CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF1ab/nsp3 : CodonNum = 496

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF1ab/nsp3496A496VA1314VnonsyngCggTg978997770.9987744205-4207
ORF1ab/nsp3496A496VA1314VnonsyngCGgTC978970.0007150884205-4207
ORF1ab/nsp3496A496VA1314VnonsyngCGgTT978930.0003064664205-4207
ORF1ab/nsp3496A496VA1314VnonsyngCGgTA978920.0002043114205-4207
ORF1ab/nsp3496A496AA1314AsyngcGgcT471141590.8828274205-4207
ORF1ab/nsp3496A496AA1314AsyngcGgcA47114550.09658254205-4207
ORF1ab/nsp3496A496AA1314AsyngcGgcC4711970.02059014205-4207
ORF1ab/nsp3496A496TA1314TnonsynGcgAcg9849820.9979674205-4207
ORF1ab/nsp3496A496TA1314TnonsynGcGAcA98410.001016264205-4207
ORF1ab/nsp3496A496TA1314TnonsynGcGAcT98410.001016264205-4207
ORF1ab/nsp3496A496SA1314SnonsynGcgTcg3333320.9969974205-4207
ORF1ab/nsp3496A496SA1314SnonsynGcGTcA33310.0030034205-4207
ORF1ab/nsp3496A496EA1314EnonsyngCggAg333314205-4207
ORF1ab/nsp3496A496delA1314deldelGCG---232314205-4207
ORF1ab/nsp3496A496PA1314PnonsynGcgCcg101014205-4207
ORF1ab/nsp3496A496GA1314GnonsyngCggGg540.84205-4207
ORF1ab/nsp3496A496del1A1314del1delgcGgc-530.64205-4207
ORF1ab/nsp3496A496del1A1314del1delGcg-cg510.24205-4207
ORF1ab/nsp3496A496del1A1314del1delGcGAc-510.24205-4207
ORF1ab/nsp3496A496GA1314GnonsyngCGgGA510.24205-4207
ORF1ab/nsp3496A496RA1314RnonsynGCGAGA430.754205-4207
ORF1ab/nsp3496A496LA1314LnonsynGCGTTA420.54205-4207
ORF1ab/nsp3496A496LA1314LnonsynGCGCTA420.54205-4207
ORF1ab/nsp3496A496RA1314RnonsynGCgAGg410.254205-4207
ORF1ab/nsp3496A496KA1314KnonsynGCgAAg1114205-4207
ORF1ab/nsp3496A496MA1314MnonsynGCgATg1114205-4207
ORF1ab/nsp3496A496del2A1314del2delGCG--A1114205-4207

Details of the mutation no within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF1ab/nsp3496A496VgCggTg97779789All0.00187
ORF1ab/nsp3496A496VgCGgTC79789All0.000001
ORF1ab/nsp3496A496VgCGgTT39789All0.000001
ORF1ab/nsp3496A496VgCGgTA29789All0
ORF1ab/nsp3496A496VgCggTg69596968B.1.1.70.00623
ORF1ab/nsp3496A496VgCGgTC76968B.1.1.70.000006
ORF1ab/nsp3496A496VgCGgTT26968B.1.1.70.000002
ORF1ab/nsp3496A496AgcGgcT41594711All0.000795
ORF1ab/nsp3496A496AgcGgcA4554711All0.000087
ORF1ab/nsp3496A496AgcGgcC974711All0.000019
ORF1ab/nsp3496A496TGcgAcg982984All0.000188
ORF1ab/nsp3496A496TGcGAcT1984All0
ORF1ab/nsp3496A496TGcGAcA1984All0
ORF1ab/nsp3496A496AgcGgcT708821B.1.1.70.000634
ORF1ab/nsp3496A496AgcGgcA107821B.1.1.70.000096
ORF1ab/nsp3496A496AgcGgcC6821B.1.1.70.000005
ORF1ab/nsp3496A496AgcGgcT618625AY.40.000962
ORF1ab/nsp3496A496AgcGgcA6625AY.40.000009
ORF1ab/nsp3496A496AgcGgcC1625AY.40.000002
ORF1ab/nsp3496A496AgcGgcT361390B.1.617.20.001359
ORF1ab/nsp3496A496AgcGgcA24390B.1.617.20.00009
ORF1ab/nsp3496A496AgcGgcC5390B.1.617.20.000019
ORF1ab/nsp3496A496SGcgTcg332333All0.000063
ORF1ab/nsp3496A496SGcGTcA1333All0
ORF1ab/nsp3496A496VgCggTg326326AY.1030.002024
ORF1ab/nsp3496A496TGcgAcg324325AY.430.001435
ORF1ab/nsp3496A496TGcGAcT1325AY.430.000004
ORF1ab/nsp3496A496VgCggTg260260AY.40.000405
ORF1ab/nsp3496A496AgcGgcT229233AY.430.001015
ORF1ab/nsp3496A496AgcGgcC2233AY.430.000009
ORF1ab/nsp3496A496AgcGgcA2233AY.430.000009
ORF1ab/nsp3496A496VgCggTg207207AY.3.10.017649
ORF1ab/nsp3496A496VgCggTg202202AY.4.20.004381
ORF1ab/nsp3496A496TGcgAcg178178B.1.1.70.000159
ORF1ab/nsp3496A496VgCggTg174174B.1.1770.002291
ORF1ab/nsp3496A496VgCggTg172172B.1.617.20.000648
ORF1ab/nsp3496A496SGcgTcg167167AY.40.00026
ORF1ab/nsp3496A496AgcGgcT156157AY.420.006276
ORF1ab/nsp3496A496AgcGgcC1157AY.420.00004
ORF1ab/nsp3496A496AgcGgcT150150B.1.1.3040.421348
ORF1ab/nsp3496A496AgcGgcT136140B.1.4290.0032
ORF1ab/nsp3496A496AgcGgcA4140B.1.4290.000094
ORF1ab/nsp3496A496AgcGgcT134134B.1.1.2430.546939
ORF1ab/nsp3496A496VgCggTg121121AY.250.000728
ORF1ab/nsp3496A496VgCggTg114114B.1.20.001004
ORF1ab/nsp3496A496AgcGgcT75111AY.30.000746
ORF1ab/nsp3496A496AgcGgcA22111AY.30.000219
ORF1ab/nsp3496A496AgcGgcC14111AY.30.000139
ORF1ab/nsp3496A496AgcGgcT111111B.1.177.50.137888
ORF1ab/nsp3496A496AgcGgcT85105B.1.20.000748
ORF1ab/nsp3496A496AgcGgcA18105B.1.20.000158
ORF1ab/nsp3496A496AgcGgcC2105B.1.20.000018
ORF1ab/nsp3496A496TGcgAcg9696B.1.5750.029126
ORF1ab/nsp3496A496AgcGgcT8087AY.1020.002121
ORF1ab/nsp3496A496AgcGgcA787AY.1020.000186
ORF1ab/nsp3496A496AgcGgcT6187B.10.000559
ORF1ab/nsp3496A496AgcGgcA2687B.10.000238
ORF1ab/nsp3496A496AgcGgcT6186AY.440.000371
ORF1ab/nsp3496A496AgcGgcA2486AY.440.000146
ORF1ab/nsp3496A496AgcGgcC186AY.440.000006
ORF1ab/nsp3496A496AgcGgcT5481AY.1030.000335
ORF1ab/nsp3496A496AgcGgcA2081AY.1030.000124
ORF1ab/nsp3496A496AgcGgcC781AY.1030.000043
ORF1ab/nsp3496A496AgcGgcT7178AY.1190.002507
ORF1ab/nsp3496A496AgcGgcA778AY.1190.000247
ORF1ab/nsp3496A496AgcGgcT7175AY.250.000427
ORF1ab/nsp3496A496AgcGgcA375AY.250.000018
ORF1ab/nsp3496A496AgcGgcC175AY.250.000006
ORF1ab/nsp3496A496VgCggTg7373AY.440.000444
ORF1ab/nsp3496A496VgCggTg7070B.1.177.70.01154
ORF1ab/nsp3496A496VgCggTg6161B.1.5260.001434
ORF1ab/nsp3496A496VgCggTg5959B.1.10.00107
ORF1ab/nsp3496A496AgcGgcT5555AY.730.036593
ORF1ab/nsp3496A496AgcGgcT5252AY.46.40.008554
ORF1ab/nsp3496A496AgcGgcT5252AY.980.004108
ORF1ab/nsp3496A496AgcGgcT4552P.10.000709
ORF1ab/nsp3496A496AgcGgcA752P.10.00011
ORF1ab/nsp3496A496VgCggTg5151AY.430.000226
ORF1ab/nsp3496A496VgCggTg4949B.10.000449
ORF1ab/nsp3496A496VgCggTg4344B.1.177.860.007888
ORF1ab/nsp3496A496VgCGgTT144B.1.177.860.000183
ORF1ab/nsp3496A496TGcgAcg4141AY.40.000064
ORF1ab/nsp3496A496AgcGgcT3140B.1.1770.000408
ORF1ab/nsp3496A496AgcGgcA540B.1.1770.000066
ORF1ab/nsp3496A496AgcGgcC440B.1.1770.000053
ORF1ab/nsp3496A496TGcgAcg3939B.1.4270.001969
ORF1ab/nsp3496A496EgCggAg3333All0.000006
ORF1ab/nsp3496A496AgcGgcT3232AY.450.003894
ORF1ab/nsp3496A496AgcGgcA2531B.1.177.570.007024
ORF1ab/nsp3496A496AgcGgcT631B.1.177.570.001686
ORF1ab/nsp3496A496AgcGgcT2929AY.1140.006702
ORF1ab/nsp3496A496VgCggTg2929B.1.3690.008272
ORF1ab/nsp3496A496AgcGgcT2828B.1.1.131
ORF1ab/nsp3496A496SGcgTcg2828B.1.4290.000659
ORF1ab/nsp3496A496AgcGgcT2426AY.200.000933
ORF1ab/nsp3496A496AgcGgcA126AY.200.000039
ORF1ab/nsp3496A496AgcGgcC126AY.200.000039
ORF1ab/nsp3496A496VgCggTg2626Q.80.004288
ORF1ab/nsp3496A496VgCggTg2626R.10.00234
ORF1ab/nsp3496A496AgcGgcT2525AY.360.003705
ORF1ab/nsp3496A496AgcGgcT2525B.1.36.220.030193
ORF1ab/nsp3496A496VgCggTg2525B.1.5170.010675
ORF1ab/nsp3496A496VgCggTg2424AY.30.000239
ORF1ab/nsp3496A496VgCggTg2424B.1.3510.000713
ORF1ab/nsp3496A496delGCG---2323All0.000004
ORF1ab/nsp3496A496AgcGgcT1823B.1.10.000327
ORF1ab/nsp3496A496AgcGgcA423B.1.10.000073
ORF1ab/nsp3496A496AgcGgcC123B.1.10.000018
ORF1ab/nsp3496A496TGcgAcg2323P.10.000362
ORF1ab/nsp3496A496TGcgAcg2222AY.30.000219
ORF1ab/nsp3496A496AgcGgcC2022B.1.5960.001743
ORF1ab/nsp3496A496AgcGgcT222B.1.5960.000174
ORF1ab/nsp3496A496VgCggTg2121AY.390.000519
ORF1ab/nsp3496A496AgcGgcT1221AY.390.000297
ORF1ab/nsp3496A496AgcGgcA821AY.390.000198
ORF1ab/nsp3496A496AgcGgcC121AY.390.000025
ORF1ab/nsp3496A496AgcGgcT2121B.1.177.810.003976
ORF1ab/nsp3496A496TGcgAcg2020AY.3.10.001705
ORF1ab/nsp3496A496TGcgAcg2020B.1.1.3060.008768
ORF1ab/nsp3496A496VgCggTg2020B.1.4290.000471
ORF1ab/nsp3496A496VgCggTg2020P.10.000315
ORF1ab/nsp3496A496VgCggTg1919AY.1170.001606
ORF1ab/nsp3496A496AgcGgcT1519AY.98.10.000726
ORF1ab/nsp3496A496AgcGgcA419AY.98.10.000194
ORF1ab/nsp3496A496VgCggTg1818B.1.1.5190.000715
ORF1ab/nsp3496A496AgcGgcT1518B.1.3510.000446
ORF1ab/nsp3496A496AgcGgcA318B.1.3510.000089
ORF1ab/nsp3496A496VgCggTg1818B.1.3980.053571
ORF1ab/nsp3496A496AgcGgcT1818B.1.5260.000423
ORF1ab/nsp3496A496SGcgTcg1717B.1.1.70.000015
ORF1ab/nsp3496A496SGcgTcg1717B.1.177.600.003713
ORF1ab/nsp3496A496VgCggTg1717B.1.2210.001208
ORF1ab/nsp3496A496AgcGgcT1616AY.290.000252
ORF1ab/nsp3496A496SGcgTcg1616AY.440.000097
ORF1ab/nsp3496A496EgCggAg1616B.1.1.70.000014
ORF1ab/nsp3496A496AgcGgcT1216B.1.360.001751
ORF1ab/nsp3496A496AgcGgcA416B.1.360.000584
ORF1ab/nsp3496A496VgCggTg1616Q.10.002021
ORF1ab/nsp3496A496VgCggTg1515AY.1020.000398
ORF1ab/nsp3496A496TGcgAcg1515AY.1030.000093
ORF1ab/nsp3496A496VgCggTg1515AY.290.000237
ORF1ab/nsp3496A496VgCggTg1414AY.200.000544
ORF1ab/nsp3496A496VgCggTg1414B.1.1.2140.000776
ORF1ab/nsp3496A496AgcGgcT1314B.1.2430.000905
ORF1ab/nsp3496A496AgcGgcC114B.1.2430.00007
ORF1ab/nsp3496A496AgcGgcT1313AY.340.001261
ORF1ab/nsp3496A496SGcgTcg1313B0.001662
ORF1ab/nsp3496A496VgCggTg1313C.390.245283
ORF1ab/nsp3496A496AgcGgcT1212AY.50.000248
ORF1ab/nsp3496A496VgCggTg1212B.1.2580.000799
ORF1ab/nsp3496A496TGcgAcg1212B.1.617.20.000045
ORF1ab/nsp3496A496SGcgTcg1212B.1.617.20.000045
ORF1ab/nsp3496A496TGcgAcg1111AY.390.000272
ORF1ab/nsp3496A496TGcgAcg1111AY.9.20.000404
ORF1ab/nsp3496A496TGcgAcg1111B.1.1.630.004244
ORF1ab/nsp3496A496VgCggTg1111B.1.360.001605
ORF1ab/nsp3496A496VgCggTg1111B.1.4000.004719
ORF1ab/nsp3496A496VgCggTg1111D.20.000825
ORF1ab/nsp3496A496VgCggTg1010AE.80.00489
ORF1ab/nsp3496A496PGcgCcg1010All0.000002
ORF1ab/nsp3496A496TGcgAcg1010AY.1020.000265
ORF1ab/nsp3496A496AgcGgcA1010AY.270.000647
ORF1ab/nsp3496A496TGcgAcg1010AY.440.000061
ORF1ab/nsp3496A496AgcGgcT1010AY.46.20.006353
ORF1ab/nsp3496A496VgCggTg1010AY.50.000206
ORF1ab/nsp3496A496AgcGgcT510AY.610.000524
ORF1ab/nsp3496A496AgcGgcC310AY.610.000314
ORF1ab/nsp3496A496AgcGgcA210AY.610.00021
ORF1ab/nsp3496A496AgcGgcT1010B.1.1.3720.006887
ORF1ab/nsp3496A496TGcgAcg1010B.1.1600.000312
ORF1ab/nsp3496A496AgcGgcT1010B.1.3690.002852
ORF1ab/nsp3496A496AgcGgcT710B.1.4270.000353
ORF1ab/nsp3496A496AgcGgcA310B.1.4270.000151
ORF1ab/nsp3496A496AgcGgcT99A.2.5.10.043269
ORF1ab/nsp3496A496AgcGgcT99AY.1180.000564
ORF1ab/nsp3496A496AgcGgcT99AY.140.000792
ORF1ab/nsp3496A496AgcGgcT89AY.330.000534
ORF1ab/nsp3496A496AgcGgcC19AY.330.000067
ORF1ab/nsp3496A496VgCggTg99AY.840.003937
ORF1ab/nsp3496A496VgCggTg99B.1.4270.000454
ORF1ab/nsp3496A496AgcGgcA99B.1.621.10.004552
ORF1ab/nsp3496A496VgCggTg88AY.1050.005145
ORF1ab/nsp3496A496AgcGgcT68AY.230.000418
ORF1ab/nsp3496A496AgcGgcA18AY.230.00007
ORF1ab/nsp3496A496AgcGgcC18AY.230.00007
ORF1ab/nsp3496A496AgcGgcT58AY.260.000142
ORF1ab/nsp3496A496AgcGgcA28AY.260.000057
ORF1ab/nsp3496A496AgcGgcC18AY.260.000028
ORF1ab/nsp3496A496AgcGgcC68B.1.1.3060.00263
ORF1ab/nsp3496A496AgcGgcT28B.1.1.3060.000877
ORF1ab/nsp3496A496AgcGgcT68B.1.1.5190.000238
ORF1ab/nsp3496A496AgcGgcA28B.1.1.5190.000079
ORF1ab/nsp3496A496VgCggTg88B.1.1600.00025
ORF1ab/nsp3496A496VgCggTg88B.1.2430.000557
ORF1ab/nsp3496A496AgcGgcT88B.1.4280.008163
ORF1ab/nsp3496A496VgCggTg88B.1.5250.000905
ORF1ab/nsp3496A496AgcGgcT77AY.1170.000592
ORF1ab/nsp3496A496TGcgAcg77AY.250.000042
ORF1ab/nsp3496A496VgCggTg77AY.350.001631
ORF1ab/nsp3496A496TGcgAcg77B.10.000064
ORF1ab/nsp3496A496AgcGgcT77B.1.177.320.009447
ORF1ab/nsp3496A496VgCggTg77B.1.36.290.003621
ORF1ab/nsp3496A496AgcGgcT77B.1.6280.002467
ORF1ab/nsp3496A496VgCggTg77C.370.000812
ORF1ab/nsp3496A496AgcGgcT77C.370.000812
ORF1ab/nsp3496A496SGcgTcg77P.1.140.000335
ORF1ab/nsp3496A496VgCggTg66A.20.003971
ORF1ab/nsp3496A496TGcgAcg66AY.260.00017
ORF1ab/nsp3496A496AgcGgcT66AY.4.20.00013
ORF1ab/nsp3496A496AgcGgcT56AY.460.00052
ORF1ab/nsp3496A496AgcGgcA16AY.460.000104
ORF1ab/nsp3496A496AgcGgcT66AY.60.000247
ORF1ab/nsp3496A496VgCggTg66AY.610.000629
ORF1ab/nsp3496A496AgcGgcT66AY.9.10.000502
ORF1ab/nsp3496A496AgcGgcT66AY.9.20.00022
ORF1ab/nsp3496A496VgCggTg66AY.99.20.000553
ORF1ab/nsp3496A496TGcgAcg66B.1.10.000109
ORF1ab/nsp3496A496AgcGgcT66B.1.1.4340.002091
ORF1ab/nsp3496A496TGcgAcg66B.1.20.000053
ORF1ab/nsp3496A496AgcGgcA66B.1.2340.000792
ORF1ab/nsp3496A496AgcGgcT66B.1.2580.000399
ORF1ab/nsp3496A496SGcgTcg66C.370.000696
ORF1ab/nsp3496A496AgcGgcT66P.1.170.000971
ORF1ab/nsp3496A496VgCggTg66P.1.170.000971
ORF1ab/nsp3496A496AgcGgcT66P.20.00112
ORF1ab/nsp3496A496GgCggGg45All0.000001
ORF1ab/nsp3496A496del1gcGgc-35All0.000001
ORF1ab/nsp3496A496del1Gcg-cg15All0
ORF1ab/nsp3496A496GgCGgGA15All0
ORF1ab/nsp3496A496del1GcGAc-15All0
ORF1ab/nsp3496A496SGcgTcg55AY.1030.000031
ORF1ab/nsp3496A496EgCggAg55AY.1070.00233
ORF1ab/nsp3496A496VgCggTg55AY.1190.000177
ORF1ab/nsp3496A496AgcGgcT35AY.1200.000112
ORF1ab/nsp3496A496AgcGgcA25AY.1200.000074
ORF1ab/nsp3496A496TGcgAcg55AY.160.001898
ORF1ab/nsp3496A496VgCggTg55AY.470.000156
ORF1ab/nsp3496A496AgcGgcT35AY.470.000093
ORF1ab/nsp3496A496AgcGgcA25AY.470.000062
ORF1ab/nsp3496A496AgcGgcT55AY.530.001438
ORF1ab/nsp3496A496AgcGgcT35AY.750.000168
ORF1ab/nsp3496A496AgcGgcA25AY.750.000112
ORF1ab/nsp3496A496AgcGgcA45B0.000511
ORF1ab/nsp3496A496AgcGgcT15B0.000128
ORF1ab/nsp3496A496AgcGgcT55B.1.1.2220.00102
ORF1ab/nsp3496A496VgCggTg55B.1.1.500.003394
ORF1ab/nsp3496A496AgcGgcA35B.1.1600.000094
ORF1ab/nsp3496A496AgcGgcT15B.1.1600.000031
ORF1ab/nsp3496A496AgcGgcC15B.1.1600.000031
ORF1ab/nsp3496A496VgCggTg55B.1.2400.001078
ORF1ab/nsp3496A496AgcGgcT55B.1.2410.004058
ORF1ab/nsp3496A496TGcgAcg55B.1.3510.000149
ORF1ab/nsp3496A496VgCggTg55B.1.4560.01634
ORF1ab/nsp3496A496VgCggTg55B.1.6270.010101
ORF1ab/nsp3496A496VgCggTg55B.1.6370.000365
ORF1ab/nsp3496A496AgcGgcT55P.1.140.000239
ORF1ab/nsp3496A496TGcgAcg340.166667
ORF1ab/nsp3496A496RGCGAGA340.166667
ORF1ab/nsp3496A496LGCGTTA240.111111
ORF1ab/nsp3496A496LGCGCTA240.111111
ORF1ab/nsp3496A496RGCgAGg140.055556
ORF1ab/nsp3496A496TGcGAcA140.055556
ORF1ab/nsp3496A496AgcGgcT34A.20.001985
ORF1ab/nsp3496A496AgcGgcC14A.20.000662
ORF1ab/nsp3496A496RGCGAGA34All0.000001
ORF1ab/nsp3496A496LGCGCTA24All0
ORF1ab/nsp3496A496LGCGTTA24All0
ORF1ab/nsp3496A496RGCgAGg14All0
ORF1ab/nsp3496A496AgcGgcC34AY.1000.000138
ORF1ab/nsp3496A496AgcGgcT14AY.1000.000046
ORF1ab/nsp3496A496AgcGgcC44AY.1010.001962
ORF1ab/nsp3496A496TGcgAcg44AY.290.000063
ORF1ab/nsp3496A496AgcGgcT44AY.29.10.000882
ORF1ab/nsp3496A496TGcgAcg44AY.4.20.000087
ORF1ab/nsp3496A496AgcGgcT44AY.4.2.10.000596
ORF1ab/nsp3496A496VgCggTg44AY.4.50.00043
ORF1ab/nsp3496A496VgCggTg44AY.420.000161
ORF1ab/nsp3496A496TGcgAcg44AY.50.000083
ORF1ab/nsp3496A496AgcGgcT44AY.5.40.001107
ORF1ab/nsp3496A496AgcGgcC24AY.550.001835
ORF1ab/nsp3496A496AgcGgcT14AY.550.000917
ORF1ab/nsp3496A496AgcGgcA14AY.550.000917
ORF1ab/nsp3496A496VgCggTg44AY.60.000165
ORF1ab/nsp3496A496VgCggTg44AY.9.10.000335
ORF1ab/nsp3496A496AgcGgcT34AY.910.002191
ORF1ab/nsp3496A496AgcGgcA14AY.910.00073
ORF1ab/nsp3496A496TGcgAcg44AY.98.10.000194
ORF1ab/nsp3496A496SGcgTcg44B.10.000037
ORF1ab/nsp3496A496SGcgTcg34B.1.10.000054
ORF1ab/nsp3496A496SGcGTcA14B.1.10.000018
ORF1ab/nsp3496A496VgCggTg44B.1.1.10.001307
ORF1ab/nsp3496A496AgcGgcT34B.1.1.10.00098
ORF1ab/nsp3496A496AgcGgcA14B.1.1.10.000327
ORF1ab/nsp3496A496AgcGgcT34B.1.1.2140.000166
ORF1ab/nsp3496A496AgcGgcA14B.1.1.2140.000055
ORF1ab/nsp3496A496TGcgAcg44B.1.1.2220.000816
ORF1ab/nsp3496A496AgcGgcT44B.1.1.280.001245
ORF1ab/nsp3496A496VgCggTg44B.1.1.2910.00297
ORF1ab/nsp3496A496VgCggTg44B.1.1.4870.022346
ORF1ab/nsp3496A496TGcgAcg44B.1.1.5190.000159
ORF1ab/nsp3496A496AgcGgcT44B.1.1.5260.014184
ORF1ab/nsp3496A496TGcgAcg44B.1.177.180.00464
ORF1ab/nsp3496A496VgCggTg44B.1.177.500.018779
ORF1ab/nsp3496A496AgcGgcT44B.1.440.033333
ORF1ab/nsp3496A496VgCggTg44B.1.5710.038835
ORF1ab/nsp3496A496AgcGgcA44D.20.0003
ORF1ab/nsp3496A496VgCggTg44P.1.140.000191
ORF1ab/nsp3496A496AgcGgcA330.166667
ORF1ab/nsp3496A496VgCggTg33AY.100.00159
ORF1ab/nsp3496A496TGcgAcg33AY.1000.000138
ORF1ab/nsp3496A496VgCggTg33AY.1000.000138
ORF1ab/nsp3496A496AgcGgcT33AY.1040.005952
ORF1ab/nsp3496A496AgcGgcT33AY.1110.000549
ORF1ab/nsp3496A496AgcGgcT33AY.1130.000427
ORF1ab/nsp3496A496VgCggTg33AY.1140.000693
ORF1ab/nsp3496A496TGcgAcg33AY.1170.000254
ORF1ab/nsp3496A496VgCggTg33AY.1180.000188
ORF1ab/nsp3496A496VgCggTg33AY.120.000948
ORF1ab/nsp3496A496AgcGgcT33AY.1210.000406
ORF1ab/nsp3496A496VgCggTg33AY.230.000209
ORF1ab/nsp3496A496VgCggTg33AY.260.000085
ORF1ab/nsp3496A496VgCggTg33AY.270.000194
ORF1ab/nsp3496A496SGcgTcg33AY.30.00003
ORF1ab/nsp3496A496AgcGgcT23AY.3.10.000171
ORF1ab/nsp3496A496AgcGgcC13AY.3.10.000085
ORF1ab/nsp3496A496VgCggTg33AY.330.0002
ORF1ab/nsp3496A496VgCggTg33AY.360.000445
ORF1ab/nsp3496A496AgcGgcT33AY.39.10.000119
ORF1ab/nsp3496A496AgcGgcT33AY.4.50.000322
ORF1ab/nsp3496A496delGCG---33AY.430.000013
ORF1ab/nsp3496A496SGcgTcg33AY.430.000013
ORF1ab/nsp3496A496TGcgAcg33AY.470.000093
ORF1ab/nsp3496A496AgcGgcT23AY.690.000373
ORF1ab/nsp3496A496AgcGgcA13AY.690.000187
ORF1ab/nsp3496A496AgcGgcT33AY.75.10.000541
ORF1ab/nsp3496A496AgcGgcT23AY.900.001369
ORF1ab/nsp3496A496AgcGgcA13AY.900.000684
ORF1ab/nsp3496A496AgcGgcT33AY.99.20.000276
ORF1ab/nsp3496A496delGCG---33B.10.000027
ORF1ab/nsp3496A496AgcGgcA23B.1.1.2910.001485
ORF1ab/nsp3496A496AgcGgcT13B.1.1.2910.000742
ORF1ab/nsp3496A496AgcGgcT33B.1.1.3150.025424
ORF1ab/nsp3496A496VgCggTg33B.1.1.330.001263
ORF1ab/nsp3496A496VgCggTg33B.1.1.3480.002389
ORF1ab/nsp3496A496VgCggTg33B.1.1.390.001529
ORF1ab/nsp3496A496VgCggTg33B.1.1.4160.002715
ORF1ab/nsp3496A496delGCG---33B.1.1.70.000003
ORF1ab/nsp3496A496AgcGgcT33B.1.1280.001906
ORF1ab/nsp3496A496AgcGgcA23B.1.177.210.000153
ORF1ab/nsp3496A496AgcGgcT13B.1.177.210.000076
ORF1ab/nsp3496A496VgCggTg33B.1.177.40.000633
ORF1ab/nsp3496A496VgCggTg33B.1.177.690.004451
ORF1ab/nsp3496A496VgCggTg33B.1.177.730.001699
ORF1ab/nsp3496A496AgcGgcT23B.1.177.730.001133
ORF1ab/nsp3496A496AgcGgcC13B.1.177.730.000566
ORF1ab/nsp3496A496VgCggTg33B.1.177.770.002179
ORF1ab/nsp3496A496VgCggTg33B.1.177.840.02
ORF1ab/nsp3496A496VgCggTg33B.1.177.870.002183
ORF1ab/nsp3496A496AgcGgcT33B.1.220.003953
ORF1ab/nsp3496A496AgcGgcA23B.1.2210.000142
ORF1ab/nsp3496A496AgcGgcT13B.1.2210.000071
ORF1ab/nsp3496A496VgCggTg33B.1.2340.000396
ORF1ab/nsp3496A496VgCggTg33B.1.258.140.002941
ORF1ab/nsp3496A496VgCggTg33B.1.36.380.004926
ORF1ab/nsp3496A496VgCggTg33B.1.4090.002344
ORF1ab/nsp3496A496AgcGgcT33B.1.416.10.004687
ORF1ab/nsp3496A496AgcGgcT23B.1.438.10.000215
ORF1ab/nsp3496A496AgcGgcC13B.1.438.10.000107
ORF1ab/nsp3496A496VgCggTg33B.1.466.20.001174
ORF1ab/nsp3496A496AgcGgcT33B.1.5760.00272
ORF1ab/nsp3496A496VgCggTg33B.1.6230.001609
ORF1ab/nsp3496A496AgcGgcT33B.1.780.025641
ORF1ab/nsp3496A496SGcgTcg33D.20.000225
ORF1ab/nsp3496A496VgCggTg33P.1.10.000953
ORF1ab/nsp3496A496TGcgAcg33Q.80.000495
ORF1ab/nsp3496A496AgcGgcT33R.10.00027
ORF1ab/nsp3496A496VgCGgTA220.111111
ORF1ab/nsp3496A496GgCggGg120.055556
ORF1ab/nsp3496A496GgCGgGA120.055556
ORF1ab/nsp3496A496VgCggTg22A.10.000564
ORF1ab/nsp3496A496AgcGgcT22A.23.10.001408
ORF1ab/nsp3496A496AgcGgcT22A.280.005291
ORF1ab/nsp3496A496SGcgTcg22AY.1020.000053
ORF1ab/nsp3496A496VgCggTg22AY.1060.00067
ORF1ab/nsp3496A496AgcGgcA12AY.1060.000335
ORF1ab/nsp3496A496AgcGgcT12AY.1060.000335
ORF1ab/nsp3496A496VgCggTg22AY.1130.000285
ORF1ab/nsp3496A496AgcGgcT22AY.160.000759
ORF1ab/nsp3496A496TGcgAcg22AY.200.000078
ORF1ab/nsp3496A496EgCggAg22AY.250.000012
ORF1ab/nsp3496A496SGcgTcg22AY.250.000012
ORF1ab/nsp3496A496AgcGgcA12AY.320.000532
ORF1ab/nsp3496A496AgcGgcT12AY.320.000532
ORF1ab/nsp3496A496VgCggTg22AY.340.000194
ORF1ab/nsp3496A496TGcgAcg22AY.340.000194
ORF1ab/nsp3496A496AgcGgcT22AY.34.10.00102
ORF1ab/nsp3496A496VgCggTg22AY.370.000632
ORF1ab/nsp3496A496EgCggAg22AY.430.000009
ORF1ab/nsp3496A496TGcgAcg22AY.450.000243
ORF1ab/nsp3496A496VgCggTg22AY.450.000243
ORF1ab/nsp3496A496VgCggTg22AY.46.40.000329
ORF1ab/nsp3496A496AgcGgcT12AY.46.60.000072
ORF1ab/nsp3496A496AgcGgcA12AY.46.60.000072
ORF1ab/nsp3496A496AgcGgcA22AY.5.30.000675
ORF1ab/nsp3496A496AgcGgcT22AY.640.00119
ORF1ab/nsp3496A496AgcGgcT12AY.650.000533
ORF1ab/nsp3496A496AgcGgcC12AY.650.000533
ORF1ab/nsp3496A496AgcGgcT12AY.680.000274
ORF1ab/nsp3496A496AgcGgcC12AY.680.000274
ORF1ab/nsp3496A496AgcGgcT22AY.7.20.001119
ORF1ab/nsp3496A496TGcgAcg22AY.770.002255
ORF1ab/nsp3496A496VgCggTg22AY.770.002255
ORF1ab/nsp3496A496AgcGgcT22AY.780.003082
ORF1ab/nsp3496A496AgcGgcT22AY.90.000135
ORF1ab/nsp3496A496VgCggTg22AY.90.000135
ORF1ab/nsp3496A496VgCggTg22AY.920.000575
ORF1ab/nsp3496A496VgCggTg22AY.940.000885
ORF1ab/nsp3496A496VgCggTg22AY.98.10.000097
ORF1ab/nsp3496A496VgCggTg22B0.000256
ORF1ab/nsp3496A496AgcGgcT22B.1.1.1170.019417
ORF1ab/nsp3496A496AgcGgcT22B.1.1.1280.014184
ORF1ab/nsp3496A496AgcGgcT22B.1.1.1890.003026
ORF1ab/nsp3496A496TGcgAcg22B.1.1.2100.011429
ORF1ab/nsp3496A496TGcgAcg22B.1.1.2160.001781
ORF1ab/nsp3496A496VgCggTg22B.1.1.2200.003717
ORF1ab/nsp3496A496AgcGgcT22B.1.1.250.001137
ORF1ab/nsp3496A496VgCggTg22B.1.1.280.000622
ORF1ab/nsp3496A496VgCggTg22B.1.1.3110.000716
ORF1ab/nsp3496A496VgCggTg22B.1.1.3370.007194
ORF1ab/nsp3496A496AgcGgcA22B.1.1.3480.001592
ORF1ab/nsp3496A496VgCggTg22B.1.1.3560.017094
ORF1ab/nsp3496A496AgcGgcT22B.1.1.3690.000892
ORF1ab/nsp3496A496VgCggTg22B.1.1.4320.002532
ORF1ab/nsp3496A496TGcgAcg22B.1.1.4620.017241
ORF1ab/nsp3496A496VgCggTg22B.1.1.5170.013605
ORF1ab/nsp3496A496VgCggTg22B.1.1.5280.009615
ORF1ab/nsp3496A496del1gcGgc-12B.1.1.70.000001
ORF1ab/nsp3496A496del1Gcg-cg12B.1.1.70.000001
ORF1ab/nsp3496A496VgCggTg22B.1.1170.025
ORF1ab/nsp3496A496TGcgAcg22B.1.1770.000026
ORF1ab/nsp3496A496VgCggTg22B.1.177.120.000303
ORF1ab/nsp3496A496VgCggTg22B.1.177.320.002699
ORF1ab/nsp3496A496VgCggTg22B.1.177.440.001038
ORF1ab/nsp3496A496AgcGgcT22B.1.177.440.001038
ORF1ab/nsp3496A496VgCggTg22B.1.177.540.001213
ORF1ab/nsp3496A496AgcGgcT22B.1.177.620.002384
ORF1ab/nsp3496A496VgCggTg22B.1.177.810.000379
ORF1ab/nsp3496A496VgCggTg22B.1.177.820.000955
ORF1ab/nsp3496A496AgcGgcA22B.1.177.860.000367
ORF1ab/nsp3496A496AgcGgcT22B.1.2140.007326
ORF1ab/nsp3496A496AgcGgcT22B.1.2320.001075
ORF1ab/nsp3496A496AgcGgcT22B.1.258.40.006897
ORF1ab/nsp3496A496AgcGgcA22B.1.2730.025974
ORF1ab/nsp3496A496VgCggTg22B.1.3110.000549
ORF1ab/nsp3496A496VgCggTg22B.1.3490.00143
ORF1ab/nsp3496A496VgCggTg22B.1.36.220.002415
ORF1ab/nsp3496A496AgcGgcT22B.1.36.290.001035
ORF1ab/nsp3496A496SGcgTcg22B.1.4270.000101
ORF1ab/nsp3496A496AgcGgcT22B.1.4660.046512
ORF1ab/nsp3496A496AgcGgcA22B.1.5050.008772
ORF1ab/nsp3496A496AgcGgcA12B.1.5090.000866
ORF1ab/nsp3496A496AgcGgcT12B.1.5090.000866
ORF1ab/nsp3496A496PGcgCcg22B.1.5250.000226
ORF1ab/nsp3496A496TGcgAcg22B.1.5260.000047
ORF1ab/nsp3496A496AgcGgcA22B.1.5370.04
ORF1ab/nsp3496A496AgcGgcT22B.1.5460.007407
ORF1ab/nsp3496A496VgCggTg22B.1.5610.000794
ORF1ab/nsp3496A496TGcgAcg22B.1.5960.000174
ORF1ab/nsp3496A496VgCggTg22B.1.6090.000959
ORF1ab/nsp3496A496AgcGgcC12B.1.6090.000479
ORF1ab/nsp3496A496AgcGgcT12B.1.6090.000479
ORF1ab/nsp3496A496AgcGgcT22B.1.6210.000177
ORF1ab/nsp3496A496AgcGgcT12B.1.6370.000073
ORF1ab/nsp3496A496AgcGgcA12B.1.6370.000073
ORF1ab/nsp3496A496AgcGgcT22B.1.80.003945
ORF1ab/nsp3496A496AgcGgcA22B.30.001661
ORF1ab/nsp3496A496VgCggTg22B.350.015625
ORF1ab/nsp3496A496VgCggTg22C.270.037037
ORF1ab/nsp3496A496AgcGgcA22C.300.003454
ORF1ab/nsp3496A496AgcGgcT22N.50.003534
ORF1ab/nsp3496A496AgcGgcT22P.1.20.002312
ORF1ab/nsp3496A496VgCggTg22P.1.20.002312
ORF1ab/nsp3496A496AgcGgcT12P.1.70.000319
ORF1ab/nsp3496A496AgcGgcA12P.1.70.000319
ORF1ab/nsp3496A496VgCggTg11A0.000387
ORF1ab/nsp3496A496AgcGgcA11A0.000387
ORF1ab/nsp3496A496VgCggTg11A.2.50.000499
ORF1ab/nsp3496A496AgcGgcA11A.2.5.20.001572
ORF1ab/nsp3496A496TGcgAcg11A.210.00277
ORF1ab/nsp3496A496VgCggTg11A.210.00277
ORF1ab/nsp3496A496del2GCG--A11All0
ORF1ab/nsp3496A496KGCgAAg11All0
ORF1ab/nsp3496A496MGCgATg11All0
ORF1ab/nsp3496A496AgcGgcT11AU.30.00211
ORF1ab/nsp3496A496VgCggTg11AW.10.003049
ORF1ab/nsp3496A496AgcGgcT11AY.100.00053
ORF1ab/nsp3496A496delGCG---11AY.1030.000006
ORF1ab/nsp3496A496AgcGgcT11AY.1050.000643
ORF1ab/nsp3496A496AgcGgcA11AY.1070.000466
ORF1ab/nsp3496A496VgCggTg11AY.1070.000466
ORF1ab/nsp3496A496SGcgTcg11AY.1180.000063
ORF1ab/nsp3496A496EgCggAg11AY.1190.000035
ORF1ab/nsp3496A496TGcgAcg11AY.1190.000035
ORF1ab/nsp3496A496AgcGgcT11AY.120.000316
ORF1ab/nsp3496A496SGcgTcg11AY.1200.000037
ORF1ab/nsp3496A496TGcgAcg11AY.1200.000037
ORF1ab/nsp3496A496AgcGgcT11AY.120.10.000321
ORF1ab/nsp3496A496VgCggTg11AY.1210.000135
ORF1ab/nsp3496A496VgCggTg11AY.140.000088
ORF1ab/nsp3496A496SGcgTcg11AY.160.00038
ORF1ab/nsp3496A496VgCggTg11AY.16.10.00047
ORF1ab/nsp3496A496AgcGgcT11AY.16.10.00047
ORF1ab/nsp3496A496AgcGgcT11AY.190.00114
ORF1ab/nsp3496A496SGcgTcg11AY.200.000039
ORF1ab/nsp3496A496AgcGgcT11AY.210.001898
ORF1ab/nsp3496A496AgcGgcT11AY.240.000431
ORF1ab/nsp3496A496delGCG---11AY.250.000006
ORF1ab/nsp3496A496SGcgTcg11AY.290.000016
ORF1ab/nsp3496A496VgCggTg11AY.320.000532
ORF1ab/nsp3496A496AgcGgcA11AY.370.000316
ORF1ab/nsp3496A496SGcgTcg11AY.390.000025
ORF1ab/nsp3496A496SGcgTcg11AY.39.10.00004
ORF1ab/nsp3496A496VgCggTg11AY.39.20.001541
ORF1ab/nsp3496A496EgCggAg11AY.40.000002
ORF1ab/nsp3496A496AgcGgcT11AY.4.40.000409
ORF1ab/nsp3496A496delGCG---11AY.4.50.000107
ORF1ab/nsp3496A496AgcGgcA11AY.400.000964
ORF1ab/nsp3496A496TGcgAcg11AY.400.000964
ORF1ab/nsp3496A496AgcGgcT11AY.410.000294
ORF1ab/nsp3496A496del1gcGgc-11AY.440.000006
ORF1ab/nsp3496A496KGCgAAg11AY.440.000006
ORF1ab/nsp3496A496VgCggTg11AY.460.000104
ORF1ab/nsp3496A496TGcgAcg11AY.46.20.000635
ORF1ab/nsp3496A496SGcgTcg11AY.46.20.000635
ORF1ab/nsp3496A496AgcGgcA11AY.46.30.000934
ORF1ab/nsp3496A496VgCggTg11AY.46.50.000198
ORF1ab/nsp3496A496VgCggTg11AY.5.40.000277
ORF1ab/nsp3496A496VgCggTg11AY.540.000095
ORF1ab/nsp3496A496VgCggTg11AY.560.001605
ORF1ab/nsp3496A496VgCggTg11AY.590.00053
ORF1ab/nsp3496A496AgcGgcT11AY.620.000436
ORF1ab/nsp3496A496VgCggTg11AY.680.000274
ORF1ab/nsp3496A496SGcgTcg11AY.680.000274
ORF1ab/nsp3496A496AgcGgcT11AY.7.10.000113
ORF1ab/nsp3496A496VgCggTg11AY.7.10.000113
ORF1ab/nsp3496A496AgcGgcT11AY.710.000475
ORF1ab/nsp3496A496VgCggTg11AY.740.000116
ORF1ab/nsp3496A496TGcgAcg11AY.740.000116
ORF1ab/nsp3496A496AgcGgcA11AY.770.001127
ORF1ab/nsp3496A496AgcGgcA11AY.840.000437
ORF1ab/nsp3496A496SGcgTcg11AY.9.20.000037
ORF1ab/nsp3496A496TGcgAcg11AY.900.000684
ORF1ab/nsp3496A496AgcGgcT11AY.920.000287
ORF1ab/nsp3496A496AgcGgcT11AY.930.000273
ORF1ab/nsp3496A496AgcGgcT11AY.940.000443
ORF1ab/nsp3496A496AgcGgcT11AY.970.001701
ORF1ab/nsp3496A496VgCggTg11AY.980.000079
ORF1ab/nsp3496A496delGCG---11AY.990.001049
ORF1ab/nsp3496A496VgCggTg11AY.990.001049
ORF1ab/nsp3496A496GgCggGg11AZ.10.000867
ORF1ab/nsp3496A496del2GCG--A11B0.000128
ORF1ab/nsp3496A496PGcgCcg11B.10.000009
ORF1ab/nsp3496A496EgCggAg11B.1.10.000018
ORF1ab/nsp3496A496del1GcGAc-11B.1.10.000018
ORF1ab/nsp3496A496TGcgAcg11B.1.1.1290.009174
ORF1ab/nsp3496A496AgcGgcA11B.1.1.1480.008772
ORF1ab/nsp3496A496VgCggTg11B.1.1.1610.003534
ORF1ab/nsp3496A496AgcGgcA11B.1.1.1640.005155
ORF1ab/nsp3496A496AgcGgcT11B.1.1.1700.001247
ORF1ab/nsp3496A496TGcgAcg11B.1.1.1710.003676
ORF1ab/nsp3496A496AgcGgcT11B.1.1.1920.002309
ORF1ab/nsp3496A496VgCggTg11B.1.1.2000.007463
ORF1ab/nsp3496A496TGcgAcg11B.1.1.2140.000055
ORF1ab/nsp3496A496AgcGgcT11B.1.1.2160.00089
ORF1ab/nsp3496A496delGCG---11B.1.1.2160.00089
ORF1ab/nsp3496A496VgCggTg11B.1.1.2160.00089
ORF1ab/nsp3496A496VgCggTg11B.1.1.2220.000204
ORF1ab/nsp3496A496AgcGgcT11B.1.1.2410.00207
ORF1ab/nsp3496A496AgcGgcT11B.1.1.2440.015385
ORF1ab/nsp3496A496VgCggTg11B.1.1.250.000569
ORF1ab/nsp3496A496PGcgCcg11B.1.1.250.000569
ORF1ab/nsp3496A496VgCggTg11B.1.1.2570.009709
ORF1ab/nsp3496A496EgCggAg11B.1.1.280.000311
ORF1ab/nsp3496A496AgcGgcT11B.1.1.2840.000107
ORF1ab/nsp3496A496VgCggTg11B.1.1.2840.000107
ORF1ab/nsp3496A496VgCggTg11B.1.1.3060.000438
ORF1ab/nsp3496A496AgcGgcT11B.1.1.3090.005848
ORF1ab/nsp3496A496AgcGgcT11B.1.1.3110.000358
ORF1ab/nsp3496A496VgCggTg11B.1.1.3170.000412
ORF1ab/nsp3496A496VgCggTg11B.1.1.3180.000302
ORF1ab/nsp3496A496AgcGgcA11B.1.1.3260.001761
ORF1ab/nsp3496A496AgcGgcA11B.1.1.330.000421
ORF1ab/nsp3496A496VgCggTg11B.1.1.3360.016667
ORF1ab/nsp3496A496TGcgAcg11B.1.1.3370.003597
ORF1ab/nsp3496A496AgcGgcT11B.1.1.3500.04
ORF1ab/nsp3496A496VgCggTg11B.1.1.370.000193
ORF1ab/nsp3496A496VgCggTg11B.1.1.3720.000689
ORF1ab/nsp3496A496SGcgTcg11B.1.1.3850.004464
ORF1ab/nsp3496A496AgcGgcT11B.1.1.3980.003226
ORF1ab/nsp3496A496AgcGgcT11B.1.1.4090.002833
ORF1ab/nsp3496A496VgCggTg11B.1.1.4130.006897
ORF1ab/nsp3496A496AgcGgcT11B.1.1.4160.000905
ORF1ab/nsp3496A496VgCggTg11B.1.1.4170.002703
ORF1ab/nsp3496A496SGcgTcg11B.1.1.4280.009434
ORF1ab/nsp3496A496VgCggTg11B.1.1.440.00241
ORF1ab/nsp3496A496VgCggTg11B.1.1.4520.111111
ORF1ab/nsp3496A496AgcGgcT11B.1.1.4640.001473
ORF1ab/nsp3496A496AgcGgcA11B.1.1.470.005348
ORF1ab/nsp3496A496AgcGgcA11B.1.1.4860.001577
ORF1ab/nsp3496A496delGCG---11B.1.1.5190.00004
ORF1ab/nsp3496A496AgcGgcA11B.1.1.610.008772
ORF1ab/nsp3496A496PGcgCcg11B.1.1.70.000001
ORF1ab/nsp3496A496MGCgATg11B.1.1.70.000001
ORF1ab/nsp3496A496TGcgAcg11B.1.1270.002198
ORF1ab/nsp3496A496AgcGgcT11B.1.1570.002985
ORF1ab/nsp3496A496VgCggTg11B.1.160.330.004425
ORF1ab/nsp3496A496AgcGgcA11B.1.160.70.002079
ORF1ab/nsp3496A496SGcgTcg11B.1.1770.000013
ORF1ab/nsp3496A496PGcgCcg11B.1.1770.000013
ORF1ab/nsp3496A496VgCggTg11B.1.177.110.001698
ORF1ab/nsp3496A496VgCggTg11B.1.177.170.000821
ORF1ab/nsp3496A496AgcGgcT11B.1.177.180.00116
ORF1ab/nsp3496A496SGcgTcg11B.1.177.210.000076
ORF1ab/nsp3496A496AgcGgcT11B.1.177.230.003236
ORF1ab/nsp3496A496AgcGgcT11B.1.177.30.007634
ORF1ab/nsp3496A496VgCggTg11B.1.177.330.001645
ORF1ab/nsp3496A496AgcGgcA11B.1.177.330.001645
ORF1ab/nsp3496A496AgcGgcA11B.1.177.40.000211
ORF1ab/nsp3496A496VgCggTg11B.1.177.480.003125
ORF1ab/nsp3496A496TGcgAcg11B.1.177.540.000606
ORF1ab/nsp3496A496VgCggTg11B.1.177.570.000281
ORF1ab/nsp3496A496VgCggTg11B.1.177.60.000977
ORF1ab/nsp3496A496AgcGgcA11B.1.177.690.001484
ORF1ab/nsp3496A496delGCG---11B.1.177.860.000183
ORF1ab/nsp3496A496AgcGgcT11B.1.177.90.001332
ORF1ab/nsp3496A496AgcGgcA11B.1.2060.000816
ORF1ab/nsp3496A496VgCggTg11B.1.2060.000816
ORF1ab/nsp3496A496SGcgTcg11B.1.221.10.002907
ORF1ab/nsp3496A496VgCggTg11B.1.230.006061
ORF1ab/nsp3496A496VgCggTg11B.1.2360.002053
ORF1ab/nsp3496A496AgcGgcT11B.1.2400.000216
ORF1ab/nsp3496A496PGcgCcg11B.1.2430.00007
ORF1ab/nsp3496A496SGcgTcg11B.1.2580.000067
ORF1ab/nsp3496A496TGcgAcg11B.1.2580.000067
ORF1ab/nsp3496A496delGCG---11B.1.258.160.001637
ORF1ab/nsp3496A496AgcGgcT11B.1.258.170.000104
ORF1ab/nsp3496A496AgcGgcA11B.1.258.70.001912
ORF1ab/nsp3496A496AgcGgcT11B.1.2600.003344
ORF1ab/nsp3496A496VgCggTg11B.1.2640.012346
ORF1ab/nsp3496A496AgcGgcT11B.1.2650.001271
ORF1ab/nsp3496A496VgCggTg11B.1.2980.002114
ORF1ab/nsp3496A496VgCggTg11B.1.3020.013333
ORF1ab/nsp3496A496AgcGgcT11B.1.3490.000715
ORF1ab/nsp3496A496GgCggGg11B.1.3510.00003
ORF1ab/nsp3496A496VgCggTg11B.1.351.20.000303
ORF1ab/nsp3496A496SGcgTcg11B.1.351.50.0006
ORF1ab/nsp3496A496delGCG---11B.1.360.000146
ORF1ab/nsp3496A496AgcGgcT11B.1.36.10.00114
ORF1ab/nsp3496A496AgcGgcT11B.1.36.170.000494
ORF1ab/nsp3496A496AgcGgcT11B.1.36.180.00042
ORF1ab/nsp3496A496VgCggTg11B.1.36.180.00042
ORF1ab/nsp3496A496VgCggTg11B.1.36.310.001751
ORF1ab/nsp3496A496AgcGgcA11B.1.36.360.000602
ORF1ab/nsp3496A496VgCggTg11B.1.36.360.000602
ORF1ab/nsp3496A496AgcGgcA11B.1.36.80.001
ORF1ab/nsp3496A496VgCggTg11B.1.36.80.001
ORF1ab/nsp3496A496EgCggAg11B.1.36.80.001
ORF1ab/nsp3496A496EgCggAg11B.1.3780.006849
ORF1ab/nsp3496A496TGcgAcg11B.1.3830.009009
ORF1ab/nsp3496A496AgcGgcA11B.1.3960.000706
ORF1ab/nsp3496A496VgCggTg11B.1.400.019608
ORF1ab/nsp3496A496AgcGgcA11B.1.4000.000429
ORF1ab/nsp3496A496AgcGgcT11B.1.4090.000781
ORF1ab/nsp3496A496AgcGgcT11B.1.4160.001269
ORF1ab/nsp3496A496VgCggTg11B.1.4280.00102
ORF1ab/nsp3496A496GgCggGg11B.1.4290.000024
ORF1ab/nsp3496A496SGcgTcg11B.1.438.10.000107
ORF1ab/nsp3496A496TGcgAcg11B.1.438.10.000107
ORF1ab/nsp3496A496VgCggTg11B.1.438.10.000107
ORF1ab/nsp3496A496AgcGgcA11B.1.4530.003236
ORF1ab/nsp3496A496AgcGgcT11B.1.4980.020408
ORF1ab/nsp3496A496EgCggAg11B.1.5250.000113
ORF1ab/nsp3496A496AgcGgcA11B.1.5250.000113
ORF1ab/nsp3496A496PGcgCcg11B.1.5260.000024
ORF1ab/nsp3496A496SGcgTcg11B.1.5260.000024
ORF1ab/nsp3496A496AgcGgcA11B.1.5720.025
ORF1ab/nsp3496A496AgcGgcA11B.1.5740.002151
ORF1ab/nsp3496A496VgCggTg11B.1.5750.000303
ORF1ab/nsp3496A496SGcgTcg11B.1.5820.000491
ORF1ab/nsp3496A496AgcGgcA11B.1.5950.000261
ORF1ab/nsp3496A496VgCggTg11B.1.5960.000087
ORF1ab/nsp3496A496VgCggTg11B.1.596.10.009346
ORF1ab/nsp3496A496AgcGgcA11B.1.6010.030303
ORF1ab/nsp3496A496VgCggTg11B.1.6050.005952
ORF1ab/nsp3496A496AgcGgcT11B.1.617.10.000129
ORF1ab/nsp3496A496VgCggTg11B.1.617.10.000129
ORF1ab/nsp3496A496del1gcGgc-11B.1.617.20.000004
ORF1ab/nsp3496A496delGCG---11B.1.617.20.000004
ORF1ab/nsp3496A496PGcgCcg11B.1.617.20.000004
ORF1ab/nsp3496A496AgcGgcT11B.1.6190.000871
ORF1ab/nsp3496A496VgCggTg11B.1.6210.000089
ORF1ab/nsp3496A496TGcgAcg11B.1.621.10.000506
ORF1ab/nsp3496A496TGcgAcg11B.1.6270.00202
ORF1ab/nsp3496A496SGcgTcg11B.1.930.000934
ORF1ab/nsp3496A496TGcgAcg11B.4.70.010101
ORF1ab/nsp3496A496AgcGgcT11B.400.000364
ORF1ab/nsp3496A496delGCG---11B.570.015152
ORF1ab/nsp3496A496AgcGgcT11B.60.00091
ORF1ab/nsp3496A496VgCggTg11B.60.00091
ORF1ab/nsp3496A496AgcGgcA11C.360.000911
ORF1ab/nsp3496A496AgcGgcT11C.36.30.000567
ORF1ab/nsp3496A496VgCggTg11C.36.3.10.002717
ORF1ab/nsp3496A496TGcgAcg11D.20.000075
ORF1ab/nsp3496A496PGcgCcg11D.30.005917
ORF1ab/nsp3496A496VgCggTg11N.60.007092
ORF1ab/nsp3496A496delGCG---11P.10.000016
ORF1ab/nsp3496A496TGcgAcg11P.1.10.000318
ORF1ab/nsp3496A496AgcGgcA11P.1.100.000269
ORF1ab/nsp3496A496AgcGgcA11P.1.120.000484
ORF1ab/nsp3496A496TGcgAcg11P.1.140.000048
ORF1ab/nsp3496A496VgCggTg11P.1.150.000232
ORF1ab/nsp3496A496AgcGgcT11P.1.150.000232
ORF1ab/nsp3496A496EgCggAg11P.1.150.000232
ORF1ab/nsp3496A496AgcGgcT11P.1.160.000374
ORF1ab/nsp3496A496VgCggTg11P.1.160.000374
ORF1ab/nsp3496A496TGcgAcg11P.1.170.000162
ORF1ab/nsp3496A496VgCggTg11P.1.60.001946
ORF1ab/nsp3496A496TGcgAcg11P.20.000187
ORF1ab/nsp3496A496SGcgTcg11P.20.000187
ORF1ab/nsp3496A496VgCggTg11P.20.000187
ORF1ab/nsp3496A496AgcGgcT11Q.10.000126
ORF1ab/nsp3496A496VgCggTg11Q.30.000145
ORF1ab/nsp3496A496VgCggTg11Q.50.016949
ORF1ab/nsp3496A496AgcGgcT11Q.80.000165
ORF1ab/nsp3496A496delGCG---11R.10.00009
ORF1ab/nsp3496A496delGCG---11U.30.003861