CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF1ab/nsp3 : CodonNum = 414 & Codon = aCc

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF1ab/nsp3414I414TI1232TnonsynaTcaCc1234123413959-3961

Details of the mutation no within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF1ab/nsp3414I414TaTcaCc12341234All0.000236
ORF1ab/nsp3414I414TaTcaCc534534AY.250.003212
ORF1ab/nsp3414I414TaTcaCc224224B.1.617.20.000843
ORF1ab/nsp3414I414TaTcaCc108108AY.1020.002864
ORF1ab/nsp3414I414TaTcaCc103103B.1.20.000907
ORF1ab/nsp3414I414TaTcaCc5050AY.430.000222
ORF1ab/nsp3414I414TaTcaCc4545B.1.1.70.00004
ORF1ab/nsp3414I414TaTcaCc2929A.23.10.020423
ORF1ab/nsp3414I414TaTcaCc1414AY.40.000022
ORF1ab/nsp3414I414TaTcaCc1313AY.440.000079
ORF1ab/nsp3414I414TaTcaCc99AY.1030.000056
ORF1ab/nsp3414I414TaTcaCc99AY.390.000222
ORF1ab/nsp3414I414TaTcaCc66AY.230.000418
ORF1ab/nsp3414I414TaTcaCc55AY.200.000194
ORF1ab/nsp3414I414TaTcaCc55AY.460.00052
ORF1ab/nsp3414I414TaTcaCc55B.1.1460.021186
ORF1ab/nsp3414I414TaTcaCc44AY.3.10.000341
ORF1ab/nsp3414I414TaTcaCc44AY.360.000593
ORF1ab/nsp3414I414TaTcaCc44B.1.177.860.000734
ORF1ab/nsp3414I414TaTcaCc44P.10.000063
ORF1ab/nsp3414I414TaTcaCc33AY.1170.000254
ORF1ab/nsp3414I414TaTcaCc33AY.330.0002
ORF1ab/nsp3414I414TaTcaCc22AY.1160.000574
ORF1ab/nsp3414I414TaTcaCc22AY.30.00002
ORF1ab/nsp3414I414TaTcaCc22AY.600.001876
ORF1ab/nsp3414I414TaTcaCc22AY.750.000112
ORF1ab/nsp3414I414TaTcaCc22AY.75.10.000361
ORF1ab/nsp3414I414TaTcaCc22AY.840.000875
ORF1ab/nsp3414I414TaTcaCc22AY.980.000158
ORF1ab/nsp3414I414TaTcaCc22B.1.1.5190.000079
ORF1ab/nsp3414I414TaTcaCc22B.1.258.30.00335
ORF1ab/nsp3414I414TaTcaCc11AY.1000.000046
ORF1ab/nsp3414I414TaTcaCc11AY.1110.000183
ORF1ab/nsp3414I414TaTcaCc11AY.140.000088
ORF1ab/nsp3414I414TaTcaCc11AY.240.000431
ORF1ab/nsp3414I414TaTcaCc11AY.270.000065
ORF1ab/nsp3414I414TaTcaCc11AY.290.000016
ORF1ab/nsp3414I414TaTcaCc11AY.29.10.000221
ORF1ab/nsp3414I414TaTcaCc11AY.300.000396
ORF1ab/nsp3414I414TaTcaCc11AY.4.2.10.000149
ORF1ab/nsp3414I414TaTcaCc11AY.410.000294
ORF1ab/nsp3414I414TaTcaCc11AY.420.00004
ORF1ab/nsp3414I414TaTcaCc11AY.450.000122
ORF1ab/nsp3414I414TaTcaCc11AY.46.30.000934
ORF1ab/nsp3414I414TaTcaCc11AY.50.000021
ORF1ab/nsp3414I414TaTcaCc11AY.5.40.000277
ORF1ab/nsp3414I414TaTcaCc11AY.740.000116
ORF1ab/nsp3414I414TaTcaCc11AY.9.10.000084
ORF1ab/nsp3414I414TaTcaCc11AY.99.20.000092
ORF1ab/nsp3414I414TaTcaCc11B.10.000009
ORF1ab/nsp3414I414TaTcaCc11B.1.1600.000031
ORF1ab/nsp3414I414TaTcaCc11B.1.1770.000013
ORF1ab/nsp3414I414TaTcaCc11B.1.177.570.000281
ORF1ab/nsp3414I414TaTcaCc11B.1.2580.000067
ORF1ab/nsp3414I414TaTcaCc11B.1.258.220.002667
ORF1ab/nsp3414I414TaTcaCc11B.1.36.290.000517
ORF1ab/nsp3414I414TaTcaCc11B.1.4290.000024
ORF1ab/nsp3414I414TaTcaCc11B.1.4680.005714
ORF1ab/nsp3414I414TaTcaCc11B.1.5260.000024
ORF1ab/nsp3414I414TaTcaCc11B.1.5610.000397
ORF1ab/nsp3414I414TaTcaCc11B.1.5960.000087
ORF1ab/nsp3414I414TaTcaCc11B.1.6280.000352
ORF1ab/nsp3414I414TaTcaCc11B.3.10.001658
ORF1ab/nsp3414I414TaTcaCc11C.10.002392
ORF1ab/nsp3414I414TaTcaCc11P.1.140.000048
ORF1ab/nsp3414I414TaTcaCc11Q.10.000126