CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF1ab/nsp3 : CodonNum = 463

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF1ab/nsp3463K463QK1281QnonsynAaaCaa1332133214106-4108
ORF1ab/nsp3463K463KK1281KsynaaAaaG35335314106-4108
ORF1ab/nsp3463K463TK1281TnonsynaAaaCa11511514106-4108
ORF1ab/nsp3463K463EK1281EnonsynAaaGaa959514106-4108
ORF1ab/nsp3463K463RK1281RnonsynaAaaGa909014106-4108
ORF1ab/nsp3463K463NK1281NnonsynaaAaaC88540.6136364106-4108
ORF1ab/nsp3463K463NK1281NnonsynaaAaaT88340.3863644106-4108
ORF1ab/nsp3463K463delK1281deldelAAA---242414106-4108
ORF1ab/nsp3463K463del1K1281del1delAaa-aa1090.94106-4108
ORF1ab/nsp3463K463del1K1281del1delaaAaa-1010.14106-4108
ORF1ab/nsp3463K463IK1281InonsynaAaaTa3314106-4108
ORF1ab/nsp3463K463del2K1281del2delAAa--a1114106-4108
ORF1ab/nsp3463K463XK1281XnonsynAaaTaa1114106-4108
ORF1ab/nsp3463K463GK1281GnonsynAAaGGa1114106-4108
ORF1ab/nsp3463K463AK1281AnonsynAAaGCa1114106-4108

Details of the mutation no within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF1ab/nsp3463K463QAaaCaa13321332All0.000255
ORF1ab/nsp3463K463QAaaCaa12621262B.1.5260.029663
ORF1ab/nsp3463K463KaaAaaG353353All0.000068
ORF1ab/nsp3463K463KaaAaaG169169B.1.1.2430.689796
ORF1ab/nsp3463K463TaAaaCa115115All0.000022
ORF1ab/nsp3463K463EAaaGaa9595All0.000018
ORF1ab/nsp3463K463RaAaaGa9090All0.000017
ORF1ab/nsp3463K463NaaAaaC5488All0.00001
ORF1ab/nsp3463K463NaaAaaT3488All0.000007
ORF1ab/nsp3463K463TaAaaCa8888AY.440.000536
ORF1ab/nsp3463K463KaaAaaG4545AY.840.019685
ORF1ab/nsp3463K463KaaAaaG2626AY.40.00004
ORF1ab/nsp3463K463delAAA---2424All0.000005
ORF1ab/nsp3463K463KaaAaaG2323B.1.1.70.000021
ORF1ab/nsp3463K463NaaAaaT2222P.1.120.010649
ORF1ab/nsp3463K463NaaAaaC2121B.1.1.70.000019
ORF1ab/nsp3463K463EAaaGaa1919B.1.1160.22093
ORF1ab/nsp3463K463QAaaCaa1818AY.30.000179
ORF1ab/nsp3463K463RaAaaGa1818B.1.1.70.000016
ORF1ab/nsp3463K463KaaAaaG1616AY.440.000097
ORF1ab/nsp3463K463EAaaGaa1515AY.750.00084
ORF1ab/nsp3463K463RaAaaGa1313AY.1130.001851
ORF1ab/nsp3463K463TaAaaCa1111B.1.617.20.000041
ORF1ab/nsp3463K463del1Aaa-aa910All0.000002
ORF1ab/nsp3463K463del1aaAaa-110All0
ORF1ab/nsp3463K463EAaaGaa1010B.1.2400.002156
ORF1ab/nsp3463K463EAaaGaa99AY.90.000608
ORF1ab/nsp3463K463RaAaaGa99B.1.1770.000119
ORF1ab/nsp3463K463KaaAaaG99B.1.3510.000268
ORF1ab/nsp3463K463RaAaaGa88AY.30.00008
ORF1ab/nsp3463K463QAaaCaa88B.1.20.00007
ORF1ab/nsp3463K463KaaAaaG77AE.80.003423
ORF1ab/nsp3463K463QAaaCaa77AY.250.000042
ORF1ab/nsp3463K463delAAA---77B.1.1.70.000006
ORF1ab/nsp3463K463QAaaCaa66AY.200.000233
ORF1ab/nsp3463K463TaAaaCa66B.1.4330.019169
ORF1ab/nsp3463K463QAaaCaa55AY.1020.000133
ORF1ab/nsp3463K463KaaAaaG55AY.430.000022
ORF1ab/nsp3463K463EAaaGaa55B.10.000046
ORF1ab/nsp3463K463RaAaaGa55B.1.5260.000118
ORF1ab/nsp3463K463KaaAaaG55B.1.617.20.000019
ORF1ab/nsp3463K463KaaAaaG55B.1.6210.000443
ORF1ab/nsp3463K463KaaAaaG55P.10.000079
ORF1ab/nsp3463K463QAaaCaa44AY.430.000018
ORF1ab/nsp3463K463KaaAaaG44AY.98.10.000194
ORF1ab/nsp3463K463RaAaaGa44B.10.000037
ORF1ab/nsp3463K463QAaaCaa44B.10.000037
ORF1ab/nsp3463K463RaAaaGa44B.1.1.2280.012195
ORF1ab/nsp3463K463EAaaGaa44B.1.1.70.000004
ORF1ab/nsp3463K463NaaAaaC44B.1.3510.000119
ORF1ab/nsp3463K463NaaAaaT44B.1.4290.000094
ORF1ab/nsp3463K463NaaAaaC44C.160.004242
ORF1ab/nsp3463K463IaAaaTa33All0.000001
ORF1ab/nsp3463K463RaAaaGa33AY.440.000018
ORF1ab/nsp3463K463RaAaaGa33AY.9.10.000251
ORF1ab/nsp3463K463del1Aaa-aa33B.10.000027
ORF1ab/nsp3463K463delAAA---33B.10.000027
ORF1ab/nsp3463K463KaaAaaG33B.1.10.000054
ORF1ab/nsp3463K463NaaAaaT33B.1.1.5190.000119
ORF1ab/nsp3463K463QAaaCaa33B.1.1.70.000003
ORF1ab/nsp3463K463TaAaaCa33B.1.1.70.000003
ORF1ab/nsp3463K463KaaAaaG33B.1.416.10.004687
ORF1ab/nsp3463K463KaaAaaG33B.1.780.025641
ORF1ab/nsp3463K463EAaaGaa33P.10.000047
ORF1ab/nsp3463K463QAaaCaa33P.1.70.000958
ORF1ab/nsp3463K463RaAaaGa22AY.1030.000012
ORF1ab/nsp3463K463TaAaaCa22AY.1030.000012
ORF1ab/nsp3463K463KaaAaaG22AY.250.000012
ORF1ab/nsp3463K463RaAaaGa22AY.250.000012
ORF1ab/nsp3463K463KaaAaaG22AY.260.000057
ORF1ab/nsp3463K463NaaAaaC22AY.290.000032
ORF1ab/nsp3463K463TaAaaCa22AY.390.000049
ORF1ab/nsp3463K463NaaAaaC22AY.40.000003
ORF1ab/nsp3463K463EAaaGaa22AY.40.000003
ORF1ab/nsp3463K463RaAaaGa22AY.430.000009
ORF1ab/nsp3463K463QAaaCaa22AY.440.000012
ORF1ab/nsp3463K463EAaaGaa22AY.440.000012
ORF1ab/nsp3463K463NaaAaaC22AY.450.000243
ORF1ab/nsp3463K463NaaAaaC22AY.470.000062
ORF1ab/nsp3463K463EAaaGaa22B.1.10.000036
ORF1ab/nsp3463K463EAaaGaa22B.1.1.2220.000408
ORF1ab/nsp3463K463QAaaCaa22B.1.1.3120.003824
ORF1ab/nsp3463K463KaaAaaG22B.1.1.330.000842
ORF1ab/nsp3463K463RaAaaGa22B.1.1.630.000772
ORF1ab/nsp3463K463EAaaGaa22B.1.1600.000062
ORF1ab/nsp3463K463NaaAaaC22B.1.1600.000062
ORF1ab/nsp3463K463EAaaGaa22B.1.20.000018
ORF1ab/nsp3463K463IaAaaTa22B.1.2240.05
ORF1ab/nsp3463K463EAaaGaa22B.1.4280.002041
ORF1ab/nsp3463K463EAaaGaa22B.1.4410.019231
ORF1ab/nsp3463K463RaAaaGa22B.1.617.10.000258
ORF1ab/nsp3463K463NaaAaaC12B.1.617.20.000004
ORF1ab/nsp3463K463NaaAaaT12B.1.617.20.000004
ORF1ab/nsp3463K463del1Aaa-aa22B.1.6270.00404
ORF1ab/nsp3463K463NaaAaaC22R.20.028986
ORF1ab/nsp3463K463GAAaGGa110.055556
ORF1ab/nsp3463K463RaAaaGa110.055556
ORF1ab/nsp3463K463EAaaGaa110.055556
ORF1ab/nsp3463K463GAAaGGa11All0
ORF1ab/nsp3463K463del2AAa--a11All0
ORF1ab/nsp3463K463XAaaTaa11All0
ORF1ab/nsp3463K463AAAaGCa11All0
ORF1ab/nsp3463K463KaaAaaG11AY.1000.000046
ORF1ab/nsp3463K463EAaaGaa11AY.1020.000027
ORF1ab/nsp3463K463KaaAaaG11AY.1030.000006
ORF1ab/nsp3463K463RaAaaGa11AY.1060.000335
ORF1ab/nsp3463K463EAaaGaa11AY.116.10.000311
ORF1ab/nsp3463K463QAaaCaa11AY.1180.000063
ORF1ab/nsp3463K463KaaAaaG11AY.1200.000037
ORF1ab/nsp3463K463delAAA---11AY.1200.000037
ORF1ab/nsp3463K463NaaAaaT11AY.160.00038
ORF1ab/nsp3463K463EAaaGaa11AY.250.000006
ORF1ab/nsp3463K463NaaAaaT11AY.250.000006
ORF1ab/nsp3463K463TaAaaCa11AY.30.00001
ORF1ab/nsp3463K463KaaAaaG11AY.30.00001
ORF1ab/nsp3463K463NaaAaaC11AY.30.00001
ORF1ab/nsp3463K463KaaAaaG11AY.330.000067
ORF1ab/nsp3463K463EAaaGaa11AY.390.000025
ORF1ab/nsp3463K463QAaaCaa11AY.39.10.00004
ORF1ab/nsp3463K463del1Aaa-aa11AY.40.000002
ORF1ab/nsp3463K463QAaaCaa11AY.40.000002
ORF1ab/nsp3463K463RaAaaGa11AY.40.000002
ORF1ab/nsp3463K463del1aaAaa-11AY.4.50.000107
ORF1ab/nsp3463K463EAaaGaa11AY.430.000004
ORF1ab/nsp3463K463NaaAaaC11AY.430.000004
ORF1ab/nsp3463K463delAAA---11AY.430.000004
ORF1ab/nsp3463K463delAAA---11AY.46.60.000072
ORF1ab/nsp3463K463KaaAaaG11AY.470.000031
ORF1ab/nsp3463K463KaaAaaG11AY.510.000909
ORF1ab/nsp3463K463KaaAaaG11AY.520.000814
ORF1ab/nsp3463K463TaAaaCa11AY.550.000917
ORF1ab/nsp3463K463NaaAaaC11AY.60.000041
ORF1ab/nsp3463K463KaaAaaG11AY.610.000105
ORF1ab/nsp3463K463RaAaaGa11AY.610.000105
ORF1ab/nsp3463K463KaaAaaG11AY.650.000533
ORF1ab/nsp3463K463delAAA---11AY.670.000464
ORF1ab/nsp3463K463RaAaaGa11AY.90.000068
ORF1ab/nsp3463K463EAaaGaa11AY.9.20.000037
ORF1ab/nsp3463K463TaAaaCa11B.10.000009
ORF1ab/nsp3463K463NaaAaaC11B.10.000009
ORF1ab/nsp3463K463AAAaGCa11B.10.000009
ORF1ab/nsp3463K463KaaAaaG11B.1.1.1740.003378
ORF1ab/nsp3463K463KaaAaaG11B.1.1.1920.002309
ORF1ab/nsp3463K463RaAaaGa11B.1.1.2160.00089
ORF1ab/nsp3463K463KaaAaaG11B.1.1.2800.003086
ORF1ab/nsp3463K463KaaAaaG11B.1.1.3090.005848
ORF1ab/nsp3463K463RaAaaGa11B.1.1.3170.000412
ORF1ab/nsp3463K463EAaaGaa11B.1.1.3180.000302
ORF1ab/nsp3463K463NaaAaaC11B.1.1.370.000193
ORF1ab/nsp3463K463EAaaGaa11B.1.1.3720.000689
ORF1ab/nsp3463K463KaaAaaG11B.1.1.3980.003226
ORF1ab/nsp3463K463QAaaCaa11B.1.1.4200.001006
ORF1ab/nsp3463K463delAAA---11B.1.1.5190.00004
ORF1ab/nsp3463K463IaAaaTa11B.1.1.70.000001
ORF1ab/nsp3463K463NaaAaaC11B.1.1.700.000341
ORF1ab/nsp3463K463KaaAaaG11B.1.1280.000635
ORF1ab/nsp3463K463delAAA---11B.1.177.160.000664
ORF1ab/nsp3463K463KaaAaaG11B.1.177.230.003236
ORF1ab/nsp3463K463delAAA---11B.1.177.40.000211
ORF1ab/nsp3463K463EAaaGaa11B.1.177.70.000165
ORF1ab/nsp3463K463NaaAaaC11B.1.177.70.000165
ORF1ab/nsp3463K463NaaAaaC11B.1.177.80.000752
ORF1ab/nsp3463K463RaAaaGa11B.1.177.810.000189
ORF1ab/nsp3463K463del2AAa--a11B.1.177.860.000183
ORF1ab/nsp3463K463QAaaCaa11B.1.177.870.000728
ORF1ab/nsp3463K463del1Aaa-aa11B.1.20.000009
ORF1ab/nsp3463K463delAAA---11B.1.2210.000071
ORF1ab/nsp3463K463RaAaaGa11B.1.2320.000537
ORF1ab/nsp3463K463QAaaCaa11B.1.2430.00007
ORF1ab/nsp3463K463RaAaaGa11B.1.258.170.000104
ORF1ab/nsp3463K463EAaaGaa11B.1.3510.00003
ORF1ab/nsp3463K463RaAaaGa11B.1.3510.00003
ORF1ab/nsp3463K463RaAaaGa11B.1.360.000146
ORF1ab/nsp3463K463KaaAaaG11B.1.360.000146
ORF1ab/nsp3463K463delAAA---11B.1.360.000146
ORF1ab/nsp3463K463delAAA---11B.1.4290.000024
ORF1ab/nsp3463K463del1Aaa-aa11B.1.4320.011236
ORF1ab/nsp3463K463NaaAaaC11B.1.438.10.000107
ORF1ab/nsp3463K463KaaAaaG11B.1.4700.001404
ORF1ab/nsp3463K463QAaaCaa11B.1.5300.007143
ORF1ab/nsp3463K463EAaaGaa11B.1.5950.000261
ORF1ab/nsp3463K463NaaAaaC11B.1.5960.000087
ORF1ab/nsp3463K463RaAaaGa11B.1.617.20.000004
ORF1ab/nsp3463K463del1Aaa-aa11B.1.617.20.000004
ORF1ab/nsp3463K463EAaaGaa11B.1.617.20.000004
ORF1ab/nsp3463K463NaaAaaC11B.1.6370.000073
ORF1ab/nsp3463K463delAAA---11B.570.015152
ORF1ab/nsp3463K463XAaaTaa11D.20.000075
ORF1ab/nsp3463K463NaaAaaT11D.20.000075
ORF1ab/nsp3463K463delAAA---11P.10.000016
ORF1ab/nsp3463K463EAaaGaa11P.1.130.000898
ORF1ab/nsp3463K463NaaAaaC11P.1.140.000048
ORF1ab/nsp3463K463NaaAaaT11P.1.150.000232
ORF1ab/nsp3463K463QAaaCaa11Q.80.000165
ORF1ab/nsp3463K463delAAA---11R.10.00009
ORF1ab/nsp3463K463delAAA---11U.30.003861