647 |
ORF1ab/nsp3 | 501 | K501R | aAa | aGa | 95 | 102 | All | 0.000018 |
ORF1ab/nsp3 | 501 | K501R | AAA | CGG | 2 | 102 | All | 0 |
ORF1ab/nsp3 | 501 | K501R | AAa | CGa | 2 | 102 | All | 0 |
ORF1ab/nsp3 | 501 | K501R | AAA | CGT | 2 | 102 | All | 0 |
ORF1ab/nsp3 | 501 | K501R | aAA | aGG | 1 | 102 | All | 0 |
ORF1ab/nsp3 | 501 | K501K | aaA | aaG | 83 | 83 | All | 0.000016 |
ORF1ab/nsp3 | 501 | K501N | aaA | aaC | 53 | 62 | All | 0.00001 |
ORF1ab/nsp3 | 501 | K501N | aaA | aaT | 9 | 62 | All | 0.000002 |
ORF1ab/nsp3 | 501 | K501T | aAa | aCa | 39 | 39 | All | 0.000007 |
ORF1ab/nsp3 | 501 | K501R | aAa | aGa | 39 | 39 | B.1.429 | 0.000918 |
ORF1ab/nsp3 | 501 | K501E | Aaa | Gaa | 34 | 34 | B.1 | 0.000311 |
ORF1ab/nsp3 | 501 | K501N | aaA | aaC | 29 | 29 | B.1.1.7 | 0.000026 |
ORF1ab/nsp3 | 501 | K501T | aAa | aCa | 26 | 26 | B.1.234 | 0.003431 |
ORF1ab/nsp3 | 501 | K501K | aaA | aaG | 25 | 25 | B.1.1.7 | 0.000022 |
ORF1ab/nsp3 | 501 | K501del | AAA | --- | 21 | 21 | All | 0.000004 |
ORF1ab/nsp3 | 501 | K501E | Aaa | Gaa | 21 | 21 | AY.25 | 0.000126 |
ORF1ab/nsp3 | 501 | K501K | aaA | aaG | 21 | 21 | B.1.416.1 | 0.032813 |
ORF1ab/nsp3 | 501 | K501I | aAa | aTa | 13 | 13 | All | 0.000002 |
ORF1ab/nsp3 | 501 | K501Q | Aaa | Caa | 13 | 13 | All | 0.000002 |
ORF1ab/nsp3 | 501 | K501R | aAa | aGa | 9 | 9 | AY.43 | 0.00004 |
ORF1ab/nsp3 | 501 | K501R | aAa | aGa | 7 | 7 | AY.4 | 0.000011 |
ORF1ab/nsp3 | 501 | K501R | aAa | aGa | 7 | 7 | B.1.1.7 | 0.000006 |
ORF1ab/nsp3 | 501 | K501T | aAa | aCa | 7 | 7 | B.1.1.7 | 0.000006 |
ORF1ab/nsp3 | 501 | K501R | AAa | CGa | 2 | 6 | 0.111111 | |
ORF1ab/nsp3 | 501 | K501R | AAA | CGG | 2 | 6 | 0.111111 | |
ORF1ab/nsp3 | 501 | K501R | AAA | CGT | 2 | 6 | 0.111111 | |
ORF1ab/nsp3 | 501 | K501E | Aaa | Gaa | 6 | 6 | B.1.1.7 | 0.000005 |
ORF1ab/nsp3 | 501 | K501E | Aaa | Gaa | 6 | 6 | B.1.128 | 0.003812 |
ORF1ab/nsp3 | 501 | K501N | aaA | aaC | 5 | 5 | AY.4 | 0.000008 |
ORF1ab/nsp3 | 501 | K501N | aaA | aaC | 4 | 5 | B.1 | 0.000037 |
ORF1ab/nsp3 | 501 | K501N | aaA | aaT | 1 | 5 | B.1 | 0.000009 |
ORF1ab/nsp3 | 501 | K501N | aaA | aaC | 5 | 5 | B.1.177.86 | 0.000917 |
ORF1ab/nsp3 | 501 | K501K | aaA | aaG | 5 | 5 | B.1.617.2 | 0.000019 |
ORF1ab/nsp3 | 501 | K501E | Aaa | Gaa | 5 | 5 | P.1 | 0.000079 |
ORF1ab/nsp3 | 501 | K501X | Aaa | Taa | 4 | 4 | All | 0.000001 |
ORF1ab/nsp3 | 501 | K501R | aAa | aGa | 4 | 4 | AY.103 | 0.000025 |
ORF1ab/nsp3 | 501 | K501K | aaA | aaG | 4 | 4 | AY.25 | 0.000024 |
ORF1ab/nsp3 | 501 | K501K | aaA | aaG | 4 | 4 | AY.4 | 0.000006 |
ORF1ab/nsp3 | 501 | K501E | Aaa | Gaa | 4 | 4 | B.1.177 | 0.000053 |
ORF1ab/nsp3 | 501 | K501K | aaA | aaG | 4 | 4 | B.1.2 | 0.000035 |
ORF1ab/nsp3 | 501 | K501R | aAa | aGa | 4 | 4 | B.1.320 | 0.004981 |
ORF1ab/nsp3 | 501 | K501E | Aaa | Gaa | 4 | 4 | B.1.617.2 | 0.000015 |
ORF1ab/nsp3 | 501 | K501Q | Aaa | Caa | 3 | 3 | AY.25 | 0.000018 |
ORF1ab/nsp3 | 501 | K501del | AAA | --- | 3 | 3 | AY.43 | 0.000013 |
ORF1ab/nsp3 | 501 | K501K | aaA | aaG | 3 | 3 | AY.81 | 0.005976 |
ORF1ab/nsp3 | 501 | K501K | aaA | aaG | 3 | 3 | B.1 | 0.000027 |
ORF1ab/nsp3 | 501 | K501del | AAA | --- | 3 | 3 | B.1.1.7 | 0.000003 |
ORF1ab/nsp3 | 501 | K501Q | Aaa | Caa | 3 | 3 | B.1.2 | 0.000026 |
ORF1ab/nsp3 | 501 | K501I | aAa | aTa | 3 | 3 | B.1.2 | 0.000026 |
ORF1ab/nsp3 | 501 | K501E | Aaa | Gaa | 3 | 3 | B.1.36.35 | 0.007812 |
ORF1ab/nsp3 | 501 | K501E | Aaa | Gaa | 3 | 3 | B.1.36.8 | 0.003 |
ORF1ab/nsp3 | 501 | K501E | Aaa | Gaa | 3 | 3 | B.1.595 | 0.000783 |
ORF1ab/nsp3 | 501 | K501R | aAa | aGa | 3 | 3 | B.1.617.2 | 0.000011 |
ORF1ab/nsp3 | 501 | K501E | Aaa | Gaa | 2 | 2 | 0.111111 | |
ORF1ab/nsp3 | 501 | K501S | aAA | aGT | 2 | 2 | 0.111111 | |
ORF1ab/nsp3 | 501 | K501del | AAA | --- | 2 | 2 | 0.111111 | |
ORF1ab/nsp3 | 501 | K501V | AAa | GTa | 2 | 2 | All | 0 |
ORF1ab/nsp3 | 501 | K501S | aAA | aGT | 2 | 2 | All | 0 |
ORF1ab/nsp3 | 501 | K501N | aaA | aaC | 2 | 2 | AY.102 | 0.000053 |
ORF1ab/nsp3 | 501 | K501E | Aaa | Gaa | 2 | 2 | AY.103 | 0.000012 |
ORF1ab/nsp3 | 501 | K501E | Aaa | Gaa | 2 | 2 | AY.43 | 0.000009 |
ORF1ab/nsp3 | 501 | K501I | aAa | aTa | 2 | 2 | AY.43 | 0.000009 |
ORF1ab/nsp3 | 501 | K501E | Aaa | Gaa | 2 | 2 | B | 0.000256 |
ORF1ab/nsp3 | 501 | K501R | aAa | aGa | 2 | 2 | B.1 | 0.000018 |
ORF1ab/nsp3 | 501 | K501I | aAa | aTa | 2 | 2 | B.1.1 | 0.000036 |
ORF1ab/nsp3 | 501 | K501R | aAa | aGa | 2 | 2 | B.1.1 | 0.000036 |
ORF1ab/nsp3 | 501 | K501E | Aaa | Gaa | 2 | 2 | B.1.1.28 | 0.000622 |
ORF1ab/nsp3 | 501 | K501N | aaA | aaC | 1 | 2 | B.1.177 | 0.000013 |
ORF1ab/nsp3 | 501 | K501N | aaA | aaT | 1 | 2 | B.1.177 | 0.000013 |
ORF1ab/nsp3 | 501 | K501Q | Aaa | Caa | 2 | 2 | B.1.575 | 0.000607 |
ORF1ab/nsp3 | 501 | K501R | aAa | aGa | 2 | 2 | B.1.576 | 0.001813 |
ORF1ab/nsp3 | 501 | K501E | Aaa | Gaa | 2 | 2 | D.2 | 0.00015 |
ORF1ab/nsp3 | 501 | K501del2 | AAa | --a | 1 | 1 | All | 0 |
ORF1ab/nsp3 | 501 | K501del1 | AaA | -aT | 1 | 1 | All | 0 |
ORF1ab/nsp3 | 501 | K501R | aAa | aGa | 1 | 1 | AY.100 | 0.000046 |
ORF1ab/nsp3 | 501 | K501N | aaA | aaC | 1 | 1 | AY.100 | 0.000046 |
ORF1ab/nsp3 | 501 | K501Q | Aaa | Caa | 1 | 1 | AY.103 | 0.000006 |
ORF1ab/nsp3 | 501 | K501N | aaA | aaT | 1 | 1 | AY.103 | 0.000006 |
ORF1ab/nsp3 | 501 | K501N | aaA | aaC | 1 | 1 | AY.117 | 0.000085 |
ORF1ab/nsp3 | 501 | K501E | Aaa | Gaa | 1 | 1 | AY.120 | 0.000037 |
ORF1ab/nsp3 | 501 | K501del | AAA | --- | 1 | 1 | AY.25 | 0.000006 |
ORF1ab/nsp3 | 501 | K501N | aaA | aaC | 1 | 1 | AY.26 | 0.000028 |
ORF1ab/nsp3 | 501 | K501R | aAa | aGa | 1 | 1 | AY.27 | 0.000065 |
ORF1ab/nsp3 | 501 | K501Q | Aaa | Caa | 1 | 1 | AY.29 | 0.000016 |
ORF1ab/nsp3 | 501 | K501N | aaA | aaC | 1 | 1 | AY.29 | 0.000016 |
ORF1ab/nsp3 | 501 | K501T | aAa | aCa | 1 | 1 | AY.29 | 0.000016 |
ORF1ab/nsp3 | 501 | K501N | aaA | aaT | 1 | 1 | AY.3 | 0.00001 |
ORF1ab/nsp3 | 501 | K501T | aAa | aCa | 1 | 1 | AY.35 | 0.000233 |
ORF1ab/nsp3 | 501 | K501E | Aaa | Gaa | 1 | 1 | AY.39 | 0.000025 |
ORF1ab/nsp3 | 501 | K501N | aaA | aaT | 1 | 1 | AY.39 | 0.000025 |
ORF1ab/nsp3 | 501 | K501E | Aaa | Gaa | 1 | 1 | AY.4 | 0.000002 |
ORF1ab/nsp3 | 501 | K501N | aaA | aaC | 1 | 1 | AY.4.3 | 0.000842 |
ORF1ab/nsp3 | 501 | K501del | AAA | --- | 1 | 1 | AY.4.5 | 0.000107 |
ORF1ab/nsp3 | 501 | K501N | aaA | aaC | 1 | 1 | AY.43 | 0.000004 |
ORF1ab/nsp3 | 501 | K501Q | Aaa | Caa | 1 | 1 | AY.43 | 0.000004 |
ORF1ab/nsp3 | 501 | K501del2 | AAa | --a | 1 | 1 | AY.43 | 0.000004 |
ORF1ab/nsp3 | 501 | K501K | aaA | aaG | 1 | 1 | AY.44 | 0.000006 |
ORF1ab/nsp3 | 501 | K501E | Aaa | Gaa | 1 | 1 | AY.44 | 0.000006 |
ORF1ab/nsp3 | 501 | K501R | aAA | aGG | 1 | 1 | AY.44 | 0.000006 |
ORF1ab/nsp3 | 501 | K501E | Aaa | Gaa | 1 | 1 | AY.45 | 0.000122 |
ORF1ab/nsp3 | 501 | K501N | aaA | aaT | 1 | 1 | AY.46 | 0.000104 |
ORF1ab/nsp3 | 501 | K501R | aAa | aGa | 1 | 1 | AY.46.2 | 0.000635 |
ORF1ab/nsp3 | 501 | K501R | aAa | aGa | 1 | 1 | AY.47 | 0.000031 |
ORF1ab/nsp3 | 501 | K501E | Aaa | Gaa | 1 | 1 | AY.5.3 | 0.000337 |
ORF1ab/nsp3 | 501 | K501E | Aaa | Gaa | 1 | 1 | AY.53 | 0.000288 |
ORF1ab/nsp3 | 501 | K501E | Aaa | Gaa | 1 | 1 | AY.54 | 0.000095 |
ORF1ab/nsp3 | 501 | K501del | AAA | --- | 1 | 1 | AY.81 | 0.001992 |
ORF1ab/nsp3 | 501 | K501N | aaA | aaT | 1 | 1 | AY.98 | 0.000079 |
ORF1ab/nsp3 | 501 | K501del | AAA | --- | 1 | 1 | AY.99 | 0.001049 |
ORF1ab/nsp3 | 501 | K501N | aaA | aaC | 1 | 1 | B | 0.000128 |
ORF1ab/nsp3 | 501 | K501X | Aaa | Taa | 1 | 1 | B.1 | 0.000009 |
ORF1ab/nsp3 | 501 | K501del | AAA | --- | 1 | 1 | B.1 | 0.000009 |
ORF1ab/nsp3 | 501 | K501X | Aaa | Taa | 1 | 1 | B.1.1 | 0.000018 |
ORF1ab/nsp3 | 501 | K501E | Aaa | Gaa | 1 | 1 | B.1.1 | 0.000018 |
ORF1ab/nsp3 | 501 | K501V | AAa | GTa | 1 | 1 | B.1.1.1 | 0.000327 |
ORF1ab/nsp3 | 501 | K501E | Aaa | Gaa | 1 | 1 | B.1.1.1 | 0.000327 |
ORF1ab/nsp3 | 501 | K501I | aAa | aTa | 1 | 1 | B.1.1.1 | 0.000327 |
ORF1ab/nsp3 | 501 | K501E | Aaa | Gaa | 1 | 1 | B.1.1.141 | 0.002012 |
ORF1ab/nsp3 | 501 | K501X | Aaa | Taa | 1 | 1 | B.1.1.153 | 0.001095 |
ORF1ab/nsp3 | 501 | K501del | AAA | --- | 1 | 1 | B.1.1.216 | 0.00089 |
ORF1ab/nsp3 | 501 | K501T | aAa | aCa | 1 | 1 | B.1.1.216 | 0.00089 |
ORF1ab/nsp3 | 501 | K501V | AAa | GTa | 1 | 1 | B.1.1.26 | 0.005236 |
ORF1ab/nsp3 | 501 | K501K | aaA | aaG | 1 | 1 | B.1.1.291 | 0.000742 |
ORF1ab/nsp3 | 501 | K501E | Aaa | Gaa | 1 | 1 | B.1.1.294 | 0.001266 |
ORF1ab/nsp3 | 501 | K501R | aAa | aGa | 1 | 1 | B.1.1.317 | 0.000412 |
ORF1ab/nsp3 | 501 | K501K | aaA | aaG | 1 | 1 | B.1.1.329 | 0.003846 |
ORF1ab/nsp3 | 501 | K501K | aaA | aaG | 1 | 1 | B.1.1.519 | 0.00004 |
ORF1ab/nsp3 | 501 | K501del | AAA | --- | 1 | 1 | B.1.1.519 | 0.00004 |
ORF1ab/nsp3 | 501 | K501X | Aaa | Taa | 1 | 1 | B.1.1.7 | 0.000001 |
ORF1ab/nsp3 | 501 | K501del1 | AaA | -aT | 1 | 1 | B.1.1.7 | 0.000001 |
ORF1ab/nsp3 | 501 | K501I | aAa | aTa | 1 | 1 | B.1.1.7 | 0.000001 |
ORF1ab/nsp3 | 501 | K501E | Aaa | Gaa | 1 | 1 | B.1.1.98 | 0.018519 |
ORF1ab/nsp3 | 501 | K501E | Aaa | Gaa | 1 | 1 | B.1.157 | 0.002985 |
ORF1ab/nsp3 | 501 | K501E | Aaa | Gaa | 1 | 1 | B.1.160 | 0.000031 |
ORF1ab/nsp3 | 501 | K501R | aAa | aGa | 1 | 1 | B.1.160 | 0.000031 |
ORF1ab/nsp3 | 501 | K501K | aaA | aaG | 1 | 1 | B.1.177.57 | 0.000281 |
ORF1ab/nsp3 | 501 | K501E | Aaa | Gaa | 1 | 1 | B.1.177.8 | 0.000752 |
ORF1ab/nsp3 | 501 | K501del | AAA | --- | 1 | 1 | B.1.177.86 | 0.000183 |
ORF1ab/nsp3 | 501 | K501K | aaA | aaG | 1 | 1 | B.1.177.86 | 0.000183 |
ORF1ab/nsp3 | 501 | K501E | Aaa | Gaa | 1 | 1 | B.1.214.2 | 0.0006 |
ORF1ab/nsp3 | 501 | K501Q | Aaa | Caa | 1 | 1 | B.1.221 | 0.000071 |
ORF1ab/nsp3 | 501 | K501N | aaA | aaT | 1 | 1 | B.1.234 | 0.000132 |
ORF1ab/nsp3 | 501 | K501I | aAa | aTa | 1 | 1 | B.1.234 | 0.000132 |
ORF1ab/nsp3 | 501 | K501T | aAa | aCa | 1 | 1 | B.1.240 | 0.000216 |
ORF1ab/nsp3 | 501 | K501I | aAa | aTa | 1 | 1 | B.1.243 | 0.00007 |
ORF1ab/nsp3 | 501 | K501E | Aaa | Gaa | 1 | 1 | B.1.243 | 0.00007 |
ORF1ab/nsp3 | 501 | K501R | aAa | aGa | 1 | 1 | B.1.243 | 0.00007 |
ORF1ab/nsp3 | 501 | K501Q | Aaa | Caa | 1 | 1 | B.1.258 | 0.000067 |
ORF1ab/nsp3 | 501 | K501R | aAa | aGa | 1 | 1 | B.1.258.7 | 0.001912 |
ORF1ab/nsp3 | 501 | K501R | aAa | aGa | 1 | 1 | B.1.311 | 0.000275 |
ORF1ab/nsp3 | 501 | K501N | aaA | aaT | 1 | 1 | B.1.351 | 0.00003 |
ORF1ab/nsp3 | 501 | K501del | AAA | --- | 1 | 1 | B.1.36 | 0.000146 |
ORF1ab/nsp3 | 501 | K501T | aAa | aCa | 1 | 1 | B.1.36 | 0.000146 |
ORF1ab/nsp3 | 501 | K501K | aaA | aaG | 1 | 1 | B.1.377 | 0.004566 |
ORF1ab/nsp3 | 501 | K501E | Aaa | Gaa | 1 | 1 | B.1.396 | 0.000706 |
ORF1ab/nsp3 | 501 | K501E | Aaa | Gaa | 1 | 1 | B.1.409 | 0.000781 |
ORF1ab/nsp3 | 501 | K501E | Aaa | Gaa | 1 | 1 | B.1.429 | 0.000024 |
ORF1ab/nsp3 | 501 | K501K | aaA | aaG | 1 | 1 | B.1.443 | 0.004673 |
ORF1ab/nsp3 | 501 | K501R | aAa | aGa | 1 | 1 | B.1.446 | 0.02 |
ORF1ab/nsp3 | 501 | K501I | aAa | aTa | 1 | 1 | B.1.446 | 0.02 |
ORF1ab/nsp3 | 501 | K501E | Aaa | Gaa | 1 | 1 | B.1.474 | 0.001901 |
ORF1ab/nsp3 | 501 | K501R | aAa | aGa | 1 | 1 | B.1.567 | 0.003333 |
ORF1ab/nsp3 | 501 | K501T | aAa | aCa | 1 | 1 | B.1.617.2 | 0.000004 |
ORF1ab/nsp3 | 501 | K501R | aAa | aGa | 1 | 1 | B.1.621 | 0.000089 |
ORF1ab/nsp3 | 501 | K501K | aaA | aaG | 1 | 1 | B.1.621 | 0.000089 |
ORF1ab/nsp3 | 501 | K501K | aaA | aaG | 1 | 1 | B.42 | 0.033333 |
ORF1ab/nsp3 | 501 | K501del | AAA | --- | 1 | 1 | B.57 | 0.015152 |
ORF1ab/nsp3 | 501 | K501K | aaA | aaG | 1 | 1 | D.2 | 0.000075 |
ORF1ab/nsp3 | 501 | K501R | aAa | aGa | 1 | 1 | D.2 | 0.000075 |
ORF1ab/nsp3 | 501 | K501R | aAa | aGa | 1 | 1 | P.1 | 0.000016 |
ORF1ab/nsp3 | 501 | K501del | AAA | --- | 1 | 1 | P.1 | 0.000016 |
ORF1ab/nsp3 | 501 | K501K | aaA | aaG | 1 | 1 | P.1.17 | 0.000162 |
ORF1ab/nsp3 | 501 | K501I | aAa | aTa | 1 | 1 | P.1.17 | 0.000162 |
ORF1ab/nsp3 | 501 | K501K | aaA | aaG | 1 | 1 | Q.3 | 0.000145 |
ORF1ab/nsp3 | 501 | K501R | aAa | aGa | 1 | 1 | Q.3 | 0.000145 |
ORF1ab/nsp3 | 501 | K501K | aaA | aaG | 1 | 1 | R.1 | 0.00009 |
ORF1ab/nsp3 | 501 | K501R | aAa | aGa | 1 | 1 | R.1 | 0.00009 |
ORF1ab/nsp3 | 501 | K501del | AAA | --- | 1 | 1 | R.1 | 0.00009 |
ORF1ab/nsp3 | 501 | K501del | AAA | --- | 1 | 1 | U.3 | 0.003861 |
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CoV-GLUE is still in development. CoV-GLUE was originally developed as part of COG-UK by Josh Singer using the GLUE framework at the MRC-University of Glasgow Centre for Virus Research (CVR). In 2021 it was redeveloped by Richard Orton to scale to the millions of genome sequences available. We acknowledge support from the MRC (MC_UU_12014/12), WT (220977/Z/20/Z) and UKRI G2P (MR/W005611/1). Please contact Richard Orton with any queries: Richard.Orton@glasgow.ac.uk
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