CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF1ab/nsp3 : CodonNum = 481

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF1ab/nsp3481V481VV1299VsyngtGgtT462943840.9470734160-4162
ORF1ab/nsp3481V481VV1299VsyngtGgtA46292130.04601434160-4162
ORF1ab/nsp3481V481VV1299VsyngtGgtC4629320.006912944160-4162
ORF1ab/nsp3481V481LV1299LnonsynGtgTtg9319220.9903334160-4162
ORF1ab/nsp3481V481LV1299LnonsynGtgCtg93190.009667024160-4162
ORF1ab/nsp3481V481AV1299AnonsyngTggCg34320.9411764160-4162
ORF1ab/nsp3481V481AV1299AnonsyngTGgCA3410.02941184160-4162
ORF1ab/nsp3481V481AV1299AnonsyngTGgCT3410.02941184160-4162
ORF1ab/nsp3481V481del1V1299del1delGtg-tg17120.7058824160-4162
ORF1ab/nsp3481V481del1V1299del1delgtGgt-1750.2941184160-4162
ORF1ab/nsp3481V481delV1299deldelGTG---161614160-4162
ORF1ab/nsp3481V481SV1299SnonsynGTGTCT650.8333334160-4162
ORF1ab/nsp3481V481SV1299SnonsynGTGTCA610.1666674160-4162
ORF1ab/nsp3481V481MV1299MnonsynGtgAtg5514160-4162
ORF1ab/nsp3481V481EV1299EnonsyngTggAg540.84160-4162
ORF1ab/nsp3481V481EV1299EnonsyngTGgAA510.24160-4162
ORF1ab/nsp3481V481IV1299InonsynGtGAtT420.54160-4162
ORF1ab/nsp3481V481IV1299InonsynGtGAtA420.54160-4162
ORF1ab/nsp3481V481TV1299TnonsynGTGACA310.3333334160-4162
ORF1ab/nsp3481V481TV1299TnonsynGTgACg310.3333334160-4162
ORF1ab/nsp3481V481TV1299TnonsynGTGACT310.3333334160-4162
ORF1ab/nsp3481V481GV1299GnonsyngTggGg2214160-4162
ORF1ab/nsp3481V481KV1299KnonsynGTgAAg210.54160-4162
ORF1ab/nsp3481V481KV1299KnonsynGTGAAA210.54160-4162
ORF1ab/nsp3481V481del2V1299del2delGTg--g1114160-4162
ORF1ab/nsp3481V481DV1299DnonsyngTGgAT1114160-4162
ORF1ab/nsp3481V481NV1299NnonsynGTGAAT1114160-4162
ORF1ab/nsp3481V481CV1299CnonsynGTGTGT1114160-4162
ORF1ab/nsp3481V481XV1299XnonsynGTGTGA1114160-4162

Details of the mutation no within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF1ab/nsp3481V481VgtGgtT43844629All0.000838
ORF1ab/nsp3481V481VgtGgtA2134629All0.000041
ORF1ab/nsp3481V481VgtGgtC324629All0.000006
ORF1ab/nsp3481V481VgtGgtT937937AY.600.878987
ORF1ab/nsp3481V481LGtgTtg922931All0.000176
ORF1ab/nsp3481V481LGtgCtg9931All0.000002
ORF1ab/nsp3481V481VgtGgtT499523AY.430.002211
ORF1ab/nsp3481V481VgtGgtC16523AY.430.000071
ORF1ab/nsp3481V481VgtGgtA8523AY.430.000035
ORF1ab/nsp3481V481VgtGgtT454454B.1.20.003998
ORF1ab/nsp3481V481VgtGgtT373409B.1.617.20.001404
ORF1ab/nsp3481V481VgtGgtA35409B.1.617.20.000132
ORF1ab/nsp3481V481VgtGgtC1409B.1.617.20.000004
ORF1ab/nsp3481V481VgtGgtT305363B.1.1.70.000273
ORF1ab/nsp3481V481VgtGgtA56363B.1.1.70.00005
ORF1ab/nsp3481V481VgtGgtC2363B.1.1.70.000002
ORF1ab/nsp3481V481VgtGgtT229243AY.40.000356
ORF1ab/nsp3481V481VgtGgtA11243AY.40.000017
ORF1ab/nsp3481V481VgtGgtC3243AY.40.000005
ORF1ab/nsp3481V481VgtGgtT239239AY.3.10.020377
ORF1ab/nsp3481V481LGtgTtg162162AY.40.000252
ORF1ab/nsp3481V481VgtGgtT158159AY.610.016555
ORF1ab/nsp3481V481VgtGgtA1159AY.610.000105
ORF1ab/nsp3481V481LGtgTtg152152B.1.1.70.000136
ORF1ab/nsp3481V481LGtgTtg8080AY.250.000481
ORF1ab/nsp3481V481VgtGgtT7074B.10.000641
ORF1ab/nsp3481V481VgtGgtA474B.10.000037
ORF1ab/nsp3481V481VgtGgtT7171B.1.5210.353234
ORF1ab/nsp3481V481LGtgTtg6060B.1.617.20.000226
ORF1ab/nsp3481V481VgtGgtT5259AY.1030.000323
ORF1ab/nsp3481V481VgtGgtC459AY.1030.000025
ORF1ab/nsp3481V481VgtGgtA359AY.1030.000019
ORF1ab/nsp3481V481VgtGgtT4758AY.440.000286
ORF1ab/nsp3481V481VgtGgtA1158AY.440.000067
ORF1ab/nsp3481V481VgtGgtT5555B.1.2430.003827
ORF1ab/nsp3481V481VgtGgtT4849AY.1020.001273
ORF1ab/nsp3481V481VgtGgtA149AY.1020.000027
ORF1ab/nsp3481V481VgtGgtT4849AY.9.20.001763
ORF1ab/nsp3481V481VgtGgtA149AY.9.20.000037
ORF1ab/nsp3481V481VgtGgtT4748B.1.4270.002373
ORF1ab/nsp3481V481VgtGgtA148B.1.4270.00005
ORF1ab/nsp3481V481VgtGgtT4545AY.75.10.008114
ORF1ab/nsp3481V481LGtgTtg4343B.1.4290.001012
ORF1ab/nsp3481V481AgTggCg3234All0.000006
ORF1ab/nsp3481V481AgTGgCA134All0
ORF1ab/nsp3481V481AgTGgCT134All0
ORF1ab/nsp3481V481VgtGgtT3434B.1.1.2160.030276
ORF1ab/nsp3481V481VgtGgtT2732P.10.000425
ORF1ab/nsp3481V481VgtGgtA532P.10.000079
ORF1ab/nsp3481V481VgtGgtT3232R.10.00288
ORF1ab/nsp3481V481VgtGgtT2829AY.30.000278
ORF1ab/nsp3481V481VgtGgtA129AY.30.00001
ORF1ab/nsp3481V481VgtGgtT2829AY.390.000692
ORF1ab/nsp3481V481VgtGgtC129AY.390.000025
ORF1ab/nsp3481V481LGtgTtg2828B.1.1770.000369
ORF1ab/nsp3481V481VgtGgtT2727B.1.177.40.005699
ORF1ab/nsp3481V481LGtgTtg2525AY.200.000972
ORF1ab/nsp3481V481VgtGgtT2425AY.330.001603
ORF1ab/nsp3481V481VgtGgtC125AY.330.000067
ORF1ab/nsp3481V481LGtgTtg2323AY.1000.001058
ORF1ab/nsp3481V481VgtGgtT2323B.1.1.2190.115
ORF1ab/nsp3481V481VgtGgtT2222AY.90.001487
ORF1ab/nsp3481V481LGtgTtg2121AY.90.001419
ORF1ab/nsp3481V481VgtGgtT2020AJ.10.909091
ORF1ab/nsp3481V481LGtgTtg1920AY.46.60.001372
ORF1ab/nsp3481V481LGtgCtg120AY.46.60.000072
ORF1ab/nsp3481V481VgtGgtA1919AY.1130.002705
ORF1ab/nsp3481V481VgtGgtT1519AY.250.00009
ORF1ab/nsp3481V481VgtGgtA419AY.250.000024
ORF1ab/nsp3481V481VgtGgtT1319AY.260.000368
ORF1ab/nsp3481V481VgtGgtA619AY.260.00017
ORF1ab/nsp3481V481LGtgTtg1919AY.390.00047
ORF1ab/nsp3481V481del1Gtg-tg1217All0.000002
ORF1ab/nsp3481V481del1gtGgt-517All0.000001
ORF1ab/nsp3481V481delGTG---1616All0.000003
ORF1ab/nsp3481V481LGtgTtg1616AY.440.000097
ORF1ab/nsp3481V481VgtGgtT1415AY.980.001106
ORF1ab/nsp3481V481VgtGgtA115AY.980.000079
ORF1ab/nsp3481V481LGtgTtg1515P.10.000236
ORF1ab/nsp3481V481LGtgTtg1313AY.39.10.000515
ORF1ab/nsp3481V481LGtgTtg1313AY.430.000058
ORF1ab/nsp3481V481VgtGgtT1313AY.470.000404
ORF1ab/nsp3481V481LGtgTtg1313AY.930.00355
ORF1ab/nsp3481V481LGtgTtg1313B.1.360.001897
ORF1ab/nsp3481V481VgtGgtT1112AY.1190.000388
ORF1ab/nsp3481V481VgtGgtA112AY.1190.000035
ORF1ab/nsp3481V481VgtGgtT912AY.200.00035
ORF1ab/nsp3481V481VgtGgtA212AY.200.000078
ORF1ab/nsp3481V481VgtGgtC112AY.200.000039
ORF1ab/nsp3481V481LGtgTtg1112B.10.000101
ORF1ab/nsp3481V481LGtgCtg112B.10.000009
ORF1ab/nsp3481V481VgtGgtT1212B.1.1.3710.125
ORF1ab/nsp3481V481VgtGgtT1111AY.4.2.10.001639
ORF1ab/nsp3481V481VgtGgtT911B.1.10.000163
ORF1ab/nsp3481V481VgtGgtC111B.1.10.000018
ORF1ab/nsp3481V481VgtGgtA111B.1.10.000018
ORF1ab/nsp3481V481VgtGgtT1011B.1.1770.000132
ORF1ab/nsp3481V481VgtGgtA111B.1.1770.000013
ORF1ab/nsp3481V481VgtGgtT1111B.1.230.066667
ORF1ab/nsp3481V481VgtGgtT1111B.1.5750.003337
ORF1ab/nsp3481V481LGtgTtg1010AY.1010.004904
ORF1ab/nsp3481V481LGtgTtg1010AY.1030.000062
ORF1ab/nsp3481V481VgtGgtT1010AY.39.10.000396
ORF1ab/nsp3481V481VgtGgtT1010AY.480.004651
ORF1ab/nsp3481V481VgtGgtT1010AY.550.009174
ORF1ab/nsp3481V481VgtGgtT1010AY.650.00533
ORF1ab/nsp3481V481LGtgTtg1010B.1.10.000181
ORF1ab/nsp3481V481VgtGgtT99AY.750.000504
ORF1ab/nsp3481V481VgtGgtT89B.1.1.5190.000318
ORF1ab/nsp3481V481VgtGgtA19B.1.1.5190.00004
ORF1ab/nsp3481V481LGtgTtg99B.1.20.000079
ORF1ab/nsp3481V481VgtGgtT88AY.130.001288
ORF1ab/nsp3481V481VgtGgtA88AY.360.001186
ORF1ab/nsp3481V481VgtGgtT78AY.46.40.001152
ORF1ab/nsp3481V481VgtGgtA18AY.46.40.000165
ORF1ab/nsp3481V481LGtgTtg88B.1.1.330.003367
ORF1ab/nsp3481V481VgtGgtT88B.1.5770.005498
ORF1ab/nsp3481V481VgtGgtT77AY.16.10.003289
ORF1ab/nsp3481V481VgtGgtA47B.1.1.2220.000816
ORF1ab/nsp3481V481VgtGgtT37B.1.1.2220.000612
ORF1ab/nsp3481V481VgtGgtT77P.20.001306
ORF1ab/nsp3481V481SGTGTCT56All0.000001
ORF1ab/nsp3481V481SGTGTCA16All0
ORF1ab/nsp3481V481LGtgTtg66AY.1020.000159
ORF1ab/nsp3481V481VgtGgtT66AY.420.000241
ORF1ab/nsp3481V481AgTggCg66AY.60.000247
ORF1ab/nsp3481V481VgtGgtT66AY.60.000247
ORF1ab/nsp3481V481LGtgTtg66B.1.2580.000399
ORF1ab/nsp3481V481LGtgCtg56B.1.3690.001426
ORF1ab/nsp3481V481LGtgTtg16B.1.3690.000285
ORF1ab/nsp3481V481VgtGgtT66B.1.4290.000141
ORF1ab/nsp3481V481VgtGgtT66B.1.5690.086957
ORF1ab/nsp3481V481VgtGgtT66B.1.5960.000523
ORF1ab/nsp3481V481VgtGgtT66C.370.000696
ORF1ab/nsp3481V481MGtgAtg55All0.000001
ORF1ab/nsp3481V481EgTggAg45All0.000001
ORF1ab/nsp3481V481EgTGgAA15All0
ORF1ab/nsp3481V481VgtGgtT45AY.1170.000338
ORF1ab/nsp3481V481VgtGgtA15AY.1170.000085
ORF1ab/nsp3481V481LGtgTtg55AY.1200.000186
ORF1ab/nsp3481V481VgtGgtT35AY.230.000209
ORF1ab/nsp3481V481VgtGgtA25AY.230.000139
ORF1ab/nsp3481V481VgtGgtT55AY.240.002155
ORF1ab/nsp3481V481LGtgTtg55AY.330.000334
ORF1ab/nsp3481V481VgtGgtT45AY.50.000083
ORF1ab/nsp3481V481VgtGgtA15AY.50.000021
ORF1ab/nsp3481V481LGtgTtg55AY.980.000395
ORF1ab/nsp3481V481LGtgTtg55B.1.1.370.000964
ORF1ab/nsp3481V481AgTggCg55B.1.1.70.000004
ORF1ab/nsp3481V481VgtGgtT55B.1.5260.000118
ORF1ab/nsp3481V481IGtGAtA24All0
ORF1ab/nsp3481V481IGtGAtT24All0
ORF1ab/nsp3481V481VgtGgtT44AY.1000.000184
ORF1ab/nsp3481V481VgtGgtA34AY.1050.001929
ORF1ab/nsp3481V481VgtGgtT14AY.1050.000643
ORF1ab/nsp3481V481LGtgTtg44AY.30.00004
ORF1ab/nsp3481V481VgtGgtT34AY.46.10.00308
ORF1ab/nsp3481V481VgtGgtA14AY.46.10.001027
ORF1ab/nsp3481V481LGtgTtg34AY.470.000093
ORF1ab/nsp3481V481LGtgCtg14AY.470.000031
ORF1ab/nsp3481V481del1gtGgt-34AY.610.000314
ORF1ab/nsp3481V481del1Gtg-tg14AY.610.000105
ORF1ab/nsp3481V481VgtGgtT44AY.620.001743
ORF1ab/nsp3481V481VgtGgtT44AY.9.10.000335
ORF1ab/nsp3481V481VgtGgtT44AY.98.10.000194
ORF1ab/nsp3481V481LGtgTtg44B.1.1.2070.004728
ORF1ab/nsp3481V481VgtGgtT44B.1.1.5230.00625
ORF1ab/nsp3481V481LGtgTtg44B.1.4700.005618
ORF1ab/nsp3481V481LGtgTtg44B.1.5260.000094
ORF1ab/nsp3481V481AgTGgCT130.055556
ORF1ab/nsp3481V481TGTGACA130.055556
ORF1ab/nsp3481V481TGTGACT130.055556
ORF1ab/nsp3481V481AgTggCg130.055556
ORF1ab/nsp3481V481TGTgACg130.055556
ORF1ab/nsp3481V481AgTGgCA130.055556
ORF1ab/nsp3481V481TGTGACA13All0
ORF1ab/nsp3481V481TGTgACg13All0
ORF1ab/nsp3481V481TGTGACT13All0
ORF1ab/nsp3481V481LGtgTtg33AY.1060.001005
ORF1ab/nsp3481V481LGtgTtg33AY.290.000047
ORF1ab/nsp3481V481LGtgTtg33AY.360.000445
ORF1ab/nsp3481V481LGtgTtg33AY.4.20.000065
ORF1ab/nsp3481V481VgtGgtT23AY.460.000208
ORF1ab/nsp3481V481VgtGgtA13AY.460.000104
ORF1ab/nsp3481V481LGtgTtg33AY.50.000062
ORF1ab/nsp3481V481VgtGgtT33AY.850.001282
ORF1ab/nsp3481V481del1Gtg-tg33B.10.000027
ORF1ab/nsp3481V481delGTG---33B.1.1.70.000003
ORF1ab/nsp3481V481VgtGgtT33B.1.258.170.000312
ORF1ab/nsp3481V481VgtGgtA23B.1.3670.001585
ORF1ab/nsp3481V481VgtGgtT13B.1.3670.000792
ORF1ab/nsp3481V481AgTggCg33B.1.617.20.000011
ORF1ab/nsp3481V481VgtGgtT33B.1.6320.020134
ORF1ab/nsp3481V481VgtGgtT33Q.40.001364
ORF1ab/nsp3481V481IGtGAtT120.055556
ORF1ab/nsp3481V481EgTggAg120.055556
ORF1ab/nsp3481V481KGTgAAg120.055556
ORF1ab/nsp3481V481VgtGgtT120.055556
ORF1ab/nsp3481V481EgTGgAA120.055556
ORF1ab/nsp3481V481VgtGgtA120.055556
ORF1ab/nsp3481V481IGtGAtA120.055556
ORF1ab/nsp3481V481KGTGAAA120.055556
ORF1ab/nsp3481V481GgTggGg22All0
ORF1ab/nsp3481V481KGTGAAA12All0
ORF1ab/nsp3481V481KGTgAAg12All0
ORF1ab/nsp3481V481VgtGgtT22AY.1060.00067
ORF1ab/nsp3481V481VgtGgtT22AY.1110.000366
ORF1ab/nsp3481V481LGtgTtg22AY.1190.000071
ORF1ab/nsp3481V481LGtgTtg22AY.20.000712
ORF1ab/nsp3481V481LGtgTtg22AY.230.000139
ORF1ab/nsp3481V481LGtgTtg22AY.260.000057
ORF1ab/nsp3481V481VgtGgtA12AY.340.000097
ORF1ab/nsp3481V481VgtGgtT12AY.340.000097
ORF1ab/nsp3481V481VgtGgtT22AY.34.10.00102
ORF1ab/nsp3481V481AgTggCg22AY.430.000009
ORF1ab/nsp3481V481SGTGTCT22AY.430.000009
ORF1ab/nsp3481V481delGTG---22AY.430.000009
ORF1ab/nsp3481V481AgTggCg22AY.440.000012
ORF1ab/nsp3481V481VgtGgtT22AY.450.000243
ORF1ab/nsp3481V481LGtgTtg22AY.460.000208
ORF1ab/nsp3481V481VgtGgtT12AY.46.50.000198
ORF1ab/nsp3481V481VgtGgtA12AY.46.50.000198
ORF1ab/nsp3481V481VgtGgtT22AY.5.40.000553
ORF1ab/nsp3481V481VgtGgtT22AY.500.001599
ORF1ab/nsp3481V481VgtGgtT22AY.670.000929
ORF1ab/nsp3481V481VgtGgtT22AY.680.000547
ORF1ab/nsp3481V481VgtGgtT22AY.710.00095
ORF1ab/nsp3481V481VgtGgtT22AY.730.001331
ORF1ab/nsp3481V481LGtgTtg22AY.890.009804
ORF1ab/nsp3481V481LGtgTtg22AY.9.10.000167
ORF1ab/nsp3481V481LGtgTtg22AY.9.20.000073
ORF1ab/nsp3481V481LGtgTtg22AY.910.001461
ORF1ab/nsp3481V481VgtGgtT12AY.930.000273
ORF1ab/nsp3481V481VgtGgtA12AY.930.000273
ORF1ab/nsp3481V481VgtGgtT22AY.950.001522
ORF1ab/nsp3481V481LGtgTtg22AY.98.10.000097
ORF1ab/nsp3481V481VgtGgtT22B0.000256
ORF1ab/nsp3481V481delGTG---22B.10.000018
ORF1ab/nsp3481V481LGtgTtg22B.1.1.2220.000408
ORF1ab/nsp3481V481AgTggCg22B.1.1600.000062
ORF1ab/nsp3481V481AgTggCg22B.1.1770.000026
ORF1ab/nsp3481V481LGtgTtg22B.1.177.40.000422
ORF1ab/nsp3481V481LGtgTtg22B.1.177.810.000379
ORF1ab/nsp3481V481del1Gtg-tg22B.1.20.000018
ORF1ab/nsp3481V481VgtGgtT22B.1.2340.000264
ORF1ab/nsp3481V481VgtGgtT22B.1.258.30.00335
ORF1ab/nsp3481V481VgtGgtT22B.1.3110.000549
ORF1ab/nsp3481V481LGtgTtg22B.1.36.80.002
ORF1ab/nsp3481V481VgtGgtT22B.1.36.80.002
ORF1ab/nsp3481V481VgtGgtC22B.1.3690.00057
ORF1ab/nsp3481V481LGtgTtg22B.1.416.10.003125
ORF1ab/nsp3481V481LGtgTtg22B.1.4220.001625
ORF1ab/nsp3481V481LGtgTtg22B.1.5160.003914
ORF1ab/nsp3481V481VgtGgtT22B.1.5610.000794
ORF1ab/nsp3481V481LGtgTtg22B.1.5610.000794
ORF1ab/nsp3481V481VgtGgtA22B.1.5630.033898
ORF1ab/nsp3481V481LGtgTtg22B.1.5880.00182
ORF1ab/nsp3481V481VgtGgtT22B.1.5950.000522
ORF1ab/nsp3481V481LGtgTtg22B.1.5960.000174
ORF1ab/nsp3481V481VgtGgtT22B.1.617.10.000258
ORF1ab/nsp3481V481VgtGgtT22D.20.00015
ORF1ab/nsp3481V481MGtgAtg110.055556
ORF1ab/nsp3481V481NGTGAAT110.055556
ORF1ab/nsp3481V481DgTGgAT110.055556
ORF1ab/nsp3481V481AgTggCg11A0.000387
ORF1ab/nsp3481V481del1Gtg-tg11A0.000387
ORF1ab/nsp3481V481VgtGgtT11A.2.50.000499
ORF1ab/nsp3481V481VgtGgtT11A.23.10.000704
ORF1ab/nsp3481V481VgtGgtT11A.270.001656
ORF1ab/nsp3481V481AgTggCg11A.270.001656
ORF1ab/nsp3481V481LGtgTtg11A.90.045455
ORF1ab/nsp3481V481VgtGgtT11AD.20.000219
ORF1ab/nsp3481V481del2GTg--g11All0
ORF1ab/nsp3481V481XGTGTGA11All0
ORF1ab/nsp3481V481DgTGgAT11All0
ORF1ab/nsp3481V481NGTGAAT11All0
ORF1ab/nsp3481V481CGTGTGT11All0
ORF1ab/nsp3481V481VgtGgtT11AY.10.000396
ORF1ab/nsp3481V481LGtgTtg11AY.1050.000643
ORF1ab/nsp3481V481VgtGgtA11AY.1140.000231
ORF1ab/nsp3481V481LGtgTtg11AY.1170.000085
ORF1ab/nsp3481V481VgtGgtT11AY.1180.000063
ORF1ab/nsp3481V481LGtgTtg11AY.1180.000063
ORF1ab/nsp3481V481VgtGgtT11AY.120.000316
ORF1ab/nsp3481V481VgtGgtA11AY.120.10.000321
ORF1ab/nsp3481V481LGtgTtg11AY.120.10.000321
ORF1ab/nsp3481V481VgtGgtT11AY.120.2.10.000498
ORF1ab/nsp3481V481VgtGgtT11AY.1210.000135
ORF1ab/nsp3481V481LGtgTtg11AY.130.000161
ORF1ab/nsp3481V481VgtGgtT11AY.140.000088
ORF1ab/nsp3481V481LGtgTtg11AY.160.00038
ORF1ab/nsp3481V481del1gtGgt-11AY.160.00038
ORF1ab/nsp3481V481VgtGgtT11AY.170.008197
ORF1ab/nsp3481V481AgTggCg11AY.190.00114
ORF1ab/nsp3481V481VgtGgtA11AY.270.000065
ORF1ab/nsp3481V481SGTGTCT11AY.30.00001
ORF1ab/nsp3481V481VgtGgtA11AY.300.000396
ORF1ab/nsp3481V481VgtGgtT11AY.350.000233
ORF1ab/nsp3481V481LGtgTtg11AY.370.000316
ORF1ab/nsp3481V481VgtGgtT11AY.380.000499
ORF1ab/nsp3481V481del1Gtg-tg11AY.39.1.10.000725
ORF1ab/nsp3481V481AgTggCg11AY.40.000002
ORF1ab/nsp3481V481VgtGgtT11AY.4.20.000022
ORF1ab/nsp3481V481AgTggCg11AY.4.2.10.000149
ORF1ab/nsp3481V481LGtgTtg11AY.4.50.000107
ORF1ab/nsp3481V481VgtGgtT11AY.4.50.000107
ORF1ab/nsp3481V481MGtgAtg11AY.4.50.000107
ORF1ab/nsp3481V481delGTG---11AY.4.50.000107
ORF1ab/nsp3481V481SGTGTCT11AY.440.000006
ORF1ab/nsp3481V481del1Gtg-tg11AY.440.000006
ORF1ab/nsp3481V481IGtGAtA11AY.440.000006
ORF1ab/nsp3481V481CGTGTGT11AY.440.000006
ORF1ab/nsp3481V481XGTGTGA11AY.440.000006
ORF1ab/nsp3481V481AgTggCg11AY.460.000104
ORF1ab/nsp3481V481VgtGgtT11AY.46.20.000635
ORF1ab/nsp3481V481LGtgTtg11AY.46.30.000934
ORF1ab/nsp3481V481VgtGgtA11AY.46.60.000072
ORF1ab/nsp3481V481VgtGgtT11AY.520.000814
ORF1ab/nsp3481V481VgtGgtT11AY.540.000095
ORF1ab/nsp3481V481LGtgTtg11AY.570.000656
ORF1ab/nsp3481V481VgtGgtT11AY.580.000907
ORF1ab/nsp3481V481VgtGgtT11AY.640.000595
ORF1ab/nsp3481V481SGTGTCT11AY.670.000464
ORF1ab/nsp3481V481VgtGgtT11AY.7.20.000559
ORF1ab/nsp3481V481VgtGgtT11AY.700.000209
ORF1ab/nsp3481V481LGtgTtg11AY.750.000056
ORF1ab/nsp3481V481VgtGgtT11AY.790.001211
ORF1ab/nsp3481V481LGtgTtg11AY.840.000437
ORF1ab/nsp3481V481VgtGgtT11AY.870.000833
ORF1ab/nsp3481V481VgtGgtT11AY.880.000884
ORF1ab/nsp3481V481VgtGgtT11AY.970.001701
ORF1ab/nsp3481V481SGTGTCA11AY.990.001049
ORF1ab/nsp3481V481VgtGgtT11AY.99.20.000092
ORF1ab/nsp3481V481LGtgTtg11AZ.30.00152
ORF1ab/nsp3481V481LGtgTtg11B0.000128
ORF1ab/nsp3481V481AgTggCg11B.10.000009
ORF1ab/nsp3481V481MGtgAtg11B.1.10.000018
ORF1ab/nsp3481V481LGtgTtg11B.1.1.2400.004695
ORF1ab/nsp3481V481VgtGgtT11B.1.1.250.000569
ORF1ab/nsp3481V481VgtGgtT11B.1.1.260.005236
ORF1ab/nsp3481V481VgtGgtT11B.1.1.280.000311
ORF1ab/nsp3481V481LGtgTtg11B.1.1.2940.001266
ORF1ab/nsp3481V481VgtGgtA11B.1.1.3030.002762
ORF1ab/nsp3481V481VgtGgtT11B.1.1.3060.000438
ORF1ab/nsp3481V481VgtGgtT11B.1.1.3330.001076
ORF1ab/nsp3481V481LGtgTtg11B.1.1.3340.016393
ORF1ab/nsp3481V481VgtGgtT11B.1.1.3350.012987
ORF1ab/nsp3481V481LGtgTtg11B.1.1.3540.004386
ORF1ab/nsp3481V481VgtGgtT11B.1.1.370.000193
ORF1ab/nsp3481V481delGTG---11B.1.1.390.00051
ORF1ab/nsp3481V481del1gtGgt-11B.1.1.5190.00004
ORF1ab/nsp3481V481delGTG---11B.1.1.5190.00004
ORF1ab/nsp3481V481VgtGgtT11B.1.1.5210.005348
ORF1ab/nsp3481V481VgtGgtT11B.1.1.5250.005464
ORF1ab/nsp3481V481MGtgAtg11B.1.1.70.000001
ORF1ab/nsp3481V481GgTggGg11B.1.1.70.000001
ORF1ab/nsp3481V481LGtgTtg11B.1.1110.001175
ORF1ab/nsp3481V481VgtGgtT11B.1.177.210.000076
ORF1ab/nsp3481V481LGtgTtg11B.1.177.460.000918
ORF1ab/nsp3481V481VgtGgtT11B.1.177.600.000218
ORF1ab/nsp3481V481LGtgTtg11B.1.177.650.000665
ORF1ab/nsp3481V481LGtgTtg11B.1.177.70.000165
ORF1ab/nsp3481V481VgtGgtT11B.1.177.730.000566
ORF1ab/nsp3481V481delGTG---11B.1.20.000009
ORF1ab/nsp3481V481EgTggAg11B.1.20.000009
ORF1ab/nsp3481V481LGtgTtg11B.1.2060.000816
ORF1ab/nsp3481V481VgtGgtT11B.1.2100.002132
ORF1ab/nsp3481V481VgtGgtT11B.1.2210.000071
ORF1ab/nsp3481V481LGtgTtg11B.1.2210.000071
ORF1ab/nsp3481V481LGtgTtg11B.1.221.10.002907
ORF1ab/nsp3481V481LGtgTtg11B.1.2340.000132
ORF1ab/nsp3481V481VgtGgtT11B.1.2400.000216
ORF1ab/nsp3481V481VgtGgtT11B.1.2410.000812
ORF1ab/nsp3481V481VgtGgtT11B.1.2580.000067
ORF1ab/nsp3481V481LGtgTtg11B.1.2600.003344
ORF1ab/nsp3481V481LGtgTtg11B.1.2790.000514
ORF1ab/nsp3481V481VgtGgtT11B.1.2800.007143
ORF1ab/nsp3481V481AgTggCg11B.1.3510.00003
ORF1ab/nsp3481V481VgtGgtT11B.1.351.30.000876
ORF1ab/nsp3481V481delGTG---11B.1.360.000146
ORF1ab/nsp3481V481VgtGgtT11B.1.36.10.00114
ORF1ab/nsp3481V481LGtgTtg11B.1.36.170.000494
ORF1ab/nsp3481V481LGtgTtg11B.1.36.220.001208
ORF1ab/nsp3481V481VgtGgtT11B.1.36.290.000517
ORF1ab/nsp3481V481LGtgTtg11B.1.36.290.000517
ORF1ab/nsp3481V481del1Gtg-tg11B.1.3800.006623
ORF1ab/nsp3481V481VgtGgtT11B.1.3960.000706
ORF1ab/nsp3481V481VgtGgtT11B.1.3970.004854
ORF1ab/nsp3481V481LGtgTtg11B.1.3990.001934
ORF1ab/nsp3481V481LGtgTtg11B.1.4270.00005
ORF1ab/nsp3481V481AgTggCg11B.1.4290.000024
ORF1ab/nsp3481V481EgTggAg11B.1.4290.000024
ORF1ab/nsp3481V481GgTggGg11B.1.4290.000024
ORF1ab/nsp3481V481VgtGgtT11B.1.4520.013699
ORF1ab/nsp3481V481VgtGgtA11B.1.4590.004082
ORF1ab/nsp3481V481VgtGgtA11B.1.4700.001404
ORF1ab/nsp3481V481LGtgTtg11B.1.4920.007042
ORF1ab/nsp3481V481LGtgTtg11B.1.4990.00105
ORF1ab/nsp3481V481LGtgTtg11B.1.5250.000113
ORF1ab/nsp3481V481del1Gtg-tg11B.1.5260.000024
ORF1ab/nsp3481V481VgtGgtT11B.1.5400.009709
ORF1ab/nsp3481V481VgtGgtT11B.1.5580.004566
ORF1ab/nsp3481V481LGtgTtg11B.1.5750.000303
ORF1ab/nsp3481V481VgtGgtT11B.1.5820.000491
ORF1ab/nsp3481V481LGtgTtg11B.1.5950.000261
ORF1ab/nsp3481V481MGtgAtg11B.1.617.20.000004
ORF1ab/nsp3481V481EgTggAg11B.1.617.20.000004
ORF1ab/nsp3481V481LGtgTtg11B.1.6200.000946
ORF1ab/nsp3481V481VgtGgtT11B.1.6210.000089
ORF1ab/nsp3481V481VgtGgtT11B.1.621.10.000506
ORF1ab/nsp3481V481VgtGgtA11B.1.6230.000536
ORF1ab/nsp3481V481VgtGgtT11B.1.6280.000352
ORF1ab/nsp3481V481VgtGgtT11B.1.90.006173
ORF1ab/nsp3481V481delGTG---11B.570.015152
ORF1ab/nsp3481V481VgtGgtT11B.6.60.000889
ORF1ab/nsp3481V481LGtgCtg11C.160.00106
ORF1ab/nsp3481V481VgtGgtT11C.360.000911
ORF1ab/nsp3481V481del2GTg--g11C.360.000911
ORF1ab/nsp3481V481VgtGgtT11C.36.30.000567
ORF1ab/nsp3481V481del1Gtg-tg11D.20.000075
ORF1ab/nsp3481V481VgtGgtT11N.40.004255
ORF1ab/nsp3481V481delGTG---11P.10.000016
ORF1ab/nsp3481V481VgtGgtT11P.1.10.000318
ORF1ab/nsp3481V481VgtGgtT11P.1.150.000232
ORF1ab/nsp3481V481IGtGAtT11P.1.160.000374
ORF1ab/nsp3481V481VgtGgtT11P.1.20.001156
ORF1ab/nsp3481V481LGtgTtg11P.1.70.000319
ORF1ab/nsp3481V481VgtGgtT11Q.30.000145
ORF1ab/nsp3481V481LGtgTtg11Q.80.000165
ORF1ab/nsp3481V481delGTG---11R.10.00009
ORF1ab/nsp3481V481delGTG---11U.30.003861