CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF1ab/nsp3 : CodonNum = 497

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF1ab/nsp3497K497KK1315KsynaaAaaG44444414208-4210
ORF1ab/nsp3497K497RK1315RnonsynaAaaGa2092080.9952154208-4210
ORF1ab/nsp3497K497RK1315RnonsynaAAaGG20910.004784694208-4210
ORF1ab/nsp3497K497TK1315TnonsynaAaaCa1371350.9854014208-4210
ORF1ab/nsp3497K497TK1315TnonsynaAAaCC13720.01459854208-4210
ORF1ab/nsp3497K497QK1315QnonsynAaaCaa484814208-4210
ORF1ab/nsp3497K497IK1315InonsynaAaaTa313114208-4210
ORF1ab/nsp3497K497EK1315EnonsynAaaGaa313114208-4210
ORF1ab/nsp3497K497delK1315deldelAAA---242414208-4210
ORF1ab/nsp3497K497NK1315NnonsynaaAaaC22140.6363644208-4210
ORF1ab/nsp3497K497NK1315NnonsynaaAaaT2280.3636364208-4210
ORF1ab/nsp3497K497del1K1315del1delAaa-aa6614208-4210
ORF1ab/nsp3497K497SK1315SnonsynaAAaGC3314208-4210
ORF1ab/nsp3497K497del2K1315del2delAAa--a2214208-4210
ORF1ab/nsp3497K497MK1315MnonsynaAAaTG1114208-4210
ORF1ab/nsp3497K497LK1315LnonsynAAaCTa1114208-4210
ORF1ab/nsp3497K497XK1315XnonsynAaaTaa1114208-4210

Details of the mutation no within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF1ab/nsp3497K497KaaAaaG444444All0.000085
ORF1ab/nsp3497K497KaaAaaG279279AY.290.004401
ORF1ab/nsp3497K497RaAaaGa208209All0.00004
ORF1ab/nsp3497K497RaAAaGG1209All0
ORF1ab/nsp3497K497TaAaaCa135137All0.000026
ORF1ab/nsp3497K497TaAAaCC2137All0
ORF1ab/nsp3497K497RaAaaGa9696B.1.1.70.000086
ORF1ab/nsp3497K497TaAaaCa7575B.1.1.70.000067
ORF1ab/nsp3497K497QAaaCaa4848All0.000009
ORF1ab/nsp3497K497EAaaGaa3131All0.000006
ORF1ab/nsp3497K497IaAaaTa3131All0.000006
ORF1ab/nsp3497K497TaAaaCa2828B.10.000256
ORF1ab/nsp3497K497IaAaaTa2626B.1.1.70.000023
ORF1ab/nsp3497K497KaaAaaG2525AY.200.000972
ORF1ab/nsp3497K497KaaAaaG2525B.1.1.70.000022
ORF1ab/nsp3497K497delAAA---2424All0.000005
ORF1ab/nsp3497K497NaaAaaC1422All0.000003
ORF1ab/nsp3497K497NaaAaaT822All0.000002
ORF1ab/nsp3497K497QAaaCaa1717B.1.1.70.000015
ORF1ab/nsp3497K497TaAaaCa1717B.1.4290.0004
ORF1ab/nsp3497K497QAaaCaa1616B.1.1.130.571429
ORF1ab/nsp3497K497KaaAaaG1515AY.40.000023
ORF1ab/nsp3497K497EAaaGaa1515B.1.1.70.000013
ORF1ab/nsp3497K497RaAaaGa1010AY.1200.000372
ORF1ab/nsp3497K497RaAaaGa1010AY.290.000158
ORF1ab/nsp3497K497RaAaaGa1010AY.40.000016
ORF1ab/nsp3497K497RaAaaGa910B.10.000082
ORF1ab/nsp3497K497RaAAaGG110B.10.000009
ORF1ab/nsp3497K497RaAaaGa1010P.10.000158
ORF1ab/nsp3497K497KaaAaaG1010R.10.0009
ORF1ab/nsp3497K497KaaAaaG99AY.1160.002581
ORF1ab/nsp3497K497RaAaaGa99AY.440.000055
ORF1ab/nsp3497K497KaaAaaG99AY.440.000055
ORF1ab/nsp3497K497RaAaaGa99B.1.2210.000639
ORF1ab/nsp3497K497KaaAaaG88AY.430.000035
ORF1ab/nsp3497K497NaaAaaC57B.1.1.70.000004
ORF1ab/nsp3497K497NaaAaaT27B.1.1.70.000002
ORF1ab/nsp3497K497del1Aaa-aa66All0.000001
ORF1ab/nsp3497K497KaaAaaG55AY.470.000156
ORF1ab/nsp3497K497KaaAaaG55B.1.617.20.000019
ORF1ab/nsp3497K497TaAaaCa55Q.80.000825
ORF1ab/nsp3497K497RaAaaGa44AY.1110.000733
ORF1ab/nsp3497K497RaAaaGa44AY.250.000024
ORF1ab/nsp3497K497KaaAaaG44AY.29.10.000882
ORF1ab/nsp3497K497KaaAaaG44B.10.000037
ORF1ab/nsp3497K497KaaAaaG44B.1.1770.000053
ORF1ab/nsp3497K497RaAaaGa44B.1.3490.002859
ORF1ab/nsp3497K497SaAAaGC33All0.000001
ORF1ab/nsp3497K497RaAaaGa33AY.1030.000019
ORF1ab/nsp3497K497TaAaaCa33AY.200.000117
ORF1ab/nsp3497K497RaAaaGa33AY.30.00003
ORF1ab/nsp3497K497EAaaGaa33AY.40.000005
ORF1ab/nsp3497K497delAAA---33AY.430.000013
ORF1ab/nsp3497K497delAAA---33B.10.000027
ORF1ab/nsp3497K497delAAA---33B.1.1.70.000003
ORF1ab/nsp3497K497KaaAaaG33B.1.20.000026
ORF1ab/nsp3497K497QAaaCaa33B.1.4290.000071
ORF1ab/nsp3497K497RaAaaGa33B.1.617.20.000011
ORF1ab/nsp3497K497KaaAaaG220.111111
ORF1ab/nsp3497K497SaAAaGC220.111111
ORF1ab/nsp3497K497TaAAaCC220.111111
ORF1ab/nsp3497K497IaAaaTa220.111111
ORF1ab/nsp3497K497NaaAaaC220.111111
ORF1ab/nsp3497K497del2AAa--a22All0
ORF1ab/nsp3497K497RaAaaGa22AY.1020.000053
ORF1ab/nsp3497K497KaaAaaG22AY.1030.000012
ORF1ab/nsp3497K497KaaAaaG22AY.1090.001479
ORF1ab/nsp3497K497KaaAaaG22AY.250.000012
ORF1ab/nsp3497K497KaaAaaG22AY.30.00002
ORF1ab/nsp3497K497EAaaGaa22AY.430.000009
ORF1ab/nsp3497K497NaaAaaT12AY.430.000004
ORF1ab/nsp3497K497NaaAaaC12AY.430.000004
ORF1ab/nsp3497K497KaaAaaG22AY.460.000208
ORF1ab/nsp3497K497RaAaaGa22AY.470.000062
ORF1ab/nsp3497K497RaAaaGa22B.1.10.000036
ORF1ab/nsp3497K497KaaAaaG22B.1.10.000036
ORF1ab/nsp3497K497NaaAaaC12B.1.10.000018
ORF1ab/nsp3497K497NaaAaaT12B.1.10.000018
ORF1ab/nsp3497K497EAaaGaa22B.1.20.000018
ORF1ab/nsp3497K497TaAaaCa22B.1.20.000018
ORF1ab/nsp3497K497RaAaaGa22B.1.36.350.005208
ORF1ab/nsp3497K497KaaAaaG22B.1.4290.000047
ORF1ab/nsp3497K497KaaAaaG22B.1.5960.000174
ORF1ab/nsp3497K497QAaaCaa22B.1.617.20.000008
ORF1ab/nsp3497K497KaaAaaG22C.370.000232
ORF1ab/nsp3497K497RaAaaGa11A.2.50.000499
ORF1ab/nsp3497K497QAaaCaa11AA.70.009174
ORF1ab/nsp3497K497MaAAaTG11All0
ORF1ab/nsp3497K497LAAaCTa11All0
ORF1ab/nsp3497K497XAaaTaa11All0
ORF1ab/nsp3497K497KaaAaaG11AY.10.000396
ORF1ab/nsp3497K497del1Aaa-aa11AY.1000.000046
ORF1ab/nsp3497K497KaaAaaG11AY.1000.000046
ORF1ab/nsp3497K497delAAA---11AY.1030.000006
ORF1ab/nsp3497K497QAaaCaa11AY.1030.000006
ORF1ab/nsp3497K497KaaAaaG11AY.1110.000183
ORF1ab/nsp3497K497KaaAaaG11AY.1200.000037
ORF1ab/nsp3497K497KaaAaaG11AY.16.10.00047
ORF1ab/nsp3497K497delAAA---11AY.250.000006
ORF1ab/nsp3497K497EAaaGaa11AY.250.000006
ORF1ab/nsp3497K497QAaaCaa11AY.250.000006
ORF1ab/nsp3497K497RaAaaGa11AY.340.000097
ORF1ab/nsp3497K497EAaaGaa11AY.390.000025
ORF1ab/nsp3497K497NaaAaaT11AY.40.000002
ORF1ab/nsp3497K497QAaaCaa11AY.40.000002
ORF1ab/nsp3497K497EAaaGaa11AY.4.20.000022
ORF1ab/nsp3497K497delAAA---11AY.4.50.000107
ORF1ab/nsp3497K497QAaaCaa11AY.440.000006
ORF1ab/nsp3497K497MaAAaTG11AY.440.000006
ORF1ab/nsp3497K497del1Aaa-aa11AY.440.000006
ORF1ab/nsp3497K497NaaAaaT11AY.440.000006
ORF1ab/nsp3497K497KaaAaaG11AY.450.000122
ORF1ab/nsp3497K497QAaaCaa11AY.46.20.000635
ORF1ab/nsp3497K497KaaAaaG11AY.50.000021
ORF1ab/nsp3497K497NaaAaaT11AY.5.30.000337
ORF1ab/nsp3497K497KaaAaaG11AY.540.000095
ORF1ab/nsp3497K497RaAaaGa11AY.740.000116
ORF1ab/nsp3497K497delAAA---11AY.810.001992
ORF1ab/nsp3497K497TaAaaCa11AY.880.000884
ORF1ab/nsp3497K497EAaaGaa11AY.98.10.000048
ORF1ab/nsp3497K497delAAA---11AY.990.001049
ORF1ab/nsp3497K497IaAaaTa11B.10.000009
ORF1ab/nsp3497K497del1Aaa-aa11B.10.000009
ORF1ab/nsp3497K497EAaaGaa11B.10.000009
ORF1ab/nsp3497K497delAAA---11B.1.10.000018
ORF1ab/nsp3497K497KaaAaaG11B.1.1.100.001115
ORF1ab/nsp3497K497KaaAaaG11B.1.1.1410.002012
ORF1ab/nsp3497K497IaAaaTa11B.1.1.1530.001095
ORF1ab/nsp3497K497delAAA---11B.1.1.2160.00089
ORF1ab/nsp3497K497LAAaCTa11B.1.1.260.005236
ORF1ab/nsp3497K497KaaAaaG11B.1.1.3010.001179
ORF1ab/nsp3497K497RaAaaGa11B.1.1.3160.000925
ORF1ab/nsp3497K497KaaAaaG11B.1.1.3170.000412
ORF1ab/nsp3497K497delAAA---11B.1.1.5190.00004
ORF1ab/nsp3497K497KaaAaaG11B.1.1.5190.00004
ORF1ab/nsp3497K497del1Aaa-aa11B.1.1.70.000001
ORF1ab/nsp3497K497del2AAa--a11B.1.1.70.000001
ORF1ab/nsp3497K497EAaaGaa11B.1.1600.000031
ORF1ab/nsp3497K497QAaaCaa11B.1.1600.000031
ORF1ab/nsp3497K497TaAaaCa11B.1.1770.000013
ORF1ab/nsp3497K497EAaaGaa11B.1.1770.000013
ORF1ab/nsp3497K497QAaaCaa11B.1.177.210.000076
ORF1ab/nsp3497K497del1Aaa-aa11B.1.177.230.003236
ORF1ab/nsp3497K497KaaAaaG11B.1.177.320.00135
ORF1ab/nsp3497K497RaAaaGa11B.1.177.440.000519
ORF1ab/nsp3497K497NaaAaaC11B.1.177.450.000381
ORF1ab/nsp3497K497KaaAaaG11B.1.177.580.001332
ORF1ab/nsp3497K497KaaAaaG11B.1.177.70.000165
ORF1ab/nsp3497K497EAaaGaa11B.1.177.70.000165
ORF1ab/nsp3497K497delAAA---11B.1.177.860.000183
ORF1ab/nsp3497K497XAaaTaa11B.1.20.000009
ORF1ab/nsp3497K497NaaAaaC11B.1.20.000009
ORF1ab/nsp3497K497QAaaCaa11B.1.2210.000071
ORF1ab/nsp3497K497KaaAaaG11B.1.2400.000216
ORF1ab/nsp3497K497NaaAaaC11B.1.2580.000067
ORF1ab/nsp3497K497RaAaaGa11B.1.2580.000067
ORF1ab/nsp3497K497SaAAaGC11B.1.2580.000067
ORF1ab/nsp3497K497delAAA---11B.1.258.160.001637
ORF1ab/nsp3497K497RaAaaGa11B.1.3510.00003
ORF1ab/nsp3497K497delAAA---11B.1.360.000146
ORF1ab/nsp3497K497RaAaaGa11B.1.36.310.001751
ORF1ab/nsp3497K497RaAaaGa11B.1.4000.000429
ORF1ab/nsp3497K497RaAaaGa11B.1.4700.001404
ORF1ab/nsp3497K497RaAaaGa11B.1.5180.011765
ORF1ab/nsp3497K497NaaAaaC11B.1.5230.002451
ORF1ab/nsp3497K497EAaaGaa11B.1.5250.000113
ORF1ab/nsp3497K497RaAaaGa11B.1.5260.000024
ORF1ab/nsp3497K497RaAaaGa11B.1.5450.014493
ORF1ab/nsp3497K497TaAaaCa11B.1.617.20.000004
ORF1ab/nsp3497K497IaAaaTa11B.1.617.20.000004
ORF1ab/nsp3497K497NaaAaaC11B.1.617.20.000004
ORF1ab/nsp3497K497del2AAa--a11B.1.617.20.000004
ORF1ab/nsp3497K497del1Aaa-aa11B.1.617.30.002985
ORF1ab/nsp3497K497delAAA---11B.570.015152
ORF1ab/nsp3497K497RaAaaGa11C.260.007353
ORF1ab/nsp3497K497NaaAaaT11C.370.000116
ORF1ab/nsp3497K497delAAA---11P.10.000016
ORF1ab/nsp3497K497QAaaCaa11P.10.000016
ORF1ab/nsp3497K497KaaAaaG11P.1.10.000318
ORF1ab/nsp3497K497TaAaaCa11P.1.140.000048
ORF1ab/nsp3497K497KaaAaaG11P.1.40.000977
ORF1ab/nsp3497K497TaAaaCa11P.20.000187
ORF1ab/nsp3497K497RaAaaGa11Q.10.000126
ORF1ab/nsp3497K497delAAA---11R.10.00009
ORF1ab/nsp3497K497RaAaaGa11R.10.00009
ORF1ab/nsp3497K497delAAA---11U.30.003861