CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF1ab/nsp3 : CodonNum = 465

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF1ab/nsp3465A465VA1283VnonsyngCtgTt10035100340.99994112-4114
ORF1ab/nsp3465A465VA1283VnonsyngCTgTC1003510.00009965124112-4114
ORF1ab/nsp3465A465AA1283AsyngcTgcC3433140.9154524112-4114
ORF1ab/nsp3465A465AA1283AsyngcTgcG343230.06705544112-4114
ORF1ab/nsp3465A465AA1283AsyngcTgcA34360.01749274112-4114
ORF1ab/nsp3465A465TA1283TnonsynGctAct2832820.9964664112-4114
ORF1ab/nsp3465A465TA1283TnonsynGcTAcC28310.003533574112-4114
ORF1ab/nsp3465A465SA1283SnonsynGctTct91900.9890114112-4114
ORF1ab/nsp3465A465SA1283SnonsynGcTTcC9110.0109894112-4114
ORF1ab/nsp3465A465del1A1283del1delgCtg-t82800.975614112-4114
ORF1ab/nsp3465A465del1A1283del1delgcTgc-8220.02439024112-4114
ORF1ab/nsp3465A465DA1283DnonsyngCtgAt343414112-4114
ORF1ab/nsp3465A465delA1283deldelGCT---252514112-4114
ORF1ab/nsp3465A465GA1283GnonsyngCtgGt7714112-4114
ORF1ab/nsp3465A465PA1283PnonsynGctCct7714112-4114
ORF1ab/nsp3465A465IA1283InonsynGCTATC210.54112-4114
ORF1ab/nsp3465A465IA1283InonsynGCtATt210.54112-4114
ORF1ab/nsp3465A465del2A1283del2delgCTg--1114112-4114

Details of the mutation no within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF1ab/nsp3465A465VgCtgTt1003410035All0.001919
ORF1ab/nsp3465A465VgCTgTC110035All0
ORF1ab/nsp3465A465VgCtgTt37063706B.1.1.70.003318
ORF1ab/nsp3465A465VgCtgTt566566B.1.177.730.320498
ORF1ab/nsp3465A465VgCtgTt488488B.1.617.20.001838
ORF1ab/nsp3465A465VgCtgTt373373AY.40.000581
ORF1ab/nsp3465A465AgcTgcC314343All0.00006
ORF1ab/nsp3465A465AgcTgcG23343All0.000004
ORF1ab/nsp3465A465AgcTgcA6343All0.000001
ORF1ab/nsp3465A465VgCtgTt306306AY.1030.0019
ORF1ab/nsp3465A465VgCtgTt289289B.1.1.1860.993127
ORF1ab/nsp3465A465TGctAct282283All0.000054
ORF1ab/nsp3465A465TGcTAcC1283All0
ORF1ab/nsp3465A465VgCtgTt260260B.1.1770.003424
ORF1ab/nsp3465A465VgCtgTt247247B.10.002262
ORF1ab/nsp3465A465VgCtgTt188188B.1.20.001655
ORF1ab/nsp3465A465VgCtgTt162162P.10.002552
ORF1ab/nsp3465A465VgCtgTt141141B.1.4270.00712
ORF1ab/nsp3465A465VgCtgTt138138B.1.5260.003244
ORF1ab/nsp3465A465VgCtgTt128128AY.250.00077
ORF1ab/nsp3465A465TGctAct120120AY.50.002478
ORF1ab/nsp3465A465VgCtgTt120120C.370.013928
ORF1ab/nsp3465A465VgCtgTt108108B.1.1.2430.440816
ORF1ab/nsp3465A465VgCtgTt107107AY.1020.002837
ORF1ab/nsp3465A465SGctTct9091All0.000017
ORF1ab/nsp3465A465SGcTTcC191All0
ORF1ab/nsp3465A465VgCtgTt9090AY.430.000399
ORF1ab/nsp3465A465VgCtgTt8989AY.20.031695
ORF1ab/nsp3465A465VgCtgTt8383AY.30.000826
ORF1ab/nsp3465A465del1gCtg-t8082All0.000015
ORF1ab/nsp3465A465del1gcTgc-282All0
ORF1ab/nsp3465A465VgCtgTt7676B.1.258.170.007902
ORF1ab/nsp3465A465AgcTgcC7174AY.40.000111
ORF1ab/nsp3465A465AgcTgcG374AY.40.000005
ORF1ab/nsp3465A465TGctAct6767AY.46.10.068789
ORF1ab/nsp3465A465VgCtgTt6666AY.440.000402
ORF1ab/nsp3465A465del1gCtg-t6666B.1.1.70.000059
ORF1ab/nsp3465A465VgCtgTt6565B.1.1.2740.328283
ORF1ab/nsp3465A465VgCtgTt6464AY.4.10.047198
ORF1ab/nsp3465A465VgCtgTt5858AY.9.20.00213
ORF1ab/nsp3465A465VgCtgTt5858B.1.10.001052
ORF1ab/nsp3465A465VgCtgTt5757AY.1000.002622
ORF1ab/nsp3465A465VgCtgTt5656AY.1180.003508
ORF1ab/nsp3465A465VgCtgTt5454AY.290.000852
ORF1ab/nsp3465A465VgCtgTt5454B.1.6370.003946
ORF1ab/nsp3465A465AgcTgcC5053B.1.1.70.000045
ORF1ab/nsp3465A465AgcTgcG353B.1.1.70.000003
ORF1ab/nsp3465A465VgCtgTt5252B.1.2430.003618
ORF1ab/nsp3465A465VgCtgTt4848AY.390.001186
ORF1ab/nsp3465A465VgCtgTt4747AY.1200.001747
ORF1ab/nsp3465A465VgCtgTt4444AY.750.002465
ORF1ab/nsp3465A465VgCtgTt4343B.1.2210.003054
ORF1ab/nsp3465A465VgCtgTt4242B.1.4290.000988
ORF1ab/nsp3465A465VgCtgTt4141AY.330.002738
ORF1ab/nsp3465A465VgCtgTt4141B.1.619.10.026299
ORF1ab/nsp3465A465VgCtgTt4040B.1.3510.001189
ORF1ab/nsp3465A465VgCtgTt3737Q.80.006102
ORF1ab/nsp3465A465TGctAct3636B.1.1.70.000032
ORF1ab/nsp3465A465DgCtgAt3434All0.000007
ORF1ab/nsp3465A465VgCtgTt3434P.1.10.010801
ORF1ab/nsp3465A465VgCtgTt3131B.1.1.250.017624
ORF1ab/nsp3465A465VgCtgTt3030AY.50.000619
ORF1ab/nsp3465A465VgCtgTt3030B.1.1.2630.046729
ORF1ab/nsp3465A465AgcTgcC2929AY.430.000128
ORF1ab/nsp3465A465VgCtgTt2929B.1.1.4340.010108
ORF1ab/nsp3465A465VgCtgTt2929B.1.2400.006251
ORF1ab/nsp3465A465VgCtgTt2727AY.900.01848
ORF1ab/nsp3465A465VgCtgTt2626B.1.1600.000811
ORF1ab/nsp3465A465delGCT---2525All0.000005
ORF1ab/nsp3465A465AgcTgcC2525AY.30.000249
ORF1ab/nsp3465A465VgCtgTt2525AY.470.000778
ORF1ab/nsp3465A465VgCtgTt2525B.1.1.4830.961538
ORF1ab/nsp3465A465AgcTgcC2325B.1.617.20.000087
ORF1ab/nsp3465A465AgcTgcG225B.1.617.20.000008
ORF1ab/nsp3465A465VgCtgTt2424AY.1170.002028
ORF1ab/nsp3465A465AgcTgcC2424B.1.4290.000565
ORF1ab/nsp3465A465VgCtgTt2222B.1.6210.001947
ORF1ab/nsp3465A465VgCtgTt2121AY.99.20.001935
ORF1ab/nsp3465A465VgCtgTt2121B.1.1.1960.12
ORF1ab/nsp3465A465SGctTct2121B.1.1.70.000019
ORF1ab/nsp3465A465VgCtgTt2020B.1.5170.00854
ORF1ab/nsp3465A465VgCtgTt1919B.1.36.360.011439
ORF1ab/nsp3465A465VgCtgTt1818A.23.10.012676
ORF1ab/nsp3465A465VgCtgTt1818AY.140.001584
ORF1ab/nsp3465A465VgCtgTt1818AY.340.001745
ORF1ab/nsp3465A465VgCtgTt1818AY.39.10.000713
ORF1ab/nsp3465A465VgCtgTt1818P.1.120.008712
ORF1ab/nsp3465A465VgCtgTt1717AY.46.30.015873
ORF1ab/nsp3465A465VgCtgTt1717B.1.1.460.074236
ORF1ab/nsp3465A465VgCtgTt1717B.1.177.40.003588
ORF1ab/nsp3465A465VgCtgTt1717P.1.150.00395
ORF1ab/nsp3465A465AgcTgcC1516B.1.20.000132
ORF1ab/nsp3465A465AgcTgcA116B.1.20.000009
ORF1ab/nsp3465A465VgCtgTt1616B.1.5090.013853
ORF1ab/nsp3465A465VgCtgTt1616B.1.5960.001394
ORF1ab/nsp3465A465VgCtgTt1515B.1.177.600.003277
ORF1ab/nsp3465A465VgCtgTt1414AY.1060.004689
ORF1ab/nsp3465A465VgCtgTt1414AY.530.004025
ORF1ab/nsp3465A465VgCtgTt1414B.1.1.5190.000556
ORF1ab/nsp3465A465TGctAct1414B.1.160.160.013011
ORF1ab/nsp3465A465AgcTgcC1013AY.250.00006
ORF1ab/nsp3465A465AgcTgcA213AY.250.000012
ORF1ab/nsp3465A465AgcTgcG113AY.250.000006
ORF1ab/nsp3465A465VgCtgTt1313B.1.1.330.005471
ORF1ab/nsp3465A465VgCtgTt1313B.1.177.160.008638
ORF1ab/nsp3465A465VgCtgTt1212A.2.50.005988
ORF1ab/nsp3465A465VgCtgTt1212AY.1190.000424
ORF1ab/nsp3465A465DgCtgAt1212B.1.20.000106
ORF1ab/nsp3465A465VgCtgTt1212B.1.3830.108108
ORF1ab/nsp3465A465VgCtgTt1212B.1.5860.131868
ORF1ab/nsp3465A465TGctAct1212B.1.617.20.000045
ORF1ab/nsp3465A465VgCtgTt1111AY.120.10.003531
ORF1ab/nsp3465A465VgCtgTt1111AY.98.10.000533
ORF1ab/nsp3465A465VgCtgTt1111B.1.258.140.010784
ORF1ab/nsp3465A465VgCtgTt1111C.36.30.006239
ORF1ab/nsp3465A465VgCtgTt1111Q.10.00139
ORF1ab/nsp3465A465VgCtgTt1010AY.1130.001424
ORF1ab/nsp3465A465VgCtgTt1010AY.230.000697
ORF1ab/nsp3465A465VgCtgTt1010AY.260.000283
ORF1ab/nsp3465A465DgCtgAt1010AY.40.000016
ORF1ab/nsp3465A465VgCtgTt1010B.1.1.500.006789
ORF1ab/nsp3465A465VgCtgTt1010B.1.2580.000665
ORF1ab/nsp3465A465VgCtgTt1010B.1.258.240.107527
ORF1ab/nsp3465A465VgCtgTt1010B.1.3100.47619
ORF1ab/nsp3465A465VgCtgTt1010B.1.438.10.001073
ORF1ab/nsp3465A465VgCtgTt99AY.3.10.000767
ORF1ab/nsp3465A465VgCtgTt99AY.4.20.000195
ORF1ab/nsp3465A465AgcTgcC99AY.440.000055
ORF1ab/nsp3465A465VgCtgTt99AY.450.001095
ORF1ab/nsp3465A465VgCtgTt99B.1.177.810.001704
ORF1ab/nsp3465A465VgCtgTt99B.1.214.20.005396
ORF1ab/nsp3465A465VgCtgTt88AY.46.60.000578
ORF1ab/nsp3465A465VgCtgTt88B.1.6090.003835
ORF1ab/nsp3465A465VgCtgTt88B.1.617.10.001032
ORF1ab/nsp3465A465VgCtgTt88P.1.140.000382
ORF1ab/nsp3465A465AgcTgcC77A.2.50.003493
ORF1ab/nsp3465A465GgCtgGt77All0.000001
ORF1ab/nsp3465A465PGctCct77All0.000001
ORF1ab/nsp3465A465SGctTct77AY.230.000488
ORF1ab/nsp3465A465VgCtgTt77AY.4.2.10.001043
ORF1ab/nsp3465A465SGctTct77AY.46.40.001152
ORF1ab/nsp3465A465VgCtgTt77AY.80.004242
ORF1ab/nsp3465A465SGctTct77AY.9.10.000586
ORF1ab/nsp3465A465VgCtgTt77AY.920.002011
ORF1ab/nsp3465A465VgCtgTt77B.1.1.280.002179
ORF1ab/nsp3465A465VgCtgTt77B.1.1.3270.7
ORF1ab/nsp3465A465delGCT---77B.1.1.70.000006
ORF1ab/nsp3465A465VgCtgTt66AY.1070.002796
ORF1ab/nsp3465A465VgCtgTt66AY.1080.006615
ORF1ab/nsp3465A465VgCtgTt66AY.1100.000676
ORF1ab/nsp3465A465VgCtgTt66AY.1210.000812
ORF1ab/nsp3465A465SGctTct66AY.40.000009
ORF1ab/nsp3465A465VgCtgTt66AY.540.000572
ORF1ab/nsp3465A465VgCtgTt66AY.90.000406
ORF1ab/nsp3465A465VgCtgTt66B.1.466.20.002347
ORF1ab/nsp3465A465VgCtgTt66B.1.5880.00546
ORF1ab/nsp3465A465VgCtgTt66R.10.00054
ORF1ab/nsp3465A465VgCtgTt55AY.200.000194
ORF1ab/nsp3465A465TGctAct55AY.750.00028
ORF1ab/nsp3465A465VgCtgTt55AY.75.10.000902
ORF1ab/nsp3465A465VgCtgTt55AY.980.000395
ORF1ab/nsp3465A465SGctTct55B.10.000046
ORF1ab/nsp3465A465SGctTct55B.1.10.000091
ORF1ab/nsp3465A465VgCtgTt55B.1.1.1760.002197
ORF1ab/nsp3465A465VgCtgTt55B.1.1.370.000964
ORF1ab/nsp3465A465VgCtgTt55B.1.160.260.012107
ORF1ab/nsp3465A465VgCtgTt55B.1.177.440.002595
ORF1ab/nsp3465A465VgCtgTt55B.1.2340.00066
ORF1ab/nsp3465A465VgCtgTt55B.1.360.00073
ORF1ab/nsp3465A465VgCtgTt55B.1.36.290.002587
ORF1ab/nsp3465A465VgCtgTt55B.1.36.80.005
ORF1ab/nsp3465A465SGctTct45D.20.0003
ORF1ab/nsp3465A465SGcTTcC15D.20.000075
ORF1ab/nsp3465A465VgCtgTt44AY.10.001583
ORF1ab/nsp3465A465AgcTgcG24AY.1030.000012
ORF1ab/nsp3465A465AgcTgcC24AY.1030.000012
ORF1ab/nsp3465A465VgCtgTt44AY.160.001519
ORF1ab/nsp3465A465VgCtgTt44AY.360.000593
ORF1ab/nsp3465A465VgCtgTt44AY.60.000165
ORF1ab/nsp3465A465VgCtgTt44AY.710.0019
ORF1ab/nsp3465A465VgCtgTt44AY.840.00175
ORF1ab/nsp3465A465VgCtgTt44AY.850.001709
ORF1ab/nsp3465A465VgCtgTt44B0.000511
ORF1ab/nsp3465A465VgCtgTt44B.1.1.2220.000816
ORF1ab/nsp3465A465VgCtgTt44B.1.1.2310.012384
ORF1ab/nsp3465A465VgCtgTt44B.1.1.3110.001433
ORF1ab/nsp3465A465TGctAct44B.1.1.3260.007042
ORF1ab/nsp3465A465VgCtgTt44B.1.177.190.005722
ORF1ab/nsp3465A465VgCtgTt44B.1.3260.030303
ORF1ab/nsp3465A465VgCtgTt44B.1.36.180.001681
ORF1ab/nsp3465A465VgCtgTt44B.1.3620.006163
ORF1ab/nsp3465A465VgCtgTt44B.1.4060.024242
ORF1ab/nsp3465A465VgCtgTt44B.1.4530.012945
ORF1ab/nsp3465A465GgCtgGt44B.1.617.20.000015
ORF1ab/nsp3465A465DgCtgAt44R.10.00036
ORF1ab/nsp3465A465AgcTgcC33AD.20.000657
ORF1ab/nsp3465A465VgCtgTt33AY.1040.005952
ORF1ab/nsp3465A465VgCtgTt33AY.1160.00086
ORF1ab/nsp3465A465VgCtgTt33AY.350.000699
ORF1ab/nsp3465A465TGctAct33AY.40.000005
ORF1ab/nsp3465A465VgCtgTt33AY.4.50.000322
ORF1ab/nsp3465A465VgCtgTt33AY.420.000121
ORF1ab/nsp3465A465VgCtgTt33AY.460.000312
ORF1ab/nsp3465A465AgcTgcG33AY.460.000312
ORF1ab/nsp3465A465VgCtgTt33AY.5.40.00083
ORF1ab/nsp3465A465TGctAct33AY.5.40.00083
ORF1ab/nsp3465A465VgCtgTt33AY.570.001969
ORF1ab/nsp3465A465VgCtgTt33AY.620.001307
ORF1ab/nsp3465A465VgCtgTt33AY.7.10.000338
ORF1ab/nsp3465A465VgCtgTt33AY.730.001996
ORF1ab/nsp3465A465VgCtgTt33AY.740.000347
ORF1ab/nsp3465A465VgCtgTt33AY.9.10.000251
ORF1ab/nsp3465A465SGctTct33AZ.10.002602
ORF1ab/nsp3465A465VgCtgTt33AZ.30.004559
ORF1ab/nsp3465A465AgcTgcC33B.10.000027
ORF1ab/nsp3465A465delGCT---33B.10.000027
ORF1ab/nsp3465A465VgCtgTt33B.1.1.1700.003741
ORF1ab/nsp3465A465VgCtgTt33B.1.1.2140.000166
ORF1ab/nsp3465A465VgCtgTt33B.1.1.700.001023
ORF1ab/nsp3465A465VgCtgTt33B.1.1.890.018182
ORF1ab/nsp3465A465del1gCtg-t33B.1.177.820.001432
ORF1ab/nsp3465A465VgCtgTt33B.1.177.860.00055
ORF1ab/nsp3465A465VgCtgTt33B.1.2390.003663
ORF1ab/nsp3465A465del1gCtg-t33B.1.3510.000089
ORF1ab/nsp3465A465VgCtgTt33B.1.351.30.002629
ORF1ab/nsp3465A465VgCtgTt33B.1.416.10.004687
ORF1ab/nsp3465A465VgCtgTt33B.1.5250.000339
ORF1ab/nsp3465A465VgCtgTt33B.1.5750.00091
ORF1ab/nsp3465A465VgCtgTt33B.1.6230.001609
ORF1ab/nsp3465A465AgcTgcC33D.20.000225
ORF1ab/nsp3465A465AgcTgcC23P.10.000032
ORF1ab/nsp3465A465AgcTgcG13P.10.000016
ORF1ab/nsp3465A465SGctTct33P.50.041096
ORF1ab/nsp3465A465IGCtATt120.055556
ORF1ab/nsp3465A465IGCTATC120.055556
ORF1ab/nsp3465A465VgCtgTt120.055556
ORF1ab/nsp3465A465TGctAct120.055556
ORF1ab/nsp3465A465VgCTgTC120.055556
ORF1ab/nsp3465A465TGcTAcC120.055556
ORF1ab/nsp3465A465IGCTATC12All0
ORF1ab/nsp3465A465IGCtATt12All0
ORF1ab/nsp3465A465VgCtgTt22AU.30.004219
ORF1ab/nsp3465A465AgcTgcC22AY.1020.000053
ORF1ab/nsp3465A465TGctAct22AY.1030.000012
ORF1ab/nsp3465A465VgCtgTt22AY.1050.001286
ORF1ab/nsp3465A465VgCtgTt22AY.1150.010417
ORF1ab/nsp3465A465TGctAct22AY.1170.000169
ORF1ab/nsp3465A465SGctTct22AY.1180.000125
ORF1ab/nsp3465A465TGctAct22AY.30.00002
ORF1ab/nsp3465A465VgCtgTt22AY.380.000999
ORF1ab/nsp3465A465VgCtgTt22AY.4.30.001684
ORF1ab/nsp3465A465GgCtgGt22AY.440.000012
ORF1ab/nsp3465A465TGctAct22AY.440.000012
ORF1ab/nsp3465A465VgCtgTt22AY.46.20.001271
ORF1ab/nsp3465A465TGctAct22AY.46.30.001867
ORF1ab/nsp3465A465AgcTgcC22AY.46.40.000329
ORF1ab/nsp3465A465TGctAct22AY.470.000062
ORF1ab/nsp3465A465AgcTgcC22AY.470.000062
ORF1ab/nsp3465A465del1gCtg-t22AY.520.001629
ORF1ab/nsp3465A465VgCtgTt22AY.590.001059
ORF1ab/nsp3465A465VgCtgTt22AY.610.00021
ORF1ab/nsp3465A465VgCtgTt22AY.690.000373
ORF1ab/nsp3465A465VgCtgTt22AY.700.000417
ORF1ab/nsp3465A465VgCtgTt22AY.810.003984
ORF1ab/nsp3465A465VgCtgTt22B.1.1.1530.002191
ORF1ab/nsp3465A465AgcTgcC22B.1.1.1590.009346
ORF1ab/nsp3465A465VgCtgTt22B.1.1.2200.003717
ORF1ab/nsp3465A465VgCtgTt22B.1.1.2840.000215
ORF1ab/nsp3465A465VgCtgTt22B.1.1.2940.002532
ORF1ab/nsp3465A465VgCtgTt22B.1.1.3060.000877
ORF1ab/nsp3465A465VgCtgTt22B.1.1.3510.005587
ORF1ab/nsp3465A465VgCtgTt22B.1.1.4200.002012
ORF1ab/nsp3465A465VgCtgTt22B.1.1.630.000772
ORF1ab/nsp3465A465VgCtgTt22B.1.1260.002551
ORF1ab/nsp3465A465del1gCtg-t22B.1.1600.000062
ORF1ab/nsp3465A465AgcTgcG22B.1.1770.000026
ORF1ab/nsp3465A465DgCtgAt22B.1.1770.000026
ORF1ab/nsp3465A465VgCtgTt22B.1.177.430.002954
ORF1ab/nsp3465A465VgCtgTt22B.1.177.570.000562
ORF1ab/nsp3465A465VgCtgTt22B.1.177.650.001331
ORF1ab/nsp3465A465AgcTgcC22B.1.1870.066667
ORF1ab/nsp3465A465SGctTct22B.1.20.000018
ORF1ab/nsp3465A465VgCtgTt22B.1.3320.006993
ORF1ab/nsp3465A465VgCtgTt22B.1.36.170.000988
ORF1ab/nsp3465A465AgcTgcC22B.1.3980.005952
ORF1ab/nsp3465A465VgCtgTt22B.1.428.30.025641
ORF1ab/nsp3465A465VgCtgTt22B.1.466.10.014388
ORF1ab/nsp3465A465AgcTgcC22B.1.5610.000794
ORF1ab/nsp3465A465VgCtgTt22B.1.5760.001813
ORF1ab/nsp3465A465SGctTct22B.1.617.20.000008
ORF1ab/nsp3465A465VgCtgTt22B.1.780.017094
ORF1ab/nsp3465A465VgCtgTt22C.260.014706
ORF1ab/nsp3465A465VgCtgTt22D.20.00015
ORF1ab/nsp3465A465DgCtgAt22P.10.000032
ORF1ab/nsp3465A465VgCtgTt22Q.30.00029
ORF1ab/nsp3465A465AgcTgcC22W.40.002703
ORF1ab/nsp3465A465AgcTgcC110.055556
ORF1ab/nsp3465A465VgCtgTt11A0.000387
ORF1ab/nsp3465A465VgCtgTt11A.10.000282
ORF1ab/nsp3465A465VgCtgTt11A.20.000662
ORF1ab/nsp3465A465VgCtgTt11A.50.001923
ORF1ab/nsp3465A465VgCtgTt11AD.10.004115
ORF1ab/nsp3465A465VgCtgTt11AD.20.000219
ORF1ab/nsp3465A465del2gCTg--11All0
ORF1ab/nsp3465A465VgCtgTt11AY.100.00053
ORF1ab/nsp3465A465AgcTgcG11AY.1000.000046
ORF1ab/nsp3465A465VgCtgTt11AY.1010.00049
ORF1ab/nsp3465A465DgCtgAt11AY.1020.000027
ORF1ab/nsp3465A465PGctCct11AY.1030.000006
ORF1ab/nsp3465A465VgCtgTt11AY.1090.00074
ORF1ab/nsp3465A465TGctAct11AY.1130.000142
ORF1ab/nsp3465A465AgcTgcC11AY.1170.000085
ORF1ab/nsp3465A465delGCT---11AY.1200.000037
ORF1ab/nsp3465A465VgCtgTt11AY.120.20.001285
ORF1ab/nsp3465A465VgCtgTt11AY.120.2.10.000498
ORF1ab/nsp3465A465AgcTgcC11AY.200.000039
ORF1ab/nsp3465A465VgCtgTt11AY.220.002092
ORF1ab/nsp3465A465AgcTgcC11AY.230.00007
ORF1ab/nsp3465A465SGctTct11AY.250.000006
ORF1ab/nsp3465A465VgCtgTt11AY.270.000065
ORF1ab/nsp3465A465TGctAct11AY.290.000016
ORF1ab/nsp3465A465AgcTgcC11AY.290.000016
ORF1ab/nsp3465A465VgCtgTt11AY.29.10.000221
ORF1ab/nsp3465A465SGctTct11AY.29.10.000221
ORF1ab/nsp3465A465SGctTct11AY.3.10.000085
ORF1ab/nsp3465A465VgCtgTt11AY.300.000396
ORF1ab/nsp3465A465VgCtgTt11AY.320.000532
ORF1ab/nsp3465A465AgcTgcC11AY.330.000067
ORF1ab/nsp3465A465SGctTct11AY.340.000097
ORF1ab/nsp3465A465VgCtgTt11AY.34.10.00051
ORF1ab/nsp3465A465AgcTgcG11AY.370.000316
ORF1ab/nsp3465A465AgcTgcC11AY.390.000025
ORF1ab/nsp3465A465DgCtgAt11AY.4.20.000022
ORF1ab/nsp3465A465delGCT---11AY.4.50.000107
ORF1ab/nsp3465A465SGctTct11AY.420.00004
ORF1ab/nsp3465A465AgcTgcC11AY.420.00004
ORF1ab/nsp3465A465SGctTct11AY.430.000004
ORF1ab/nsp3465A465delGCT---11AY.430.000004
ORF1ab/nsp3465A465SGctTct11AY.440.000006
ORF1ab/nsp3465A465AgcTgcA11AY.450.000122
ORF1ab/nsp3465A465PGctCct11AY.46.50.000198
ORF1ab/nsp3465A465delGCT---11AY.46.60.000072
ORF1ab/nsp3465A465VgCtgTt11AY.480.000465
ORF1ab/nsp3465A465AgcTgcA11AY.50.000021
ORF1ab/nsp3465A465VgCtgTt11AY.5.20.002463
ORF1ab/nsp3465A465SGctTct11AY.5.30.000337
ORF1ab/nsp3465A465VgCtgTt11AY.510.000909
ORF1ab/nsp3465A465AgcTgcC11AY.60.000041
ORF1ab/nsp3465A465AgcTgcC11AY.610.000105
ORF1ab/nsp3465A465VgCtgTt11AY.650.000533
ORF1ab/nsp3465A465delGCT---11AY.670.000464
ORF1ab/nsp3465A465VgCtgTt11AY.70.000196
ORF1ab/nsp3465A465AgcTgcC11AY.710.000475
ORF1ab/nsp3465A465VgCtgTt11AY.720.001361
ORF1ab/nsp3465A465SGctTct11AY.750.000056
ORF1ab/nsp3465A465VgCtgTt11AY.760.004831
ORF1ab/nsp3465A465AgcTgcC11AY.820.001357
ORF1ab/nsp3465A465VgCtgTt11AY.820.001357
ORF1ab/nsp3465A465AgcTgcC11AY.910.00073
ORF1ab/nsp3465A465SGctTct11AY.950.000761
ORF1ab/nsp3465A465TGctAct11AY.98.10.000048
ORF1ab/nsp3465A465del2gCTg--11AY.99.20.000092
ORF1ab/nsp3465A465PGctCct11B0.000128
ORF1ab/nsp3465A465del1gCtg-t11B0.000128
ORF1ab/nsp3465A465GgCtgGt11B.10.000009
ORF1ab/nsp3465A465AgcTgcC11B.1.10.000018
ORF1ab/nsp3465A465TGctAct11B.1.10.000018
ORF1ab/nsp3465A465VgCtgTt11B.1.1.10.000327
ORF1ab/nsp3465A465VgCtgTt11B.1.1.100.001115
ORF1ab/nsp3465A465VgCtgTt11B.1.1.1570.000913
ORF1ab/nsp3465A465AgcTgcG11B.1.1.1710.003676
ORF1ab/nsp3465A465VgCtgTt11B.1.1.1890.001513
ORF1ab/nsp3465A465VgCtgTt11B.1.1.1920.002309
ORF1ab/nsp3465A465VgCtgTt11B.1.1.2070.001182
ORF1ab/nsp3465A465AgcTgcC11B.1.1.2140.000055
ORF1ab/nsp3465A465VgCtgTt11B.1.1.2160.00089
ORF1ab/nsp3465A465VgCtgTt11B.1.1.2190.005
ORF1ab/nsp3465A465VgCtgTt11B.1.1.2340.012048
ORF1ab/nsp3465A465VgCtgTt11B.1.1.2580.003257
ORF1ab/nsp3465A465VgCtgTt11B.1.1.3090.005848
ORF1ab/nsp3465A465SGctTct11B.1.1.3180.000302
ORF1ab/nsp3465A465SGctTct11B.1.1.330.000421
ORF1ab/nsp3465A465AgcTgcG11B.1.1.330.000421
ORF1ab/nsp3465A465VgCtgTt11B.1.1.3330.001076
ORF1ab/nsp3465A465VgCtgTt11B.1.1.3350.012987
ORF1ab/nsp3465A465VgCtgTt11B.1.1.3720.000689
ORF1ab/nsp3465A465VgCtgTt11B.1.1.390.00051
ORF1ab/nsp3465A465VgCtgTt11B.1.1.40.002976
ORF1ab/nsp3465A465VgCtgTt11B.1.1.4090.002833
ORF1ab/nsp3465A465AgcTgcC11B.1.1.4090.002833
ORF1ab/nsp3465A465VgCtgTt11B.1.1.4120.007634
ORF1ab/nsp3465A465VgCtgTt11B.1.1.4130.006897
ORF1ab/nsp3465A465VgCtgTt11B.1.1.4330.001425
ORF1ab/nsp3465A465VgCtgTt11B.1.1.4640.001473
ORF1ab/nsp3465A465VgCtgTt11B.1.1.5170.006803
ORF1ab/nsp3465A465delGCT---11B.1.1.5190.00004
ORF1ab/nsp3465A465PGctCct11B.1.1.5190.00004
ORF1ab/nsp3465A465VgCtgTt11B.1.1.540.003021
ORF1ab/nsp3465A465VgCtgTt11B.1.1050.009615
ORF1ab/nsp3465A465VgCtgTt11B.1.1100.004525
ORF1ab/nsp3465A465VgCtgTt11B.1.1280.000635
ORF1ab/nsp3465A465VgCtgTt11B.1.160.120.00641
ORF1ab/nsp3465A465VgCtgTt11B.1.160.160.000929
ORF1ab/nsp3465A465VgCtgTt11B.1.160.250.011111
ORF1ab/nsp3465A465VgCtgTt11B.1.1640.014925
ORF1ab/nsp3465A465AgcTgcC11B.1.1700.00431
ORF1ab/nsp3465A465TGctAct11B.1.1770.000013
ORF1ab/nsp3465A465SGctTct11B.1.1770.000013
ORF1ab/nsp3465A465VgCtgTt11B.1.177.150.000631
ORF1ab/nsp3465A465delGCT---11B.1.177.160.000664
ORF1ab/nsp3465A465VgCtgTt11B.1.177.180.00116
ORF1ab/nsp3465A465AgcTgcC11B.1.177.40.000211
ORF1ab/nsp3465A465delGCT---11B.1.177.40.000211
ORF1ab/nsp3465A465VgCtgTt11B.1.177.420.000894
ORF1ab/nsp3465A465VgCtgTt11B.1.177.510.004566
ORF1ab/nsp3465A465VgCtgTt11B.1.177.540.000606
ORF1ab/nsp3465A465del1gCtg-t11B.1.177.60.000977
ORF1ab/nsp3465A465VgCtgTt11B.1.177.60.000977
ORF1ab/nsp3465A465VgCtgTt11B.1.177.690.001484
ORF1ab/nsp3465A465VgCtgTt11B.1.177.70.000165
ORF1ab/nsp3465A465VgCtgTt11B.1.177.80.000752
ORF1ab/nsp3465A465PGctCct11B.1.20.000009
ORF1ab/nsp3465A465delGCT---11B.1.2210.000071
ORF1ab/nsp3465A465DgCtgAt11B.1.2430.00007
ORF1ab/nsp3465A465VgCtgTt11B.1.2470.014925
ORF1ab/nsp3465A465VgCtgTt11B.1.3110.000275
ORF1ab/nsp3465A465AgcTgcA11B.1.3510.00003
ORF1ab/nsp3465A465SGctTct11B.1.3510.00003
ORF1ab/nsp3465A465VgCtgTt11B.1.351.20.000303
ORF1ab/nsp3465A465SGctTct11B.1.360.000146
ORF1ab/nsp3465A465delGCT---11B.1.360.000146
ORF1ab/nsp3465A465del1gCtg-t11B.1.36.10.00114
ORF1ab/nsp3465A465VgCtgTt11B.1.36.10.00114
ORF1ab/nsp3465A465VgCtgTt11B.1.36.270.000763
ORF1ab/nsp3465A465VgCtgTt11B.1.36.280.005747
ORF1ab/nsp3465A465VgCtgTt11B.1.36.390.002217
ORF1ab/nsp3465A465VgCtgTt11B.1.3670.000792
ORF1ab/nsp3465A465AgcTgcC11B.1.3750.00082
ORF1ab/nsp3465A465VgCtgTt11B.1.390.003906
ORF1ab/nsp3465A465VgCtgTt11B.1.4000.000429
ORF1ab/nsp3465A465VgCtgTt11B.1.4160.001269
ORF1ab/nsp3465A465VgCtgTt11B.1.4210.007463
ORF1ab/nsp3465A465delGCT---11B.1.4290.000024
ORF1ab/nsp3465A465DgCtgAt11B.1.4290.000024
ORF1ab/nsp3465A465VgCtgTt11B.1.4560.003268
ORF1ab/nsp3465A465VgCtgTt11B.1.4700.001404
ORF1ab/nsp3465A465VgCtgTt11B.1.4990.00105
ORF1ab/nsp3465A465VgCtgTt11B.1.5200.021739
ORF1ab/nsp3465A465AgcTgcC11B.1.5240.001406
ORF1ab/nsp3465A465VgCtgTt11B.1.5300.007143
ORF1ab/nsp3465A465VgCtgTt11B.1.5350.028571
ORF1ab/nsp3465A465VgCtgTt11B.1.5510.00129
ORF1ab/nsp3465A465VgCtgTt11B.1.5670.003333
ORF1ab/nsp3465A465VgCtgTt11B.1.5800.004065
ORF1ab/nsp3465A465VgCtgTt11B.1.5950.000261
ORF1ab/nsp3465A465VgCtgTt11B.1.6000.005848
ORF1ab/nsp3465A465VgCtgTt11B.1.6010.030303
ORF1ab/nsp3465A465del1gcTgc-11B.1.6090.000479
ORF1ab/nsp3465A465AgcTgcG11B.1.6210.000089
ORF1ab/nsp3465A465VgCtgTt11B.1.6250.002353
ORF1ab/nsp3465A465VgCtgTt11B.1.6280.000352
ORF1ab/nsp3465A465AgcTgcC11B.1.6370.000073
ORF1ab/nsp3465A465VgCtgTt11B.1.700.02439
ORF1ab/nsp3465A465VgCtgTt11B.290.003509
ORF1ab/nsp3465A465PGctCct11B.310.003731
ORF1ab/nsp3465A465VgCtgTt11B.380.02381
ORF1ab/nsp3465A465VgCtgTt11B.400.000364
ORF1ab/nsp3465A465AgcTgcG11B.550.00295
ORF1ab/nsp3465A465delGCT---11B.570.015152
ORF1ab/nsp3465A465VgCtgTt11C.160.00106
ORF1ab/nsp3465A465AgcTgcC11C.370.000116
ORF1ab/nsp3465A465VgCtgTt11C.37.10.002618
ORF1ab/nsp3465A465PGctCct11D.20.000075
ORF1ab/nsp3465A465VgCtgTt11N.50.001767
ORF1ab/nsp3465A465delGCT---11P.10.000016
ORF1ab/nsp3465A465SGctTct11P.10.000016
ORF1ab/nsp3465A465VgCtgTt11P.1.160.000374
ORF1ab/nsp3465A465VgCtgTt11P.1.170.000162
ORF1ab/nsp3465A465VgCtgTt11P.1.20.001156
ORF1ab/nsp3465A465VgCtgTt11P.1.70.000319
ORF1ab/nsp3465A465VgCtgTt11P.20.000187
ORF1ab/nsp3465A465VgCtgTt11P.70.004367
ORF1ab/nsp3465A465del1gcTgc-11Q.20.000613
ORF1ab/nsp3465A465del1gCtg-t11R.10.00009
ORF1ab/nsp3465A465delGCT---11R.10.00009
ORF1ab/nsp3465A465delGCT---11U.30.003861
ORF1ab/nsp3465A465VgCtgTt11W.40.001351