CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF1ab/nsp3 : CodonNum = 477

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF1ab/nsp3477V477FV1295FnonsynGttTtt3931393114148-4150
ORF1ab/nsp3477V477IV1295InonsynGttAtt147114700.999324148-4150
ORF1ab/nsp3477V477IV1295InonsynGtTAtA147110.000679814148-4150
ORF1ab/nsp3477V477VV1295VsyngtTgtC6645760.867474148-4150
ORF1ab/nsp3477V477VV1295VsyngtTgtG664800.1204824148-4150
ORF1ab/nsp3477V477VV1295VsyngtTgtA66480.01204824148-4150
ORF1ab/nsp3477V477AV1295AnonsyngTtgCt28228214148-4150
ORF1ab/nsp3477V477GV1295GnonsyngTtgGt929214148-4150
ORF1ab/nsp3477V477DV1295DnonsyngTtgAt424214148-4150
ORF1ab/nsp3477V477delV1295deldelGTT---191914148-4150
ORF1ab/nsp3477V477del1V1295del1delGtt-tt19110.5789474148-4150
ORF1ab/nsp3477V477del1V1295del1delgTtg-t1980.4210534148-4150
ORF1ab/nsp3477V477del2V1295del2delGTt--t650.8333334148-4150
ORF1ab/nsp3477V477del2V1295del2delgTTg--610.1666674148-4150
ORF1ab/nsp3477V477LV1295LnonsynGttCtt5514148-4150
ORF1ab/nsp3477V477SV1295SnonsynGTtTCt320.6666674148-4150
ORF1ab/nsp3477V477SV1295SnonsynGTtAGt310.3333334148-4150
ORF1ab/nsp3477V477NV1295NnonsynGTtAAt2214148-4150
ORF1ab/nsp3477V477EV1295EnonsyngTTgAA1114148-4150
ORF1ab/nsp3477V477TV1295TnonsynGTtACt1114148-4150
ORF1ab/nsp3477V477KV1295KnonsynGTTAAA1114148-4150
ORF1ab/nsp3477V477CV1295CnonsynGTtTGt1114148-4150
ORF1ab/nsp3477V477PV1295PnonsynGTtCCt1114148-4150

Details of the mutation no within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF1ab/nsp3477V477FGttTtt39313931All0.000752
ORF1ab/nsp3477V477FGttTtt17011701B.1.1.70.001523
ORF1ab/nsp3477V477IGttAtt14701471All0.000281
ORF1ab/nsp3477V477IGtTAtA11471All0
ORF1ab/nsp3477V477IGttAtt10181018AY.920.292445
ORF1ab/nsp3477V477VgtTgtC576664All0.00011
ORF1ab/nsp3477V477VgtTgtG80664All0.000015
ORF1ab/nsp3477V477VgtTgtA8664All0.000002
ORF1ab/nsp3477V477AgTtgCt282282All0.000054
ORF1ab/nsp3477V477FGttTtt244244P.10.003844
ORF1ab/nsp3477V477FGttTtt241241AY.40.000375
ORF1ab/nsp3477V477FGttTtt196196AY.440.001193
ORF1ab/nsp3477V477FGttTtt182182AY.430.000806
ORF1ab/nsp3477V477VgtTgtC157161B.1.1.70.000141
ORF1ab/nsp3477V477VgtTgtG3161B.1.1.70.000003
ORF1ab/nsp3477V477VgtTgtA1161B.1.1.70.000001
ORF1ab/nsp3477V477FGttTtt143143AY.260.004048
ORF1ab/nsp3477V477IGttAtt134134B.1.1.70.00012
ORF1ab/nsp3477V477VgtTgtC128128AY.790.154964
ORF1ab/nsp3477V477FGttTtt105105B.10.000962
ORF1ab/nsp3477V477AgTtgCt105105B.1.1770.001383
ORF1ab/nsp3477V477FGttTtt104104B.1.20.000916
ORF1ab/nsp3477V477VgtTgtC71103AY.40.000111
ORF1ab/nsp3477V477VgtTgtG31103AY.40.000048
ORF1ab/nsp3477V477VgtTgtA1103AY.40.000002
ORF1ab/nsp3477V477GgTtgGt9292All0.000018
ORF1ab/nsp3477V477FGttTtt8484B.1.617.20.000316
ORF1ab/nsp3477V477VgtTgtC6971B.1.617.20.00026
ORF1ab/nsp3477V477VgtTgtG271B.1.617.20.000008
ORF1ab/nsp3477V477FGttTtt6464AY.250.000385
ORF1ab/nsp3477V477FGttTtt6262AY.1030.000385
ORF1ab/nsp3477V477IGttAtt4747AY.440.000286
ORF1ab/nsp3477V477IGttAtt4747B.10.00043
ORF1ab/nsp3477V477FGttTtt4747B.1.2340.006201
ORF1ab/nsp3477V477DgTtgAt4242All0.000008
ORF1ab/nsp3477V477IGttAtt4040AY.40.000062
ORF1ab/nsp3477V477GgTtgGt3535B.1.1.70.000031
ORF1ab/nsp3477V477FGttTtt3232B.1.1770.000421
ORF1ab/nsp3477V477FGttTtt2929AY.1020.000769
ORF1ab/nsp3477V477FGttTtt2727AY.1170.002282
ORF1ab/nsp3477V477FGttTtt2525B.1.10.000454
ORF1ab/nsp3477V477DgTtgAt2424B0.003067
ORF1ab/nsp3477V477AgTtgCt2424B.1.1.1781
ORF1ab/nsp3477V477AgTtgCt2323AY.40.000036
ORF1ab/nsp3477V477FGttTtt2222B.1.2890.058511
ORF1ab/nsp3477V477VgtTgtG2121AY.4.50.002257
ORF1ab/nsp3477V477FGttTtt2020A.20.013236
ORF1ab/nsp3477V477FGttTtt2020AY.1210.002706
ORF1ab/nsp3477V477FGttTtt2020B.1.1.4300.833333
ORF1ab/nsp3477V477IGttAtt2020B.1.617.20.000075
ORF1ab/nsp3477V477delGTT---1919All0.000004
ORF1ab/nsp3477V477del1Gtt-tt1119All0.000002
ORF1ab/nsp3477V477del1gTtg-t819All0.000002
ORF1ab/nsp3477V477FGttTtt1919AY.390.00047
ORF1ab/nsp3477V477FGttTtt1919Q.80.003133
ORF1ab/nsp3477V477GgTtgGt1717AY.40.000026
ORF1ab/nsp3477V477VgtTgtC1616AY.9.10.00134
ORF1ab/nsp3477V477FGttTtt1616B.1.221.20.064257
ORF1ab/nsp3477V477AgTtgCt1616B.1.617.20.00006
ORF1ab/nsp3477V477AgTtgCt1515B.1.1.70.000013
ORF1ab/nsp3477V477VgtTgtC1414AY.1030.000087
ORF1ab/nsp3477V477FGttTtt1414AY.98.10.000678
ORF1ab/nsp3477V477FGttTtt1313B.1.4500.147727
ORF1ab/nsp3477V477FGttTtt1212AY.200.000466
ORF1ab/nsp3477V477FGttTtt1212AY.4.20.00026
ORF1ab/nsp3477V477VgtTgtC1212AY.50.000248
ORF1ab/nsp3477V477FGttTtt1212AY.570.007874
ORF1ab/nsp3477V477FGttTtt1212B.1.4590.04898
ORF1ab/nsp3477V477AgTtgCt1212C.370.001393
ORF1ab/nsp3477V477FGttTtt1212C.370.001393
ORF1ab/nsp3477V477FGttTtt1111AY.1190.000388
ORF1ab/nsp3477V477VgtTgtC1111AY.420.000443
ORF1ab/nsp3477V477FGttTtt1111B.1.36.360.006623
ORF1ab/nsp3477V477IGttAtt1010AY.250.00006
ORF1ab/nsp3477V477VgtTgtC810AY.430.000035
ORF1ab/nsp3477V477VgtTgtA210AY.430.000009
ORF1ab/nsp3477V477AgTtgCt1010AY.440.000061
ORF1ab/nsp3477V477FGttTtt1010AY.5.40.002767
ORF1ab/nsp3477V477FGttTtt1010B.1.5260.000235
ORF1ab/nsp3477V477FGttTtt1010P.20.001866
ORF1ab/nsp3477V477FGttTtt99AY.290.000142
ORF1ab/nsp3477V477VgtTgtC99AY.440.000055
ORF1ab/nsp3477V477FGttTtt99AY.590.004767
ORF1ab/nsp3477V477VgtTgtC99B.1.2210.000639
ORF1ab/nsp3477V477FGttTtt99B.1.438.10.000965
ORF1ab/nsp3477V477FGttTtt99B.60.008189
ORF1ab/nsp3477V477IGttAtt99Q.10.001137
ORF1ab/nsp3477V477FGttTtt88AY.30.00008
ORF1ab/nsp3477V477IGttAtt88AY.430.000035
ORF1ab/nsp3477V477FGttTtt88AY.9.10.00067
ORF1ab/nsp3477V477IGttAtt88B.1.10.000145
ORF1ab/nsp3477V477FGttTtt88B.1.3110.002197
ORF1ab/nsp3477V477GgTtgGt88B.1.617.10.001032
ORF1ab/nsp3477V477FGttTtt77AY.4.30.005892
ORF1ab/nsp3477V477IGttAtt77AY.450.000852
ORF1ab/nsp3477V477FGttTtt77AY.50.000145
ORF1ab/nsp3477V477IGttAtt77AY.50.000145
ORF1ab/nsp3477V477FGttTtt77AY.540.000667
ORF1ab/nsp3477V477AgTtgCt77B.10.000064
ORF1ab/nsp3477V477FGttTtt77B.1.1.4340.00244
ORF1ab/nsp3477V477FGttTtt77B.1.1.5190.000278
ORF1ab/nsp3477V477FGttTtt77B.1.177.210.000535
ORF1ab/nsp3477V477FGttTtt77B.1.5960.00061
ORF1ab/nsp3477V477FGttTtt77C.36.30.003971
ORF1ab/nsp3477V477del2GTt--t56All0.000001
ORF1ab/nsp3477V477del2gTTg--16All0
ORF1ab/nsp3477V477IGttAtt66AY.1200.000223
ORF1ab/nsp3477V477IGttAtt66AY.230.000418
ORF1ab/nsp3477V477IGttAtt66AY.390.000148
ORF1ab/nsp3477V477VgtTgtC46B.10.000037
ORF1ab/nsp3477V477VgtTgtG26B.10.000018
ORF1ab/nsp3477V477DgTtgAt66B.1.10.000109
ORF1ab/nsp3477V477FGttTtt66B.1.3510.000178
ORF1ab/nsp3477V477AgTtgCt66P.10.000095
ORF1ab/nsp3477V477FGttTtt66P.1.10.001906
ORF1ab/nsp3477V477DgTtgAt66P.60.018868
ORF1ab/nsp3477V477LGttCtt55All0.000001
ORF1ab/nsp3477V477IGttAtt55AY.1020.000133
ORF1ab/nsp3477V477FGttTtt55AY.1200.000186
ORF1ab/nsp3477V477AgTtgCt55AY.200.000194
ORF1ab/nsp3477V477AgTtgCt55AY.250.00003
ORF1ab/nsp3477V477VgtTgtC55AY.250.00003
ORF1ab/nsp3477V477FGttTtt55AY.39.10.000198
ORF1ab/nsp3477V477IGttAtt55AY.420.000201
ORF1ab/nsp3477V477AgTtgCt55AY.750.00028
ORF1ab/nsp3477V477GgTtgGt55B.10.000046
ORF1ab/nsp3477V477VgtTgtG55B.1.5950.001305
ORF1ab/nsp3477V477IGttAtt55B.1.617.10.000645
ORF1ab/nsp3477V477IGttAtt55C.370.00058
ORF1ab/nsp3477V477VgtTgtC55P.10.000079
ORF1ab/nsp3477V477VgtTgtC44AY.1000.000184
ORF1ab/nsp3477V477FGttTtt44AY.120.10.001284
ORF1ab/nsp3477V477FGttTtt44AY.340.000388
ORF1ab/nsp3477V477FGttTtt44AY.4.50.00043
ORF1ab/nsp3477V477FGttTtt44AY.46.20.002541
ORF1ab/nsp3477V477AgTtgCt44AY.470.000124
ORF1ab/nsp3477V477FGttTtt44AY.470.000124
ORF1ab/nsp3477V477FGttTtt44AY.700.000834
ORF1ab/nsp3477V477VgtTgtC44AY.750.000224
ORF1ab/nsp3477V477GgTtgGt44AY.750.000224
ORF1ab/nsp3477V477GgTtgGt44B.1.10.000073
ORF1ab/nsp3477V477FGttTtt44B.1.1.2630.006231
ORF1ab/nsp3477V477FGttTtt44B.1.1.3180.001207
ORF1ab/nsp3477V477FGttTtt44B.1.1.3980.012903
ORF1ab/nsp3477V477IGttAtt44B.1.1.4320.005063
ORF1ab/nsp3477V477FGttTtt44B.1.1600.000125
ORF1ab/nsp3477V477GgTtgGt44B.1.3510.000119
ORF1ab/nsp3477V477FGttTtt44B.1.4970.001259
ORF1ab/nsp3477V477IGttAtt44B.1.6210.000354
ORF1ab/nsp3477V477AgTtgCt44B.1.6230.002146
ORF1ab/nsp3477V477FGttTtt44D.20.0003
ORF1ab/nsp3477V477IGttAtt44P.10.000063
ORF1ab/nsp3477V477FGttTtt44P.1.150.000929
ORF1ab/nsp3477V477FGttTtt33A.10.000846
ORF1ab/nsp3477V477SGTtTCt23All0
ORF1ab/nsp3477V477SGTtAGt13All0
ORF1ab/nsp3477V477VgtTgtC33AY.1020.00008
ORF1ab/nsp3477V477AgTtgCt33AY.1030.000019
ORF1ab/nsp3477V477FGttTtt33AY.1040.005952
ORF1ab/nsp3477V477FGttTtt33AY.1180.000188
ORF1ab/nsp3477V477VgtTgtG23AY.1200.000074
ORF1ab/nsp3477V477VgtTgtC13AY.1200.000037
ORF1ab/nsp3477V477FGttTtt33AY.130.000483
ORF1ab/nsp3477V477FGttTtt33AY.140.000264
ORF1ab/nsp3477V477IGttAtt33AY.200.000117
ORF1ab/nsp3477V477del1Gtt-tt33AY.250.000018
ORF1ab/nsp3477V477IGttAtt33AY.260.000085
ORF1ab/nsp3477V477IGttAtt33AY.30.00003
ORF1ab/nsp3477V477VgtTgtC33AY.30.00003
ORF1ab/nsp3477V477AgTtgCt33AY.380.001498
ORF1ab/nsp3477V477FGttTtt33AY.630.001161
ORF1ab/nsp3477V477FGttTtt33AY.750.000168
ORF1ab/nsp3477V477VgtTgtG33AY.80.001818
ORF1ab/nsp3477V477IGttAtt33AY.840.001312
ORF1ab/nsp3477V477VgtTgtG33AY.90.000203
ORF1ab/nsp3477V477FGttTtt33AY.90.000203
ORF1ab/nsp3477V477VgtTgtC33AY.9.20.00011
ORF1ab/nsp3477V477FGttTtt33AZ.10.002602
ORF1ab/nsp3477V477FGttTtt33B.1.1.3450.130435
ORF1ab/nsp3477V477delGTT---33B.1.1.70.000003
ORF1ab/nsp3477V477del1gTtg-t23B.1.1.70.000002
ORF1ab/nsp3477V477del1Gtt-tt13B.1.1.70.000001
ORF1ab/nsp3477V477IGttAtt33B.1.1770.00004
ORF1ab/nsp3477V477del1gTtg-t33B.1.20.000026
ORF1ab/nsp3477V477IGttAtt33B.1.20.000026
ORF1ab/nsp3477V477VgtTgtC23B.1.20.000018
ORF1ab/nsp3477V477VgtTgtA13B.1.20.000009
ORF1ab/nsp3477V477FGttTtt33B.1.2580.0002
ORF1ab/nsp3477V477FGttTtt33B.1.3750.002459
ORF1ab/nsp3477V477VgtTgtC33B.1.3820.026786
ORF1ab/nsp3477V477FGttTtt33B.1.4270.000151
ORF1ab/nsp3477V477AgTtgCt33B.1.4290.000071
ORF1ab/nsp3477V477FGttTtt33B.1.4660.069767
ORF1ab/nsp3477V477IGttAtt33B.1.5250.000339
ORF1ab/nsp3477V477VgtTgtC33P.1.140.000143
ORF1ab/nsp3477V477FGttTtt33P.1.160.001122
ORF1ab/nsp3477V477IGttAtt120.055556
ORF1ab/nsp3477V477IGtTAtA120.055556
ORF1ab/nsp3477V477FGttTtt22A.2.50.000998
ORF1ab/nsp3477V477FGttTtt22A.2.5.20.003145
ORF1ab/nsp3477V477NGTtAAt22All0
ORF1ab/nsp3477V477FGttTtt22AY.100.00106
ORF1ab/nsp3477V477FGttTtt22AY.1000.000092
ORF1ab/nsp3477V477IGttAtt22AY.1000.000092
ORF1ab/nsp3477V477AgTtgCt22AY.1020.000053
ORF1ab/nsp3477V477IGttAtt22AY.1030.000012
ORF1ab/nsp3477V477VgtTgtC22AY.1180.000125
ORF1ab/nsp3477V477AgTtgCt22AY.1180.000125
ORF1ab/nsp3477V477VgtTgtC22AY.200.000078
ORF1ab/nsp3477V477FGttTtt22AY.230.000139
ORF1ab/nsp3477V477FGttTtt22AY.3.10.000171
ORF1ab/nsp3477V477FGttTtt22AY.420.00008
ORF1ab/nsp3477V477del1gTtg-t12AY.440.000006
ORF1ab/nsp3477V477del1Gtt-tt12AY.440.000006
ORF1ab/nsp3477V477FGttTtt22AY.450.000243
ORF1ab/nsp3477V477FGttTtt22AY.46.60.000144
ORF1ab/nsp3477V477IGttAtt22AY.5.40.000553
ORF1ab/nsp3477V477FGttTtt22AY.510.001818
ORF1ab/nsp3477V477IGttAtt22AY.60.000082
ORF1ab/nsp3477V477FGttTtt22AY.60.000082
ORF1ab/nsp3477V477FGttTtt22AY.70.000392
ORF1ab/nsp3477V477AgTtgCt22AY.710.00095
ORF1ab/nsp3477V477FGttTtt22AY.75.10.000361
ORF1ab/nsp3477V477IGttAtt22AY.820.002714
ORF1ab/nsp3477V477FGttTtt22AY.910.001461
ORF1ab/nsp3477V477FGttTtt22AY.920.000575
ORF1ab/nsp3477V477IGttAtt22AY.99.20.000184
ORF1ab/nsp3477V477delGTT---22B.10.000018
ORF1ab/nsp3477V477DgTtgAt22B.10.000018
ORF1ab/nsp3477V477VgtTgtC22B.1.10.000036
ORF1ab/nsp3477V477FGttTtt22B.1.1.10.000653
ORF1ab/nsp3477V477FGttTtt22B.1.1.1810.009091
ORF1ab/nsp3477V477FGttTtt22B.1.1.2160.001781
ORF1ab/nsp3477V477FGttTtt22B.1.1.2220.000408
ORF1ab/nsp3477V477FGttTtt22B.1.1.2250.014388
ORF1ab/nsp3477V477FGttTtt22B.1.1.280.000622
ORF1ab/nsp3477V477FGttTtt22B.1.1.3060.000877
ORF1ab/nsp3477V477FGttTtt22B.1.1.330.000842
ORF1ab/nsp3477V477FGttTtt22B.1.1.3330.002153
ORF1ab/nsp3477V477VgtTgtC22B.1.1.3350.025974
ORF1ab/nsp3477V477IGttAtt22B.1.1.390.001019
ORF1ab/nsp3477V477LGttCtt22B.1.1.70.000002
ORF1ab/nsp3477V477del2GTt--t22B.1.1.70.000002
ORF1ab/nsp3477V477FGttTtt22B.1.177.810.000379
ORF1ab/nsp3477V477FGttTtt22B.1.2010.011364
ORF1ab/nsp3477V477IGttAtt22B.1.221.30.001667
ORF1ab/nsp3477V477FGttTtt22B.1.351.20.000605
ORF1ab/nsp3477V477FGttTtt22B.1.36.290.001035
ORF1ab/nsp3477V477FGttTtt22B.1.3900.021277
ORF1ab/nsp3477V477IGttAtt22B.1.4290.000047
ORF1ab/nsp3477V477FGttTtt22B.1.4290.000047
ORF1ab/nsp3477V477VgtTgtC22B.1.466.20.000782
ORF1ab/nsp3477V477VgtTgtG22B.1.5250.000226
ORF1ab/nsp3477V477FGttTtt22B.1.5750.000607
ORF1ab/nsp3477V477FGttTtt22B.1.5820.000981
ORF1ab/nsp3477V477VgtTgtC22B.1.6210.000177
ORF1ab/nsp3477V477FGttTtt22B.1.6210.000177
ORF1ab/nsp3477V477VgtTgtC22B.1.6230.001073
ORF1ab/nsp3477V477FGttTtt22C.1.20.008511
ORF1ab/nsp3477V477FGttTtt22C.350.001548
ORF1ab/nsp3477V477GgTtgGt22P.10.000032
ORF1ab/nsp3477V477FGttTtt22P.1.100.000539
ORF1ab/nsp3477V477FGttTtt22P.1.140.000096
ORF1ab/nsp3477V477AgTtgCt22P.1.160.000748
ORF1ab/nsp3477V477VgtTgtA110.055556
ORF1ab/nsp3477V477EgTTgAA110.055556
ORF1ab/nsp3477V477KGTTAAA110.055556
ORF1ab/nsp3477V477DgTtgAt110.055556
ORF1ab/nsp3477V477NGTtAAt110.055556
ORF1ab/nsp3477V477FGttTtt11A.2.5.30.010309
ORF1ab/nsp3477V477FGttTtt11AD.20.000219
ORF1ab/nsp3477V477CGTtTGt11All0
ORF1ab/nsp3477V477KGTTAAA11All0
ORF1ab/nsp3477V477EgTTgAA11All0
ORF1ab/nsp3477V477TGTtACt11All0
ORF1ab/nsp3477V477PGTtCCt11All0
ORF1ab/nsp3477V477AgTtgCt11AY.1000.000046
ORF1ab/nsp3477V477FGttTtt11AY.1010.00049
ORF1ab/nsp3477V477IGttAtt11AY.1040.001984
ORF1ab/nsp3477V477FGttTtt11AY.1060.000335
ORF1ab/nsp3477V477FGttTtt11AY.1070.000466
ORF1ab/nsp3477V477FGttTtt11AY.1100.000113
ORF1ab/nsp3477V477FGttTtt11AY.1110.000183
ORF1ab/nsp3477V477AgTtgCt11AY.1130.000142
ORF1ab/nsp3477V477VgtTgtC11AY.1170.000085
ORF1ab/nsp3477V477GgTtgGt11AY.1170.000085
ORF1ab/nsp3477V477IGttAtt11AY.1180.000063
ORF1ab/nsp3477V477VgtTgtA11AY.1190.000035
ORF1ab/nsp3477V477IGttAtt11AY.1210.000135
ORF1ab/nsp3477V477VgtTgtC11AY.140.000088
ORF1ab/nsp3477V477FGttTtt11AY.160.00038
ORF1ab/nsp3477V477GgTtgGt11AY.16.10.00047
ORF1ab/nsp3477V477VgtTgtC11AY.16.10.00047
ORF1ab/nsp3477V477AgTtgCt11AY.20.000356
ORF1ab/nsp3477V477LGttCtt11AY.250.000006
ORF1ab/nsp3477V477del2GTt--t11AY.250.000006
ORF1ab/nsp3477V477TGTtACt11AY.250.000006
ORF1ab/nsp3477V477GgTtgGt11AY.250.000006
ORF1ab/nsp3477V477SGTtTCt11AY.250.000006
ORF1ab/nsp3477V477FGttTtt11AY.270.000065
ORF1ab/nsp3477V477GgTtgGt11AY.30.00001
ORF1ab/nsp3477V477IGttAtt11AY.3.10.000085
ORF1ab/nsp3477V477VgtTgtC11AY.3.10.000085
ORF1ab/nsp3477V477IGttAtt11AY.320.000532
ORF1ab/nsp3477V477AgTtgCt11AY.340.000097
ORF1ab/nsp3477V477FGttTtt11AY.34.10.00051
ORF1ab/nsp3477V477FGttTtt11AY.370.000316
ORF1ab/nsp3477V477GgTtgGt11AY.370.000316
ORF1ab/nsp3477V477VgtTgtG11AY.390.000025
ORF1ab/nsp3477V477GgTtgGt11AY.390.000025
ORF1ab/nsp3477V477VgtTgtC11AY.39.10.00004
ORF1ab/nsp3477V477LGttCtt11AY.40.000002
ORF1ab/nsp3477V477del1Gtt-tt11AY.40.000002
ORF1ab/nsp3477V477del2GTt--t11AY.40.000002
ORF1ab/nsp3477V477IGttAtt11AY.4.10.000737
ORF1ab/nsp3477V477IGttAtt11AY.4.20.000022
ORF1ab/nsp3477V477FGttTtt11AY.4.40.000409
ORF1ab/nsp3477V477delGTT---11AY.4.50.000107
ORF1ab/nsp3477V477IGttAtt11AY.4.50.000107
ORF1ab/nsp3477V477AgTtgCt11AY.430.000004
ORF1ab/nsp3477V477delGTT---11AY.430.000004
ORF1ab/nsp3477V477del1Gtt-tt11AY.430.000004
ORF1ab/nsp3477V477AgTtgCt11AY.450.000122
ORF1ab/nsp3477V477IGttAtt11AY.460.000104
ORF1ab/nsp3477V477FGttTtt11AY.460.000104
ORF1ab/nsp3477V477AgTtgCt11AY.460.000104
ORF1ab/nsp3477V477FGttTtt11AY.46.50.000198
ORF1ab/nsp3477V477delGTT---11AY.46.60.000072
ORF1ab/nsp3477V477IGttAtt11AY.46.60.000072
ORF1ab/nsp3477V477AgTtgCt11AY.50.000021
ORF1ab/nsp3477V477FGttTtt11AY.5.30.000337
ORF1ab/nsp3477V477IGttAtt11AY.5.30.000337
ORF1ab/nsp3477V477AgTtgCt11AY.520.000814
ORF1ab/nsp3477V477GgTtgGt11AY.650.000533
ORF1ab/nsp3477V477FGttTtt11AY.650.000533
ORF1ab/nsp3477V477delGTT---11AY.670.000464
ORF1ab/nsp3477V477GgTtgGt11AY.690.000187
ORF1ab/nsp3477V477AgTtgCt11AY.7.10.000113
ORF1ab/nsp3477V477GgTtgGt11AY.710.000475
ORF1ab/nsp3477V477FGttTtt11AY.740.000116
ORF1ab/nsp3477V477IGttAtt11AY.750.000056
ORF1ab/nsp3477V477VgtTgtC11AY.840.000437
ORF1ab/nsp3477V477FGttTtt11AY.840.000437
ORF1ab/nsp3477V477AgTtgCt11AY.850.000427
ORF1ab/nsp3477V477AgTtgCt11AY.870.000833
ORF1ab/nsp3477V477VgtTgtG11AY.870.000833
ORF1ab/nsp3477V477IGttAtt11AY.870.000833
ORF1ab/nsp3477V477AgTtgCt11AY.9.10.000084
ORF1ab/nsp3477V477FGttTtt11AY.9.20.000037
ORF1ab/nsp3477V477VgtTgtC11AY.920.000287
ORF1ab/nsp3477V477VgtTgtC11AY.940.000443
ORF1ab/nsp3477V477DgTtgAt11AY.960.002075
ORF1ab/nsp3477V477FGttTtt11AY.99.20.000092
ORF1ab/nsp3477V477AgTtgCt11AY.99.20.000092
ORF1ab/nsp3477V477del1gTtg-t11B0.000128
ORF1ab/nsp3477V477del1Gtt-tt11B.10.000009
ORF1ab/nsp3477V477SGTtAGt11B.10.000009
ORF1ab/nsp3477V477del1Gtt-tt11B.1.10.000018
ORF1ab/nsp3477V477delGTT---11B.1.10.000018
ORF1ab/nsp3477V477NGTtAAt11B.1.10.000018
ORF1ab/nsp3477V477IGttAtt11B.1.1.1290.009174
ORF1ab/nsp3477V477IGttAtt11B.1.1.2190.005
ORF1ab/nsp3477V477IGttAtt11B.1.1.2220.000204
ORF1ab/nsp3477V477FGttTtt11B.1.1.2680.014925
ORF1ab/nsp3477V477FGttTtt11B.1.1.3110.000358
ORF1ab/nsp3477V477VgtTgtG11B.1.1.3260.001761
ORF1ab/nsp3477V477FGttTtt11B.1.1.3260.001761
ORF1ab/nsp3477V477del2gTTg--11B.1.1.330.000421
ORF1ab/nsp3477V477FGttTtt11B.1.1.3540.004386
ORF1ab/nsp3477V477FGttTtt11B.1.1.3720.000689
ORF1ab/nsp3477V477VgtTgtC11B.1.1.410.006329
ORF1ab/nsp3477V477FGttTtt11B.1.1.4320.001266
ORF1ab/nsp3477V477VgtTgtA11B.1.1.5190.00004
ORF1ab/nsp3477V477delGTT---11B.1.1.5190.00004
ORF1ab/nsp3477V477FGttTtt11B.1.1.5260.003546
ORF1ab/nsp3477V477FGttTtt11B.1.1.530.013699
ORF1ab/nsp3477V477IGttAtt11B.1.1.630.000386
ORF1ab/nsp3477V477FGttTtt11B.1.1110.001175
ORF1ab/nsp3477V477FGttTtt11B.1.1260.001276
ORF1ab/nsp3477V477AgTtgCt11B.1.1280.000635
ORF1ab/nsp3477V477DgTtgAt11B.1.1390.000733
ORF1ab/nsp3477V477AgTtgCt11B.1.177.160.000664
ORF1ab/nsp3477V477GgTtgGt11B.1.177.440.000519
ORF1ab/nsp3477V477FGttTtt11B.1.177.770.000726
ORF1ab/nsp3477V477LGttCtt11B.1.177.80.000752
ORF1ab/nsp3477V477FGttTtt11B.1.177.860.000183
ORF1ab/nsp3477V477delGTT---11B.1.20.000009
ORF1ab/nsp3477V477CGTtTGt11B.1.20.000009
ORF1ab/nsp3477V477VgtTgtG11B.1.2100.002132
ORF1ab/nsp3477V477FGttTtt11B.1.214.20.0006
ORF1ab/nsp3477V477GgTtgGt11B.1.2210.000071
ORF1ab/nsp3477V477delGTT---11B.1.2210.000071
ORF1ab/nsp3477V477FGttTtt11B.1.2390.001221
ORF1ab/nsp3477V477FGttTtt11B.1.2410.000812
ORF1ab/nsp3477V477IGttAtt11B.1.2580.000067
ORF1ab/nsp3477V477DgTtgAt11B.1.2650.001271
ORF1ab/nsp3477V477GgTtgGt11B.1.3240.001605
ORF1ab/nsp3477V477FGttTtt11B.1.3360.002439
ORF1ab/nsp3477V477FGttTtt11B.1.3490.000715
ORF1ab/nsp3477V477VgtTgtC11B.1.3510.00003
ORF1ab/nsp3477V477VgtTgtC11B.1.360.000146
ORF1ab/nsp3477V477delGTT---11B.1.360.000146
ORF1ab/nsp3477V477FGttTtt11B.1.360.000146
ORF1ab/nsp3477V477del1Gtt-tt11B.1.36.290.000517
ORF1ab/nsp3477V477FGttTtt11B.1.36.80.001
ORF1ab/nsp3477V477FGttTtt11B.1.3660.004878
ORF1ab/nsp3477V477GgTtgGt11B.1.3690.000285
ORF1ab/nsp3477V477FGttTtt11B.1.4010.008197
ORF1ab/nsp3477V477IGttAtt11B.1.4030.003268
ORF1ab/nsp3477V477FGttTtt11B.1.4090.000781
ORF1ab/nsp3477V477VgtTgtC11B.1.4270.00005
ORF1ab/nsp3477V477VgtTgtG11B.1.4290.000024
ORF1ab/nsp3477V477FGttTtt11B.1.4380.006536
ORF1ab/nsp3477V477FGttTtt11B.1.4410.009615
ORF1ab/nsp3477V477VgtTgtC11B.1.4560.003268
ORF1ab/nsp3477V477FGttTtt11B.1.466.20.000391
ORF1ab/nsp3477V477AgTtgCt11B.1.4920.007042
ORF1ab/nsp3477V477FGttTtt11B.1.5030.002488
ORF1ab/nsp3477V477FGttTtt11B.1.5090.000866
ORF1ab/nsp3477V477IGttAtt11B.1.5170.000427
ORF1ab/nsp3477V477FGttTtt11B.1.5250.000113
ORF1ab/nsp3477V477PGTtCCt11B.1.5250.000113
ORF1ab/nsp3477V477VgtTgtG11B.1.5260.000024
ORF1ab/nsp3477V477FGttTtt11B.1.5300.007143
ORF1ab/nsp3477V477FGttTtt11B.1.5380.008065
ORF1ab/nsp3477V477FGttTtt11B.1.5600.00463
ORF1ab/nsp3477V477FGttTtt11B.1.5680.001111
ORF1ab/nsp3477V477IGttAtt11B.1.5820.000491
ORF1ab/nsp3477V477FGttTtt11B.1.5950.000261
ORF1ab/nsp3477V477IGttAtt11B.1.5960.000087
ORF1ab/nsp3477V477AgTtgCt11B.1.5960.000087
ORF1ab/nsp3477V477VgtTgtC11B.1.617.10.000129
ORF1ab/nsp3477V477AgTtgCt11B.1.617.10.000129
ORF1ab/nsp3477V477del1gTtg-t11B.1.617.20.000004
ORF1ab/nsp3477V477FGttTtt11B.1.6230.000536
ORF1ab/nsp3477V477FGttTtt11B.1.6280.000352
ORF1ab/nsp3477V477FGttTtt11B.1.6370.000073
ORF1ab/nsp3477V477AgTtgCt11B.1.6370.000073
ORF1ab/nsp3477V477IGttAtt11B.150.017544
ORF1ab/nsp3477V477FGttTtt11B.400.000364
ORF1ab/nsp3477V477delGTT---11B.570.015152
ORF1ab/nsp3477V477FGttTtt11C.180.002591
ORF1ab/nsp3477V477FGttTtt11C.360.000911
ORF1ab/nsp3477V477AgTtgCt11C.36.30.000567
ORF1ab/nsp3477V477VgtTgtC11C.370.000116
ORF1ab/nsp3477V477IGttAtt11C.37.10.002618
ORF1ab/nsp3477V477FGttTtt11C.37.10.002618
ORF1ab/nsp3477V477AgTtgCt11C.37.10.002618
ORF1ab/nsp3477V477AgTtgCt11D.20.000075
ORF1ab/nsp3477V477VgtTgtC11D.20.000075
ORF1ab/nsp3477V477SGTtTCt11P.10.000016
ORF1ab/nsp3477V477delGTT---11P.10.000016
ORF1ab/nsp3477V477delGTT---11P.1.10.000318
ORF1ab/nsp3477V477del2GTt--t11P.1.10.000318
ORF1ab/nsp3477V477FGttTtt11P.1.120.000484
ORF1ab/nsp3477V477IGttAtt11P.1.140.000048
ORF1ab/nsp3477V477AgTtgCt11P.1.150.000232
ORF1ab/nsp3477V477VgtTgtC11P.1.70.000319
ORF1ab/nsp3477V477VgtTgtC11P.70.004367
ORF1ab/nsp3477V477del1Gtt-tt11Q.20.000613
ORF1ab/nsp3477V477delGTT---11R.10.00009
ORF1ab/nsp3477V477delGTT---11U.30.003861