CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF1ab/nsp3 : CodonNum = 41 & Codon = gTc

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF1ab/nsp341A41VA859VnonsyngCcgTc881188040.9992062840-2842

Details of the mutation no within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF1ab/nsp341A41VgCcgTc88048811All0.001684
ORF1ab/nsp341A41VgCcgTc26142614B.1.1.70.00234
ORF1ab/nsp341A41VgCcgTc16751680C.36.30.950085
ORF1ab/nsp341A41VgCcgTc16721672P.1.100.450552
ORF1ab/nsp341A41VgCcgTc560560C.360.510018
ORF1ab/nsp341A41VgCcgTc360360AY.290.005679
ORF1ab/nsp341A41VgCcgTc306306C.36.3.10.831522
ORF1ab/nsp341A41VgCcgTc189189AY.40.000294
ORF1ab/nsp341A41VgCcgTc127127B.1.617.20.000478
ORF1ab/nsp341A41VgCcgTc8181P.1.10.10.658537
ORF1ab/nsp341A41VgCcgTc7575AY.470.002333
ORF1ab/nsp341A41VgCcgTc6666P.10.00104
ORF1ab/nsp341A41VgCcgTc5959AY.30.000587
ORF1ab/nsp341A41VgCcgTc5151B.1.20.000449
ORF1ab/nsp341A41VgCcgTc4949AY.390.001211
ORF1ab/nsp341A41VgCcgTc4747AY.1020.001246
ORF1ab/nsp341A41VgCcgTc4747AY.130.007566
ORF1ab/nsp341A41VgCcgTc4545B.1.2430.003131
ORF1ab/nsp341A41VgCcgTc4343B.1.1.3330.046286
ORF1ab/nsp341A41VgCcgTc4242AY.250.000253
ORF1ab/nsp341A41VgCcgTc3737B.10.000339
ORF1ab/nsp341A41VgCcgTc2929B.1.10.000526
ORF1ab/nsp341A41VgCcgTc2929B.1.160.250.322222
ORF1ab/nsp341A41VgCcgTc2929B.1.5260.000682
ORF1ab/nsp341A41VgCcgTc2525AY.440.000152
ORF1ab/nsp341A41VgCcgTc2323B.1.930.021475
ORF1ab/nsp341A41VgCcgTc2121B.1.1600.000655
ORF1ab/nsp341A41VgCcgTc2020AY.430.000089
ORF1ab/nsp341A41VgCcgTc1919B.1.6210.001682
ORF1ab/nsp341A41VgCcgTc1818AY.750.001008
ORF1ab/nsp341A41VgCcgTc1818B.1.2210.001279
ORF1ab/nsp341A41VgCcgTc1818B.1.3510.000535
ORF1ab/nsp341A41VgCcgTc1414AY.1030.000087
ORF1ab/nsp341A41VgCcgTc1414B.1.351.50.008393
ORF1ab/nsp341A41VgCcgTc1313B.1.4290.000306
ORF1ab/nsp341A41VgCcgTc1212B.1.1770.000158
ORF1ab/nsp341A41VgCcgTc1111B.1.5250.001245
ORF1ab/nsp341A41VgCcgTc1010AY.4.20.000217
ORF1ab/nsp341A41VgCcgTc1010B.1.36.80.01
ORF1ab/nsp341A41VgCcgTc1010C.370.001161
ORF1ab/nsp341A41VgCcgTc99AY.50.000186
ORF1ab/nsp341A41VgCcgTc99AY.610.000943
ORF1ab/nsp341A41VgCcgTc99B.1.1.3160.008326
ORF1ab/nsp341A41VgCcgTc88AY.260.000226
ORF1ab/nsp341A41VgCcgTc88Q.80.001319
ORF1ab/nsp341A41VgCcgTc77AY.9.10.000586
ORF1ab/nsp341A41VgCcgTc77B.1.177.810.001325
ORF1ab/nsp341A41VgCcgTc77B.1.5960.00061
ORF1ab/nsp341A41VgCcgTc77B.1.617.10.000903
ORF1ab/nsp341A41VgCcgTc66B.1.1.5190.000238
ORF1ab/nsp341A41VgCcgTc66B.1.177.520.010545
ORF1ab/nsp341A41VgCcgTc66B.1.3110.001647
ORF1ab/nsp341A41VgCcgTc66P.1.140.000287
ORF1ab/nsp341A41VgCcgTc55AY.1200.000186
ORF1ab/nsp341A41VgCcgTc55AY.200.000194
ORF1ab/nsp341A41VgCcgTc55AY.29.10.001103
ORF1ab/nsp341A41VgCcgTc55AY.450.000608
ORF1ab/nsp341A41VgCcgTc55AY.620.002179
ORF1ab/nsp341A41VgCcgTc55AY.840.002187
ORF1ab/nsp341A41VgCcgTc55B.1.1.2140.000277
ORF1ab/nsp341A41VgCcgTc55B.1.230.030303
ORF1ab/nsp341A41VgCcgTc55B.1.36.160.007123
ORF1ab/nsp341A41VgCcgTc44A.2.50.001996
ORF1ab/nsp341A41VgCcgTc44AY.120.10.001284
ORF1ab/nsp341A41VgCcgTc44AY.3.10.000341
ORF1ab/nsp341A41VgCcgTc44AY.560.006421
ORF1ab/nsp341A41VgCcgTc44B.1.214.20.002398
ORF1ab/nsp341A41VgCcgTc44B.1.5650.003241
ORF1ab/nsp341A41VgCcgTc44B.1.780.034188
ORF1ab/nsp341A41VgCcgTc44C.170.222222
ORF1ab/nsp341A41VgCcgTc33AD.20.000657
ORF1ab/nsp341A41VgCcgTc33AY.1000.000138
ORF1ab/nsp341A41VgCcgTc33AY.460.000312
ORF1ab/nsp341A41VgCcgTc33B0.000383
ORF1ab/nsp341A41VgCcgTc33B.1.1.2940.003797
ORF1ab/nsp341A41VgCcgTc33B.1.1.3030.008287
ORF1ab/nsp341A41VgCcgTc33B.1.177.600.000655
ORF1ab/nsp341A41VgCcgTc33B.1.2340.000396
ORF1ab/nsp341A41VgCcgTc33B.1.36.290.001552
ORF1ab/nsp341A41VgCcgTc33B.1.4270.000151
ORF1ab/nsp341A41VgCcgTc33C.390.056604
ORF1ab/nsp341A41VgCcgTc33P.1.160.001122
ORF1ab/nsp341A41VgCcgTc22A.23.10.001408
ORF1ab/nsp341A41VgCcgTc22AY.1160.000574
ORF1ab/nsp341A41VgCcgTc22AY.1190.000071
ORF1ab/nsp341A41VgCcgTc22AY.140.000176
ORF1ab/nsp341A41VgCcgTc22AY.230.000139
ORF1ab/nsp341A41VgCcgTc22AY.4.40.000818
ORF1ab/nsp341A41VgCcgTc22AY.46.40.000329
ORF1ab/nsp341A41VgCcgTc22AY.5.40.000553
ORF1ab/nsp341A41VgCcgTc22AY.650.001066
ORF1ab/nsp341A41VgCcgTc22B.1.1.10.000653
ORF1ab/nsp341A41VgCcgTc22B.1.1.3180.000604
ORF1ab/nsp341A41VgCcgTc22B.1.177.650.001331
ORF1ab/nsp341A41VgCcgTc22B.1.2580.000133
ORF1ab/nsp341A41VgCcgTc22B.1.4230.020408
ORF1ab/nsp341A41VgCcgTc22B.1.4280.002041
ORF1ab/nsp341A41VgCcgTc22B.1.466.20.000782
ORF1ab/nsp341A41VgCcgTc22B.1.810.042553
ORF1ab/nsp341A41VgCcgTc22C.40.02
ORF1ab/nsp341A41VgCcgTc22P.1.10.000635
ORF1ab/nsp341A41VgCcgTc22P.1.150.000465
ORF1ab/nsp341A41VgCcgTc22P.20.000373
ORF1ab/nsp341A41VgCcgTc11A0.000387
ORF1ab/nsp341A41VgCcgTc11AY.10.000396
ORF1ab/nsp341A41VgCcgTc11AY.1010.00049
ORF1ab/nsp341A41VgCcgTc11AY.1110.000183
ORF1ab/nsp341A41VgCcgTc11AY.1130.000142
ORF1ab/nsp341A41VgCcgTc11AY.320.000532
ORF1ab/nsp341A41VgCcgTc11AY.360.000148
ORF1ab/nsp341A41VgCcgTc11AY.380.000499
ORF1ab/nsp341A41VgCcgTc11AY.420.00004
ORF1ab/nsp341A41VgCcgTc11AY.46.20.000635
ORF1ab/nsp341A41VgCcgTc11AY.480.000465
ORF1ab/nsp341A41VgCcgTc11AY.520.000814
ORF1ab/nsp341A41VgCcgTc11AY.540.000095
ORF1ab/nsp341A41VgCcgTc11AY.550.000917
ORF1ab/nsp341A41VgCcgTc11AY.590.00053
ORF1ab/nsp341A41VgCcgTc11AY.670.000464
ORF1ab/nsp341A41VgCcgTc11AY.7.10.000113
ORF1ab/nsp341A41VgCcgTc11AY.75.10.00018
ORF1ab/nsp341A41VgCcgTc11AY.850.000427
ORF1ab/nsp341A41VgCcgTc11AY.9.2.10.001976
ORF1ab/nsp341A41VgCcgTc11AY.980.000079
ORF1ab/nsp341A41VgCcgTc11AY.98.10.000048
ORF1ab/nsp341A41VgCcgTc11AY.99.20.000092
ORF1ab/nsp341A41VgCcgTc11B.1.1.2070.001182
ORF1ab/nsp341A41VgCcgTc11B.1.1.2160.00089
ORF1ab/nsp341A41VgCcgTc11B.1.1.2220.000204
ORF1ab/nsp341A41VgCcgTc11B.1.1.2430.004082
ORF1ab/nsp341A41VgCcgTc11B.1.1.250.000569
ORF1ab/nsp341A41VgCcgTc11B.1.1.280.000311
ORF1ab/nsp341A41VgCcgTc11B.1.1.3110.000358
ORF1ab/nsp341A41VgCcgTc11B.1.1.330.000421
ORF1ab/nsp341A41VgCcgTc11B.1.1.3720.000689
ORF1ab/nsp341A41VgCcgTc11B.1.1.4200.001006
ORF1ab/nsp341A41VgCcgTc11B.1.1.4250.045455
ORF1ab/nsp341A41VgCcgTc11B.1.1.440.00241
ORF1ab/nsp341A41VgCcgTc11B.1.1.4850.016667
ORF1ab/nsp341A41VgCcgTc11B.1.1.630.000386
ORF1ab/nsp341A41VgCcgTc11B.1.177.100.000878
ORF1ab/nsp341A41VgCcgTc11B.1.177.70.000165
ORF1ab/nsp341A41VgCcgTc11B.1.177.80.000752
ORF1ab/nsp341A41VgCcgTc11B.1.2220.001692
ORF1ab/nsp341A41VgCcgTc11B.1.258.170.000104
ORF1ab/nsp341A41VgCcgTc11B.1.2600.003344
ORF1ab/nsp341A41VgCcgTc11B.1.2790.000514
ORF1ab/nsp341A41VgCcgTc11B.1.2980.002114
ORF1ab/nsp341A41VgCcgTc11B.1.360.000146
ORF1ab/nsp341A41VgCcgTc11B.1.36.190.009259
ORF1ab/nsp341A41VgCcgTc11B.1.36.220.001208
ORF1ab/nsp341A41VgCcgTc11B.1.36.240.006173
ORF1ab/nsp341A41VgCcgTc11B.1.36.380.001642
ORF1ab/nsp341A41VgCcgTc11B.1.3690.000285
ORF1ab/nsp341A41VgCcgTc11B.1.3750.00082
ORF1ab/nsp341A41VgCcgTc11B.1.3980.002976
ORF1ab/nsp341A41VgCcgTc11B.1.4590.004082
ORF1ab/nsp341A41VgCcgTc11B.1.4970.000315
ORF1ab/nsp341A41VgCcgTc11B.1.5170.000427
ORF1ab/nsp341A41VgCcgTc11B.1.5610.000397
ORF1ab/nsp341A41VgCcgTc11B.1.5670.003333
ORF1ab/nsp341A41VgCcgTc11B.1.5760.000907
ORF1ab/nsp341A41VgCcgTc11B.1.5970.00463
ORF1ab/nsp341A41VgCcgTc11B.6.60.000889
ORF1ab/nsp341A41VgCcgTc11C.160.00106
ORF1ab/nsp341A41VgCcgTc11D.20.000075
ORF1ab/nsp341A41VgCcgTc11N.30.005814
ORF1ab/nsp341A41VgCcgTc11P.1.120.000484
ORF1ab/nsp341A41VgCcgTc11Q.40.000455