CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF1ab/nsp3 : CodonNum = 425 & Codon = ctA

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF1ab/nsp3425L425LL1243LsynctGctA1628994660.5811283992-3994

Details of the mutation no within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF1ab/nsp3425L425LctGctA946616289All0.00181
ORF1ab/nsp3425L425LctGctA84298430AY.740.974789
ORF1ab/nsp3425L425LctGctA853095B.1.1.70.000076
ORF1ab/nsp3425L425LctGctA31565AY.40.000048
ORF1ab/nsp3425L425LctGctA308308B.1.36.90.990354
ORF1ab/nsp3425L425LctGctA2288AY.200.000078
ORF1ab/nsp3425L425LctGctA2271P.10.000032
ORF1ab/nsp3425L425LctGctA56199B.1.617.20.000211
ORF1ab/nsp3425L425LctGctA9159AY.430.00004
ORF1ab/nsp3425L425LctGctA6130B.1.10.000109
ORF1ab/nsp3425L425LctGctA15118AY.440.000091
ORF1ab/nsp3425L425LctGctA68110B.1.1770.000895
ORF1ab/nsp3425L425LctGctA9106B.10.000082
ORF1ab/nsp3425L425LctGctA265B.1.438.10.000215
ORF1ab/nsp3425L425LctGctA2259AY.1020.000583
ORF1ab/nsp3425L425LctGctA5555AY.120.017383
ORF1ab/nsp3425L425LctGctA2053AY.1030.000124
ORF1ab/nsp3425L425LctGctA249AY.30.00002
ORF1ab/nsp3425L425LctGctA4348AY.470.001338
ORF1ab/nsp3425L425LctGctA3939B.1.1200.3
ORF1ab/nsp3425L425LctGctA3737AY.210.070209
ORF1ab/nsp3425L425LctGctA534B.1.20.000044
ORF1ab/nsp3425L425LctGctA1431AY.250.000084
ORF1ab/nsp3425L425LctGctA2526AY.450.003042
ORF1ab/nsp3425L425LctGctA618AY.390.000148
ORF1ab/nsp3425L425LctGctA118B.1.4290.000024
ORF1ab/nsp3425L425LctGctA117AY.260.000028
ORF1ab/nsp3425L425LctGctA717AY.330.000467
ORF1ab/nsp3425L425LctGctA817AY.50.000165
ORF1ab/nsp3425L425LctGctA417B.1.2210.000284
ORF1ab/nsp3425L425LctGctA416B.1.360.000584
ORF1ab/nsp3425L425LctGctA316B.1.5260.000071
ORF1ab/nsp3425L425LctGctA715B.1.3510.000208
ORF1ab/nsp3425L425LctGctA1314AY.240.005603
ORF1ab/nsp3425L425LctGctA1014B.1.2340.001319
ORF1ab/nsp3425L425LctGctA1111C.160.011665
ORF1ab/nsp3425L425LctGctA1010AY.5.30.003374
ORF1ab/nsp3425L425LctGctA810B.1.4270.000404
ORF1ab/nsp3425L425LctGctA59AY.290.000079
ORF1ab/nsp3425L425LctGctA28AY.1130.000285
ORF1ab/nsp3425L425LctGctA88AZ.40.026846
ORF1ab/nsp3425L425LctGctA28P.1.140.000096
ORF1ab/nsp3425L425LctGctA17AY.750.000056
ORF1ab/nsp3425L425LctGctA36AY.230.000209
ORF1ab/nsp3425L425LctGctA56AY.90.000338
ORF1ab/nsp3425L425LctGctA16B.1.36.10.00114
ORF1ab/nsp3425L425LctGctA66P.1.160.002245
ORF1ab/nsp3425L425LctGctA15AY.1170.000085
ORF1ab/nsp3425L425LctGctA45AY.590.002119
ORF1ab/nsp3425L425LctGctA15AY.690.000187
ORF1ab/nsp3425L425LctGctA55B.1.2110.125
ORF1ab/nsp3425L425LctGctA24AY.4.20.000043
ORF1ab/nsp3425L425LctGctA44AY.620.001743
ORF1ab/nsp3425L425LctGctA34B.1.5610.001191
ORF1ab/nsp3425L425LctGctA13A.10.000282
ORF1ab/nsp3425L425LctGctA23AY.1060.00067
ORF1ab/nsp3425L425LctGctA13AY.130.000161
ORF1ab/nsp3425L425LctGctA13AY.540.000095
ORF1ab/nsp3425L425LctGctA33AY.880.002653
ORF1ab/nsp3425L425LctGctA13Q.30.000145
ORF1ab/nsp3425L425LctGctA12AY.340.000097
ORF1ab/nsp3425L425LctGctA22AY.480.00093
ORF1ab/nsp3425L425LctGctA22AY.610.00021
ORF1ab/nsp3425L425LctGctA22AY.670.000929
ORF1ab/nsp3425L425LctGctA22B.1.9.50.011364
ORF1ab/nsp3425L425LctGctA12P.1.10.000318
ORF1ab/nsp3425L425LctGctA11AY.1070.000466
ORF1ab/nsp3425L425LctGctA11AY.300.000396
ORF1ab/nsp3425L425LctGctA11AY.320.000532
ORF1ab/nsp3425L425LctGctA11AY.360.000148
ORF1ab/nsp3425L425LctGctA11AY.39.10.00004
ORF1ab/nsp3425L425LctGctA11AY.4.10.000737
ORF1ab/nsp3425L425LctGctA11AY.4.2.10.000149
ORF1ab/nsp3425L425LctGctA11AY.520.000814
ORF1ab/nsp3425L425LctGctA11AY.530.000288
ORF1ab/nsp3425L425LctGctA11AY.720.001361
ORF1ab/nsp3425L425LctGctA11B.1.1.1700.001247
ORF1ab/nsp3425L425LctGctA11B.1.1.1710.003676
ORF1ab/nsp3425L425LctGctA11B.1.1.3890.006061
ORF1ab/nsp3425L425LctGctA11B.1.258.170.000104
ORF1ab/nsp3425L425LctGctA11B.1.4260.001009
ORF1ab/nsp3425L425LctGctA11B.1.5690.014493
ORF1ab/nsp3425L425LctGctA11C.36.30.000567