CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF1ab/nsp3 : CodonNum = 477 & Codon = gCt

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF1ab/nsp3477V477AV1295AnonsyngTtgCt28228214148-4150

Details of the mutation no within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF1ab/nsp3477V477AgTtgCt282282All0.000054
ORF1ab/nsp3477V477AgTtgCt105105B.1.1770.001383
ORF1ab/nsp3477V477AgTtgCt2424B.1.1.1781
ORF1ab/nsp3477V477AgTtgCt2323AY.40.000036
ORF1ab/nsp3477V477AgTtgCt1616B.1.617.20.00006
ORF1ab/nsp3477V477AgTtgCt1515B.1.1.70.000013
ORF1ab/nsp3477V477AgTtgCt1212C.370.001393
ORF1ab/nsp3477V477AgTtgCt1010AY.440.000061
ORF1ab/nsp3477V477AgTtgCt77B.10.000064
ORF1ab/nsp3477V477AgTtgCt66P.10.000095
ORF1ab/nsp3477V477AgTtgCt55AY.200.000194
ORF1ab/nsp3477V477AgTtgCt55AY.250.00003
ORF1ab/nsp3477V477AgTtgCt55AY.750.00028
ORF1ab/nsp3477V477AgTtgCt44AY.470.000124
ORF1ab/nsp3477V477AgTtgCt44B.1.6230.002146
ORF1ab/nsp3477V477AgTtgCt33AY.1030.000019
ORF1ab/nsp3477V477AgTtgCt33AY.380.001498
ORF1ab/nsp3477V477AgTtgCt33B.1.4290.000071
ORF1ab/nsp3477V477AgTtgCt22AY.1020.000053
ORF1ab/nsp3477V477AgTtgCt22AY.1180.000125
ORF1ab/nsp3477V477AgTtgCt22AY.710.00095
ORF1ab/nsp3477V477AgTtgCt22P.1.160.000748
ORF1ab/nsp3477V477AgTtgCt11AY.1000.000046
ORF1ab/nsp3477V477AgTtgCt11AY.1130.000142
ORF1ab/nsp3477V477AgTtgCt11AY.20.000356
ORF1ab/nsp3477V477AgTtgCt11AY.340.000097
ORF1ab/nsp3477V477AgTtgCt11AY.430.000004
ORF1ab/nsp3477V477AgTtgCt11AY.450.000122
ORF1ab/nsp3477V477AgTtgCt11AY.460.000104
ORF1ab/nsp3477V477AgTtgCt11AY.50.000021
ORF1ab/nsp3477V477AgTtgCt11AY.520.000814
ORF1ab/nsp3477V477AgTtgCt11AY.7.10.000113
ORF1ab/nsp3477V477AgTtgCt11AY.850.000427
ORF1ab/nsp3477V477AgTtgCt11AY.870.000833
ORF1ab/nsp3477V477AgTtgCt11AY.9.10.000084
ORF1ab/nsp3477V477AgTtgCt11AY.99.20.000092
ORF1ab/nsp3477V477AgTtgCt11B.1.1280.000635
ORF1ab/nsp3477V477AgTtgCt11B.1.177.160.000664
ORF1ab/nsp3477V477AgTtgCt11B.1.4920.007042
ORF1ab/nsp3477V477AgTtgCt11B.1.5960.000087
ORF1ab/nsp3477V477AgTtgCt11B.1.617.10.000129
ORF1ab/nsp3477V477AgTtgCt11B.1.6370.000073
ORF1ab/nsp3477V477AgTtgCt11C.36.30.000567
ORF1ab/nsp3477V477AgTtgCt11C.37.10.002618
ORF1ab/nsp3477V477AgTtgCt11D.20.000075
ORF1ab/nsp3477V477AgTtgCt11P.1.150.000232