CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF1ab/nsp3 : CodonNum = 425 & Codon = Ttg

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF1ab/nsp3425L425LL1243LsynCtgTtg1628916320.100193992-3994

Details of the mutation no within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF1ab/nsp3425L425LCtgTtg163216289All0.000312
ORF1ab/nsp3425L425LCtgTtg1203095B.1.1.70.000107
ORF1ab/nsp3425L425LCtgTtg109565AY.40.00017
ORF1ab/nsp3425L425LCtgTtg283288AY.200.010999
ORF1ab/nsp3425L425LCtgTtg257271P.10.004049
ORF1ab/nsp3425L425LCtgTtg47199B.1.617.20.000177
ORF1ab/nsp3425L425LCtgTtg126159AY.430.000558
ORF1ab/nsp3425L425LCtgTtg36130B.1.10.000653
ORF1ab/nsp3425L425LCtgTtg125125B.1.5640.053237
ORF1ab/nsp3425L425LCtgTtg37118AY.440.000225
ORF1ab/nsp3425L425LCtgTtg35110B.1.1770.000461
ORF1ab/nsp3425L425LCtgTtg12106B.10.00011
ORF1ab/nsp3425L425LCtgTtg6666B.1.1.2910.048998
ORF1ab/nsp3425L425LCtgTtg859AY.1020.000212
ORF1ab/nsp3425L425LCtgTtg1253AY.1030.000075
ORF1ab/nsp3425L425LCtgTtg4349AY.30.000428
ORF1ab/nsp3425L425LCtgTtg448AY.470.000124
ORF1ab/nsp3425L425LCtgTtg234B.1.20.000018
ORF1ab/nsp3425L425LCtgTtg732AY.1000.000322
ORF1ab/nsp3425L425LCtgTtg831AY.250.000048
ORF1ab/nsp3425L425LCtgTtg220AY.99.20.000184
ORF1ab/nsp3425L425LCtgTtg2020AZ.20.01642
ORF1ab/nsp3425L425LCtgTtg2020B.1.5600.092593
ORF1ab/nsp3425L425LCtgTtg418AY.390.000099
ORF1ab/nsp3425L425LCtgTtg818AY.98.10.000387
ORF1ab/nsp3425L425LCtgTtg918B.1.4290.000212
ORF1ab/nsp3425L425LCtgTtg1318P.20.002426
ORF1ab/nsp3425L425LCtgTtg317AY.260.000085
ORF1ab/nsp3425L425LCtgTtg117AY.50.000021
ORF1ab/nsp3425L425LCtgTtg1217B.1.2210.000852
ORF1ab/nsp3425L425LCtgTtg216AY.420.00008
ORF1ab/nsp3425L425LCtgTtg316B.1.360.000438
ORF1ab/nsp3425L425LCtgTtg1116B.1.5260.000259
ORF1ab/nsp3425L425LCtgTtg1115B.1.1.5190.000437
ORF1ab/nsp3425L425LCtgTtg515B.1.3510.000149
ORF1ab/nsp3425L425LCtgTtg114AY.240.000431
ORF1ab/nsp3425L425LCtgTtg114B.1.1600.000031
ORF1ab/nsp3425L425LCtgTtg1111B.1.1.500.007468
ORF1ab/nsp3425L425LCtgTtg210B.1.4270.000101
ORF1ab/nsp3425L425LCtgTtg39AY.290.000047
ORF1ab/nsp3425L425LCtgTtg79B.1.1.2220.001428
ORF1ab/nsp3425L425LCtgTtg68AY.1130.000854
ORF1ab/nsp3425L425LCtgTtg88AY.4.50.00086
ORF1ab/nsp3425L425LCtgTtg38P.1.140.000143
ORF1ab/nsp3425L425LCtgTtg47AY.750.000224
ORF1ab/nsp3425L425LCtgTtg77B.1.1.4640.010309
ORF1ab/nsp3425L425LCtgTtg27B.1.6090.000959
ORF1ab/nsp3425L425LCtgTtg16AY.90.000068
ORF1ab/nsp3425L425LCtgTtg66B.1.2360.01232
ORF1ab/nsp3425L425LCtgTtg56B.1.36.10.005701
ORF1ab/nsp3425L425LCtgTtg16C.370.000116
ORF1ab/nsp3425L425LCtgTtg15AY.1170.000085
ORF1ab/nsp3425L425LCtgTtg35AY.690.00056
ORF1ab/nsp3425L425LCtgTtg55B.1.1.3220.04386
ORF1ab/nsp3425L425LCtgTtg44B.1.1.2140.000222
ORF1ab/nsp3425L425LCtgTtg14B.1.1.280.000311
ORF1ab/nsp3425L425LCtgTtg14B.1.36.290.000517
ORF1ab/nsp3425L425LCtgTtg14B.1.5610.000397
ORF1ab/nsp3425L425LCtgTtg24B.1.617.10.000258
ORF1ab/nsp3425L425LCtgTtg23A.10.000564
ORF1ab/nsp3425L425LCtgTtg23AY.1190.000071
ORF1ab/nsp3425L425LCtgTtg23AY.130.000322
ORF1ab/nsp3425L425LCtgTtg33AY.46.20.001906
ORF1ab/nsp3425L425LCtgTtg23AY.540.000191
ORF1ab/nsp3425L425LCtgTtg23AY.980.000158
ORF1ab/nsp3425L425LCtgTtg13B0.000128
ORF1ab/nsp3425L425LCtgTtg13B.1.1.10.000327
ORF1ab/nsp3425L425LCtgTtg33B.1.1.1210.007282
ORF1ab/nsp3425L425LCtgTtg23B.1.3110.000549
ORF1ab/nsp3425L425LCtgTtg23B.1.6210.000177
ORF1ab/nsp3425L425LCtgTtg33C.360.002732
ORF1ab/nsp3425L425LCtgTtg33N.50.0053
ORF1ab/nsp3425L425LCtgTtg23Q.30.00029
ORF1ab/nsp3425L425LCtgTtg120.055556
ORF1ab/nsp3425L425LCtgTtg12AY.1050.000643
ORF1ab/nsp3425L425LCtgTtg22AY.1160.000574
ORF1ab/nsp3425L425LCtgTtg12AY.116.10.000311
ORF1ab/nsp3425L425LCtgTtg12AY.1200.000037
ORF1ab/nsp3425L425LCtgTtg12AY.340.000097
ORF1ab/nsp3425L425LCtgTtg22B.1.1.30.017391
ORF1ab/nsp3425L425LCtgTtg22B.1.1.5280.009615
ORF1ab/nsp3425L425LCtgTtg22B.1.1110.00235
ORF1ab/nsp3425L425LCtgTtg22B.1.160.70.004158
ORF1ab/nsp3425L425LCtgTtg22B.1.3690.00057
ORF1ab/nsp3425L425LCtgTtg22B.1.4970.00063
ORF1ab/nsp3425L425LCtgTtg22B.1.6370.000146
ORF1ab/nsp3425L425LCtgTtg12D.20.000075
ORF1ab/nsp3425L425LCtgTtg12P.1.10.000318
ORF1ab/nsp3425L425LCtgTtg22P.1.120.000968
ORF1ab/nsp3425L425LCtgTtg11A0.000387
ORF1ab/nsp3425L425LCtgTtg11AY.23.10.000417
ORF1ab/nsp3425L425LCtgTtg11AY.460.000104
ORF1ab/nsp3425L425LCtgTtg11AY.46.40.000165
ORF1ab/nsp3425L425LCtgTtg11AY.700.000209
ORF1ab/nsp3425L425LCtgTtg11AY.920.000287
ORF1ab/nsp3425L425LCtgTtg11AY.950.000761
ORF1ab/nsp3425L425LCtgTtg11B.1.1.2190.005
ORF1ab/nsp3425L425LCtgTtg11B.1.1.2320.001815
ORF1ab/nsp3425L425LCtgTtg11B.1.1.2840.000107
ORF1ab/nsp3425L425LCtgTtg11B.1.1.3260.001761
ORF1ab/nsp3425L425LCtgTtg11B.1.1.4160.000905
ORF1ab/nsp3425L425LCtgTtg11B.1.1.700.000341
ORF1ab/nsp3425L425LCtgTtg11B.1.160.310.008065
ORF1ab/nsp3425L425LCtgTtg11B.1.177.860.000183
ORF1ab/nsp3425L425LCtgTtg11B.1.2400.000216
ORF1ab/nsp3425L425LCtgTtg11B.1.2600.003344
ORF1ab/nsp3425L425LCtgTtg11B.1.3500.002933
ORF1ab/nsp3425L425LCtgTtg11B.1.351.20.000303
ORF1ab/nsp3425L425LCtgTtg11B.1.36.160.001425
ORF1ab/nsp3425L425LCtgTtg11B.1.36.210.00216
ORF1ab/nsp3425L425LCtgTtg11B.1.36.220.001208
ORF1ab/nsp3425L425LCtgTtg11B.1.466.20.000391
ORF1ab/nsp3425L425LCtgTtg11B.1.575.10.002439
ORF1ab/nsp3425L425LCtgTtg11B.1.5770.000687
ORF1ab/nsp3425L425LCtgTtg11B.1.5950.000261
ORF1ab/nsp3425L425LCtgTtg11B.1.5960.000087
ORF1ab/nsp3425L425LCtgTtg11B.1.6230.000536
ORF1ab/nsp3425L425LCtgTtg11B.60.00091
ORF1ab/nsp3425L425LCtgTtg11R.10.00009