CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF1ab/nsp3 : CodonNum = 428

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF1ab/nsp3428T428IT1246InonsynaCtaTt24957249530.999844001-4003
ORF1ab/nsp3428T428IT1246InonsynaCTaTC2495730.0001202074001-4003
ORF1ab/nsp3428T428IT1246InonsynaCTaTA2495710.00004006894001-4003
ORF1ab/nsp3428T428TT1246TsynacTacC1741650.9482764001-4003
ORF1ab/nsp3428T428TT1246TsynacTacA17470.04022994001-4003
ORF1ab/nsp3428T428TT1246TsynacTacG17420.01149434001-4003
ORF1ab/nsp3428T428AT1246AnonsynActGct93920.9892474001-4003
ORF1ab/nsp3428T428AT1246AnonsynAcTGcC9310.01075274001-4003
ORF1ab/nsp3428T428delT1246deldelACT---797914001-4003
ORF1ab/nsp3428T428NT1246NnonsynaCtaAt65640.9846154001-4003
ORF1ab/nsp3428T428NT1246NnonsynaCTaAC6510.01538464001-4003
ORF1ab/nsp3428T428ST1246SnonsynaCtaGt760.8571434001-4003
ORF1ab/nsp3428T428ST1246SnonsynActTct710.1428574001-4003
ORF1ab/nsp3428T428RT1246RnonsynACtCGt530.64001-4003
ORF1ab/nsp3428T428RT1246RnonsynACTCGA510.24001-4003
ORF1ab/nsp3428T428RT1246RnonsynaCTaGA510.24001-4003
ORF1ab/nsp3428T428del2T1246del2delACt--t4414001-4003
ORF1ab/nsp3428T428PT1246PnonsynActCct430.754001-4003
ORF1ab/nsp3428T428PT1246PnonsynAcTCcA410.254001-4003
ORF1ab/nsp3428T428CT1246CnonsynACtTGt3314001-4003
ORF1ab/nsp3428T428VT1246VnonsynACtGTt320.6666674001-4003
ORF1ab/nsp3428T428VT1246VnonsynACTGTC310.3333334001-4003
ORF1ab/nsp3428T428KT1246KnonsynaCTaAA2214001-4003
ORF1ab/nsp3428T428del1T1246del1delacTac-210.54001-4003
ORF1ab/nsp3428T428del1T1246del1delAct-ct210.54001-4003
ORF1ab/nsp3428T428YT1246YnonsynACtTAt1114001-4003
ORF1ab/nsp3428T428LT1246LnonsynACTCTA1114001-4003

Details of the mutation no within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF1ab/nsp3428T428IaCtaTt2495324957All0.004773
ORF1ab/nsp3428T428IaCTaTC324957All0.000001
ORF1ab/nsp3428T428IaCTaTA124957All0
ORF1ab/nsp3428T428IaCtaTt85128512C.370.987929
ORF1ab/nsp3428T428IaCtaTt30053005B.1.1.10.981705
ORF1ab/nsp3428T428IaCtaTt17411741C.36.30.987521
ORF1ab/nsp3428T428IaCtaTt12841284C.350.993808
ORF1ab/nsp3428T428IaCtaTt10861086C.360.989071
ORF1ab/nsp3428T428IaCtaTt939939C.160.995758
ORF1ab/nsp3428T428IaCtaTt661661B.1.1.70.000592
ORF1ab/nsp3428T428IaCtaTt655655AY.40.001019
ORF1ab/nsp3428T428IaCtaTt579579C.301
ORF1ab/nsp3428T428IaCtaTt408408C.10.976077
ORF1ab/nsp3428T428IaCtaTt385385C.180.997409
ORF1ab/nsp3428T428IaCtaTt364364C.37.10.95288
ORF1ab/nsp3428T428IaCtaTt363363C.36.3.10.986413
ORF1ab/nsp3428T428IaCtaTt241241C.36.11
ORF1ab/nsp3428T428IaCtaTt231231C.141
ORF1ab/nsp3428T428IaCtaTt226226C.1.20.961702
ORF1ab/nsp3428T428IaCtaTt224224C.81
ORF1ab/nsp3428T428IaCtaTt200200B.10.001832
ORF1ab/nsp3428T428TacTacC165174All0.000032
ORF1ab/nsp3428T428TacTacA7174All0.000001
ORF1ab/nsp3428T428TacTacG2174All0
ORF1ab/nsp3428T428IaCtaTt172172C.231
ORF1ab/nsp3428T428IaCtaTt168168P.20.031355
ORF1ab/nsp3428T428IaCtaTt164164AY.1030.001018
ORF1ab/nsp3428T428IaCtaTt161161B.1.20.001418
ORF1ab/nsp3428T428IaCtaTt149149C.30.11
ORF1ab/nsp3428T428IaCtaTt148148C.2.10.986667
ORF1ab/nsp3428T428IaCtaTt139139C.121
ORF1ab/nsp3428T428IaCtaTt136136C.261
ORF1ab/nsp3428T428IaCtaTt130130C.30.992366
ORF1ab/nsp3428T428IaCtaTt122122C.380.983871
ORF1ab/nsp3428T428IaCtaTt100100C.41
ORF1ab/nsp3428T428IaCtaTt9595B.1.1.1530.104053
ORF1ab/nsp3428T428IaCtaTt9494C.111
ORF1ab/nsp3428T428AActGct9293All0.000018
ORF1ab/nsp3428T428AAcTGcC193All0
ORF1ab/nsp3428T428IaCtaTt9292B.1.10.001669
ORF1ab/nsp3428T428IaCtaTt8282B.1.177.570.02304
ORF1ab/nsp3428T428delACT---7979All0.000015
ORF1ab/nsp3428T428IaCtaTt7676B.1.1.3750.904762
ORF1ab/nsp3428T428IaCtaTt6767B.1.617.20.000252
ORF1ab/nsp3428T428NaCtaAt6465All0.000012
ORF1ab/nsp3428T428NaCTaAC165All0
ORF1ab/nsp3428T428IaCtaTt6262C.21
ORF1ab/nsp3428T428IaCtaTt5757B.1.5250.00645
ORF1ab/nsp3428T428IaCtaTt5757B.1.5260.00134
ORF1ab/nsp3428T428IaCtaTt5556C.310.982143
ORF1ab/nsp3428T428IaCTaTC156C.310.017857
ORF1ab/nsp3428T428IaCtaTt5454C.271
ORF1ab/nsp3428T428IaCtaTt5252C.390.981132
ORF1ab/nsp3428T428IaCtaTt4747AY.440.000286
ORF1ab/nsp3428T428IaCtaTt4545B.1.1770.000593
ORF1ab/nsp3428T428IaCtaTt4343C.321
ORF1ab/nsp3428T428IaCtaTt4141B.1.3510.001219
ORF1ab/nsp3428T428IaCtaTt3939C.131
ORF1ab/nsp3428T428IaCtaTt3737C.191
ORF1ab/nsp3428T428IaCtaTt3636C.401
ORF1ab/nsp3428T428IaCtaTt3535AY.430.000155
ORF1ab/nsp3428T428TacTacC3234B.1.1.70.000029
ORF1ab/nsp3428T428TacTacA134B.1.1.70.000001
ORF1ab/nsp3428T428TacTacG134B.1.1.70.000001
ORF1ab/nsp3428T428IaCtaTt3333B.1.1.3720.022727
ORF1ab/nsp3428T428TacTacC3232AY.1030.000199
ORF1ab/nsp3428T428IaCtaTt3232AY.330.002137
ORF1ab/nsp3428T428IaCtaTt3232C.90.969697
ORF1ab/nsp3428T428IaCtaTt3030B.1.6090.014382
ORF1ab/nsp3428T428IaCtaTt2929C.36.21
ORF1ab/nsp3428T428IaCtaTt2929C.71
ORF1ab/nsp3428T428IaCtaTt2727C.341
ORF1ab/nsp3428T428IaCtaTt2727C.61
ORF1ab/nsp3428T428IaCtaTt2626AY.250.000156
ORF1ab/nsp3428T428IaCtaTt2525C.281
ORF1ab/nsp3428T428NaCtaAt2323AY.440.00014
ORF1ab/nsp3428T428IaCtaTt2323P.10.000362
ORF1ab/nsp3428T428IaCtaTt2222B.1.1.2840.002363
ORF1ab/nsp3428T428IaCtaTt1919AY.290.0003
ORF1ab/nsp3428T428IaCtaTt1919B.1.1.5190.000755
ORF1ab/nsp3428T428IaCtaTt1919B.1.1600.000593
ORF1ab/nsp3428T428IaCtaTt1818B.1.214.20.010791
ORF1ab/nsp3428T428IaCtaTt1818B.1.4290.000424
ORF1ab/nsp3428T428IaCtaTt1717C.331
ORF1ab/nsp3428T428IaCtaTt1616B.1.4270.000808
ORF1ab/nsp3428T428delACT---1515B.1.1.70.000013
ORF1ab/nsp3428T428IaCtaTt1515C.290.9375
ORF1ab/nsp3428T428IaCtaTt1515Q.10.001895
ORF1ab/nsp3428T428IaCtaTt1414C.221
ORF1ab/nsp3428T428IaCtaTt1313AY.1200.000483
ORF1ab/nsp3428T428IaCtaTt1313AY.30.000129
ORF1ab/nsp3428T428IaCtaTt1313B.1.2580.000865
ORF1ab/nsp3428T428TacTacC1313B.1.360.001897
ORF1ab/nsp3428T428IaCtaTt1313C.1.11
ORF1ab/nsp3428T428IaCtaTt1313C.201
ORF1ab/nsp3428T428IaCtaTt1212AY.1020.000318
ORF1ab/nsp3428T428IaCtaTt1212AY.260.00034
ORF1ab/nsp3428T428IaCtaTt1212B.1.258.170.001248
ORF1ab/nsp3428T428IaCtaTt1212C.170.666667
ORF1ab/nsp3428T428IaCtaTt1111AY.1060.003684
ORF1ab/nsp3428T428IaCtaTt1111AY.200.000428
ORF1ab/nsp3428T428TacTacC1011B.10.000092
ORF1ab/nsp3428T428TacTacA111B.10.000009
ORF1ab/nsp3428T428AActGct1111B.1.10.0002
ORF1ab/nsp3428T428IaCtaTt1111B.1.177.540.006671
ORF1ab/nsp3428T428IaCtaTt1111C.51
ORF1ab/nsp3428T428IaCtaTt1010AY.530.002875
ORF1ab/nsp3428T428IaCtaTt1010AY.99.20.000922
ORF1ab/nsp3428T428AActGct1010B.1.1.2160.008905
ORF1ab/nsp3428T428IaCtaTt1010B.1.177.810.001893
ORF1ab/nsp3428T428IaCtaTt99AY.140.000792
ORF1ab/nsp3428T428AActGct99B.1.1.70.000008
ORF1ab/nsp3428T428AActGct88AY.1030.00005
ORF1ab/nsp3428T428IaCtaTt88B.1.1.280.00249
ORF1ab/nsp3428T428TacTacC88B.1.1.2840.000859
ORF1ab/nsp3428T428IaCtaTt88B.1.5680.008889
ORF1ab/nsp3428T428IaCtaTt88C.251
ORF1ab/nsp3428T428IaCtaTt88P.1.150.001859
ORF1ab/nsp3428T428SaCtaGt67All0.000001
ORF1ab/nsp3428T428SActTct17All0
ORF1ab/nsp3428T428IaCtaTt77AY.1170.000592
ORF1ab/nsp3428T428IaCtaTt77AY.460.000729
ORF1ab/nsp3428T428IaCtaTt77AY.50.000145
ORF1ab/nsp3428T428IaCtaTt77B.1.1.3010.008255
ORF1ab/nsp3428T428IaCtaTt77B.1.5240.009845
ORF1ab/nsp3428T428TacTacC460.222222
ORF1ab/nsp3428T428TacTacA260.111111
ORF1ab/nsp3428T428AActGct66AY.1000.000276
ORF1ab/nsp3428T428IaCtaTt66AY.360.000889
ORF1ab/nsp3428T428IaCtaTt66AY.390.000148
ORF1ab/nsp3428T428delACT---66AY.40.000009
ORF1ab/nsp3428T428IaCtaTt66B0.000767
ORF1ab/nsp3428T428IaCtaTt66B.1.1.2940.007595
ORF1ab/nsp3428T428AActGct66B.1.617.20.000023
ORF1ab/nsp3428T428delACT---66B.1.617.20.000023
ORF1ab/nsp3428T428IaCtaTt66B.1.6280.002114
ORF1ab/nsp3428T428IaCtaTt66C.210.857143
ORF1ab/nsp3428T428RACtCGt35All0.000001
ORF1ab/nsp3428T428RACTCGA15All0
ORF1ab/nsp3428T428RaCTaGA15All0
ORF1ab/nsp3428T428IaCtaTt55AY.1000.00023
ORF1ab/nsp3428T428TacTacC55AY.250.00003
ORF1ab/nsp3428T428IaCtaTt55AY.3.10.000426
ORF1ab/nsp3428T428IaCtaTt55AY.4.20.000108
ORF1ab/nsp3428T428NaCtaAt55AY.430.000022
ORF1ab/nsp3428T428AActGct55B.10.000046
ORF1ab/nsp3428T428IaCtaTt55B.1.1.3480.003981
ORF1ab/nsp3428T428NaCtaAt55B.1.1.70.000004
ORF1ab/nsp3428T428AActGct55B.1.20.000044
ORF1ab/nsp3428T428IaCtaTt55B.1.2210.000355
ORF1ab/nsp3428T428IaCtaTt55B.1.230.030303
ORF1ab/nsp3428T428IaCtaTt55B.1.2430.000348
ORF1ab/nsp3428T428IaCtaTt55B.1.360.00073
ORF1ab/nsp3428T428IaCtaTt55B.1.5750.001517
ORF1ab/nsp3428T428TacTacC45B.1.617.20.000015
ORF1ab/nsp3428T428TacTacA15B.1.617.20.000004
ORF1ab/nsp3428T428IaCtaTt55D.20.000375
ORF1ab/nsp3428T428IaCtaTt240.111111
ORF1ab/nsp3428T428IaCTaTC140.055556
ORF1ab/nsp3428T428IaCTaTA140.055556
ORF1ab/nsp3428T428IaCtaTt44A.2.5.20.006289
ORF1ab/nsp3428T428del2ACt--t44All0.000001
ORF1ab/nsp3428T428PActCct34All0.000001
ORF1ab/nsp3428T428PAcTCcA14All0
ORF1ab/nsp3428T428NaCtaAt44AY.1180.000251
ORF1ab/nsp3428T428NaCtaAt44AY.40.000006
ORF1ab/nsp3428T428AActGct44AY.4.2.10.000596
ORF1ab/nsp3428T428IaCtaTt44AY.4.50.00043
ORF1ab/nsp3428T428IaCtaTt44AY.470.000124
ORF1ab/nsp3428T428IaCtaTt44AY.7.20.002237
ORF1ab/nsp3428T428IaCtaTt44AY.750.000224
ORF1ab/nsp3428T428IaCtaTt44AY.9.20.000147
ORF1ab/nsp3428T428delACT---44B.10.000037
ORF1ab/nsp3428T428IaCtaTt44B.1.1.250.002274
ORF1ab/nsp3428T428IaCtaTt44B.1.1.4340.001394
ORF1ab/nsp3428T428IaCtaTt44B.1.1.5260.014184
ORF1ab/nsp3428T428IaCtaTt44B.1.1.700.001364
ORF1ab/nsp3428T428TacTacC44B.1.2580.000266
ORF1ab/nsp3428T428IaCtaTt44B.1.258.140.003922
ORF1ab/nsp3428T428IaCtaTt44B.1.5130.055556
ORF1ab/nsp3428T428IaCtaTt44B.1.5960.000349
ORF1ab/nsp3428T428IaCtaTt44B.1.617.10.000516
ORF1ab/nsp3428T428AActGct44B.1.6370.000292
ORF1ab/nsp3428T428IaCtaTt44C.101
ORF1ab/nsp3428T428IaCtaTt44P.1.70.001277
ORF1ab/nsp3428T428NaCtaAt230.111111
ORF1ab/nsp3428T428NaCTaAC130.055556
ORF1ab/nsp3428T428CACtTGt33All0.000001
ORF1ab/nsp3428T428VACtGTt23All0
ORF1ab/nsp3428T428VACTGTC13All0
ORF1ab/nsp3428T428NaCtaAt33AY.1030.000019
ORF1ab/nsp3428T428IaCtaTt33AY.1130.000427
ORF1ab/nsp3428T428TacTacC33AY.1140.000693
ORF1ab/nsp3428T428NaCtaAt33AY.200.000117
ORF1ab/nsp3428T428TacTacC33AY.200.000117
ORF1ab/nsp3428T428NaCtaAt33AY.23.10.001252
ORF1ab/nsp3428T428IaCtaTt33AY.340.000291
ORF1ab/nsp3428T428TacTacC23AY.40.000003
ORF1ab/nsp3428T428TacTacG13AY.40.000002
ORF1ab/nsp3428T428delACT---33AY.4.50.000322
ORF1ab/nsp3428T428IaCtaTt33AY.420.000121
ORF1ab/nsp3428T428NaCtaAt33AY.46.30.002801
ORF1ab/nsp3428T428IaCtaTt33AY.640.001786
ORF1ab/nsp3428T428IaCtaTt33AY.75.10.000541
ORF1ab/nsp3428T428IaCtaTt33AY.880.002653
ORF1ab/nsp3428T428IaCtaTt33AY.9.10.000251
ORF1ab/nsp3428T428TacTacC33AY.98.10.000145
ORF1ab/nsp3428T428AActGct33B0.000383
ORF1ab/nsp3428T428RACTCGA13B.1.1.330.000421
ORF1ab/nsp3428T428RACtCGt13B.1.1.330.000421
ORF1ab/nsp3428T428RaCTaGA13B.1.1.330.000421
ORF1ab/nsp3428T428IaCtaTt33B.1.1.4480.006098
ORF1ab/nsp3428T428IaCtaTt33B.1.1.500.002037
ORF1ab/nsp3428T428SaCtaGt23B.1.1.70.000002
ORF1ab/nsp3428T428SActTct13B.1.1.70.000001
ORF1ab/nsp3428T428TacTacC33B.1.1110.003525
ORF1ab/nsp3428T428IaCtaTt33B.1.177.210.000229
ORF1ab/nsp3428T428TacTacC33B.1.20.000026
ORF1ab/nsp3428T428IaCtaTt33B.1.3990.005803
ORF1ab/nsp3428T428IaCtaTt33B.1.4220.002437
ORF1ab/nsp3428T428AActGct33B.1.4690.01083
ORF1ab/nsp3428T428delACT---33B.1.5960.000261
ORF1ab/nsp3428T428IaCtaTt33Q.80.000495
ORF1ab/nsp3428T428KaCTaAA220.111111
ORF1ab/nsp3428T428AActGct120.055556
ORF1ab/nsp3428T428AAcTGcC120.055556
ORF1ab/nsp3428T428VACTGTC120.055556
ORF1ab/nsp3428T428VACtGTt120.055556
ORF1ab/nsp3428T428IaCtaTt22A0.000774
ORF1ab/nsp3428T428KaCTaAA22All0
ORF1ab/nsp3428T428del1Act-ct12All0
ORF1ab/nsp3428T428del1acTac-12All0
ORF1ab/nsp3428T428IaCtaTt22AY.1090.001479
ORF1ab/nsp3428T428IaCtaTt22AY.1190.000071
ORF1ab/nsp3428T428IaCtaTt22AY.230.000139
ORF1ab/nsp3428T428TacTacC22AY.290.000032
ORF1ab/nsp3428T428TacTacC22AY.30.00002
ORF1ab/nsp3428T428NaCtaAt22AY.30.00002
ORF1ab/nsp3428T428delACT---22AY.430.000009
ORF1ab/nsp3428T428TacTacC22AY.430.000009
ORF1ab/nsp3428T428IaCtaTt22AY.46.40.000329
ORF1ab/nsp3428T428TacTacC22AY.540.000191
ORF1ab/nsp3428T428IaCtaTt22AY.60.000082
ORF1ab/nsp3428T428IaCtaTt22AY.670.000929
ORF1ab/nsp3428T428IaCtaTt22AY.98.10.000097
ORF1ab/nsp3428T428IaCtaTt22B.1.1.1890.003026
ORF1ab/nsp3428T428IaCtaTt22B.1.1.1940.009901
ORF1ab/nsp3428T428IaCtaTt22B.1.1.2200.003717
ORF1ab/nsp3428T428IaCtaTt22B.1.1.2220.000408
ORF1ab/nsp3428T428delACT---22B.1.1.2320.00363
ORF1ab/nsp3428T428PActCct12B.1.1.330.000421
ORF1ab/nsp3428T428PAcTCcA12B.1.1.330.000421
ORF1ab/nsp3428T428IaCtaTt22B.1.1.370.000386
ORF1ab/nsp3428T428IaCtaTt22B.1.1.3980.006452
ORF1ab/nsp3428T428IaCtaTt22B.1.1.4020.022222
ORF1ab/nsp3428T428IaCtaTt22B.1.1.4090.005666
ORF1ab/nsp3428T428IaCtaTt22B.1.1.520.02439
ORF1ab/nsp3428T428IaCtaTt22B.1.1.5280.009615
ORF1ab/nsp3428T428CACtTGt22B.1.1.70.000002
ORF1ab/nsp3428T428del2ACt--t22B.1.1.70.000002
ORF1ab/nsp3428T428IaCtaTt22B.1.1.830.00542
ORF1ab/nsp3428T428IaCtaTt22B.1.1700.008621
ORF1ab/nsp3428T428delACT---22B.1.1770.000026
ORF1ab/nsp3428T428delACT---22B.1.177.40.000422
ORF1ab/nsp3428T428delACT---22B.1.258.170.000208
ORF1ab/nsp3428T428IaCtaTt22B.1.3110.000549
ORF1ab/nsp3428T428IaCtaTt22B.1.36.10.002281
ORF1ab/nsp3428T428IaCtaTt22B.1.3750.001639
ORF1ab/nsp3428T428IaCtaTt22B.1.3960.001411
ORF1ab/nsp3428T428TacTacC22B.1.3960.001411
ORF1ab/nsp3428T428TacTacC22B.1.4270.000101
ORF1ab/nsp3428T428IaCtaTt22B.1.5760.001813
ORF1ab/nsp3428T428TacTacC22B.1.617.10.000258
ORF1ab/nsp3428T428delACT---22B.1.6210.000177
ORF1ab/nsp3428T428IaCtaTt22B.1.6210.000177
ORF1ab/nsp3428T428TacTacC22B.1.6280.000705
ORF1ab/nsp3428T428IaCtaTt22B.1.780.017094
ORF1ab/nsp3428T428TacTacC22D.20.00015
ORF1ab/nsp3428T428TacTacC22P.10.000032
ORF1ab/nsp3428T428delACT---22P.10.000032
ORF1ab/nsp3428T428IaCtaTt22P.1.10.000635
ORF1ab/nsp3428T428IaCtaTt22P.1.120.000968
ORF1ab/nsp3428T428delACT---22P.1.120.000968
ORF1ab/nsp3428T428TacTacC11A.23.10.000704
ORF1ab/nsp3428T428IaCtaTt11A.270.001656
ORF1ab/nsp3428T428IaCtaTt11AD.20.000219
ORF1ab/nsp3428T428YACtTAt11All0
ORF1ab/nsp3428T428LACTCTA11All0
ORF1ab/nsp3428T428IaCtaTt11AY.10.000396
ORF1ab/nsp3428T428TacTacC11AY.1020.000027
ORF1ab/nsp3428T428AActGct11AY.1020.000027
ORF1ab/nsp3428T428del1acTac-11AY.1030.000006
ORF1ab/nsp3428T428IaCtaTt11AY.1070.000466
ORF1ab/nsp3428T428TacTacC11AY.1130.000142
ORF1ab/nsp3428T428AActGct11AY.1130.000142
ORF1ab/nsp3428T428IaCtaTt11AY.1160.000287
ORF1ab/nsp3428T428AActGct11AY.1190.000035
ORF1ab/nsp3428T428delACT---11AY.1190.000035
ORF1ab/nsp3428T428IaCtaTt11AY.120.000316
ORF1ab/nsp3428T428IaCtaTt11AY.1210.000135
ORF1ab/nsp3428T428IaCtaTt11AY.130.000161
ORF1ab/nsp3428T428IaCtaTt11AY.150.002222
ORF1ab/nsp3428T428TacTacC11AY.29.10.000221
ORF1ab/nsp3428T428AActGct11AY.30.00001
ORF1ab/nsp3428T428IaCtaTt11AY.300.000396
ORF1ab/nsp3428T428IaCtaTt11AY.320.000532
ORF1ab/nsp3428T428IaCtaTt11AY.34.10.00051
ORF1ab/nsp3428T428IaCtaTt11AY.350.000233
ORF1ab/nsp3428T428delACT---11AY.360.000148
ORF1ab/nsp3428T428AActGct11AY.360.000148
ORF1ab/nsp3428T428IaCtaTt11AY.380.000499
ORF1ab/nsp3428T428NaCtaAt11AY.390.000025
ORF1ab/nsp3428T428IaCtaTt11AY.39.10.00004
ORF1ab/nsp3428T428AActGct11AY.40.000002
ORF1ab/nsp3428T428IaCtaTt11AY.4.10.000737
ORF1ab/nsp3428T428NaCtaAt11AY.4.20.000022
ORF1ab/nsp3428T428AActGct11AY.400.000964
ORF1ab/nsp3428T428IaCtaTt11AY.410.000294
ORF1ab/nsp3428T428AActGct11AY.430.000004
ORF1ab/nsp3428T428AActGct11AY.440.000006
ORF1ab/nsp3428T428TacTacC11AY.440.000006
ORF1ab/nsp3428T428IaCtaTt11AY.450.000122
ORF1ab/nsp3428T428TacTacC11AY.460.000104
ORF1ab/nsp3428T428delACT---11AY.46.60.000072
ORF1ab/nsp3428T428IaCtaTt11AY.46.60.000072
ORF1ab/nsp3428T428IaCtaTt11AY.540.000095
ORF1ab/nsp3428T428IaCtaTt11AY.610.000105
ORF1ab/nsp3428T428IaCtaTt11AY.620.000436
ORF1ab/nsp3428T428IaCtaTt11AY.680.000274
ORF1ab/nsp3428T428TacTacA11AY.690.000187
ORF1ab/nsp3428T428IaCtaTt11AY.70.000196
ORF1ab/nsp3428T428TacTacC11AY.7.20.000559
ORF1ab/nsp3428T428delACT---11AY.720.001361
ORF1ab/nsp3428T428IaCtaTt11AY.740.000116
ORF1ab/nsp3428T428delACT---11AY.75.10.00018
ORF1ab/nsp3428T428TacTacC11AY.75.10.00018
ORF1ab/nsp3428T428IaCtaTt11AY.770.001127
ORF1ab/nsp3428T428AActGct11AY.840.000437
ORF1ab/nsp3428T428IaCtaTt11AY.90.000068
ORF1ab/nsp3428T428TacTacC11AY.9.10.000084
ORF1ab/nsp3428T428IaCtaTt11AY.910.00073
ORF1ab/nsp3428T428IaCtaTt11AY.920.000287
ORF1ab/nsp3428T428IaCtaTt11AZ.10.000867
ORF1ab/nsp3428T428SaCtaGt11B.10.000009
ORF1ab/nsp3428T428NaCtaAt11B.10.000009
ORF1ab/nsp3428T428YACtTAt11B.10.000009
ORF1ab/nsp3428T428SaCtaGt11B.1.10.000018
ORF1ab/nsp3428T428delACT---11B.1.10.000018
ORF1ab/nsp3428T428TacTacC11B.1.10.000018
ORF1ab/nsp3428T428delACT---11B.1.1.10.000327
ORF1ab/nsp3428T428IaCtaTt11B.1.1.1640.005155
ORF1ab/nsp3428T428delACT---11B.1.1.1920.002309
ORF1ab/nsp3428T428IaCtaTt11B.1.1.2140.000055
ORF1ab/nsp3428T428delACT---11B.1.1.2220.000204
ORF1ab/nsp3428T428TacTacC11B.1.1.2910.000742
ORF1ab/nsp3428T428delACT---11B.1.1.3010.001179
ORF1ab/nsp3428T428IaCtaTt11B.1.1.3060.000438
ORF1ab/nsp3428T428TacTacC11B.1.1.3180.000302
ORF1ab/nsp3428T428IaCtaTt11B.1.1.3180.000302
ORF1ab/nsp3428T428IaCtaTt11B.1.1.3290.003846
ORF1ab/nsp3428T428TacTacA11B.1.1.330.000421
ORF1ab/nsp3428T428IaCtaTt11B.1.1.330.000421
ORF1ab/nsp3428T428delACT---11B.1.1.330.000421
ORF1ab/nsp3428T428SaCtaGt11B.1.1.330.000421
ORF1ab/nsp3428T428delACT---11B.1.1.5190.00004
ORF1ab/nsp3428T428AActGct11B.1.1.5190.00004
ORF1ab/nsp3428T428TacTacC11B.1.1.5280.004808
ORF1ab/nsp3428T428AActGct11B.1.1.570.011494
ORF1ab/nsp3428T428IaCtaTt11B.1.1.580.005376
ORF1ab/nsp3428T428IaCtaTt11B.1.1.610.008772
ORF1ab/nsp3428T428del1Act-ct11B.1.1.70.000001
ORF1ab/nsp3428T428RACtCGt11B.1.1.70.000001
ORF1ab/nsp3428T428SaCtaGt11B.1.1280.000635
ORF1ab/nsp3428T428IaCtaTt11B.1.1400.018868
ORF1ab/nsp3428T428AActGct11B.1.1570.002985
ORF1ab/nsp3428T428IaCtaTt11B.1.160.170.001701
ORF1ab/nsp3428T428IaCtaTt11B.1.160.280.002924
ORF1ab/nsp3428T428delACT---11B.1.160.320.004292
ORF1ab/nsp3428T428delACT---11B.1.177.160.000664
ORF1ab/nsp3428T428NaCtaAt11B.1.177.330.001645
ORF1ab/nsp3428T428IaCtaTt11B.1.177.40.000211
ORF1ab/nsp3428T428IaCtaTt11B.1.177.440.000519
ORF1ab/nsp3428T428IaCtaTt11B.1.177.60.000977
ORF1ab/nsp3428T428IaCtaTt11B.1.177.70.000165
ORF1ab/nsp3428T428delACT---11B.1.177.830.001481
ORF1ab/nsp3428T428IaCtaTt11B.1.177.840.006667
ORF1ab/nsp3428T428IaCtaTt11B.1.177.90.001332
ORF1ab/nsp3428T428IaCtaTt11B.1.1790.003759
ORF1ab/nsp3428T428PActCct11B.1.20.000009
ORF1ab/nsp3428T428delACT---11B.1.20.000009
ORF1ab/nsp3428T428LACTCTA11B.1.20.000009
ORF1ab/nsp3428T428del2ACt--t11B.1.20.000009
ORF1ab/nsp3428T428IaCtaTt11B.1.2050.02381
ORF1ab/nsp3428T428IaCtaTt11B.1.2100.002132
ORF1ab/nsp3428T428NaCtaAt11B.1.214.20.0006
ORF1ab/nsp3428T428IaCtaTt11B.1.214.30.007143
ORF1ab/nsp3428T428delACT---11B.1.2210.000071
ORF1ab/nsp3428T428TacTacC11B.1.2210.000071
ORF1ab/nsp3428T428IaCtaTt11B.1.2400.000216
ORF1ab/nsp3428T428delACT---11B.1.2580.000067
ORF1ab/nsp3428T428delACT---11B.1.258.160.001637
ORF1ab/nsp3428T428IaCtaTt11B.1.3240.001605
ORF1ab/nsp3428T428IaCtaTt11B.1.3320.003497
ORF1ab/nsp3428T428AActGct11B.1.360.000146
ORF1ab/nsp3428T428delACT---11B.1.360.000146
ORF1ab/nsp3428T428IaCtaTt11B.1.36.180.00042
ORF1ab/nsp3428T428IaCtaTt11B.1.36.210.00216
ORF1ab/nsp3428T428IaCtaTt11B.1.36.290.000517
ORF1ab/nsp3428T428IaCtaTt11B.1.36.350.002604
ORF1ab/nsp3428T428IaCtaTt11B.1.3670.000792
ORF1ab/nsp3428T428IaCtaTt11B.1.3980.002976
ORF1ab/nsp3428T428IaCtaTt11B.1.4040.001302
ORF1ab/nsp3428T428AActGct11B.1.4090.000781
ORF1ab/nsp3428T428delACT---11B.1.4150.014286
ORF1ab/nsp3428T428IaCtaTt11B.1.4160.001269
ORF1ab/nsp3428T428delACT---11B.1.4290.000024
ORF1ab/nsp3428T428IaCtaTt11B.1.438.10.000107
ORF1ab/nsp3428T428IaCtaTt11B.1.4700.001404
ORF1ab/nsp3428T428delACT---11B.1.5260.000024
ORF1ab/nsp3428T428AActGct11B.1.5260.000024
ORF1ab/nsp3428T428AActGct11B.1.5270.003704
ORF1ab/nsp3428T428IaCtaTt11B.1.5330.009615
ORF1ab/nsp3428T428IaCtaTt11B.1.5400.009709
ORF1ab/nsp3428T428IaCtaTt11B.1.5610.000397
ORF1ab/nsp3428T428IaCtaTt11B.1.5950.000261
ORF1ab/nsp3428T428IaCtaTt11B.1.6000.005848
ORF1ab/nsp3428T428RACtCGt11B.1.617.10.000129
ORF1ab/nsp3428T428del2ACt--t11B.1.617.20.000004
ORF1ab/nsp3428T428NaCtaAt11B.1.617.20.000004
ORF1ab/nsp3428T428IaCtaTt11B.1.6230.000536
ORF1ab/nsp3428T428IaCtaTt11B.1.810.021277
ORF1ab/nsp3428T428IaCtaTt11B.1.9.50.005682
ORF1ab/nsp3428T428delACT---11B.570.015152
ORF1ab/nsp3428T428IaCTaTC11B.60.00091
ORF1ab/nsp3428T428VACtGTt11C.370.000116
ORF1ab/nsp3428T428PActCct11D.20.000075
ORF1ab/nsp3428T428IaCtaTt11N.40.004255
ORF1ab/nsp3428T428IaCtaTt11N.50.001767
ORF1ab/nsp3428T428NaCtaAt11P.10.000016
ORF1ab/nsp3428T428TacTacC11P.1.10.000318
ORF1ab/nsp3428T428IaCtaTt11P.1.130.000898
ORF1ab/nsp3428T428TacTacC11P.1.150.000232
ORF1ab/nsp3428T428IaCtaTt11P.1.20.001156
ORF1ab/nsp3428T428IaCtaTt11P.70.004367
ORF1ab/nsp3428T428CACtTGt11Q.80.000165
ORF1ab/nsp3428T428delACT---11R.10.00009
ORF1ab/nsp3428T428delACT---11U.30.003861