CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF1ab/nsp3 : CodonNum = 39 & Codon = tTc

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF1ab/nsp339C39FC857FnonsyntGctTc19180.9473682834-2836

Details of the mutation no within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF1ab/nsp339C39FtGctTc1819All0.000003
ORF1ab/nsp339C39FtGctTc340.166667
ORF1ab/nsp339C39FtGctTc22B.1.10.000036
ORF1ab/nsp339C39FtGctTc11AY.1030.000006
ORF1ab/nsp339C39FtGctTc11AY.330.000067
ORF1ab/nsp339C39FtGctTc11AY.40.000002
ORF1ab/nsp339C39FtGctTc11AY.4.2.10.000149
ORF1ab/nsp339C39FtGctTc11AY.460.000104
ORF1ab/nsp339C39FtGctTc11B0.000128
ORF1ab/nsp339C39FtGctTc11B.10.000009
ORF1ab/nsp339C39FtGctTc11B.1.1.5190.00004
ORF1ab/nsp339C39FtGctTc11B.1.1.70.000001
ORF1ab/nsp339C39FtGctTc11B.1.1770.000013
ORF1ab/nsp339C39FtGctTc11B.1.3110.000275
ORF1ab/nsp339C39FtGctTc11B.1.5950.000261
ORF1ab/nsp339C39FtGctTc11B.1.617.20.000004