CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF1ab/nsp3 : CodonNum = 458 & Codon = aCc

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF1ab/nsp3458I458TI1276TnonsynaTcaCc215821560.9990734091-4093

Details of the mutation no within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF1ab/nsp3458I458TaTcaCc21562158All0.000412
ORF1ab/nsp3458I458TaTcaCc10631063B.1.1.70.000952
ORF1ab/nsp3458I458TaTcaCc288288AY.4.20.006246
ORF1ab/nsp3458I458TaTcaCc246246AY.40.000383
ORF1ab/nsp3458I458TaTcaCc9191B.1.617.20.000343
ORF1ab/nsp3458I458TaTcaCc4848AY.430.000213
ORF1ab/nsp3458I458TaTcaCc3838B.10.000348
ORF1ab/nsp3458I458TaTcaCc3737AY.7.10.00417
ORF1ab/nsp3458I458TaTcaCc3232P.10.000504
ORF1ab/nsp3458I458TaTcaCc2828B.1.1.700.00955
ORF1ab/nsp3458I458TaTcaCc2828B.1.20.000247
ORF1ab/nsp3458I458TaTcaCc1818AY.470.00056
ORF1ab/nsp3458I458TaTcaCc1616C.370.001857
ORF1ab/nsp3458I458TaTcaCc1515AY.290.000237
ORF1ab/nsp3458I458TaTcaCc1414AY.440.000085
ORF1ab/nsp3458I458TaTcaCc1313B.1.1770.000171
ORF1ab/nsp3458I458TaTcaCc1212B.1.1.1530.013143
ORF1ab/nsp3458I458TaTcaCc1010AY.250.00006
ORF1ab/nsp3458I458TaTcaCc1010B.1.10.000181
ORF1ab/nsp3458I458TaTcaCc1010B.1.177.420.008945
ORF1ab/nsp3458I458TaTcaCc88AY.90.000541
ORF1ab/nsp3458I458TaTcaCc88B.1.6090.003835
ORF1ab/nsp3458I458TaTcaCc77AY.1030.000043
ORF1ab/nsp3458I458TaTcaCc66AY.350.001398
ORF1ab/nsp3458I458TaTcaCc66AY.390.000148
ORF1ab/nsp3458I458TaTcaCc55AY.1020.000133
ORF1ab/nsp3458I458TaTcaCc55AY.30.00005
ORF1ab/nsp3458I458TaTcaCc44B.1.1.1760.001757
ORF1ab/nsp3458I458TaTcaCc44B.1.1.410.025316
ORF1ab/nsp3458I458TaTcaCc33AY.1060.001005
ORF1ab/nsp3458I458TaTcaCc33AY.50.000062
ORF1ab/nsp3458I458TaTcaCc33AY.870.002498
ORF1ab/nsp3458I458TaTcaCc33B.1.1.4320.003797
ORF1ab/nsp3458I458TaTcaCc33B.1.3510.000089
ORF1ab/nsp3458I458TaTcaCc33B.1.5260.000071
ORF1ab/nsp3458I458TaTcaCc120.055556
ORF1ab/nsp3458I458TaTcaCc22AY.1000.000092
ORF1ab/nsp3458I458TaTcaCc22AY.1160.000574
ORF1ab/nsp3458I458TaTcaCc22AY.1170.000169
ORF1ab/nsp3458I458TaTcaCc22AY.120.2.10.000997
ORF1ab/nsp3458I458TaTcaCc22AY.23.10.000835
ORF1ab/nsp3458I458TaTcaCc22AY.260.000057
ORF1ab/nsp3458I458TaTcaCc22AY.610.00021
ORF1ab/nsp3458I458TaTcaCc22B.1.1390.001466
ORF1ab/nsp3458I458TaTcaCc22B.1.1690.029851
ORF1ab/nsp3458I458TaTcaCc22B.1.3670.001585
ORF1ab/nsp3458I458TaTcaCc12B.1.3690.000285
ORF1ab/nsp3458I458TaTcaCc22B.1.617.10.000258
ORF1ab/nsp3458I458TaTcaCc11A.50.001923
ORF1ab/nsp3458I458TaTcaCc11AY.100.00053
ORF1ab/nsp3458I458TaTcaCc11AY.130.000161
ORF1ab/nsp3458I458TaTcaCc11AY.200.000039
ORF1ab/nsp3458I458TaTcaCc11AY.230.00007
ORF1ab/nsp3458I458TaTcaCc11AY.240.000431
ORF1ab/nsp3458I458TaTcaCc11AY.370.000316
ORF1ab/nsp3458I458TaTcaCc11AY.46.40.000165
ORF1ab/nsp3458I458TaTcaCc11AY.5.40.000277
ORF1ab/nsp3458I458TaTcaCc11AY.530.000288
ORF1ab/nsp3458I458TaTcaCc11AY.590.00053
ORF1ab/nsp3458I458TaTcaCc11AY.60.000041
ORF1ab/nsp3458I458TaTcaCc11AY.620.000436
ORF1ab/nsp3458I458TaTcaCc11AY.860.00083
ORF1ab/nsp3458I458TaTcaCc11AY.9.10.000084
ORF1ab/nsp3458I458TaTcaCc11AY.9.20.000037
ORF1ab/nsp3458I458TaTcaCc11AY.99.20.000092
ORF1ab/nsp3458I458TaTcaCc11B.1.1.10.000327
ORF1ab/nsp3458I458TaTcaCc11B.1.1.2220.000204
ORF1ab/nsp3458I458TaTcaCc11B.1.1.2840.000107
ORF1ab/nsp3458I458TaTcaCc11B.1.1.290.010309
ORF1ab/nsp3458I458TaTcaCc11B.1.1.3330.001076
ORF1ab/nsp3458I458TaTcaCc11B.1.1.3770.001381
ORF1ab/nsp3458I458TaTcaCc11B.1.177.440.000519
ORF1ab/nsp3458I458TaTcaCc11B.1.177.70.000165
ORF1ab/nsp3458I458TaTcaCc11B.1.177.730.000566
ORF1ab/nsp3458I458TaTcaCc11B.1.177.750.001041
ORF1ab/nsp3458I458TaTcaCc11B.1.177.770.000726
ORF1ab/nsp3458I458TaTcaCc11B.1.2370.004975
ORF1ab/nsp3458I458TaTcaCc11B.1.2390.001221
ORF1ab/nsp3458I458TaTcaCc11B.1.36.170.000494
ORF1ab/nsp3458I458TaTcaCc11B.1.4220.000812
ORF1ab/nsp3458I458TaTcaCc11B.1.4270.00005
ORF1ab/nsp3458I458TaTcaCc11B.1.438.10.000107
ORF1ab/nsp3458I458TaTcaCc11B.1.4970.000315
ORF1ab/nsp3458I458TaTcaCc11B.1.5950.000261
ORF1ab/nsp3458I458TaTcaCc11B.1.6210.000089
ORF1ab/nsp3458I458TaTcaCc11B.1.6250.002353
ORF1ab/nsp3458I458TaTcaCc11B.1.6370.000073
ORF1ab/nsp3458I458TaTcaCc11C.36.30.000567
ORF1ab/nsp3458I458TaTcaCc11D.20.000075
ORF1ab/nsp3458I458TaTcaCc11P.1.100.000269
ORF1ab/nsp3458I458TaTcaCc11Q.80.000165
ORF1ab/nsp3458I458TaTcaCc11R.10.00009