CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF1ab/nsp3 : CodonNum = 402 & Codon = ccC

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF1ab/nsp3402P402PP1220PsynccTccC194940.4845363923-3925

Details of the mutation no within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF1ab/nsp3402P402PccTccC94194All0.000018
ORF1ab/nsp3402P402PccTccC1445B.1.1.70.000013
ORF1ab/nsp3402P402PccTccC117AY.40.000002
ORF1ab/nsp3402P402PccTccC1010P.10.000158
ORF1ab/nsp3402P402PccTccC88B.1.1.3160.007401
ORF1ab/nsp3402P402PccTccC18B.1.6210.000089
ORF1ab/nsp3402P402PccTccC77B.1.1770.000092
ORF1ab/nsp3402P402PccTccC56B.1.617.20.000019
ORF1ab/nsp3402P402PccTccC35AY.440.000018
ORF1ab/nsp3402P402PccTccC44AY.250.000024
ORF1ab/nsp3402P402PccTccC44B.10.000037
ORF1ab/nsp3402P402PccTccC44B.1.1600.000125
ORF1ab/nsp3402P402PccTccC24B.1.5960.000174
ORF1ab/nsp3402P402PccTccC33AY.1030.000019
ORF1ab/nsp3402P402PccTccC33AY.1160.00086
ORF1ab/nsp3402P402PccTccC33AY.4.2.10.000447
ORF1ab/nsp3402P402PccTccC12AY.430.000004
ORF1ab/nsp3402P402PccTccC22AY.50.000041
ORF1ab/nsp3402P402PccTccC22B.1.258.170.000208
ORF1ab/nsp3402P402PccTccC110.055556
ORF1ab/nsp3402P402PccTccC11AY.1000.000046
ORF1ab/nsp3402P402PccTccC11AY.1180.000063
ORF1ab/nsp3402P402PccTccC11AY.1190.000035
ORF1ab/nsp3402P402PccTccC11AY.1200.000037
ORF1ab/nsp3402P402PccTccC11AY.230.00007
ORF1ab/nsp3402P402PccTccC11AY.390.000025
ORF1ab/nsp3402P402PccTccC11AY.4.20.000022
ORF1ab/nsp3402P402PccTccC11AY.590.00053
ORF1ab/nsp3402P402PccTccC11AY.9.20.000037
ORF1ab/nsp3402P402PccTccC11B.1.1.10.000327
ORF1ab/nsp3402P402PccTccC11B.1.1.2850.006536
ORF1ab/nsp3402P402PccTccC11B.1.1.3150.008475
ORF1ab/nsp3402P402PccTccC11B.1.20.000009
ORF1ab/nsp3402P402PccTccC11B.1.3510.00003
ORF1ab/nsp3402P402PccTccC11B.1.5260.000024
ORF1ab/nsp3402P402PccTccC11B.1.5300.007143