CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF1ab/nsp3 : CodonNum = 389

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF1ab/nsp3389P389SP1207SnonsynCctTct455945570.9995613884-3886
ORF1ab/nsp3389P389SP1207SnonsynCcTTcC455920.0004386933884-3886
ORF1ab/nsp3389P389LP1207LnonsyncCtcTt234823450.9987223884-3886
ORF1ab/nsp3389P389LP1207LnonsyncCTcTA234820.0008517893884-3886
ORF1ab/nsp3389P389LP1207LnonsyncCTcTC234810.0004258943884-3886
ORF1ab/nsp3389P389HP1207HnonsyncCtcAt130913080.9992363884-3886
ORF1ab/nsp3389P389HP1207HnonsyncCTcAC130910.0007639423884-3886
ORF1ab/nsp3389P389PP1207PsynccTccC3041930.6348683884-3886
ORF1ab/nsp3389P389PP1207PsynccTccA3041060.3486843884-3886
ORF1ab/nsp3389P389PP1207PsynccTccG30450.01644743884-3886
ORF1ab/nsp3389P389delP1207deldelCCT---25625613884-3886
ORF1ab/nsp3389P389TP1207TnonsynCctAct12612613884-3886
ORF1ab/nsp3389P389RP1207RnonsyncCtcGt222213884-3886
ORF1ab/nsp3389P389del1P1207del1delCct-ct101013884-3886
ORF1ab/nsp3389P389FP1207FnonsynCCtTTt210.53884-3886
ORF1ab/nsp3389P389FP1207FnonsynCCTTTC210.53884-3886
ORF1ab/nsp3389P389YP1207YnonsynCCtTAt210.53884-3886
ORF1ab/nsp3389P389YP1207YnonsynCCTTAC210.53884-3886
ORF1ab/nsp3389P389IP1207InonsynCCtATt1113884-3886
ORF1ab/nsp3389P389NP1207NnonsynCCtAAt1113884-3886

Details of the mutation no within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF1ab/nsp3389P389SCctTct45574559All0.000872
ORF1ab/nsp3389P389SCcTTcC24559All0
ORF1ab/nsp3389P389SCctTct27872787B.1.6280.98203
ORF1ab/nsp3389P389LcCtcTt23452348All0.000449
ORF1ab/nsp3389P389LcCTcTA22348All0
ORF1ab/nsp3389P389LcCTcTC12348All0
ORF1ab/nsp3389P389HcCtcAt13081309All0.00025
ORF1ab/nsp3389P389HcCTcAC11309All0
ORF1ab/nsp3389P389HcCtcAt767767B.1.617.20.002888
ORF1ab/nsp3389P389SCctTct346346AY.40.000539
ORF1ab/nsp3389P389LcCtcTt335335B.1.1.70.0003
ORF1ab/nsp3389P389PccTccC193304All0.000037
ORF1ab/nsp3389P389PccTccA106304All0.00002
ORF1ab/nsp3389P389PccTccG5304All0.000001
ORF1ab/nsp3389P389LcCtcTt297297B.1.4290.006988
ORF1ab/nsp3389P389delCCT---256256All0.000049
ORF1ab/nsp3389P389SCctTct228228B.1.1.70.000204
ORF1ab/nsp3389P389SCctTct196196B.1.5230.480392
ORF1ab/nsp3389P389LcCtcTt193193B.1.6120.511936
ORF1ab/nsp3389P389HcCtcAt190190B.1.1.3110.068052
ORF1ab/nsp3389P389SCctTct190190B.1.20.001673
ORF1ab/nsp3389P389HcCtcAt171171AY.980.013508
ORF1ab/nsp3389P389LcCtcTt162162B.1.10.002939
ORF1ab/nsp3389P389TCctAct126126All0.000024
ORF1ab/nsp3389P389LcCtcTt112112AY.750.006275
ORF1ab/nsp3389P389LcCtcTt102102AY.250.000614
ORF1ab/nsp3389P389SCctTct9898B.10.000898
ORF1ab/nsp3389P389SCctTct9393B.1.617.20.00035
ORF1ab/nsp3389P389PccTccC8989AY.430.000394
ORF1ab/nsp3389P389LcCtcTt8585B.1.4270.004292
ORF1ab/nsp3389P389TCctAct8484B.1.1.70.000075
ORF1ab/nsp3389P389SCctTct7676B.1.1.2220.015504
ORF1ab/nsp3389P389PccTccA7373AY.420.002937
ORF1ab/nsp3389P389LcCtcTt6969B.1.1.2650.217666
ORF1ab/nsp3389P389LcCtcTt6868AY.40.000106
ORF1ab/nsp3389P389LcCtcTt6565AY.1030.000404
ORF1ab/nsp3389P389LcCtcTt6363B.1.617.20.000237
ORF1ab/nsp3389P389LcCtcTt6161AY.50.00126
ORF1ab/nsp3389P389LcCtcTt5858B.1.2561
ORF1ab/nsp3389P389delCCT---5454B.1.1.4421
ORF1ab/nsp3389P389LcCtcTt4343B.10.000394
ORF1ab/nsp3389P389SCctTct4141B.1.2430.002853
ORF1ab/nsp3389P389SCctTct4040AY.1030.000248
ORF1ab/nsp3389P389SCctTct3636P.10.000567
ORF1ab/nsp3389P389LcCtcTt3535B.1.351.30.030675
ORF1ab/nsp3389P389LcCtcTt3535Q.20.021472
ORF1ab/nsp3389P389SCctTct3333AY.250.000198
ORF1ab/nsp3389P389LcCtcTt3232AY.430.000142
ORF1ab/nsp3389P389LcCtcTt3131B.1.20.000273
ORF1ab/nsp3389P389HcCtcAt3030C.370.003482
ORF1ab/nsp3389P389LcCtcTt2929B.1.5260.000682
ORF1ab/nsp3389P389HcCtcAt2727AY.600.025328
ORF1ab/nsp3389P389LcCtcTt2727B.1.3510.000803
ORF1ab/nsp3389P389LcCtcTt2525AY.260.000708
ORF1ab/nsp3389P389LcCtcTt2323B.1.1600.000717
ORF1ab/nsp3389P389RcCtcGt2222All0.000004
ORF1ab/nsp3389P389LcCtcTt2222AY.440.000134
ORF1ab/nsp3389P389SCctTct2222B.1.4060.133333
ORF1ab/nsp3389P389delCCT---2020B.1.1.70.000018
ORF1ab/nsp3389P389PccTccA1920B.1.4290.000447
ORF1ab/nsp3389P389PccTccC120B.1.4290.000024
ORF1ab/nsp3389P389SCctTct1919AY.1000.000874
ORF1ab/nsp3389P389SCctTct1919AY.440.000116
ORF1ab/nsp3389P389LcCtcTt1818AY.690.00336
ORF1ab/nsp3389P389PccTccC1818B.1.2210.001279
ORF1ab/nsp3389P389SCctTct1717B.1.3240.027287
ORF1ab/nsp3389P389LcCtcTt1616B.1.360.002334
ORF1ab/nsp3389P389LcCtcTt1515AY.30.000149
ORF1ab/nsp3389P389delCCT---1515B.1.20.000132
ORF1ab/nsp3389P389LcCtcTt1414B.1.177.810.002651
ORF1ab/nsp3389P389SCctTct1313AY.980.001027
ORF1ab/nsp3389P389HcCtcAt1313B.1.1.70.000012
ORF1ab/nsp3389P389PccTccC1013B.1.1.70.000009
ORF1ab/nsp3389P389PccTccA213B.1.1.70.000002
ORF1ab/nsp3389P389PccTccG113B.1.1.70.000001
ORF1ab/nsp3389P389LcCtcTt1313B.1.2580.000865
ORF1ab/nsp3389P389LcCtcTt1313P.10.000205
ORF1ab/nsp3389P389LcCtcTt1212AY.1210.001624
ORF1ab/nsp3389P389delCCT---1212AY.40.000019
ORF1ab/nsp3389P389delCCT---1212B.10.00011
ORF1ab/nsp3389P389SCctTct1212B.1.2180.061856
ORF1ab/nsp3389P389HcCtcAt1111AY.40.000017
ORF1ab/nsp3389P389SCctTct1111B.1.10.0002
ORF1ab/nsp3389P389SCctTct1111B.1.1.5190.000437
ORF1ab/nsp3389P389PccTccC1011B.1.617.20.000038
ORF1ab/nsp3389P389PccTccA111B.1.617.20.000004
ORF1ab/nsp3389P389SCctTct1111P.1.120.005324
ORF1ab/nsp3389P389del1Cct-ct1010All0.000002
ORF1ab/nsp3389P389LcCtcTt1010AY.1000.00046
ORF1ab/nsp3389P389SCctTct1010AY.230.000697
ORF1ab/nsp3389P389SCctTct1010AY.390.000247
ORF1ab/nsp3389P389delCCT---1010B.1.1.2320.018149
ORF1ab/nsp3389P389TCctAct1010B.1.2100.021322
ORF1ab/nsp3389P389LcCtcTt1010B.1.5700.029412
ORF1ab/nsp3389P389LcCtcTt99AY.330.000601
ORF1ab/nsp3389P389HcCtcAt99B.1.20.000079
ORF1ab/nsp3389P389SCctTct99B.1.5260.000212
ORF1ab/nsp3389P389delCCT---99B.1.617.20.000034
ORF1ab/nsp3389P389LcCtcTt99P.20.00168
ORF1ab/nsp3389P389LcCtcTt88AY.1140.001849
ORF1ab/nsp3389P389SCctTct88AY.20.002849
ORF1ab/nsp3389P389PccTccC88AY.40.000012
ORF1ab/nsp3389P389SCctTct88AY.430.000035
ORF1ab/nsp3389P389HcCtcAt88B0.001022
ORF1ab/nsp3389P389HcCtcAt88B.10.000073
ORF1ab/nsp3389P389delCCT---88B.1.1600.00025
ORF1ab/nsp3389P389SCctTct88B.1.2210.000568
ORF1ab/nsp3389P389LcCtcTt77AU.20.016949
ORF1ab/nsp3389P389PccTccC77AY.270.000453
ORF1ab/nsp3389P389delCCT---77AY.440.000043
ORF1ab/nsp3389P389LcCtcTt77B.1.1.2220.001428
ORF1ab/nsp3389P389delCCT---77B.1.3900.074468
ORF1ab/nsp3389P389SCctTct77B.1.4270.000353
ORF1ab/nsp3389P389SCctTct77B.1.6210.00062
ORF1ab/nsp3389P389SCctTct56AY.1190.000177
ORF1ab/nsp3389P389SCcTTcC16AY.1190.000035
ORF1ab/nsp3389P389LcCtcTt66AY.1200.000223
ORF1ab/nsp3389P389SCctTct66AY.1200.000223
ORF1ab/nsp3389P389HcCtcAt66AY.250.000036
ORF1ab/nsp3389P389SCctTct66AY.46.60.000433
ORF1ab/nsp3389P389LcCtcTt66AZ.20.004926
ORF1ab/nsp3389P389TCctAct66B.10.000055
ORF1ab/nsp3389P389SCctTct66B.1.177.70.000989
ORF1ab/nsp3389P389HcCtcAt66B.1.2580.000399
ORF1ab/nsp3389P389SCctTct66B.1.36.10.006842
ORF1ab/nsp3389P389SCctTct66B.1.438.10.000644
ORF1ab/nsp3389P389PccTccC66B.1.4410.057692
ORF1ab/nsp3389P389LcCtcTt66B.1.5960.000523
ORF1ab/nsp3389P389SCctTct66P.1.20.006936
ORF1ab/nsp3389P389SCctTct55AY.1020.000133
ORF1ab/nsp3389P389LcCtcTt55AY.1190.000177
ORF1ab/nsp3389P389SCctTct55AY.420.000201
ORF1ab/nsp3389P389SCctTct55AY.46.40.000823
ORF1ab/nsp3389P389SCctTct55AY.470.000156
ORF1ab/nsp3389P389LcCtcTt55AY.60.000206
ORF1ab/nsp3389P389PccTccC55AY.920.001436
ORF1ab/nsp3389P389LcCtcTt55B.1.1.10.001633
ORF1ab/nsp3389P389RcCtcGt55B.1.1.70.000004
ORF1ab/nsp3389P389LcCtcTt55B.1.1770.000066
ORF1ab/nsp3389P389PccTccC45B.1.20.000035
ORF1ab/nsp3389P389PccTccA15B.1.20.000009
ORF1ab/nsp3389P389RcCtcGt55B.1.4290.000118
ORF1ab/nsp3389P389SCctTct55B.1.4290.000118
ORF1ab/nsp3389P389RcCtcGt55B.1.5250.000566
ORF1ab/nsp3389P389delCCT---55B.1.5960.000436
ORF1ab/nsp3389P389HcCtcAt55B.1.6200.00473
ORF1ab/nsp3389P389LcCtcTt55B.1.6370.000365
ORF1ab/nsp3389P389LcCtcTt44AY.1020.000106
ORF1ab/nsp3389P389LcCtcTt44AY.1130.00057
ORF1ab/nsp3389P389SCctTct44AY.1130.00057
ORF1ab/nsp3389P389delCCT---44AY.1190.000141
ORF1ab/nsp3389P389SCctTct44AY.16.10.00188
ORF1ab/nsp3389P389LcCtcTt44AY.350.000932
ORF1ab/nsp3389P389SCctTct44AY.410.001176
ORF1ab/nsp3389P389LcCtcTt34AY.46.60.000217
ORF1ab/nsp3389P389LcCTcTA14AY.46.60.000072
ORF1ab/nsp3389P389LcCtcTt44AY.9.20.000147
ORF1ab/nsp3389P389PccTccC24B.10.000018
ORF1ab/nsp3389P389PccTccA24B.10.000018
ORF1ab/nsp3389P389HcCtcAt44B.1.10.000073
ORF1ab/nsp3389P389delCCT---44B.1.10.000073
ORF1ab/nsp3389P389LcCtcTt44B.1.1.330.001684
ORF1ab/nsp3389P389SCctTct44B.1.1770.000053
ORF1ab/nsp3389P389delCCT---44B.1.1770.000053
ORF1ab/nsp3389P389HcCtcAt44B.1.1770.000053
ORF1ab/nsp3389P389SCctTct44B.1.177.860.000734
ORF1ab/nsp3389P389LcCtcTt44B.1.177.90.005326
ORF1ab/nsp3389P389LcCtcTt44B.1.466.20.001565
ORF1ab/nsp3389P389HcCtcAt44B.1.5250.000453
ORF1ab/nsp3389P389LcCtcTt44B.1.5440.024096
ORF1ab/nsp3389P389SCctTct44B.1.6270.008081
ORF1ab/nsp3389P389delCCT---33A.10.000846
ORF1ab/nsp3389P389SCctTct33AY.1160.00086
ORF1ab/nsp3389P389delCCT---33AY.160.001139
ORF1ab/nsp3389P389LcCtcTt33AY.230.000209
ORF1ab/nsp3389P389delCCT---33AY.230.000209
ORF1ab/nsp3389P389PccTccA23AY.230.000139
ORF1ab/nsp3389P389PccTccC13AY.230.00007
ORF1ab/nsp3389P389delCCT---33AY.260.000085
ORF1ab/nsp3389P389LcCtcTt33AY.270.000194
ORF1ab/nsp3389P389LcCtcTt33AY.290.000047
ORF1ab/nsp3389P389delCCT---33AY.30.00003
ORF1ab/nsp3389P389SCctTct33AY.330.0002
ORF1ab/nsp3389P389LcCtcTt33AY.390.000074
ORF1ab/nsp3389P389TCctAct33AY.430.000013
ORF1ab/nsp3389P389PccTccC23AY.46.60.000144
ORF1ab/nsp3389P389PccTccA13AY.46.60.000072
ORF1ab/nsp3389P389HcCtcAt33AY.50.000062
ORF1ab/nsp3389P389SCctTct33AY.60.000123
ORF1ab/nsp3389P389LcCtcTt33B.1.1.2030.050847
ORF1ab/nsp3389P389PccTccC33B.1.1770.00004
ORF1ab/nsp3389P389delCCT---33B.1.2210.000213
ORF1ab/nsp3389P389HcCtcAt33B.1.3510.000089
ORF1ab/nsp3389P389LcCtcTt33B.1.36.350.007812
ORF1ab/nsp3389P389LcCtcTt33B.1.4700.004213
ORF1ab/nsp3389P389TCctAct33B.1.617.20.000011
ORF1ab/nsp3389P389SCctTct33C.370.000348
ORF1ab/nsp3389P389HcCtcAt33D.20.000225
ORF1ab/nsp3389P389LcCtcTt33D.20.000225
ORF1ab/nsp3389P389SCctTct33P.1.10.000953
ORF1ab/nsp3389P389SCctTct33P.20.00056
ORF1ab/nsp3389P389delCCT---33R.10.00027
ORF1ab/nsp3389P389SCctTct33R.10.00027
ORF1ab/nsp3389P389del1Cct-ct220.111111
ORF1ab/nsp3389P389SCcTTcC120.055556
ORF1ab/nsp3389P389HcCTcAC120.055556
ORF1ab/nsp3389P389LcCTcTC120.055556
ORF1ab/nsp3389P389YCCtTAt120.055556
ORF1ab/nsp3389P389FCCTTTC120.055556
ORF1ab/nsp3389P389FCCtTTt120.055556
ORF1ab/nsp3389P389YCCTTAC120.055556
ORF1ab/nsp3389P389HcCtcAt120.055556
ORF1ab/nsp3389P389LcCtcTt120.055556
ORF1ab/nsp3389P389SCctTct120.055556
ORF1ab/nsp3389P389LcCtcTt22A.2.50.000998
ORF1ab/nsp3389P389YCCtTAt12All0
ORF1ab/nsp3389P389FCCTTTC12All0
ORF1ab/nsp3389P389FCCtTTt12All0
ORF1ab/nsp3389P389YCCTTAC12All0
ORF1ab/nsp3389P389PccTccC22AY.1000.000092
ORF1ab/nsp3389P389delCCT---22AY.1000.000092
ORF1ab/nsp3389P389SCctTct22AY.1170.000169
ORF1ab/nsp3389P389LcCtcTt22AY.1180.000125
ORF1ab/nsp3389P389HcCtcAt22AY.1210.000271
ORF1ab/nsp3389P389PccTccC22AY.200.000078
ORF1ab/nsp3389P389LcCtcTt22AY.240.000862
ORF1ab/nsp3389P389SCctTct22AY.290.000032
ORF1ab/nsp3389P389SCctTct22AY.300.000791
ORF1ab/nsp3389P389PccTccC22AY.340.000194
ORF1ab/nsp3389P389SCctTct22AY.360.000296
ORF1ab/nsp3389P389TCctAct22AY.390.000049
ORF1ab/nsp3389P389delCCT---22AY.390.000049
ORF1ab/nsp3389P389SCctTct22AY.4.20.000043
ORF1ab/nsp3389P389LcCtcTt22AY.4.20.000043
ORF1ab/nsp3389P389LcCtcTt22AY.420.00008
ORF1ab/nsp3389P389delCCT---22AY.430.000009
ORF1ab/nsp3389P389HcCtcAt22AY.440.000012
ORF1ab/nsp3389P389RcCtcGt22AY.440.000012
ORF1ab/nsp3389P389delCCT---22AY.470.000062
ORF1ab/nsp3389P389LcCtcTt22AY.470.000062
ORF1ab/nsp3389P389LcCtcTt22AY.540.000191
ORF1ab/nsp3389P389LcCtcTt22AY.670.000929
ORF1ab/nsp3389P389SCctTct22AY.700.000417
ORF1ab/nsp3389P389HcCtcAt22AY.730.001331
ORF1ab/nsp3389P389LcCtcTt22AY.740.000231
ORF1ab/nsp3389P389PccTccC22AY.75.10.000361
ORF1ab/nsp3389P389HcCtcAt22AY.990.002099
ORF1ab/nsp3389P389RcCtcGt22B.1.1.1530.002191
ORF1ab/nsp3389P389LcCtcTt22B.1.1.1630.015267
ORF1ab/nsp3389P389LcCtcTt22B.1.1.2370.010811
ORF1ab/nsp3389P389delCCT---22B.1.1.2690.002706
ORF1ab/nsp3389P389SCctTct22B.1.1.280.000622
ORF1ab/nsp3389P389LcCtcTt22B.1.1.280.000622
ORF1ab/nsp3389P389LcCtcTt22B.1.1.370.000386
ORF1ab/nsp3389P389LcCtcTt22B.1.1.3970.004505
ORF1ab/nsp3389P389LcCtcTt22B.1.1.5190.000079
ORF1ab/nsp3389P389SCctTct22B.1.177.160.001329
ORF1ab/nsp3389P389LcCtcTt22B.1.2140.007326
ORF1ab/nsp3389P389LcCtcTt22B.1.3110.000549
ORF1ab/nsp3389P389PccTccG22B.1.3510.000059
ORF1ab/nsp3389P389LcCtcTt22B.1.351.20.000605
ORF1ab/nsp3389P389HcCtcAt22B.1.36.290.001035
ORF1ab/nsp3389P389SCctTct22B.1.36.290.001035
ORF1ab/nsp3389P389PccTccA22B.1.4270.000101
ORF1ab/nsp3389P389delCCT---22B.1.466.20.000782
ORF1ab/nsp3389P389LcCtcTt22B.1.5250.000226
ORF1ab/nsp3389P389delCCT---22B.1.5250.000226
ORF1ab/nsp3389P389delCCT---22B.1.5260.000047
ORF1ab/nsp3389P389delCCT---22B.1.5580.009132
ORF1ab/nsp3389P389LcCtcTt22B.1.5650.001621
ORF1ab/nsp3389P389SCctTct22B.1.5960.000174
ORF1ab/nsp3389P389LcCtcTt22B.1.6090.000959
ORF1ab/nsp3389P389LcCtcTt22B.1.617.10.000258
ORF1ab/nsp3389P389del1Cct-ct22B.1.617.20.000008
ORF1ab/nsp3389P389delCCT---22B.1.6210.000177
ORF1ab/nsp3389P389SCctTct22B.1.6370.000146
ORF1ab/nsp3389P389SCctTct22C.20.032258
ORF1ab/nsp3389P389SCctTct22D.20.00015
ORF1ab/nsp3389P389delCCT---22P.10.000032
ORF1ab/nsp3389P389HcCtcAt22P.10.000032
ORF1ab/nsp3389P389delCCT---22P.1.120.000968
ORF1ab/nsp3389P389LcCtcTt22P.1.150.000465
ORF1ab/nsp3389P389SCctTct22W.30.010526
ORF1ab/nsp3389P389SCctTct22Z.10.00578
ORF1ab/nsp3389P389PccTccC110.055556
ORF1ab/nsp3389P389TCctAct11A0.000387
ORF1ab/nsp3389P389LcCtcTt11A.20.000662
ORF1ab/nsp3389P389SCctTct11A.2.40.003367
ORF1ab/nsp3389P389LcCtcTt11A.2.5.20.001572
ORF1ab/nsp3389P389LcCtcTt11A.210.00277
ORF1ab/nsp3389P389HcCtcAt11AD.20.000219
ORF1ab/nsp3389P389ICCtATt11All0
ORF1ab/nsp3389P389NCCtAAt11All0
ORF1ab/nsp3389P389LcCtcTt11AY.100.00053
ORF1ab/nsp3389P389HcCtcAt11AY.1000.000046
ORF1ab/nsp3389P389NCCtAAt11AY.1020.000027
ORF1ab/nsp3389P389PccTccC11AY.1020.000027
ORF1ab/nsp3389P389PccTccC11AY.1030.000006
ORF1ab/nsp3389P389HcCtcAt11AY.1030.000006
ORF1ab/nsp3389P389delCCT---11AY.1030.000006
ORF1ab/nsp3389P389LcCtcTt11AY.1040.001984
ORF1ab/nsp3389P389delCCT---11AY.1070.000466
ORF1ab/nsp3389P389SCctTct11AY.1110.000183
ORF1ab/nsp3389P389HcCtcAt11AY.1110.000183
ORF1ab/nsp3389P389SCctTct11AY.1140.000231
ORF1ab/nsp3389P389HcCtcAt11AY.1170.000085
ORF1ab/nsp3389P389delCCT---11AY.1180.000063
ORF1ab/nsp3389P389SCctTct11AY.1180.000063
ORF1ab/nsp3389P389PccTccC11AY.1180.000063
ORF1ab/nsp3389P389PccTccC11AY.1190.000035
ORF1ab/nsp3389P389delCCT---11AY.1200.000037
ORF1ab/nsp3389P389delCCT---11AY.130.000161
ORF1ab/nsp3389P389LcCtcTt11AY.16.10.00047
ORF1ab/nsp3389P389delCCT---11AY.190.00114
ORF1ab/nsp3389P389SCctTct11AY.200.000039
ORF1ab/nsp3389P389LcCtcTt11AY.200.000039
ORF1ab/nsp3389P389delCCT---11AY.200.000039
ORF1ab/nsp3389P389LcCtcTt11AY.210.001898
ORF1ab/nsp3389P389del1Cct-ct11AY.230.00007
ORF1ab/nsp3389P389delCCT---11AY.250.000006
ORF1ab/nsp3389P389SCctTct11AY.260.000028
ORF1ab/nsp3389P389TCctAct11AY.260.000028
ORF1ab/nsp3389P389HcCtcAt11AY.270.000065
ORF1ab/nsp3389P389delCCT---11AY.290.000016
ORF1ab/nsp3389P389HcCtcAt11AY.29.10.000221
ORF1ab/nsp3389P389PccTccC11AY.30.00001
ORF1ab/nsp3389P389SCctTct11AY.30.00001
ORF1ab/nsp3389P389delCCT---11AY.3.10.000085
ORF1ab/nsp3389P389SCctTct11AY.3.10.000085
ORF1ab/nsp3389P389LcCtcTt11AY.300.000396
ORF1ab/nsp3389P389TCctAct11AY.330.000067
ORF1ab/nsp3389P389SCctTct11AY.340.000097
ORF1ab/nsp3389P389LcCtcTt11AY.370.000316
ORF1ab/nsp3389P389PccTccG11AY.380.000499
ORF1ab/nsp3389P389HcCtcAt11AY.390.000025
ORF1ab/nsp3389P389LcCtcTt11AY.39.10.00004
ORF1ab/nsp3389P389PccTccC11AY.39.10.00004
ORF1ab/nsp3389P389TCctAct11AY.4.20.000022
ORF1ab/nsp3389P389SCctTct11AY.4.2.10.000149
ORF1ab/nsp3389P389LcCtcTt11AY.4.40.000409
ORF1ab/nsp3389P389SCctTct11AY.4.50.000107
ORF1ab/nsp3389P389LcCtcTt11AY.400.000964
ORF1ab/nsp3389P389TCctAct11AY.420.00004
ORF1ab/nsp3389P389RcCtcGt11AY.430.000004
ORF1ab/nsp3389P389HcCtcAt11AY.430.000004
ORF1ab/nsp3389P389TCctAct11AY.440.000006
ORF1ab/nsp3389P389PccTccC11AY.450.000122
ORF1ab/nsp3389P389HcCtcAt11AY.450.000122
ORF1ab/nsp3389P389delCCT---11AY.450.000122
ORF1ab/nsp3389P389HcCtcAt11AY.460.000104
ORF1ab/nsp3389P389SCctTct11AY.460.000104
ORF1ab/nsp3389P389PccTccC11AY.46.20.000635
ORF1ab/nsp3389P389HcCtcAt11AY.470.000031
ORF1ab/nsp3389P389LcCtcTt11AY.480.000465
ORF1ab/nsp3389P389delCCT---11AY.50.000021
ORF1ab/nsp3389P389SCctTct11AY.50.000021
ORF1ab/nsp3389P389HcCtcAt11AY.5.40.000277
ORF1ab/nsp3389P389LcCtcTt11AY.500.000799
ORF1ab/nsp3389P389TCctAct11AY.520.000814
ORF1ab/nsp3389P389LcCtcTt11AY.530.000288
ORF1ab/nsp3389P389SCctTct11AY.580.000907
ORF1ab/nsp3389P389LcCtcTt11AY.590.00053
ORF1ab/nsp3389P389delCCT---11AY.60.000041
ORF1ab/nsp3389P389PccTccC11AY.60.000041
ORF1ab/nsp3389P389LcCtcTt11AY.610.000105
ORF1ab/nsp3389P389PccTccC11AY.610.000105
ORF1ab/nsp3389P389SCctTct11AY.610.000105
ORF1ab/nsp3389P389PccTccC11AY.620.000436
ORF1ab/nsp3389P389SCctTct11AY.620.000436
ORF1ab/nsp3389P389TCctAct11AY.620.000436
ORF1ab/nsp3389P389SCctTct11AY.630.000387
ORF1ab/nsp3389P389LcCtcTt11AY.650.000533
ORF1ab/nsp3389P389delCCT---11AY.690.000187
ORF1ab/nsp3389P389LcCtcTt11AY.7.10.000113
ORF1ab/nsp3389P389SCctTct11AY.7.20.000559
ORF1ab/nsp3389P389LcCtcTt11AY.730.000665
ORF1ab/nsp3389P389SCctTct11AY.750.000056
ORF1ab/nsp3389P389SCctTct11AY.770.001127
ORF1ab/nsp3389P389LcCtcTt11AY.80.000606
ORF1ab/nsp3389P389LcCtcTt11AY.810.001992
ORF1ab/nsp3389P389HcCtcAt11AY.820.001357
ORF1ab/nsp3389P389LcCtcTt11AY.840.000437
ORF1ab/nsp3389P389del1Cct-ct11AY.9.20.000037
ORF1ab/nsp3389P389SCctTct11AY.9.20.000037
ORF1ab/nsp3389P389HcCtcAt11AY.900.000684
ORF1ab/nsp3389P389LcCtcTt11AY.980.000079
ORF1ab/nsp3389P389SCctTct11AY.98.10.000048
ORF1ab/nsp3389P389LcCtcTt11AY.98.10.000048
ORF1ab/nsp3389P389del1Cct-ct11B0.000128
ORF1ab/nsp3389P389SCctTct11B0.000128
ORF1ab/nsp3389P389LcCtcTt11B0.000128
ORF1ab/nsp3389P389TCctAct11B0.000128
ORF1ab/nsp3389P389PccTccA11B.1.10.000018
ORF1ab/nsp3389P389SCctTct11B.1.1.1170.009709
ORF1ab/nsp3389P389delCCT---11B.1.1.1350.004695
ORF1ab/nsp3389P389LcCtcTt11B.1.1.1410.002012
ORF1ab/nsp3389P389LcCtcTt11B.1.1.1870.00885
ORF1ab/nsp3389P389LcCtcTt11B.1.1.1890.001513
ORF1ab/nsp3389P389delCCT---11B.1.1.1920.002309
ORF1ab/nsp3389P389HcCtcAt11B.1.1.2140.000055
ORF1ab/nsp3389P389SCctTct11B.1.1.2140.000055
ORF1ab/nsp3389P389SCctTct11B.1.1.2160.00089
ORF1ab/nsp3389P389LcCtcTt11B.1.1.2160.00089
ORF1ab/nsp3389P389delCCT---11B.1.1.2210.010101
ORF1ab/nsp3389P389LcCtcTt11B.1.1.250.000569
ORF1ab/nsp3389P389delCCT---11B.1.1.250.000569
ORF1ab/nsp3389P389LcCtcTt11B.1.1.2790.001121
ORF1ab/nsp3389P389LcCtcTt11B.1.1.2840.000107
ORF1ab/nsp3389P389LcCtcTt11B.1.1.290.010309
ORF1ab/nsp3389P389SCctTct11B.1.1.2940.001266
ORF1ab/nsp3389P389delCCT---11B.1.1.3060.000438
ORF1ab/nsp3389P389delCCT---11B.1.1.3150.008475
ORF1ab/nsp3389P389PccTccC11B.1.1.3170.000412
ORF1ab/nsp3389P389delCCT---11B.1.1.3180.000302
ORF1ab/nsp3389P389delCCT---11B.1.1.330.000421
ORF1ab/nsp3389P389del1Cct-ct11B.1.1.330.000421
ORF1ab/nsp3389P389LcCtcTt11B.1.1.3690.000446
ORF1ab/nsp3389P389HcCtcAt11B.1.1.3970.002252
ORF1ab/nsp3389P389LcCtcTt11B.1.1.4160.000905
ORF1ab/nsp3389P389delCCT---11B.1.1.4340.000349
ORF1ab/nsp3389P389TCctAct11B.1.1.4480.002033
ORF1ab/nsp3389P389LcCtcTt11B.1.1.4820.023256
ORF1ab/nsp3389P389PccTccC11B.1.1.4860.001577
ORF1ab/nsp3389P389delCCT---11B.1.1.5190.00004
ORF1ab/nsp3389P389LcCtcTt11B.1.1.5240.020833
ORF1ab/nsp3389P389del1Cct-ct11B.1.1.70.000001
ORF1ab/nsp3389P389SCctTct11B.1.1030.019231
ORF1ab/nsp3389P389LcCtcTt11B.1.110.30.000718
ORF1ab/nsp3389P389LcCtcTt11B.1.1110.001175
ORF1ab/nsp3389P389HcCtcAt11B.1.1390.000733
ORF1ab/nsp3389P389LcCtcTt11B.1.1390.000733
ORF1ab/nsp3389P389delCCT---11B.1.1400.018868
ORF1ab/nsp3389P389SCctTct11B.1.1600.000031
ORF1ab/nsp3389P389RcCtcGt11B.1.1770.000013
ORF1ab/nsp3389P389PccTccC11B.1.177.210.000076
ORF1ab/nsp3389P389delCCT---11B.1.177.40.000211
ORF1ab/nsp3389P389HcCtcAt11B.1.177.400.005155
ORF1ab/nsp3389P389SCctTct11B.1.177.560.000668
ORF1ab/nsp3389P389SCctTct11B.1.177.60.000977
ORF1ab/nsp3389P389LcCtcTt11B.1.177.600.000218
ORF1ab/nsp3389P389PccTccC11B.1.177.70.000165
ORF1ab/nsp3389P389PccTccA11B.1.177.730.000566
ORF1ab/nsp3389P389LcCtcTt11B.1.177.870.000728
ORF1ab/nsp3389P389del1Cct-ct11B.1.20.000009
ORF1ab/nsp3389P389LcCtcTt11B.1.220.001318
ORF1ab/nsp3389P389delCCT---11B.1.2230.002778
ORF1ab/nsp3389P389PccTccC11B.1.2320.000537
ORF1ab/nsp3389P389SCctTct11B.1.2320.000537
ORF1ab/nsp3389P389SCctTct11B.1.2340.000132
ORF1ab/nsp3389P389LcCtcTt11B.1.2360.002053
ORF1ab/nsp3389P389LcCtcTt11B.1.2430.00007
ORF1ab/nsp3389P389delCCT---11B.1.2430.00007
ORF1ab/nsp3389P389SCctTct11B.1.258.170.000104
ORF1ab/nsp3389P389ICCtATt11B.1.258.170.000104
ORF1ab/nsp3389P389TCctAct11B.1.3010.005917
ORF1ab/nsp3389P389LcCtcTt11B.1.3200.001245
ORF1ab/nsp3389P389TCctAct11B.1.3320.003497
ORF1ab/nsp3389P389LcCtcTt11B.1.3490.000715
ORF1ab/nsp3389P389delCCT---11B.1.3510.00003
ORF1ab/nsp3389P389TCctAct11B.1.3510.00003
ORF1ab/nsp3389P389SCctTct11B.1.3510.00003
ORF1ab/nsp3389P389delCCT---11B.1.3560.001727
ORF1ab/nsp3389P389TCctAct11B.1.360.000146
ORF1ab/nsp3389P389SCctTct11B.1.360.000146
ORF1ab/nsp3389P389delCCT---11B.1.360.000146
ORF1ab/nsp3389P389LcCtcTt11B.1.36.10.00114
ORF1ab/nsp3389P389SCctTct11B.1.36.160.001425
ORF1ab/nsp3389P389TCctAct11B.1.36.220.001208
ORF1ab/nsp3389P389HcCtcAt11B.1.36.350.002604
ORF1ab/nsp3389P389PccTccC11B.1.36.390.002217
ORF1ab/nsp3389P389SCctTct11B.1.36.80.001
ORF1ab/nsp3389P389SCctTct11B.1.3670.000792
ORF1ab/nsp3389P389LcCtcTt11B.1.3690.000285
ORF1ab/nsp3389P389LcCTcTA11B.1.3770.004566
ORF1ab/nsp3389P389HcCtcAt11B.1.3960.000706
ORF1ab/nsp3389P389SCctTct11B.1.4080.00369
ORF1ab/nsp3389P389LcCtcTt11B.1.4260.001009
ORF1ab/nsp3389P389SCctTct11B.1.4280.00102
ORF1ab/nsp3389P389delCCT---11B.1.4290.000024
ORF1ab/nsp3389P389TCctAct11B.1.4590.004082
ORF1ab/nsp3389P389LcCtcTt11B.1.4970.000315
ORF1ab/nsp3389P389SCctTct11B.1.5440.006024
ORF1ab/nsp3389P389SCctTct11B.1.5610.000397
ORF1ab/nsp3389P389LcCtcTt11B.1.5760.000907
ORF1ab/nsp3389P389SCctTct11B.1.5800.004065
ORF1ab/nsp3389P389delCCT---11B.1.5950.000261
ORF1ab/nsp3389P389PccTccC11B.1.6090.000479
ORF1ab/nsp3389P389RcCtcGt11B.1.617.20.000004
ORF1ab/nsp3389P389LcCtcTt11B.1.6210.000089
ORF1ab/nsp3389P389TCctAct11B.1.6230.000536
ORF1ab/nsp3389P389SCctTct11B.1.6330.041667
ORF1ab/nsp3389P389HcCtcAt11B.1.6360.006711
ORF1ab/nsp3389P389LcCtcTt11B.280.003279
ORF1ab/nsp3389P389PccTccG11B.3.10.001658
ORF1ab/nsp3389P389delCCT---11B.570.015152
ORF1ab/nsp3389P389TCctAct11B.6.60.000889
ORF1ab/nsp3389P389LcCtcTt11C.370.000116
ORF1ab/nsp3389P389delCCT---11C.370.000116
ORF1ab/nsp3389P389PccTccA11D.20.000075
ORF1ab/nsp3389P389delCCT---11D.20.000075
ORF1ab/nsp3389P389LcCtcTt11N.40.004255
ORF1ab/nsp3389P389delCCT---11N.60.007092
ORF1ab/nsp3389P389delCCT---11P.1.140.000048
ORF1ab/nsp3389P389HcCtcAt11P.1.140.000048
ORF1ab/nsp3389P389SCctTct11P.1.140.000048
ORF1ab/nsp3389P389LcCtcTt11P.1.70.000319
ORF1ab/nsp3389P389LcCtcTt11P.60.003145
ORF1ab/nsp3389P389SCctTct11Q.10.000126
ORF1ab/nsp3389P389delCCT---11Q.20.000613
ORF1ab/nsp3389P389SCctTct11Q.40.000455
ORF1ab/nsp3389P389LcCtcTt11Q.80.000165
ORF1ab/nsp3389P389LcCtcTt11R.10.00009
ORF1ab/nsp3389P389SCctTct11U.30.003861
ORF1ab/nsp3389P389delCCT---11W.40.001351
ORF1ab/nsp3389P389LcCtcTt11Z.10.00289