CoV-GLUEGenomeCountriesLineagesMutationsInsertionsDeletionsUpdated:

CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF1ab/nsp3 : CodonNum = 50

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF1ab/nsp350V50LV868LnonsynGtaTta238623800.9974852867-2869
ORF1ab/nsp350V50LV868LnonsynGtaCta238640.001676452867-2869
ORF1ab/nsp350V50LV868LnonsynGtATtG238610.0004191112867-2869
ORF1ab/nsp350V50LV868LnonsynGtACtG238610.0004191112867-2869
ORF1ab/nsp350V50VV868VsyngtAgtG174416940.971332867-2869
ORF1ab/nsp350V50VV868VsyngtAgtT1744460.02637612867-2869
ORF1ab/nsp350V50VV868VsyngtAgtC174440.002293582867-2869
ORF1ab/nsp350V50IV868InonsynGtaAta2342300.9829062867-2869
ORF1ab/nsp350V50IV868InonsynGtAAtC23420.008547012867-2869
ORF1ab/nsp350V50IV868InonsynGtAAtT23420.008547012867-2869
ORF1ab/nsp350V50AV868AnonsyngTagCa16016012867-2869
ORF1ab/nsp350V50delV868deldelGTA---11811812867-2869
ORF1ab/nsp350V50FV868FnonsynGtATtT860.752867-2869
ORF1ab/nsp350V50FV868FnonsynGtATtC820.252867-2869
ORF1ab/nsp350V50EV868EnonsyngTagAa760.8571432867-2869
ORF1ab/nsp350V50EV868EnonsyngTAgAG710.1428572867-2869
ORF1ab/nsp350V50del1V868del1delgtAgt-6612867-2869
ORF1ab/nsp350V50QV868QnonsynGTaCAa420.52867-2869
ORF1ab/nsp350V50QV868QnonsynGTACAG420.52867-2869
ORF1ab/nsp350V50GV868GnonsyngTagGa2212867-2869
ORF1ab/nsp350V50CV868CnonsynGTATGT1112867-2869
ORF1ab/nsp350V50XV868XnonsynGTaTAa1112867-2869
ORF1ab/nsp350V50PV868PnonsynGTACCG1112867-2869
ORF1ab/nsp350V50del2V868del2delGTa--a1112867-2869
ORF1ab/nsp350V50KV868KnonsynGTaAAa1112867-2869

Details of the mutation no within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF1ab/nsp350V50LGtaTta23802386All0.000455
ORF1ab/nsp350V50LGtaCta42386All0.000001
ORF1ab/nsp350V50LGtACtG12386All0
ORF1ab/nsp350V50LGtATtG12386All0
ORF1ab/nsp350V50VgtAgtG16941744All0.000324
ORF1ab/nsp350V50VgtAgtT461744All0.000009
ORF1ab/nsp350V50VgtAgtC41744All0.000001
ORF1ab/nsp350V50LGtaTta12141214B.1.5260.028534
ORF1ab/nsp350V50VgtAgtG12131213B.1.1.2770.920334
ORF1ab/nsp350V50LGtaTta370370B.1.20.003258
ORF1ab/nsp350V50IGtaAta230234All0.000044
ORF1ab/nsp350V50IGtAAtT2234All0
ORF1ab/nsp350V50IGtAAtC2234All0
ORF1ab/nsp350V50VgtAgtG162162K.31
ORF1ab/nsp350V50AgTagCa160160All0.000031
ORF1ab/nsp350V50delGTA---118118All0.000023
ORF1ab/nsp350V50AgTagCa105105AY.40.000163
ORF1ab/nsp350V50LGtaTta9494AY.340.009115
ORF1ab/nsp350V50LGtaTta9090B.1.5750.027306
ORF1ab/nsp350V50VgtAgtG8282B.10.000751
ORF1ab/nsp350V50LGtaTta8181AY.40.000126
ORF1ab/nsp350V50IGtaAta7878AY.290.00123
ORF1ab/nsp350V50LGtaTta6163B.1.1.5190.002422
ORF1ab/nsp350V50LGtaCta163B.1.1.5190.00004
ORF1ab/nsp350V50LGtACtG163B.1.1.5190.00004
ORF1ab/nsp350V50LGtaTta4849B.1.1.70.000043
ORF1ab/nsp350V50LGtaCta149B.1.1.70.000001
ORF1ab/nsp350V50VgtAgtG4242K.11
ORF1ab/nsp350V50LGtaTta4141B.10.000376
ORF1ab/nsp350V50LGtaTta3838B.1.617.20.000143
ORF1ab/nsp350V50LGtaTta3737B.1.3510.0011
ORF1ab/nsp350V50VgtAgtG2235B.1.1.70.00002
ORF1ab/nsp350V50VgtAgtT1335B.1.1.70.000012
ORF1ab/nsp350V50LGtaTta2828AY.1030.000174
ORF1ab/nsp350V50IGtaAta2727B.1.4780.317647
ORF1ab/nsp350V50VgtAgtG2525K.21
ORF1ab/nsp350V50IGtaAta2424B.1.1.70.000021
ORF1ab/nsp350V50LGtaTta2223AY.430.000097
ORF1ab/nsp350V50LGtaCta123AY.430.000004
ORF1ab/nsp350V50VgtAgtT1519AY.250.00009
ORF1ab/nsp350V50VgtAgtG319AY.250.000018
ORF1ab/nsp350V50VgtAgtC119AY.250.000006
ORF1ab/nsp350V50delGTA---1919B.1.1.3110.006805
ORF1ab/nsp350V50IGtaAta1616AY.40.000025
ORF1ab/nsp350V50delGTA---1515AY.50.00031
ORF1ab/nsp350V50LGtaTta1414P.10.000221
ORF1ab/nsp350V50AgTagCa1313AY.30.000129
ORF1ab/nsp350V50delGTA---1313AY.40.00002
ORF1ab/nsp350V50IGtaAta1313P.10.000205
ORF1ab/nsp350V50LGtaTta1212AY.300.004749
ORF1ab/nsp350V50VgtAgtG1111AY.200.000428
ORF1ab/nsp350V50VgtAgtG1111B.1.36.170.005435
ORF1ab/nsp350V50LGtaTta1010B.1.4290.000235
ORF1ab/nsp350V50AgTagCa99AY.1030.000056
ORF1ab/nsp350V50VgtAgtT89AY.50.000165
ORF1ab/nsp350V50VgtAgtG19AY.50.000021
ORF1ab/nsp350V50LGtaTta99AY.5.30.003036
ORF1ab/nsp350V50VgtAgtG99AY.99.20.000829
ORF1ab/nsp350V50LGtaTta99B.1.10.000163
ORF1ab/nsp350V50delGTA---99B.1.1.70.000008
ORF1ab/nsp350V50FGtATtT68All0.000001
ORF1ab/nsp350V50FGtATtC28All0
ORF1ab/nsp350V50VgtAgtG78AY.1170.000592
ORF1ab/nsp350V50VgtAgtT18AY.1170.000085
ORF1ab/nsp350V50LGtaTta88AY.39.10.000317
ORF1ab/nsp350V50LGtaTta88AZ.10.006938
ORF1ab/nsp350V50delGTA---88B.10.000073
ORF1ab/nsp350V50LGtaTta88C.380.064516
ORF1ab/nsp350V50EgTagAa67All0.000001
ORF1ab/nsp350V50EgTAgAG17All0
ORF1ab/nsp350V50delGTA---77AY.250.000042
ORF1ab/nsp350V50VgtAgtG67AY.40.000009
ORF1ab/nsp350V50VgtAgtT17AY.40.000002
ORF1ab/nsp350V50VgtAgtG67AY.440.000037
ORF1ab/nsp350V50VgtAgtC17AY.440.000006
ORF1ab/nsp350V50LGtaTta77B.1.1600.000218
ORF1ab/nsp350V50VgtAgtG77B.1.1770.000092
ORF1ab/nsp350V50LGtaTta67B.1.1770.000079
ORF1ab/nsp350V50LGtaCta17B.1.1770.000013
ORF1ab/nsp350V50AgTagCa77B.1.20.000062
ORF1ab/nsp350V50del1gtAgt-66All0.000001
ORF1ab/nsp350V50LGtaTta66AY.200.000233
ORF1ab/nsp350V50LGtaTta66AY.250.000036
ORF1ab/nsp350V50LGtaTta66AY.670.002786
ORF1ab/nsp350V50LGtaTta66AY.830.010345
ORF1ab/nsp350V50AgTagCa66B.1.1.70.000005
ORF1ab/nsp350V50LGtaTta66B.1.160.330.026549
ORF1ab/nsp350V50VgtAgtG66B.1.20.000053
ORF1ab/nsp350V50LGtaTta66B.1.4270.000303
ORF1ab/nsp350V50LGtaTta55AY.330.000334
ORF1ab/nsp350V50IGtaAta55B.10.000046
ORF1ab/nsp350V50VgtAgtG55B.1.10.000091
ORF1ab/nsp350V50IGtaAta55B.1.1530.09434
ORF1ab/nsp350V50VgtAgtG55B.1.160.260.012107
ORF1ab/nsp350V50LGtaTta55B.1.177.730.002831
ORF1ab/nsp350V50VgtAgtG55B.1.177.810.000947
ORF1ab/nsp350V50IGtaAta55B.1.2430.000348
ORF1ab/nsp350V50IGtaAta55B.1.3560.008636
ORF1ab/nsp350V50LGtaTta55B.1.5580.022831
ORF1ab/nsp350V50LGtaTta55B.1.5960.000436
ORF1ab/nsp350V50VgtAgtG45B.1.617.20.000015
ORF1ab/nsp350V50VgtAgtT15B.1.617.20.000004
ORF1ab/nsp350V50LGtaTta55B.60.00455
ORF1ab/nsp350V50FGtATtT240.111111
ORF1ab/nsp350V50IGtAAtT240.111111
ORF1ab/nsp350V50IGtAAtC240.111111
ORF1ab/nsp350V50FGtATtC240.111111
ORF1ab/nsp350V50QGTaCAa24All0
ORF1ab/nsp350V50QGTACAG24All0
ORF1ab/nsp350V50VgtAgtG24AY.1190.000071
ORF1ab/nsp350V50VgtAgtT24AY.1190.000071
ORF1ab/nsp350V50LGtaTta44AY.50.000083
ORF1ab/nsp350V50LGtaTta44B.1.1.3180.001207
ORF1ab/nsp350V50LGtaTta33AY.1000.000138
ORF1ab/nsp350V50LGtaTta33AY.1020.00008
ORF1ab/nsp350V50VgtAgtG33AY.230.000209
ORF1ab/nsp350V50IGtaAta33AY.250.000018
ORF1ab/nsp350V50VgtAgtG33AY.30.00003
ORF1ab/nsp350V50delGTA---33AY.30.00003
ORF1ab/nsp350V50VgtAgtG33AY.330.0002
ORF1ab/nsp350V50VgtAgtG33AY.360.000445
ORF1ab/nsp350V50LGtaTta33AY.440.000018
ORF1ab/nsp350V50LGtaTta33AY.540.000286
ORF1ab/nsp350V50IGtaAta33AY.680.000821
ORF1ab/nsp350V50LGtaTta33AY.9.20.00011
ORF1ab/nsp350V50VgtAgtG33B.1.1.1170.029126
ORF1ab/nsp350V50delGTA---33B.1.1.330.001263
ORF1ab/nsp350V50IGtaAta33B.1.110.30.002155
ORF1ab/nsp350V50VgtAgtG33B.1.1600.000094
ORF1ab/nsp350V50LGtaTta33B.1.1790.011278
ORF1ab/nsp350V50IGtaAta33B.1.3510.000089
ORF1ab/nsp350V50IGtaAta33B.1.5260.000071
ORF1ab/nsp350V50VgtAgtG33B.1.5960.000261
ORF1ab/nsp350V50IGtaAta33B.1.617.20.000011
ORF1ab/nsp350V50AgTagCa33B.1.617.20.000011
ORF1ab/nsp350V50AgTagCa33B.1.621.10.001517
ORF1ab/nsp350V50delGTA---33P.10.000047
ORF1ab/nsp350V50delGTA---220.111111
ORF1ab/nsp350V50LGtaTta22A.23.10.001408
ORF1ab/nsp350V50GgTagGa22All0
ORF1ab/nsp350V50VgtAgtT12AY.1020.000027
ORF1ab/nsp350V50VgtAgtG12AY.1020.000027
ORF1ab/nsp350V50IGtaAta22AY.1180.000125
ORF1ab/nsp350V50LGtaTta22AY.130.000322
ORF1ab/nsp350V50LGtaTta22AY.260.000057
ORF1ab/nsp350V50VgtAgtG22AY.260.000057
ORF1ab/nsp350V50LGtaTta22AY.270.000129
ORF1ab/nsp350V50LGtaTta22AY.290.000032
ORF1ab/nsp350V50IGtaAta22AY.29.10.000441
ORF1ab/nsp350V50LGtaTta22AY.30.00002
ORF1ab/nsp350V50delGTA---22AY.360.000296
ORF1ab/nsp350V50VgtAgtG22AY.390.000049
ORF1ab/nsp350V50IGtaAta22AY.430.000009
ORF1ab/nsp350V50VgtAgtG22AY.430.000009
ORF1ab/nsp350V50IGtaAta22AY.440.000012
ORF1ab/nsp350V50del1gtAgt-22AY.440.000012
ORF1ab/nsp350V50AgTagCa22AY.450.000243
ORF1ab/nsp350V50VgtAgtG22AY.450.000243
ORF1ab/nsp350V50LGtaTta22AY.460.000208
ORF1ab/nsp350V50LGtaTta22AY.60.000082
ORF1ab/nsp350V50LGtaTta22AY.610.00021
ORF1ab/nsp350V50VgtAgtG22AY.740.000231
ORF1ab/nsp350V50LGtaTta22AY.75.10.000361
ORF1ab/nsp350V50IGtaAta22B.1.10.000036
ORF1ab/nsp350V50delGTA---22B.1.10.000036
ORF1ab/nsp350V50LGtaTta22B.1.1.280.000622
ORF1ab/nsp350V50LGtaTta22B.1.1.2830.046512
ORF1ab/nsp350V50delGTA---22B.1.1.2940.002532
ORF1ab/nsp350V50delGTA---22B.1.1.3480.001592
ORF1ab/nsp350V50LGtaTta22B.1.1.4310.032258
ORF1ab/nsp350V50QGTaCAa12B.1.1.5190.00004
ORF1ab/nsp350V50EgTagAa12B.1.1.5190.00004
ORF1ab/nsp350V50EgTAgAG12B.1.1.5190.00004
ORF1ab/nsp350V50QGTACAG12B.1.1.5190.00004
ORF1ab/nsp350V50VgtAgtG22B.1.110.30.001437
ORF1ab/nsp350V50FGtATtT22B.1.1690.029851
ORF1ab/nsp350V50IGtaAta22B.1.177.600.000437
ORF1ab/nsp350V50VgtAgtG22B.1.177.730.001133
ORF1ab/nsp350V50IGtaAta22B.1.20.000018
ORF1ab/nsp350V50LGtaTta22B.1.2320.001075
ORF1ab/nsp350V50LGtaTta22B.1.2340.000264
ORF1ab/nsp350V50AgTagCa22B.1.2430.000139
ORF1ab/nsp350V50delGTA---22B.1.4240.016129
ORF1ab/nsp350V50VgtAgtG22B.1.4270.000101
ORF1ab/nsp350V50IGtaAta22B.1.4270.000101
ORF1ab/nsp350V50delGTA---22B.1.4290.000047
ORF1ab/nsp350V50LGtaTta22B.1.4590.008163
ORF1ab/nsp350V50delGTA---22B.1.5950.000522
ORF1ab/nsp350V50AgTagCa22B.1.617.10.000258
ORF1ab/nsp350V50LGtaTta22B.1.6370.000146
ORF1ab/nsp350V50LGtaTta22D.20.00015
ORF1ab/nsp350V50delGTA---22N.60.014184
ORF1ab/nsp350V50VgtAgtG22P.10.000032
ORF1ab/nsp350V50IGtaAta11A0.000387
ORF1ab/nsp350V50VgtAgtT11A.2.40.003367
ORF1ab/nsp350V50KGTaAAa11All0
ORF1ab/nsp350V50PGTACCG11All0
ORF1ab/nsp350V50del2GTa--a11All0
ORF1ab/nsp350V50CGTATGT11All0
ORF1ab/nsp350V50XGTaTAa11All0
ORF1ab/nsp350V50LGtaTta11AP.10.001502
ORF1ab/nsp350V50IGtaAta11AY.1030.000006
ORF1ab/nsp350V50VgtAgtG11AY.1030.000006
ORF1ab/nsp350V50delGTA---11AY.1030.000006
ORF1ab/nsp350V50LGtaTta11AY.1050.000643
ORF1ab/nsp350V50delGTA---11AY.1080.001103
ORF1ab/nsp350V50LGtaTta11AY.1160.000287
ORF1ab/nsp350V50LGtaTta11AY.1180.000063
ORF1ab/nsp350V50IGtaAta11AY.1200.000037
ORF1ab/nsp350V50LGtaTta11AY.1210.000135
ORF1ab/nsp350V50LGtaTta11AY.160.00038
ORF1ab/nsp350V50VgtAgtG11AY.20.000356
ORF1ab/nsp350V50delGTA---11AY.3.10.000085
ORF1ab/nsp350V50AgTagCa11AY.320.000532
ORF1ab/nsp350V50LGtaTta11AY.320.000532
ORF1ab/nsp350V50LGtaTta11AY.390.000025
ORF1ab/nsp350V50IGtaAta11AY.39.10.00004
ORF1ab/nsp350V50LGtaTta11AY.4.20.000022
ORF1ab/nsp350V50IGtaAta11AY.4.20.000022
ORF1ab/nsp350V50LGtaTta11AY.4.50.000107
ORF1ab/nsp350V50AgTagCa11AY.420.00004
ORF1ab/nsp350V50VgtAgtT11AY.420.00004
ORF1ab/nsp350V50delGTA---11AY.430.000004
ORF1ab/nsp350V50AgTagCa11AY.440.000006
ORF1ab/nsp350V50QGTaCAa11AY.440.000006
ORF1ab/nsp350V50LGtaTta11AY.46.40.000165
ORF1ab/nsp350V50LGtaTta11AY.46.60.000072
ORF1ab/nsp350V50LGtaTta11AY.470.000031
ORF1ab/nsp350V50IGtaAta11AY.5.30.000337
ORF1ab/nsp350V50LGtaTta11AY.550.000917
ORF1ab/nsp350V50AgTagCa11AY.550.000917
ORF1ab/nsp350V50VgtAgtC11AY.590.00053
ORF1ab/nsp350V50del2GTa--a11AY.60.000041
ORF1ab/nsp350V50VgtAgtG11AY.610.000105
ORF1ab/nsp350V50VgtAgtG11AY.7.20.000559
ORF1ab/nsp350V50delGTA---11AY.7.20.000559
ORF1ab/nsp350V50LGtaTta11AY.730.000665
ORF1ab/nsp350V50LGtaTta11AY.750.000056
ORF1ab/nsp350V50LGtaTta11AY.80.000606
ORF1ab/nsp350V50LGtaTta11AY.840.000437
ORF1ab/nsp350V50LGtaTta11AY.90.000068
ORF1ab/nsp350V50IGtaAta11AY.9.10.000084
ORF1ab/nsp350V50delGTA---11AY.9.20.000037
ORF1ab/nsp350V50LGtaTta11AY.98.10.000048
ORF1ab/nsp350V50VgtAgtG11B0.000128
ORF1ab/nsp350V50AgTagCa11B.10.000009
ORF1ab/nsp350V50FGtATtT11B.10.000009
ORF1ab/nsp350V50del1gtAgt-11B.1.10.000018
ORF1ab/nsp350V50VgtAgtG11B.1.1.10.000327
ORF1ab/nsp350V50LGtaTta11B.1.1.1530.001095
ORF1ab/nsp350V50LGtaTta11B.1.1.1690.018182
ORF1ab/nsp350V50LGtaTta11B.1.1.2070.001182
ORF1ab/nsp350V50delGTA---11B.1.1.2360.006897
ORF1ab/nsp350V50EgTagAa11B.1.1.250.000569
ORF1ab/nsp350V50LGtATtG11B.1.1.2770.000759
ORF1ab/nsp350V50IGtaAta11B.1.1.280.000311
ORF1ab/nsp350V50VgtAgtT11B.1.1.2910.000742
ORF1ab/nsp350V50VgtAgtG11B.1.1.2940.001266
ORF1ab/nsp350V50VgtAgtG11B.1.1.2970.002237
ORF1ab/nsp350V50LGtaTta11B.1.1.3220.008772
ORF1ab/nsp350V50LGtaTta11B.1.1.3260.001761
ORF1ab/nsp350V50VgtAgtG11B.1.1.330.000421
ORF1ab/nsp350V50LGtaTta11B.1.1.3480.000796
ORF1ab/nsp350V50LGtaTta11B.1.1.3750.011905
ORF1ab/nsp350V50delGTA---11B.1.1.4160.000905
ORF1ab/nsp350V50LGtaTta11B.1.1.4160.000905
ORF1ab/nsp350V50LGtaTta11B.1.1.4480.002033
ORF1ab/nsp350V50VgtAgtG11B.1.1.5190.00004
ORF1ab/nsp350V50EgTagAa11B.1.1.70.000001
ORF1ab/nsp350V50KGTaAAa11B.1.1.70.000001
ORF1ab/nsp350V50GgTagGa11B.1.1.70.000001
ORF1ab/nsp350V50FGtATtT11B.1.1.80.003584
ORF1ab/nsp350V50VgtAgtG11B.1.1.830.00271
ORF1ab/nsp350V50LGtaTta11B.1.1400.018868
ORF1ab/nsp350V50IGtaAta11B.1.1770.000013
ORF1ab/nsp350V50AgTagCa11B.1.177.100.000878
ORF1ab/nsp350V50VgtAgtG11B.1.177.120.000152
ORF1ab/nsp350V50EgTagAa11B.1.177.230.003236
ORF1ab/nsp350V50delGTA---11B.1.177.510.004566
ORF1ab/nsp350V50VgtAgtG11B.1.1990.004132
ORF1ab/nsp350V50del1gtAgt-11B.1.20.000009
ORF1ab/nsp350V50XGTaTAa11B.1.20.000009
ORF1ab/nsp350V50LGtaTta11B.1.220.001318
ORF1ab/nsp350V50EgTagAa11B.1.2400.000216
ORF1ab/nsp350V50VgtAgtG11B.1.2400.000216
ORF1ab/nsp350V50VgtAgtG11B.1.2580.000067
ORF1ab/nsp350V50delGTA---11B.1.3510.00003
ORF1ab/nsp350V50VgtAgtG11B.1.351.30.000876
ORF1ab/nsp350V50LGtaTta11B.1.36.80.001
ORF1ab/nsp350V50LGtaTta11B.1.36.90.003215
ORF1ab/nsp350V50VgtAgtT11B.1.3690.000285
ORF1ab/nsp350V50CGTATGT11B.1.3750.00082
ORF1ab/nsp350V50IGtaAta11B.1.3810.007812
ORF1ab/nsp350V50EgTagAa11B.1.3960.000706
ORF1ab/nsp350V50VgtAgtG11B.1.4040.001302
ORF1ab/nsp350V50VgtAgtC11B.1.4160.001269
ORF1ab/nsp350V50LGtaTta11B.1.4220.000812
ORF1ab/nsp350V50delGTA---11B.1.4270.00005
ORF1ab/nsp350V50QGTACAG11B.1.4290.000024
ORF1ab/nsp350V50IGtaAta11B.1.4290.000024
ORF1ab/nsp350V50delGTA---11B.1.4620.007246
ORF1ab/nsp350V50LGtaTta11B.1.466.20.000391
ORF1ab/nsp350V50IGtaAta11B.1.4990.00105
ORF1ab/nsp350V50delGTA---11B.1.5610.000397
ORF1ab/nsp350V50del1gtAgt-11B.1.5640.000426
ORF1ab/nsp350V50IGtaAta11B.1.5950.000261
ORF1ab/nsp350V50IGtaAta11B.1.5960.000087
ORF1ab/nsp350V50GgTagGa11B.1.617.20.000004
ORF1ab/nsp350V50delGTA---11B.1.617.20.000004
ORF1ab/nsp350V50del1gtAgt-11B.1.617.20.000004
ORF1ab/nsp350V50PGTACCG11B.1.617.30.002985
ORF1ab/nsp350V50LGtaTta11B.1.6230.000536
ORF1ab/nsp350V50VgtAgtG11B.1.6270.00202
ORF1ab/nsp350V50LGtaTta11B.30.000831
ORF1ab/nsp350V50delGTA---11B.570.015152
ORF1ab/nsp350V50delGTA---11C.170.055556
ORF1ab/nsp350V50delGTA---11C.360.000911
ORF1ab/nsp350V50VgtAgtG11C.360.000911
ORF1ab/nsp350V50LGtaTta11C.36.20.034483
ORF1ab/nsp350V50AgTagCa11C.370.000116
ORF1ab/nsp350V50delGTA---11D.20.000075
ORF1ab/nsp350V50IGtaAta11N.40.004255
ORF1ab/nsp350V50LGtaTta11N.60.007092
ORF1ab/nsp350V50delGTA---11P.1.10.000318
ORF1ab/nsp350V50LGtaTta11P.1.10.000318
ORF1ab/nsp350V50LGtaTta11P.1.120.000484
ORF1ab/nsp350V50IGtaAta11P.1.70.000319
ORF1ab/nsp350V50VgtAgtG11P.20.000187
ORF1ab/nsp350V50LGtaTta11Q.10.000126
ORF1ab/nsp350V50delGTA---11Q.20.000613
ORF1ab/nsp350V50IGtaAta11Q.80.000165
ORF1ab/nsp350V50AgTagCa11Q.80.000165
ORF1ab/nsp350V50IGtaAta11R.10.00009

CoV-GLUE is still in development. CoV-GLUE was originally developed as part of COG-UK by Josh Singer using the GLUE framework at the MRC-University of Glasgow Centre for Virus Research (CVR). In 2021 it was redeveloped by Richard Orton to scale to the millions of genome sequences available. We acknowledge support from the MRC (MC_UU_12014/12), WT (220977/Z/20/Z) and UKRI G2P (MR/W005611/1). Please contact Richard Orton with any queries: Richard.Orton@glasgow.ac.uk

CoV-GLUE uses sequence data from GISAID. GISAID data provided via this web application is subject to GISAID's Terms and Conditions.