CoV-GLUE | Mutations | Mutation
Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):
ORF | CodonNum | Mut | ORF1abMut | MutType | RefCodon | MutCodon | AACount | CodonCount | CodonProp | Genome Position |
ORF1ab/nsp3 | 415 | K415K | K1233K | syn | aaA | aaG | 1908 | 1908 | 1 | 3962-3964 |
ORF1ab/nsp3 | 415 | K415R | K1233R | nonsyn | aAa | aGa | 262 | 262 | 1 | 3962-3964 |
ORF1ab/nsp3 | 415 | K415Q | K1233Q | nonsyn | Aaa | Caa | 150 | 150 | 1 | 3962-3964 |
ORF1ab/nsp3 | 415 | K415E | K1233E | nonsyn | Aaa | Gaa | 138 | 138 | 1 | 3962-3964 |
ORF1ab/nsp3 | 415 | K415N | K1233N | nonsyn | aaA | aaC | 134 | 91 | 0.679105 | 3962-3964 |
ORF1ab/nsp3 | 415 | K415N | K1233N | nonsyn | aaA | aaT | 134 | 43 | 0.320896 | 3962-3964 |
ORF1ab/nsp3 | 415 | K415del | K1233del | del | AAA | --- | 85 | 85 | 1 | 3962-3964 |
ORF1ab/nsp3 | 415 | K415T | K1233T | nonsyn | aAa | aCa | 35 | 25 | 0.714286 | 3962-3964 |
ORF1ab/nsp3 | 415 | K415T | K1233T | nonsyn | aAA | aCG | 35 | 10 | 0.285714 | 3962-3964 |
ORF1ab/nsp3 | 415 | K415del1 | K1233del1 | del | Aaa | -aa | 12 | 10 | 0.833333 | 3962-3964 |
ORF1ab/nsp3 | 415 | K415del1 | K1233del1 | del | AaA | -aW | 12 | 1 | 0.0833333 | 3962-3964 |
ORF1ab/nsp3 | 415 | K415del1 | K1233del1 | del | AAa | -Ta | 12 | 1 | 0.0833333 | 3962-3964 |
ORF1ab/nsp3 | 415 | K415I | K1233I | nonsyn | aAa | aTa | 10 | 10 | 1 | 3962-3964 |
ORF1ab/nsp3 | 415 | K415X | K1233X | nonsyn | Aaa | Taa | 3 | 3 | 1 | 3962-3964 |
ORF1ab/nsp3 | 415 | K415del2 | K1233del2 | del | AAa | --a | 2 | 2 | 1 | 3962-3964 |
Details of the mutation no within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):
ORF | CodonNum | Mut | RefCodon | MutCodon | CodonCount | AACount | Lineage | LineageCodonProp |
ORF1ab/nsp3 | 415 | K415K | aaA | aaG | 1908 | 1908 | All | 0.000365 |
ORF1ab/nsp3 | 415 | K415K | aaA | aaG | 1694 | 1694 | AY.120 | 0.062981 |
ORF1ab/nsp3 | 415 | K415R | aAa | aGa | 262 | 262 | All | 0.00005 |
ORF1ab/nsp3 | 415 | K415Q | Aaa | Caa | 150 | 150 | All | 0.000029 |
ORF1ab/nsp3 | 415 | K415E | Aaa | Gaa | 138 | 138 | All | 0.000026 |
ORF1ab/nsp3 | 415 | K415N | aaA | aaC | 91 | 134 | All | 0.000017 |
ORF1ab/nsp3 | 415 | K415N | aaA | aaT | 43 | 134 | All | 0.000008 |
ORF1ab/nsp3 | 415 | K415Q | Aaa | Caa | 126 | 126 | AY.5 | 0.002602 |
ORF1ab/nsp3 | 415 | K415E | Aaa | Gaa | 90 | 90 | B.1.2 | 0.000792 |
ORF1ab/nsp3 | 415 | K415del | AAA | --- | 85 | 85 | All | 0.000016 |
ORF1ab/nsp3 | 415 | K415R | aAa | aGa | 81 | 81 | B.1.1.7 | 0.000073 |
ORF1ab/nsp3 | 415 | K415K | aaA | aaG | 62 | 62 | B.1.2 | 0.000546 |
ORF1ab/nsp3 | 415 | K415R | aAa | aGa | 59 | 59 | AY.119 | 0.002083 |
ORF1ab/nsp3 | 415 | K415K | aaA | aaG | 51 | 51 | B.1.1.7 | 0.000046 |
ORF1ab/nsp3 | 415 | K415R | aAa | aGa | 46 | 46 | B.1.160.21 | 0.938776 |
ORF1ab/nsp3 | 415 | K415N | aaA | aaC | 39 | 39 | B.1.1 | 0.000707 |
ORF1ab/nsp3 | 415 | K415T | aAa | aCa | 25 | 35 | All | 0.000005 |
ORF1ab/nsp3 | 415 | K415T | aAA | aCG | 10 | 35 | All | 0.000002 |
ORF1ab/nsp3 | 415 | K415N | aaA | aaT | 25 | 27 | AY.4 | 0.000039 |
ORF1ab/nsp3 | 415 | K415N | aaA | aaC | 2 | 27 | AY.4 | 0.000003 |
ORF1ab/nsp3 | 415 | K415R | aAa | aGa | 24 | 24 | B.1 | 0.00022 |
ORF1ab/nsp3 | 415 | K415K | aaA | aaG | 17 | 17 | B.1 | 0.000156 |
ORF1ab/nsp3 | 415 | K415T | aAa | aCa | 16 | 16 | B.1.1.519 | 0.000635 |
ORF1ab/nsp3 | 415 | K415R | aAa | aGa | 13 | 13 | B.1.340 | 0.055794 |
ORF1ab/nsp3 | 415 | K415del1 | Aaa | -aa | 10 | 12 | All | 0.000002 |
ORF1ab/nsp3 | 415 | K415del1 | AAa | -Ta | 1 | 12 | All | 0 |
ORF1ab/nsp3 | 415 | K415del1 | AaA | -aW | 1 | 12 | All | 0 |
ORF1ab/nsp3 | 415 | K415N | aaA | aaC | 11 | 11 | B.1.1.7 | 0.00001 |
ORF1ab/nsp3 | 415 | K415I | aAa | aTa | 10 | 10 | All | 0.000002 |
ORF1ab/nsp3 | 415 | K415T | aAA | aCG | 10 | 10 | AY.120 | 0.000372 |
ORF1ab/nsp3 | 415 | K415K | aaA | aaG | 10 | 10 | AY.4.2 | 0.000217 |
ORF1ab/nsp3 | 415 | K415del | AAA | --- | 10 | 10 | B.1.1.7 | 0.000009 |
ORF1ab/nsp3 | 415 | K415E | Aaa | Gaa | 9 | 9 | AY.43 | 0.00004 |
ORF1ab/nsp3 | 415 | K415E | Aaa | Gaa | 9 | 9 | AY.44 | 0.000055 |
ORF1ab/nsp3 | 415 | K415N | aaA | aaC | 9 | 9 | B.1.582 | 0.004416 |
ORF1ab/nsp3 | 415 | K415K | aaA | aaG | 8 | 8 | AY.120.2 | 0.010283 |
ORF1ab/nsp3 | 415 | K415K | aaA | aaG | 8 | 8 | B.1.617.2 | 0.00003 |
ORF1ab/nsp3 | 415 | K415E | Aaa | Gaa | 8 | 8 | B.1.617.2 | 0.00003 |
ORF1ab/nsp3 | 415 | K415Q | Aaa | Caa | 8 | 8 | B.1.617.2 | 0.00003 |
ORF1ab/nsp3 | 415 | K415K | aaA | aaG | 7 | 7 | AY.4 | 0.000011 |
ORF1ab/nsp3 | 415 | K415R | aAa | aGa | 7 | 7 | B.1.617.2 | 0.000026 |
ORF1ab/nsp3 | 415 | K415N | aaA | aaT | 7 | 7 | C.37 | 0.000812 |
ORF1ab/nsp3 | 415 | K415I | aAa | aTa | 6 | 6 | AY.4 | 0.000009 |
ORF1ab/nsp3 | 415 | K415del | AAA | --- | 6 | 6 | AY.4 | 0.000009 |
ORF1ab/nsp3 | 415 | K415del1 | Aaa | -aa | 4 | 6 | B.1 | 0.000037 |
ORF1ab/nsp3 | 415 | K415del1 | AAa | -Ta | 1 | 6 | B.1 | 0.000009 |
ORF1ab/nsp3 | 415 | K415del1 | AaA | -aW | 1 | 6 | B.1 | 0.000009 |
ORF1ab/nsp3 | 415 | K415R | aAa | aGa | 6 | 6 | B.1.2 | 0.000053 |
ORF1ab/nsp3 | 415 | K415Q | Aaa | Caa | 5 | 5 | AY.111 | 0.000916 |
ORF1ab/nsp3 | 415 | K415del | AAA | --- | 5 | 5 | AY.54 | 0.000477 |
ORF1ab/nsp3 | 415 | K415R | aAa | aGa | 5 | 5 | B.1.1 | 0.000091 |
ORF1ab/nsp3 | 415 | K415K | aaA | aaG | 5 | 5 | B.1.177 | 0.000066 |
ORF1ab/nsp3 | 415 | K415N | aaA | aaC | 5 | 5 | B.1.177.87 | 0.003639 |
ORF1ab/nsp3 | 415 | K415N | aaA | aaC | 4 | 4 | AY.25 | 0.000024 |
ORF1ab/nsp3 | 415 | K415del | AAA | --- | 4 | 4 | AY.3 | 0.00004 |
ORF1ab/nsp3 | 415 | K415R | aAa | aGa | 4 | 4 | AY.4 | 0.000006 |
ORF1ab/nsp3 | 415 | K415del | AAA | --- | 4 | 4 | B.1.2 | 0.000035 |
ORF1ab/nsp3 | 415 | K415del | AAA | --- | 4 | 4 | B.1.596 | 0.000349 |
ORF1ab/nsp3 | 415 | K415E | Aaa | Gaa | 4 | 4 | B.1.617.1 | 0.000516 |
ORF1ab/nsp3 | 415 | K415del | AAA | --- | 4 | 4 | P.1 | 0.000063 |
ORF1ab/nsp3 | 415 | K415X | Aaa | Taa | 3 | 3 | All | 0.000001 |
ORF1ab/nsp3 | 415 | K415N | aaA | aaC | 3 | 3 | AY.1 | 0.001187 |
ORF1ab/nsp3 | 415 | K415Q | Aaa | Caa | 3 | 3 | AY.103 | 0.000019 |
ORF1ab/nsp3 | 415 | K415Q | Aaa | Caa | 3 | 3 | B.1.1.7 | 0.000003 |
ORF1ab/nsp3 | 415 | K415E | Aaa | Gaa | 3 | 3 | B.1.1.7 | 0.000003 |
ORF1ab/nsp3 | 415 | K415N | aaA | aaC | 3 | 3 | B.1.436 | 0.003086 |
ORF1ab/nsp3 | 415 | K415del | AAA | --- | 3 | 3 | B.1.617.2 | 0.000011 |
ORF1ab/nsp3 | 415 | K415K | aaA | aaG | 3 | 3 | P.1 | 0.000047 |
ORF1ab/nsp3 | 415 | K415K | aaA | aaG | 2 | 2 | A.2.5.2 | 0.003145 |
ORF1ab/nsp3 | 415 | K415del2 | AAa | --a | 2 | 2 | All | 0 |
ORF1ab/nsp3 | 415 | K415K | aaA | aaG | 2 | 2 | AY.102 | 0.000053 |
ORF1ab/nsp3 | 415 | K415K | aaA | aaG | 2 | 2 | AY.114 | 0.000462 |
ORF1ab/nsp3 | 415 | K415K | aaA | aaG | 2 | 2 | AY.118 | 0.000125 |
ORF1ab/nsp3 | 415 | K415N | aaA | aaT | 2 | 2 | AY.120 | 0.000074 |
ORF1ab/nsp3 | 415 | K415R | aAa | aGa | 2 | 2 | AY.25 | 0.000012 |
ORF1ab/nsp3 | 415 | K415del | AAA | --- | 2 | 2 | AY.4.5 | 0.000215 |
ORF1ab/nsp3 | 415 | K415del | AAA | --- | 2 | 2 | AY.43 | 0.000009 |
ORF1ab/nsp3 | 415 | K415T | aAa | aCa | 2 | 2 | AY.44 | 0.000012 |
ORF1ab/nsp3 | 415 | K415R | aAa | aGa | 2 | 2 | AY.48 | 0.00093 |
ORF1ab/nsp3 | 415 | K415K | aaA | aaG | 2 | 2 | AY.5 | 0.000041 |
ORF1ab/nsp3 | 415 | K415del | AAA | --- | 2 | 2 | B.1 | 0.000018 |
ORF1ab/nsp3 | 415 | K415N | aaA | aaT | 2 | 2 | B.1 | 0.000018 |
ORF1ab/nsp3 | 415 | K415del | AAA | --- | 2 | 2 | B.1.1 | 0.000036 |
ORF1ab/nsp3 | 415 | K415E | Aaa | Gaa | 2 | 2 | B.1.1 | 0.000036 |
ORF1ab/nsp3 | 415 | K415I | aAa | aTa | 2 | 2 | B.1.1.7 | 0.000002 |
ORF1ab/nsp3 | 415 | K415R | aAa | aGa | 2 | 2 | B.1.160 | 0.000062 |
ORF1ab/nsp3 | 415 | K415del | AAA | --- | 2 | 2 | B.1.177 | 0.000026 |
ORF1ab/nsp3 | 415 | K415del | AAA | --- | 2 | 2 | B.1.177.4 | 0.000422 |
ORF1ab/nsp3 | 415 | K415N | aaA | aaT | 2 | 2 | B.1.2 | 0.000018 |
ORF1ab/nsp3 | 415 | K415T | aAa | aCa | 2 | 2 | B.1.2 | 0.000018 |
ORF1ab/nsp3 | 415 | K415del | AAA | --- | 2 | 2 | B.1.258.17 | 0.000208 |
ORF1ab/nsp3 | 415 | K415R | aAa | aGa | 2 | 2 | B.1.429 | 0.000047 |
ORF1ab/nsp3 | 415 | K415del | AAA | --- | 2 | 2 | B.1.526 | 0.000047 |
ORF1ab/nsp3 | 415 | K415N | aaA | aaC | 2 | 2 | B.1.555 | 0.044444 |
ORF1ab/nsp3 | 415 | K415K | aaA | aaG | 2 | 2 | B.1.596 | 0.000174 |
ORF1ab/nsp3 | 415 | K415del | AAA | --- | 2 | 2 | B.1.621 | 0.000177 |
ORF1ab/nsp3 | 415 | K415del1 | Aaa | -aa | 2 | 2 | B.1.627 | 0.00404 |
ORF1ab/nsp3 | 415 | K415K | aaA | aaG | 2 | 2 | C.9 | 0.060606 |
ORF1ab/nsp3 | 415 | K415del | AAA | --- | 2 | 2 | P.1.12 | 0.000968 |
ORF1ab/nsp3 | 415 | K415del | AAA | --- | 1 | 1 | A | 0.000387 |
ORF1ab/nsp3 | 415 | K415N | aaA | aaC | 1 | 1 | A | 0.000387 |
ORF1ab/nsp3 | 415 | K415del1 | Aaa | -aa | 1 | 1 | A | 0.000387 |
ORF1ab/nsp3 | 415 | K415I | aAa | aTa | 1 | 1 | AY.102 | 0.000027 |
ORF1ab/nsp3 | 415 | K415N | aaA | aaC | 1 | 1 | AY.102 | 0.000027 |
ORF1ab/nsp3 | 415 | K415T | aAa | aCa | 1 | 1 | AY.102 | 0.000027 |
ORF1ab/nsp3 | 415 | K415K | aaA | aaG | 1 | 1 | AY.103 | 0.000006 |
ORF1ab/nsp3 | 415 | K415R | aAa | aGa | 1 | 1 | AY.103 | 0.000006 |
ORF1ab/nsp3 | 415 | K415E | Aaa | Gaa | 1 | 1 | AY.119 | 0.000035 |
ORF1ab/nsp3 | 415 | K415E | Aaa | Gaa | 1 | 1 | AY.120.1 | 0.000321 |
ORF1ab/nsp3 | 415 | K415K | aaA | aaG | 1 | 1 | AY.20 | 0.000039 |
ORF1ab/nsp3 | 415 | K415N | aaA | aaT | 1 | 1 | AY.22 | 0.002092 |
ORF1ab/nsp3 | 415 | K415N | aaA | aaC | 1 | 1 | AY.23 | 0.00007 |
ORF1ab/nsp3 | 415 | K415E | Aaa | Gaa | 1 | 1 | AY.25 | 0.000006 |
ORF1ab/nsp3 | 415 | K415K | aaA | aaG | 1 | 1 | AY.26 | 0.000028 |
ORF1ab/nsp3 | 415 | K415N | aaA | aaC | 1 | 1 | AY.29 | 0.000016 |
ORF1ab/nsp3 | 415 | K415K | aaA | aaG | 1 | 1 | AY.3 | 0.00001 |
ORF1ab/nsp3 | 415 | K415del | AAA | --- | 1 | 1 | AY.3.1 | 0.000085 |
ORF1ab/nsp3 | 415 | K415K | aaA | aaG | 1 | 1 | AY.30 | 0.000396 |
ORF1ab/nsp3 | 415 | K415E | Aaa | Gaa | 1 | 1 | AY.33 | 0.000067 |
ORF1ab/nsp3 | 415 | K415K | aaA | aaG | 1 | 1 | AY.33 | 0.000067 |
ORF1ab/nsp3 | 415 | K415K | aaA | aaG | 1 | 1 | AY.36 | 0.000148 |
ORF1ab/nsp3 | 415 | K415del | AAA | --- | 1 | 1 | AY.36 | 0.000148 |
ORF1ab/nsp3 | 415 | K415N | aaA | aaT | 1 | 1 | AY.37 | 0.000316 |
ORF1ab/nsp3 | 415 | K415E | Aaa | Gaa | 1 | 1 | AY.39 | 0.000025 |
ORF1ab/nsp3 | 415 | K415E | Aaa | Gaa | 1 | 1 | AY.4 | 0.000002 |
ORF1ab/nsp3 | 415 | K415X | Aaa | Taa | 1 | 1 | AY.4 | 0.000002 |
ORF1ab/nsp3 | 415 | K415K | aaA | aaG | 1 | 1 | AY.42 | 0.00004 |
ORF1ab/nsp3 | 415 | K415R | aAa | aGa | 1 | 1 | AY.43 | 0.000004 |
ORF1ab/nsp3 | 415 | K415K | aaA | aaG | 1 | 1 | AY.43 | 0.000004 |
ORF1ab/nsp3 | 415 | K415Q | Aaa | Caa | 1 | 1 | AY.43 | 0.000004 |
ORF1ab/nsp3 | 415 | K415N | aaA | aaT | 1 | 1 | AY.44 | 0.000006 |
ORF1ab/nsp3 | 415 | K415Q | Aaa | Caa | 1 | 1 | AY.44 | 0.000006 |
ORF1ab/nsp3 | 415 | K415K | aaA | aaG | 1 | 1 | AY.44 | 0.000006 |
ORF1ab/nsp3 | 415 | K415R | aAa | aGa | 1 | 1 | AY.44 | 0.000006 |
ORF1ab/nsp3 | 415 | K415K | aaA | aaG | 1 | 1 | AY.46 | 0.000104 |
ORF1ab/nsp3 | 415 | K415del | AAA | --- | 1 | 1 | AY.46.2 | 0.000635 |
ORF1ab/nsp3 | 415 | K415R | aAa | aGa | 1 | 1 | AY.47 | 0.000031 |
ORF1ab/nsp3 | 415 | K415E | Aaa | Gaa | 1 | 1 | AY.5 | 0.000021 |
ORF1ab/nsp3 | 415 | K415Q | Aaa | Caa | 1 | 1 | AY.5.4 | 0.000277 |
ORF1ab/nsp3 | 415 | K415E | Aaa | Gaa | 1 | 1 | AY.50 | 0.000799 |
ORF1ab/nsp3 | 415 | K415K | aaA | aaG | 1 | 1 | AY.7 | 0.000196 |
ORF1ab/nsp3 | 415 | K415K | aaA | aaG | 1 | 1 | AY.75 | 0.000056 |
ORF1ab/nsp3 | 415 | K415del | AAA | --- | 1 | 1 | AY.75.1 | 0.00018 |
ORF1ab/nsp3 | 415 | K415N | aaA | aaC | 1 | 1 | AY.8 | 0.000606 |
ORF1ab/nsp3 | 415 | K415E | Aaa | Gaa | 1 | 1 | AY.9 | 0.000068 |
ORF1ab/nsp3 | 415 | K415K | aaA | aaG | 1 | 1 | AY.9.2 | 0.000037 |
ORF1ab/nsp3 | 415 | K415E | Aaa | Gaa | 1 | 1 | AY.9.2 | 0.000037 |
ORF1ab/nsp3 | 415 | K415K | aaA | aaG | 1 | 1 | AY.98 | 0.000079 |
ORF1ab/nsp3 | 415 | K415T | aAa | aCa | 1 | 1 | B.1.1 | 0.000018 |
ORF1ab/nsp3 | 415 | K415del1 | Aaa | -aa | 1 | 1 | B.1.1 | 0.000018 |
ORF1ab/nsp3 | 415 | K415del | AAA | --- | 1 | 1 | B.1.1.1 | 0.000327 |
ORF1ab/nsp3 | 415 | K415del | AAA | --- | 1 | 1 | B.1.1.192 | 0.002309 |
ORF1ab/nsp3 | 415 | K415K | aaA | aaG | 1 | 1 | B.1.1.216 | 0.00089 |
ORF1ab/nsp3 | 415 | K415del | AAA | --- | 1 | 1 | B.1.1.222 | 0.000204 |
ORF1ab/nsp3 | 415 | K415Q | Aaa | Caa | 1 | 1 | B.1.1.244 | 0.015385 |
ORF1ab/nsp3 | 415 | K415del | AAA | --- | 1 | 1 | B.1.1.301 | 0.001179 |
ORF1ab/nsp3 | 415 | K415del | AAA | --- | 1 | 1 | B.1.1.316 | 0.000925 |
ORF1ab/nsp3 | 415 | K415del | AAA | --- | 1 | 1 | B.1.1.33 | 0.000421 |
ORF1ab/nsp3 | 415 | K415del | AAA | --- | 1 | 1 | B.1.1.337 | 0.003597 |
ORF1ab/nsp3 | 415 | K415K | aaA | aaG | 1 | 1 | B.1.1.371 | 0.010417 |
ORF1ab/nsp3 | 415 | K415E | Aaa | Gaa | 1 | 1 | B.1.1.39 | 0.00051 |
ORF1ab/nsp3 | 415 | K415del | AAA | --- | 1 | 1 | B.1.1.519 | 0.00004 |
ORF1ab/nsp3 | 415 | K415del2 | AAa | --a | 1 | 1 | B.1.1.7 | 0.000001 |
ORF1ab/nsp3 | 415 | K415T | aAa | aCa | 1 | 1 | B.1.1.7 | 0.000001 |
ORF1ab/nsp3 | 415 | K415X | Aaa | Taa | 1 | 1 | B.1.128 | 0.000635 |
ORF1ab/nsp3 | 415 | K415N | aaA | aaC | 1 | 1 | B.1.160 | 0.000031 |
ORF1ab/nsp3 | 415 | K415K | aaA | aaG | 1 | 1 | B.1.160.12 | 0.00641 |
ORF1ab/nsp3 | 415 | K415E | Aaa | Gaa | 1 | 1 | B.1.160.26 | 0.002421 |
ORF1ab/nsp3 | 415 | K415N | aaA | aaC | 1 | 1 | B.1.177 | 0.000013 |
ORF1ab/nsp3 | 415 | K415R | aAa | aGa | 1 | 1 | B.1.177.10 | 0.000878 |
ORF1ab/nsp3 | 415 | K415del | AAA | --- | 1 | 1 | B.1.177.16 | 0.000664 |
ORF1ab/nsp3 | 415 | K415N | aaA | aaC | 1 | 1 | B.1.177.81 | 0.000189 |
ORF1ab/nsp3 | 415 | K415Q | Aaa | Caa | 1 | 1 | B.1.2 | 0.000009 |
ORF1ab/nsp3 | 415 | K415del1 | Aaa | -aa | 1 | 1 | B.1.2 | 0.000009 |
ORF1ab/nsp3 | 415 | K415del2 | AAa | --a | 1 | 1 | B.1.2 | 0.000009 |
ORF1ab/nsp3 | 415 | K415R | aAa | aGa | 1 | 1 | B.1.221 | 0.000071 |
ORF1ab/nsp3 | 415 | K415del | AAA | --- | 1 | 1 | B.1.221 | 0.000071 |
ORF1ab/nsp3 | 415 | K415K | aaA | aaG | 1 | 1 | B.1.221 | 0.000071 |
ORF1ab/nsp3 | 415 | K415T | aAa | aCa | 1 | 1 | B.1.221 | 0.000071 |
ORF1ab/nsp3 | 415 | K415E | Aaa | Gaa | 1 | 1 | B.1.243 | 0.00007 |
ORF1ab/nsp3 | 415 | K415N | aaA | aaC | 1 | 1 | B.1.243 | 0.00007 |
ORF1ab/nsp3 | 415 | K415N | aaA | aaC | 1 | 1 | B.1.258 | 0.000067 |
ORF1ab/nsp3 | 415 | K415K | aaA | aaG | 1 | 1 | B.1.324 | 0.001605 |
ORF1ab/nsp3 | 415 | K415K | aaA | aaG | 1 | 1 | B.1.351 | 0.00003 |
ORF1ab/nsp3 | 415 | K415T | aAa | aCa | 1 | 1 | B.1.36 | 0.000146 |
ORF1ab/nsp3 | 415 | K415del | AAA | --- | 1 | 1 | B.1.36 | 0.000146 |
ORF1ab/nsp3 | 415 | K415del | AAA | --- | 1 | 1 | B.1.36.16 | 0.001425 |
ORF1ab/nsp3 | 415 | K415N | aaA | aaC | 1 | 1 | B.1.367 | 0.000792 |
ORF1ab/nsp3 | 415 | K415del | AAA | --- | 1 | 1 | B.1.427 | 0.00005 |
ORF1ab/nsp3 | 415 | K415del | AAA | --- | 1 | 1 | B.1.429 | 0.000024 |
ORF1ab/nsp3 | 415 | K415K | aaA | aaG | 1 | 1 | B.1.462 | 0.007246 |
ORF1ab/nsp3 | 415 | K415N | aaA | aaC | 1 | 1 | B.1.466.2 | 0.000391 |
ORF1ab/nsp3 | 415 | K415K | aaA | aaG | 1 | 1 | B.1.525 | 0.000113 |
ORF1ab/nsp3 | 415 | K415R | aAa | aGa | 1 | 1 | B.1.526 | 0.000024 |
ORF1ab/nsp3 | 415 | K415K | aaA | aaG | 1 | 1 | B.1.561 | 0.000397 |
ORF1ab/nsp3 | 415 | K415del | AAA | --- | 1 | 1 | B.1.595 | 0.000261 |
ORF1ab/nsp3 | 415 | K415N | aaA | aaT | 1 | 1 | B.1.617.2 | 0.000004 |
ORF1ab/nsp3 | 415 | K415del1 | Aaa | -aa | 1 | 1 | B.1.617.2 | 0.000004 |
ORF1ab/nsp3 | 415 | K415N | aaA | aaC | 1 | 1 | B.1.623 | 0.000536 |
ORF1ab/nsp3 | 415 | K415K | aaA | aaG | 1 | 1 | B.1.625 | 0.002353 |
ORF1ab/nsp3 | 415 | K415K | aaA | aaG | 1 | 1 | B.1.94 | 0.027027 |
ORF1ab/nsp3 | 415 | K415del | AAA | --- | 1 | 1 | B.57 | 0.015152 |
ORF1ab/nsp3 | 415 | K415K | aaA | aaG | 1 | 1 | B.61 | 0.005747 |
ORF1ab/nsp3 | 415 | K415K | aaA | aaG | 1 | 1 | D.2 | 0.000075 |
ORF1ab/nsp3 | 415 | K415K | aaA | aaG | 1 | 1 | N.5 | 0.001767 |
ORF1ab/nsp3 | 415 | K415R | aAa | aGa | 1 | 1 | N.5 | 0.001767 |
ORF1ab/nsp3 | 415 | K415del | AAA | --- | 1 | 1 | N.6 | 0.007092 |
ORF1ab/nsp3 | 415 | K415X | Aaa | Taa | 1 | 1 | P.1 | 0.000016 |
ORF1ab/nsp3 | 415 | K415I | aAa | aTa | 1 | 1 | P.1 | 0.000016 |
ORF1ab/nsp3 | 415 | K415N | aaA | aaT | 1 | 1 | P.1.1 | 0.000318 |
ORF1ab/nsp3 | 415 | K415del | AAA | --- | 1 | 1 | P.1.14 | 0.000048 |
ORF1ab/nsp3 | 415 | K415R | aAa | aGa | 1 | 1 | Q.7 | 0.001111 |
ORF1ab/nsp3 | 415 | K415del | AAA | --- | 1 | 1 | R.1 | 0.00009 |
ORF1ab/nsp3 | 415 | K415del | AAA | --- | 1 | 1 | U.3 | 0.003861 |
CoV-GLUE is still in development. CoV-GLUE was originally developed as part of COG-UK by Josh Singer using the GLUE framework at the MRC-University of Glasgow Centre for Virus Research (CVR). In 2021 it was redeveloped by Richard Orton to scale to the millions of genome sequences available. We acknowledge support from the MRC (MC_UU_12014/12), WT (220977/Z/20/Z) and UKRI G2P (MR/W005611/1). Please contact Richard Orton with any queries: Richard.Orton@glasgow.ac.uk
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