CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF1ab/nsp3 : CodonNum = 42 & Codon = Cat

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF1ab/nsp342Y42HY860HnonsynTatCat333312843-2845

Details of the mutation no within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF1ab/nsp342Y42HTatCat3333All0.000006
ORF1ab/nsp342Y42HTatCat55AY.99.20.000461
ORF1ab/nsp342Y42HTatCat44B.1.1.70.000004
ORF1ab/nsp342Y42HTatCat330.166667
ORF1ab/nsp342Y42HTatCat22AY.250.000012
ORF1ab/nsp342Y42HTatCat22AY.4.20.000043
ORF1ab/nsp342Y42HTatCat22AY.440.000012
ORF1ab/nsp342Y42HTatCat22B.1.1.3480.001592
ORF1ab/nsp342Y42HTatCat22B.1.20.000018
ORF1ab/nsp342Y42HTatCat11AY.1030.000006
ORF1ab/nsp342Y42HTatCat11AY.120.000316
ORF1ab/nsp342Y42HTatCat11AY.230.00007
ORF1ab/nsp342Y42HTatCat11AY.260.000028
ORF1ab/nsp342Y42HTatCat11AY.30.00001
ORF1ab/nsp342Y42HTatCat11AY.470.000031
ORF1ab/nsp342Y42HTatCat11B.1.1.2140.000055
ORF1ab/nsp342Y42HTatCat11B.1.2210.000071
ORF1ab/nsp342Y42HTatCat11B.1.3110.000275
ORF1ab/nsp342Y42HTatCat11B.1.617.20.000004
ORF1ab/nsp342Y42HTatCat11B.1.6210.000089