CoV-GLUE | Mutations | Mutation
Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):
ORF | CodonNum | Mut | ORF1abMut | MutType | RefCodon | MutCodon | AACount | CodonCount | CodonProp | Genome Position |
ORF1ab/nsp3 | 385 | I385I | I1203I | syn | atC | atT | 8812 | 8566 | 0.972084 | 3872-3874 |
ORF1ab/nsp3 | 385 | I385I | I1203I | syn | atC | atA | 8812 | 246 | 0.0279165 | 3872-3874 |
ORF1ab/nsp3 | 385 | I385V | I1203V | nonsyn | Atc | Gtc | 1161 | 1149 | 0.989664 | 3872-3874 |
ORF1ab/nsp3 | 385 | I385V | I1203V | nonsyn | AtC | GtT | 1161 | 12 | 0.0103359 | 3872-3874 |
ORF1ab/nsp3 | 385 | I385T | I1203T | nonsyn | aTc | aCc | 967 | 960 | 0.992761 | 3872-3874 |
ORF1ab/nsp3 | 385 | I385T | I1203T | nonsyn | aTC | aCA | 967 | 4 | 0.0041365 | 3872-3874 |
ORF1ab/nsp3 | 385 | I385T | I1203T | nonsyn | aTC | aCT | 967 | 3 | 0.00310238 | 3872-3874 |
ORF1ab/nsp3 | 385 | I385L | I1203L | nonsyn | Atc | Ctc | 373 | 373 | 1 | 3872-3874 |
ORF1ab/nsp3 | 385 | I385del | I1203del | del | ATC | --- | 138 | 138 | 1 | 3872-3874 |
ORF1ab/nsp3 | 385 | I385S | I1203S | nonsyn | aTc | aGc | 73 | 72 | 0.986301 | 3872-3874 |
ORF1ab/nsp3 | 385 | I385S | I1203S | nonsyn | aTC | aGT | 73 | 1 | 0.0136986 | 3872-3874 |
ORF1ab/nsp3 | 385 | I385N | I1203N | nonsyn | aTc | aAc | 8 | 7 | 0.875 | 3872-3874 |
ORF1ab/nsp3 | 385 | I385N | I1203N | nonsyn | aTC | aAT | 8 | 1 | 0.125 | 3872-3874 |
ORF1ab/nsp3 | 385 | I385M | I1203M | nonsyn | atC | atG | 6 | 6 | 1 | 3872-3874 |
ORF1ab/nsp3 | 385 | I385F | I1203F | nonsyn | Atc | Ttc | 6 | 6 | 1 | 3872-3874 |
ORF1ab/nsp3 | 385 | I385R | I1203R | nonsyn | aTC | aGA | 2 | 2 | 1 | 3872-3874 |
ORF1ab/nsp3 | 385 | I385del2 | I1203del2 | del | ATc | --c | 2 | 1 | 0.5 | 3872-3874 |
ORF1ab/nsp3 | 385 | I385del2 | I1203del2 | del | ATC | --T | 2 | 1 | 0.5 | 3872-3874 |
ORF1ab/nsp3 | 385 | I385K | I1203K | nonsyn | aTC | aAA | 1 | 1 | 1 | 3872-3874 |
ORF1ab/nsp3 | 385 | I385del1 | I1203del1 | del | atC | at- | 1 | 1 | 1 | 3872-3874 |
ORF1ab/nsp3 | 385 | I385A | I1203A | nonsyn | ATC | GCT | 1 | 1 | 1 | 3872-3874 |
Details of the mutation no within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):
ORF | CodonNum | Mut | RefCodon | MutCodon | CodonCount | AACount | Lineage | LineageCodonProp |
ORF1ab/nsp3 | 385 | I385I | atC | atT | 8566 | 8812 | All | 0.001638 |
ORF1ab/nsp3 | 385 | I385I | atC | atA | 246 | 8812 | All | 0.000047 |
ORF1ab/nsp3 | 385 | I385I | atC | atT | 1917 | 1976 | B.1.1.7 | 0.001716 |
ORF1ab/nsp3 | 385 | I385I | atC | atA | 59 | 1976 | B.1.1.7 | 0.000053 |
ORF1ab/nsp3 | 385 | I385I | atC | atT | 1376 | 1384 | AY.4 | 0.002142 |
ORF1ab/nsp3 | 385 | I385I | atC | atA | 8 | 1384 | AY.4 | 0.000012 |
ORF1ab/nsp3 | 385 | I385V | Atc | Gtc | 1149 | 1161 | All | 0.00022 |
ORF1ab/nsp3 | 385 | I385V | AtC | GtT | 12 | 1161 | All | 0.000002 |
ORF1ab/nsp3 | 385 | I385T | aTc | aCc | 960 | 967 | All | 0.000184 |
ORF1ab/nsp3 | 385 | I385T | aTC | aCA | 4 | 967 | All | 0.000001 |
ORF1ab/nsp3 | 385 | I385T | aTC | aCT | 3 | 967 | All | 0.000001 |
ORF1ab/nsp3 | 385 | I385I | atC | atT | 915 | 934 | B.1.617.2 | 0.003445 |
ORF1ab/nsp3 | 385 | I385I | atC | atA | 19 | 934 | B.1.617.2 | 0.000072 |
ORF1ab/nsp3 | 385 | I385L | Atc | Ctc | 373 | 373 | All | 0.000071 |
ORF1ab/nsp3 | 385 | I385I | atC | atT | 357 | 372 | AY.43 | 0.001582 |
ORF1ab/nsp3 | 385 | I385I | atC | atA | 15 | 372 | AY.43 | 0.000066 |
ORF1ab/nsp3 | 385 | I385V | Atc | Gtc | 344 | 345 | B.1.617.2 | 0.001295 |
ORF1ab/nsp3 | 385 | I385V | AtC | GtT | 1 | 345 | B.1.617.2 | 0.000004 |
ORF1ab/nsp3 | 385 | I385T | aTc | aCc | 329 | 329 | B.1.1.204 | 1 |
ORF1ab/nsp3 | 385 | I385V | Atc | Gtc | 309 | 315 | B.1.1.7 | 0.000277 |
ORF1ab/nsp3 | 385 | I385V | AtC | GtT | 6 | 315 | B.1.1.7 | 0.000005 |
ORF1ab/nsp3 | 385 | I385I | atC | atT | 288 | 288 | AY.42 | 0.011586 |
ORF1ab/nsp3 | 385 | I385I | atC | atT | 271 | 271 | B.1.427 | 0.013685 |
ORF1ab/nsp3 | 385 | I385I | atC | atT | 208 | 208 | B.1.621 | 0.018412 |
ORF1ab/nsp3 | 385 | I385I | atC | atT | 204 | 207 | AY.44 | 0.001242 |
ORF1ab/nsp3 | 385 | I385I | atC | atA | 3 | 207 | AY.44 | 0.000018 |
ORF1ab/nsp3 | 385 | I385I | atC | atT | 191 | 197 | B.1.2 | 0.001682 |
ORF1ab/nsp3 | 385 | I385I | atC | atA | 6 | 197 | B.1.2 | 0.000053 |
ORF1ab/nsp3 | 385 | I385L | Atc | Ctc | 178 | 178 | B.1.1.7 | 0.000159 |
ORF1ab/nsp3 | 385 | I385I | atC | atT | 132 | 176 | B.1 | 0.001209 |
ORF1ab/nsp3 | 385 | I385I | atC | atA | 44 | 176 | B.1 | 0.000403 |
ORF1ab/nsp3 | 385 | I385I | atC | atT | 176 | 176 | B.1.1.222 | 0.035904 |
ORF1ab/nsp3 | 385 | I385T | aTc | aCc | 174 | 174 | B.1.1.7 | 0.000156 |
ORF1ab/nsp3 | 385 | I385I | atC | atT | 152 | 152 | AY.98 | 0.012007 |
ORF1ab/nsp3 | 385 | I385del | ATC | --- | 138 | 138 | All | 0.000026 |
ORF1ab/nsp3 | 385 | I385I | atC | atT | 137 | 137 | B.1.243 | 0.009533 |
ORF1ab/nsp3 | 385 | I385I | atC | atT | 132 | 133 | B.1.429 | 0.003106 |
ORF1ab/nsp3 | 385 | I385I | atC | atA | 1 | 133 | B.1.429 | 0.000024 |
ORF1ab/nsp3 | 385 | I385I | atC | atT | 121 | 124 | AY.103 | 0.000751 |
ORF1ab/nsp3 | 385 | I385I | atC | atA | 3 | 124 | AY.103 | 0.000019 |
ORF1ab/nsp3 | 385 | I385V | Atc | Gtc | 108 | 108 | AY.43 | 0.000478 |
ORF1ab/nsp3 | 385 | I385V | Atc | Gtc | 107 | 107 | AY.2 | 0.038105 |
ORF1ab/nsp3 | 385 | I385I | atC | atT | 102 | 102 | B.1.177 | 0.001343 |
ORF1ab/nsp3 | 385 | I385I | atC | atT | 87 | 87 | B.1.147 | 0.06576 |
ORF1ab/nsp3 | 385 | I385T | aTc | aCc | 86 | 86 | AY.4 | 0.000134 |
ORF1ab/nsp3 | 385 | I385I | atC | atT | 82 | 84 | AY.33 | 0.005476 |
ORF1ab/nsp3 | 385 | I385I | atC | atA | 2 | 84 | AY.33 | 0.000134 |
ORF1ab/nsp3 | 385 | I385I | atC | atT | 74 | 82 | P.1 | 0.001166 |
ORF1ab/nsp3 | 385 | I385I | atC | atA | 8 | 82 | P.1 | 0.000126 |
ORF1ab/nsp3 | 385 | I385I | atC | atT | 74 | 78 | B.1.1 | 0.001342 |
ORF1ab/nsp3 | 385 | I385I | atC | atA | 4 | 78 | B.1.1 | 0.000073 |
ORF1ab/nsp3 | 385 | I385S | aTc | aGc | 72 | 73 | All | 0.000014 |
ORF1ab/nsp3 | 385 | I385S | aTC | aGT | 1 | 73 | All | 0 |
ORF1ab/nsp3 | 385 | I385I | atC | atT | 73 | 73 | B.1.1.519 | 0.002899 |
ORF1ab/nsp3 | 385 | I385I | atC | atT | 63 | 71 | AY.3 | 0.000627 |
ORF1ab/nsp3 | 385 | I385I | atC | atA | 8 | 71 | AY.3 | 0.00008 |
ORF1ab/nsp3 | 385 | I385I | atC | atT | 66 | 69 | AY.25 | 0.000397 |
ORF1ab/nsp3 | 385 | I385I | atC | atA | 3 | 69 | AY.25 | 0.000018 |
ORF1ab/nsp3 | 385 | I385T | aTc | aCc | 67 | 67 | B.1.617.2 | 0.000252 |
ORF1ab/nsp3 | 385 | I385I | atC | atT | 53 | 53 | AY.4.2.1 | 0.007896 |
ORF1ab/nsp3 | 385 | I385I | atC | atT | 52 | 52 | AY.5 | 0.001074 |
ORF1ab/nsp3 | 385 | I385T | aTc | aCc | 49 | 49 | AY.43 | 0.000217 |
ORF1ab/nsp3 | 385 | I385I | atC | atT | 46 | 47 | AY.102 | 0.00122 |
ORF1ab/nsp3 | 385 | I385I | atC | atA | 1 | 47 | AY.102 | 0.000027 |
ORF1ab/nsp3 | 385 | I385I | atC | atT | 46 | 47 | AY.39 | 0.001137 |
ORF1ab/nsp3 | 385 | I385I | atC | atA | 1 | 47 | AY.39 | 0.000025 |
ORF1ab/nsp3 | 385 | I385I | atC | atT | 46 | 46 | B.1.1.397 | 0.103604 |
ORF1ab/nsp3 | 385 | I385L | Atc | Ctc | 44 | 44 | AY.108 | 0.048512 |
ORF1ab/nsp3 | 385 | I385V | Atc | Gtc | 44 | 44 | B.1.2 | 0.000387 |
ORF1ab/nsp3 | 385 | I385L | Atc | Ctc | 43 | 43 | AY.102 | 0.00114 |
ORF1ab/nsp3 | 385 | I385L | Atc | Ctc | 41 | 41 | B.1.617.2 | 0.000154 |
ORF1ab/nsp3 | 385 | I385I | atC | atT | 39 | 39 | B.1.517 | 0.016652 |
ORF1ab/nsp3 | 385 | I385I | atC | atT | 36 | 39 | C.37 | 0.004178 |
ORF1ab/nsp3 | 385 | I385I | atC | atA | 3 | 39 | C.37 | 0.000348 |
ORF1ab/nsp3 | 385 | I385I | atC | atT | 38 | 38 | B.1.160 | 0.001185 |
ORF1ab/nsp3 | 385 | I385V | Atc | Gtc | 31 | 36 | B.1.1.519 | 0.001231 |
ORF1ab/nsp3 | 385 | I385V | AtC | GtT | 5 | 36 | B.1.1.519 | 0.000199 |
ORF1ab/nsp3 | 385 | I385T | aTc | aCc | 34 | 34 | B.1.1.372 | 0.023416 |
ORF1ab/nsp3 | 385 | I385I | atC | atT | 33 | 33 | AY.118 | 0.002067 |
ORF1ab/nsp3 | 385 | I385I | atC | atT | 33 | 33 | AY.20 | 0.001283 |
ORF1ab/nsp3 | 385 | I385T | aTc | aCc | 30 | 30 | AY.46 | 0.003122 |
ORF1ab/nsp3 | 385 | I385I | atC | atT | 28 | 28 | AY.116.1 | 0.00872 |
ORF1ab/nsp3 | 385 | I385I | atC | atT | 26 | 26 | AY.87 | 0.021649 |
ORF1ab/nsp3 | 385 | I385I | atC | atT | 25 | 25 | B.1.221 | 0.001776 |
ORF1ab/nsp3 | 385 | I385I | atC | atT | 24 | 24 | AY.100 | 0.001104 |
ORF1ab/nsp3 | 385 | I385I | atC | atT | 23 | 24 | AY.29 | 0.000363 |
ORF1ab/nsp3 | 385 | I385I | atC | atA | 1 | 24 | AY.29 | 0.000016 |
ORF1ab/nsp3 | 385 | I385I | atC | atT | 24 | 24 | AY.4.2 | 0.000521 |
ORF1ab/nsp3 | 385 | I385V | Atc | Gtc | 23 | 23 | AY.119 | 0.000812 |
ORF1ab/nsp3 | 385 | I385T | aTc | aCc | 22 | 22 | B.1.526 | 0.000517 |
ORF1ab/nsp3 | 385 | I385I | atC | atT | 21 | 21 | AY.32 | 0.011182 |
ORF1ab/nsp3 | 385 | I385T | aTc | aCc | 20 | 20 | B.1 | 0.000183 |
ORF1ab/nsp3 | 385 | I385I | atC | atT | 20 | 20 | B.1.1.186 | 0.068729 |
ORF1ab/nsp3 | 385 | I385I | atC | atT | 20 | 20 | B.1.177.32 | 0.026991 |
ORF1ab/nsp3 | 385 | I385I | atC | atT | 20 | 20 | B.1.351 | 0.000595 |
ORF1ab/nsp3 | 385 | I385V | Atc | Gtc | 19 | 19 | AY.4 | 0.00003 |
ORF1ab/nsp3 | 385 | I385I | atC | atT | 19 | 19 | AY.9.2 | 0.000698 |
ORF1ab/nsp3 | 385 | I385del | ATC | --- | 19 | 19 | B.1.1.7 | 0.000017 |
ORF1ab/nsp3 | 385 | I385I | atC | atT | 17 | 18 | AY.119 | 0.0006 |
ORF1ab/nsp3 | 385 | I385I | atC | atA | 1 | 18 | AY.119 | 0.000035 |
ORF1ab/nsp3 | 385 | I385V | Atc | Gtc | 18 | 18 | AY.44 | 0.00011 |
ORF1ab/nsp3 | 385 | I385I | atC | atA | 11 | 18 | AY.46 | 0.001145 |
ORF1ab/nsp3 | 385 | I385I | atC | atT | 7 | 18 | AY.46 | 0.000729 |
ORF1ab/nsp3 | 385 | I385I | atC | atT | 18 | 18 | R.1 | 0.00162 |
ORF1ab/nsp3 | 385 | I385I | atC | atT | 17 | 17 | AY.98.1 | 0.000823 |
ORF1ab/nsp3 | 385 | I385I | atC | atT | 17 | 17 | B.1.596 | 0.001481 |
ORF1ab/nsp3 | 385 | I385del | ATC | --- | 15 | 15 | AY.4 | 0.000023 |
ORF1ab/nsp3 | 385 | I385I | atC | atA | 8 | 15 | AY.69 | 0.001493 |
ORF1ab/nsp3 | 385 | I385I | atC | atT | 7 | 15 | AY.69 | 0.001307 |
ORF1ab/nsp3 | 385 | I385I | atC | atT | 15 | 15 | AY.75 | 0.00084 |
ORF1ab/nsp3 | 385 | I385S | aTc | aGc | 15 | 15 | B.1.1.7 | 0.000013 |
ORF1ab/nsp3 | 385 | I385I | atC | atT | 15 | 15 | B.1.526 | 0.000353 |
ORF1ab/nsp3 | 385 | I385I | atC | atT | 13 | 13 | AY.61 | 0.001362 |
ORF1ab/nsp3 | 385 | I385I | atC | atT | 13 | 13 | B.1.240 | 0.002802 |
ORF1ab/nsp3 | 385 | I385I | atC | atT | 12 | 12 | AY.120 | 0.000446 |
ORF1ab/nsp3 | 385 | I385T | aTc | aCc | 12 | 12 | AY.25 | 0.000072 |
ORF1ab/nsp3 | 385 | I385V | Atc | Gtc | 12 | 12 | B.1.1 | 0.000218 |
ORF1ab/nsp3 | 385 | I385L | Atc | Ctc | 11 | 11 | AY.103 | 0.000068 |
ORF1ab/nsp3 | 385 | I385V | Atc | Gtc | 11 | 11 | AY.11 | 0.014726 |
ORF1ab/nsp3 | 385 | I385I | atC | atT | 11 | 11 | AY.26 | 0.000311 |
ORF1ab/nsp3 | 385 | I385I | atC | atT | 11 | 11 | AY.37 | 0.003477 |
ORF1ab/nsp3 | 385 | I385I | atC | atT | 11 | 11 | AY.6 | 0.000452 |
ORF1ab/nsp3 | 385 | I385I | atC | atT | 11 | 11 | AY.9.1 | 0.000921 |
ORF1ab/nsp3 | 385 | I385I | atC | atT | 11 | 11 | B.1.236 | 0.022587 |
ORF1ab/nsp3 | 385 | I385T | aTc | aCc | 11 | 11 | B.6 | 0.010009 |
ORF1ab/nsp3 | 385 | I385I | atC | atT | 10 | 10 | AY.14 | 0.00088 |
ORF1ab/nsp3 | 385 | I385L | Atc | Ctc | 10 | 10 | AY.4 | 0.000016 |
ORF1ab/nsp3 | 385 | I385I | atC | atT | 9 | 10 | AY.9 | 0.000608 |
ORF1ab/nsp3 | 385 | I385I | atC | atA | 1 | 10 | AY.9 | 0.000068 |
ORF1ab/nsp3 | 385 | I385I | atC | atT | 10 | 10 | B.1.375 | 0.008197 |
ORF1ab/nsp3 | 385 | I385I | atC | atT | 10 | 10 | B.1.617.1 | 0.00129 |
ORF1ab/nsp3 | 385 | I385I | atC | atT | 9 | 9 | B.1.1.176 | 0.003954 |
ORF1ab/nsp3 | 385 | I385T | aTc | aCc | 9 | 9 | B.1.2 | 0.000079 |
ORF1ab/nsp3 | 385 | I385S | aTc | aGc | 9 | 9 | B.1.526 | 0.000212 |
ORF1ab/nsp3 | 385 | I385I | atC | atT | 9 | 9 | P.1.14 | 0.00043 |
ORF1ab/nsp3 | 385 | I385T | aTC | aCT | 3 | 8 | 0.166667 | |
ORF1ab/nsp3 | 385 | I385T | aTc | aCc | 3 | 8 | 0.166667 | |
ORF1ab/nsp3 | 385 | I385T | aTC | aCA | 2 | 8 | 0.111111 | |
ORF1ab/nsp3 | 385 | I385N | aTc | aAc | 7 | 8 | All | 0.000001 |
ORF1ab/nsp3 | 385 | I385N | aTC | aAT | 1 | 8 | All | 0 |
ORF1ab/nsp3 | 385 | I385I | atC | atT | 8 | 8 | AY.74 | 0.000925 |
ORF1ab/nsp3 | 385 | I385I | atC | atT | 8 | 8 | B.1.1.33 | 0.003367 |
ORF1ab/nsp3 | 385 | I385V | Atc | Gtc | 8 | 8 | B.1.177 | 0.000105 |
ORF1ab/nsp3 | 385 | I385I | atC | atT | 8 | 8 | B.1.234 | 0.001056 |
ORF1ab/nsp3 | 385 | I385I | atC | atT | 8 | 8 | B.1.258 | 0.000532 |
ORF1ab/nsp3 | 385 | I385L | Atc | Ctc | 8 | 8 | B.1.526 | 0.000188 |
ORF1ab/nsp3 | 385 | I385I | atC | atT | 8 | 8 | B.1.621.1 | 0.004047 |
ORF1ab/nsp3 | 385 | I385I | atC | atT | 7 | 8 | B.1.637 | 0.000512 |
ORF1ab/nsp3 | 385 | I385I | atC | atA | 1 | 8 | B.1.637 | 0.000073 |
ORF1ab/nsp3 | 385 | I385I | atC | atT | 7 | 8 | D.2 | 0.000525 |
ORF1ab/nsp3 | 385 | I385I | atC | atA | 1 | 8 | D.2 | 0.000075 |
ORF1ab/nsp3 | 385 | I385del | ATC | --- | 7 | 7 | AY.44 | 0.000043 |
ORF1ab/nsp3 | 385 | I385S | aTc | aGc | 7 | 7 | AY.47 | 0.000218 |
ORF1ab/nsp3 | 385 | I385del | ATC | --- | 7 | 7 | B.1 | 0.000064 |
ORF1ab/nsp3 | 385 | I385del | ATC | --- | 7 | 7 | B.1.2 | 0.000062 |
ORF1ab/nsp3 | 385 | I385S | aTc | aGc | 7 | 7 | B.1.282 | 0.104478 |
ORF1ab/nsp3 | 385 | I385I | atC | atT | 7 | 7 | B.1.369 | 0.001997 |
ORF1ab/nsp3 | 385 | I385del | ATC | --- | 7 | 7 | B.1.390 | 0.074468 |
ORF1ab/nsp3 | 385 | I385M | atC | atG | 6 | 6 | All | 0.000001 |
ORF1ab/nsp3 | 385 | I385F | Atc | Ttc | 6 | 6 | All | 0.000001 |
ORF1ab/nsp3 | 385 | I385T | aTc | aCc | 6 | 6 | AY.106 | 0.002009 |
ORF1ab/nsp3 | 385 | I385I | atC | atT | 6 | 6 | AY.117 | 0.000507 |
ORF1ab/nsp3 | 385 | I385I | atC | atT | 6 | 6 | AY.121 | 0.000812 |
ORF1ab/nsp3 | 385 | I385T | aTc | aCc | 6 | 6 | AY.39 | 0.000148 |
ORF1ab/nsp3 | 385 | I385V | Atc | Gtc | 6 | 6 | AY.39 | 0.000148 |
ORF1ab/nsp3 | 385 | I385S | aTc | aGc | 6 | 6 | AY.44 | 0.000037 |
ORF1ab/nsp3 | 385 | I385V | Atc | Gtc | 6 | 6 | AY.46 | 0.000624 |
ORF1ab/nsp3 | 385 | I385I | atC | atT | 6 | 6 | B.1.1.284 | 0.000644 |
ORF1ab/nsp3 | 385 | I385I | atC | atT | 6 | 6 | B.1.36 | 0.000875 |
ORF1ab/nsp3 | 385 | I385I | atC | atT | 6 | 6 | B.1.36.8 | 0.006 |
ORF1ab/nsp3 | 385 | I385I | atC | atT | 5 | 5 | AU.2 | 0.012107 |
ORF1ab/nsp3 | 385 | I385V | Atc | Gtc | 5 | 5 | AY.102 | 0.000133 |
ORF1ab/nsp3 | 385 | I385T | aTc | aCc | 5 | 5 | AY.103 | 0.000031 |
ORF1ab/nsp3 | 385 | I385I | atC | atT | 5 | 5 | AY.116 | 0.001434 |
ORF1ab/nsp3 | 385 | I385I | atC | atA | 3 | 5 | AY.16 | 0.001139 |
ORF1ab/nsp3 | 385 | I385I | atC | atT | 2 | 5 | AY.16 | 0.000759 |
ORF1ab/nsp3 | 385 | I385V | Atc | Gtc | 5 | 5 | AY.25 | 0.00003 |
ORF1ab/nsp3 | 385 | I385V | Atc | Gtc | 5 | 5 | AY.26 | 0.000142 |
ORF1ab/nsp3 | 385 | I385T | aTc | aCc | 5 | 5 | AY.3 | 0.00005 |
ORF1ab/nsp3 | 385 | I385L | Atc | Ctc | 5 | 5 | AY.39 | 0.000124 |
ORF1ab/nsp3 | 385 | I385L | Atc | Ctc | 5 | 5 | AY.43 | 0.000022 |
ORF1ab/nsp3 | 385 | I385V | Atc | Gtc | 5 | 5 | AY.45 | 0.000608 |
ORF1ab/nsp3 | 385 | I385I | atC | atT | 5 | 5 | AY.47 | 0.000156 |
ORF1ab/nsp3 | 385 | I385V | Atc | Gtc | 5 | 5 | AY.79 | 0.006053 |
ORF1ab/nsp3 | 385 | I385I | atC | atA | 5 | 5 | B.1.1.265 | 0.015773 |
ORF1ab/nsp3 | 385 | I385I | atC | atT | 5 | 5 | B.1.1.70 | 0.001705 |
ORF1ab/nsp3 | 385 | I385del | ATC | --- | 5 | 5 | B.1.177 | 0.000066 |
ORF1ab/nsp3 | 385 | I385I | atC | atT | 5 | 5 | B.1.497 | 0.001574 |
ORF1ab/nsp3 | 385 | I385del | ATC | --- | 5 | 5 | B.1.596 | 0.000436 |
ORF1ab/nsp3 | 385 | I385I | atC | atT | 5 | 5 | B.1.609 | 0.002397 |
ORF1ab/nsp3 | 385 | I385T | aTc | aCc | 5 | 5 | B.6.6 | 0.004444 |
ORF1ab/nsp3 | 385 | I385I | atC | atT | 5 | 5 | C.36.3 | 0.002836 |
ORF1ab/nsp3 | 385 | I385I | atC | atT | 5 | 5 | P.1.15 | 0.001162 |
ORF1ab/nsp3 | 385 | I385I | atC | atT | 5 | 5 | P.2 | 0.000933 |
ORF1ab/nsp3 | 385 | I385I | atC | atT | 4 | 4 | A.2.4 | 0.013468 |
ORF1ab/nsp3 | 385 | I385T | aTc | aCc | 4 | 4 | AY.102 | 0.000106 |
ORF1ab/nsp3 | 385 | I385V | Atc | Gtc | 4 | 4 | AY.103 | 0.000025 |
ORF1ab/nsp3 | 385 | I385del | ATC | --- | 4 | 4 | AY.25 | 0.000024 |
ORF1ab/nsp3 | 385 | I385I | atC | atT | 4 | 4 | AY.27 | 0.000259 |
ORF1ab/nsp3 | 385 | I385I | atC | atA | 4 | 4 | AY.30 | 0.001583 |
ORF1ab/nsp3 | 385 | I385T | aTc | aCc | 4 | 4 | AY.36 | 0.000593 |
ORF1ab/nsp3 | 385 | I385I | atC | atT | 4 | 4 | AY.41 | 0.001176 |
ORF1ab/nsp3 | 385 | I385S | aTc | aGc | 4 | 4 | AY.43 | 0.000018 |
ORF1ab/nsp3 | 385 | I385T | aTc | aCc | 4 | 4 | AY.44 | 0.000024 |
ORF1ab/nsp3 | 385 | I385I | atC | atT | 4 | 4 | AY.46.6 | 0.000289 |
ORF1ab/nsp3 | 385 | I385I | atC | atT | 4 | 4 | AY.62 | 0.001743 |
ORF1ab/nsp3 | 385 | I385T | aTc | aCc | 4 | 4 | AY.65 | 0.002132 |
ORF1ab/nsp3 | 385 | I385I | atC | atT | 4 | 4 | AY.85 | 0.001709 |
ORF1ab/nsp3 | 385 | I385I | atC | atT | 4 | 4 | AY.89 | 0.019608 |
ORF1ab/nsp3 | 385 | I385L | Atc | Ctc | 4 | 4 | AY.98 | 0.000316 |
ORF1ab/nsp3 | 385 | I385I | atC | atT | 4 | 4 | AY.99.2 | 0.000369 |
ORF1ab/nsp3 | 385 | I385V | Atc | Gtc | 4 | 4 | B.1 | 0.000037 |
ORF1ab/nsp3 | 385 | I385I | atC | atT | 4 | 4 | B.1.1.269 | 0.005413 |
ORF1ab/nsp3 | 385 | I385I | atC | atT | 4 | 4 | B.1.1.318 | 0.001207 |
ORF1ab/nsp3 | 385 | I385I | atC | atA | 3 | 4 | B.1.1.50 | 0.002037 |
ORF1ab/nsp3 | 385 | I385I | atC | atT | 1 | 4 | B.1.1.50 | 0.000679 |
ORF1ab/nsp3 | 385 | I385I | atC | atT | 4 | 4 | B.1.1.521 | 0.02139 |
ORF1ab/nsp3 | 385 | I385I | atC | atT | 4 | 4 | B.1.232 | 0.002149 |
ORF1ab/nsp3 | 385 | I385I | atC | atT | 4 | 4 | B.1.237 | 0.0199 |
ORF1ab/nsp3 | 385 | I385T | aTc | aCc | 4 | 4 | B.1.240 | 0.000862 |
ORF1ab/nsp3 | 385 | I385T | aTc | aCc | 4 | 4 | B.1.281 | 0.086957 |
ORF1ab/nsp3 | 385 | I385S | aTc | aGc | 4 | 4 | B.1.351 | 0.000119 |
ORF1ab/nsp3 | 385 | I385I | atC | atT | 4 | 4 | B.1.367 | 0.00317 |
ORF1ab/nsp3 | 385 | I385I | atC | atT | 4 | 4 | B.1.575.1 | 0.009756 |
ORF1ab/nsp3 | 385 | I385I | atC | atT | 4 | 4 | Q.1 | 0.000505 |
ORF1ab/nsp3 | 385 | I385I | atC | atT | 2 | 3 | 0.111111 | |
ORF1ab/nsp3 | 385 | I385I | atC | atA | 1 | 3 | 0.055556 | |
ORF1ab/nsp3 | 385 | I385I | atC | atT | 3 | 3 | AD.2 | 0.000657 |
ORF1ab/nsp3 | 385 | I385V | Atc | Gtc | 3 | 3 | AD.2 | 0.000657 |
ORF1ab/nsp3 | 385 | I385del | ATC | --- | 3 | 3 | AY.16 | 0.001139 |
ORF1ab/nsp3 | 385 | I385T | aTc | aCc | 3 | 3 | AY.20 | 0.000117 |
ORF1ab/nsp3 | 385 | I385I | atC | atT | 3 | 3 | AY.39.1 | 0.000119 |
ORF1ab/nsp3 | 385 | I385M | atC | atG | 3 | 3 | AY.44 | 0.000018 |
ORF1ab/nsp3 | 385 | I385I | atC | atT | 3 | 3 | AY.64 | 0.001786 |
ORF1ab/nsp3 | 385 | I385I | atC | atT | 3 | 3 | AY.7.2 | 0.001678 |
ORF1ab/nsp3 | 385 | I385V | Atc | Gtc | 3 | 3 | AY.75 | 0.000168 |
ORF1ab/nsp3 | 385 | I385T | aTc | aCc | 3 | 3 | AY.93 | 0.000819 |
ORF1ab/nsp3 | 385 | I385I | atC | atA | 2 | 3 | B | 0.000256 |
ORF1ab/nsp3 | 385 | I385I | atC | atT | 1 | 3 | B | 0.000128 |
ORF1ab/nsp3 | 385 | I385S | aTc | aGc | 3 | 3 | B.1 | 0.000027 |
ORF1ab/nsp3 | 385 | I385I | atC | atT | 3 | 3 | B.1.1.214 | 0.000166 |
ORF1ab/nsp3 | 385 | I385I | atC | atT | 2 | 3 | B.1.1.28 | 0.000622 |
ORF1ab/nsp3 | 385 | I385I | atC | atA | 1 | 3 | B.1.1.28 | 0.000311 |
ORF1ab/nsp3 | 385 | I385I | atC | atT | 3 | 3 | B.1.1.311 | 0.001074 |
ORF1ab/nsp3 | 385 | I385I | atC | atT | 3 | 3 | B.1.126 | 0.003827 |
ORF1ab/nsp3 | 385 | I385T | aTc | aCc | 3 | 3 | B.1.160 | 0.000094 |
ORF1ab/nsp3 | 385 | I385I | atC | atT | 3 | 3 | B.1.160.17 | 0.005102 |
ORF1ab/nsp3 | 385 | I385I | atC | atT | 3 | 3 | B.1.160.8 | 0.003866 |
ORF1ab/nsp3 | 385 | I385I | atC | atT | 3 | 3 | B.1.177.86 | 0.00055 |
ORF1ab/nsp3 | 385 | I385I | atC | atT | 2 | 3 | B.1.351.2 | 0.000605 |
ORF1ab/nsp3 | 385 | I385I | atC | atA | 1 | 3 | B.1.351.2 | 0.000303 |
ORF1ab/nsp3 | 385 | I385I | atC | atT | 3 | 3 | B.1.438.1 | 0.000322 |
ORF1ab/nsp3 | 385 | I385I | atC | atT | 2 | 3 | B.1.459 | 0.008163 |
ORF1ab/nsp3 | 385 | I385I | atC | atA | 1 | 3 | B.1.459 | 0.004082 |
ORF1ab/nsp3 | 385 | I385I | atC | atT | 3 | 3 | B.1.466.2 | 0.001174 |
ORF1ab/nsp3 | 385 | I385del | ATC | --- | 3 | 3 | B.1.525 | 0.000339 |
ORF1ab/nsp3 | 385 | I385I | atC | atT | 3 | 3 | B.1.551 | 0.003871 |
ORF1ab/nsp3 | 385 | I385I | atC | atT | 3 | 3 | B.1.582 | 0.001472 |
ORF1ab/nsp3 | 385 | I385del | ATC | --- | 3 | 3 | B.1.617.2 | 0.000011 |
ORF1ab/nsp3 | 385 | I385I | atC | atT | 3 | 3 | C.37.1 | 0.007853 |
ORF1ab/nsp3 | 385 | I385T | aTc | aCc | 3 | 3 | P.1 | 0.000047 |
ORF1ab/nsp3 | 385 | I385I | atC | atT | 3 | 3 | P.1.17 | 0.000485 |
ORF1ab/nsp3 | 385 | I385S | aTc | aGc | 1 | 2 | 0.055556 | |
ORF1ab/nsp3 | 385 | I385S | aTC | aGT | 1 | 2 | 0.055556 | |
ORF1ab/nsp3 | 385 | I385N | aTC | aAT | 1 | 2 | 0.055556 | |
ORF1ab/nsp3 | 385 | I385N | aTc | aAc | 1 | 2 | 0.055556 | |
ORF1ab/nsp3 | 385 | I385T | aTC | aCA | 1 | 2 | A.1 | 0.000282 |
ORF1ab/nsp3 | 385 | I385T | aTc | aCc | 1 | 2 | A.1 | 0.000282 |
ORF1ab/nsp3 | 385 | I385V | Atc | Gtc | 2 | 2 | A.2 | 0.001324 |
ORF1ab/nsp3 | 385 | I385I | atC | atT | 2 | 2 | A.2.5 | 0.000998 |
ORF1ab/nsp3 | 385 | I385I | atC | atT | 2 | 2 | AE.8 | 0.000978 |
ORF1ab/nsp3 | 385 | I385R | aTC | aGA | 2 | 2 | All | 0 |
ORF1ab/nsp3 | 385 | I385del2 | ATC | --T | 1 | 2 | All | 0 |
ORF1ab/nsp3 | 385 | I385del2 | ATc | --c | 1 | 2 | All | 0 |
ORF1ab/nsp3 | 385 | I385I | atC | atT | 2 | 2 | AP.1 | 0.003003 |
ORF1ab/nsp3 | 385 | I385L | Atc | Ctc | 2 | 2 | AY.105 | 0.001286 |
ORF1ab/nsp3 | 385 | I385I | atC | atT | 2 | 2 | AY.107 | 0.000932 |
ORF1ab/nsp3 | 385 | I385V | Atc | Gtc | 2 | 2 | AY.117 | 0.000169 |
ORF1ab/nsp3 | 385 | I385V | Atc | Gtc | 2 | 2 | AY.118 | 0.000125 |
ORF1ab/nsp3 | 385 | I385T | aTc | aCc | 2 | 2 | AY.119 | 0.000071 |
ORF1ab/nsp3 | 385 | I385V | Atc | Gtc | 2 | 2 | AY.19 | 0.002281 |
ORF1ab/nsp3 | 385 | I385T | aTc | aCc | 2 | 2 | AY.23 | 0.000139 |
ORF1ab/nsp3 | 385 | I385I | atC | atT | 2 | 2 | AY.24 | 0.000862 |
ORF1ab/nsp3 | 385 | I385L | Atc | Ctc | 2 | 2 | AY.25 | 0.000012 |
ORF1ab/nsp3 | 385 | I385del | ATC | --- | 2 | 2 | AY.26 | 0.000057 |
ORF1ab/nsp3 | 385 | I385del | ATC | --- | 2 | 2 | AY.3 | 0.00002 |
ORF1ab/nsp3 | 385 | I385V | Atc | Gtc | 2 | 2 | AY.3 | 0.00002 |
ORF1ab/nsp3 | 385 | I385I | atC | atT | 2 | 2 | AY.3.1 | 0.000171 |
ORF1ab/nsp3 | 385 | I385del | ATC | --- | 2 | 2 | AY.39 | 0.000049 |
ORF1ab/nsp3 | 385 | I385M | atC | atG | 2 | 2 | AY.4 | 0.000003 |
ORF1ab/nsp3 | 385 | I385S | aTc | aGc | 2 | 2 | AY.4 | 0.000003 |
ORF1ab/nsp3 | 385 | I385T | aTc | aCc | 2 | 2 | AY.4.2 | 0.000043 |
ORF1ab/nsp3 | 385 | I385I | atC | atT | 2 | 2 | AY.4.5 | 0.000215 |
ORF1ab/nsp3 | 385 | I385V | Atc | Gtc | 2 | 2 | AY.41 | 0.000588 |
ORF1ab/nsp3 | 385 | I385del | ATC | --- | 2 | 2 | AY.43 | 0.000009 |
ORF1ab/nsp3 | 385 | I385I | atC | atT | 1 | 2 | AY.45 | 0.000122 |
ORF1ab/nsp3 | 385 | I385I | atC | atA | 1 | 2 | AY.45 | 0.000122 |
ORF1ab/nsp3 | 385 | I385V | Atc | Gtc | 2 | 2 | AY.46.2 | 0.001271 |
ORF1ab/nsp3 | 385 | I385I | atC | atT | 2 | 2 | AY.46.4 | 0.000329 |
ORF1ab/nsp3 | 385 | I385I | atC | atT | 2 | 2 | AY.5.3 | 0.000675 |
ORF1ab/nsp3 | 385 | I385V | Atc | Gtc | 2 | 2 | AY.5.4 | 0.000553 |
ORF1ab/nsp3 | 385 | I385I | atC | atT | 2 | 2 | AY.5.4 | 0.000553 |
ORF1ab/nsp3 | 385 | I385I | atC | atT | 2 | 2 | AY.56 | 0.00321 |
ORF1ab/nsp3 | 385 | I385V | Atc | Gtc | 2 | 2 | AY.69 | 0.000373 |
ORF1ab/nsp3 | 385 | I385V | Atc | Gtc | 2 | 2 | AY.7 | 0.000392 |
ORF1ab/nsp3 | 385 | I385I | atC | atA | 2 | 2 | AY.7 | 0.000392 |
ORF1ab/nsp3 | 385 | I385S | aTc | aGc | 2 | 2 | AY.75 | 0.000112 |
ORF1ab/nsp3 | 385 | I385del | ATC | --- | 2 | 2 | AY.75.1 | 0.000361 |
ORF1ab/nsp3 | 385 | I385I | atC | atT | 2 | 2 | AY.95 | 0.001522 |
ORF1ab/nsp3 | 385 | I385V | Atc | Gtc | 2 | 2 | AY.96 | 0.004149 |
ORF1ab/nsp3 | 385 | I385V | Atc | Gtc | 2 | 2 | AY.98.1 | 0.000097 |
ORF1ab/nsp3 | 385 | I385I | atC | atT | 2 | 2 | AY.99 | 0.002099 |
ORF1ab/nsp3 | 385 | I385del | ATC | --- | 2 | 2 | B.1.1 | 0.000036 |
ORF1ab/nsp3 | 385 | I385L | Atc | Ctc | 2 | 2 | B.1.1 | 0.000036 |
ORF1ab/nsp3 | 385 | I385T | aTc | aCc | 2 | 2 | B.1.1 | 0.000036 |
ORF1ab/nsp3 | 385 | I385I | atC | atT | 2 | 2 | B.1.1.170 | 0.002494 |
ORF1ab/nsp3 | 385 | I385I | atC | atT | 2 | 2 | B.1.1.205 | 0.007435 |
ORF1ab/nsp3 | 385 | I385I | atC | atA | 2 | 2 | B.1.1.241 | 0.004141 |
ORF1ab/nsp3 | 385 | I385I | atC | atT | 2 | 2 | B.1.1.297 | 0.004474 |
ORF1ab/nsp3 | 385 | I385I | atC | atT | 2 | 2 | B.1.1.298 | 0.001724 |
ORF1ab/nsp3 | 385 | I385I | atC | atT | 2 | 2 | B.1.1.306 | 0.000877 |
ORF1ab/nsp3 | 385 | I385V | Atc | Gtc | 2 | 2 | B.1.1.33 | 0.000842 |
ORF1ab/nsp3 | 385 | I385I | atC | atT | 2 | 2 | B.1.1.34 | 0.026316 |
ORF1ab/nsp3 | 385 | I385I | atC | atT | 2 | 2 | B.1.1.37 | 0.000386 |
ORF1ab/nsp3 | 385 | I385I | atC | atT | 2 | 2 | B.1.1.424 | 0.090909 |
ORF1ab/nsp3 | 385 | I385F | Atc | Ttc | 2 | 2 | B.1.1.519 | 0.000079 |
ORF1ab/nsp3 | 385 | I385V | Atc | Gtc | 2 | 2 | B.1.160 | 0.000062 |
ORF1ab/nsp3 | 385 | I385I | atC | atT | 2 | 2 | B.1.160.25 | 0.022222 |
ORF1ab/nsp3 | 385 | I385L | Atc | Ctc | 2 | 2 | B.1.177 | 0.000026 |
ORF1ab/nsp3 | 385 | I385L | Atc | Ctc | 2 | 2 | B.1.177.12 | 0.000303 |
ORF1ab/nsp3 | 385 | I385I | atC | atT | 2 | 2 | B.1.177.44 | 0.001038 |
ORF1ab/nsp3 | 385 | I385I | atC | atT | 2 | 2 | B.1.177.77 | 0.001452 |
ORF1ab/nsp3 | 385 | I385I | atC | atT | 2 | 2 | B.1.22 | 0.002635 |
ORF1ab/nsp3 | 385 | I385I | atC | atT | 2 | 2 | B.1.258.10 | 0.022727 |
ORF1ab/nsp3 | 385 | I385I | atC | atA | 1 | 2 | B.1.258.17 | 0.000104 |
ORF1ab/nsp3 | 385 | I385I | atC | atT | 1 | 2 | B.1.258.17 | 0.000104 |
ORF1ab/nsp3 | 385 | I385I | atC | atT | 2 | 2 | B.1.298 | 0.004228 |
ORF1ab/nsp3 | 385 | I385I | atC | atT | 2 | 2 | B.1.311 | 0.000549 |
ORF1ab/nsp3 | 385 | I385I | atC | atT | 2 | 2 | B.1.351.3 | 0.001753 |
ORF1ab/nsp3 | 385 | I385I | atC | atT | 2 | 2 | B.1.36.29 | 0.001035 |
ORF1ab/nsp3 | 385 | I385N | aTc | aAc | 2 | 2 | B.1.36.8 | 0.002 |
ORF1ab/nsp3 | 385 | I385I | atC | atA | 2 | 2 | B.1.396 | 0.001411 |
ORF1ab/nsp3 | 385 | I385T | aTc | aCc | 2 | 2 | B.1.427 | 0.000101 |
ORF1ab/nsp3 | 385 | I385del | ATC | --- | 2 | 2 | B.1.429 | 0.000047 |
ORF1ab/nsp3 | 385 | I385L | Atc | Ctc | 2 | 2 | B.1.429 | 0.000047 |
ORF1ab/nsp3 | 385 | I385V | Atc | Gtc | 2 | 2 | B.1.429 | 0.000047 |
ORF1ab/nsp3 | 385 | I385V | Atc | Gtc | 2 | 2 | B.1.499 | 0.002101 |
ORF1ab/nsp3 | 385 | I385I | atC | atT | 2 | 2 | B.1.525 | 0.000226 |
ORF1ab/nsp3 | 385 | I385V | Atc | Gtc | 2 | 2 | B.1.526 | 0.000047 |
ORF1ab/nsp3 | 385 | I385del | ATC | --- | 2 | 2 | B.1.526 | 0.000047 |
ORF1ab/nsp3 | 385 | I385L | Atc | Ctc | 2 | 2 | B.1.547 | 0.04878 |
ORF1ab/nsp3 | 385 | I385del | ATC | --- | 2 | 2 | B.1.558 | 0.009132 |
ORF1ab/nsp3 | 385 | I385I | atC | atT | 2 | 2 | B.1.561 | 0.000794 |
ORF1ab/nsp3 | 385 | I385I | atC | atT | 2 | 2 | B.1.576 | 0.001813 |
ORF1ab/nsp3 | 385 | I385V | Atc | Gtc | 2 | 2 | B.1.577 | 0.001375 |
ORF1ab/nsp3 | 385 | I385I | atC | atT | 2 | 2 | B.1.588 | 0.00182 |
ORF1ab/nsp3 | 385 | I385I | atC | atT | 2 | 2 | B.1.595 | 0.000522 |
ORF1ab/nsp3 | 385 | I385del | ATC | --- | 2 | 2 | B.1.595 | 0.000522 |
ORF1ab/nsp3 | 385 | I385del | ATC | --- | 2 | 2 | B.1.621 | 0.000177 |
ORF1ab/nsp3 | 385 | I385T | aTc | aCc | 2 | 2 | D.2 | 0.00015 |
ORF1ab/nsp3 | 385 | I385T | aTc | aCc | 2 | 2 | N.5 | 0.003534 |
ORF1ab/nsp3 | 385 | I385V | Atc | Gtc | 2 | 2 | P.1 | 0.000032 |
ORF1ab/nsp3 | 385 | I385S | aTc | aGc | 2 | 2 | P.1 | 0.000032 |
ORF1ab/nsp3 | 385 | I385del | ATC | --- | 2 | 2 | P.1.12 | 0.000968 |
ORF1ab/nsp3 | 385 | I385T | aTc | aCc | 2 | 2 | Q.3 | 0.00029 |
ORF1ab/nsp3 | 385 | I385I | atC | atT | 2 | 2 | Q.8 | 0.00033 |
ORF1ab/nsp3 | 385 | I385R | aTC | aGA | 1 | 1 | 0.055556 | |
ORF1ab/nsp3 | 385 | I385K | aTC | aAA | 1 | 1 | 0.055556 | |
ORF1ab/nsp3 | 385 | I385F | Atc | Ttc | 1 | 1 | A.1 | 0.000282 |
ORF1ab/nsp3 | 385 | I385V | Atc | Gtc | 1 | 1 | A.23.1 | 0.000704 |
ORF1ab/nsp3 | 385 | I385I | atC | atT | 1 | 1 | A.27 | 0.001656 |
ORF1ab/nsp3 | 385 | I385I | atC | atT | 1 | 1 | A.5 | 0.001923 |
ORF1ab/nsp3 | 385 | I385I | atC | atT | 1 | 1 | AE.5 | 0.018519 |
ORF1ab/nsp3 | 385 | I385K | aTC | aAA | 1 | 1 | All | 0 |
ORF1ab/nsp3 | 385 | I385A | ATC | GCT | 1 | 1 | All | 0 |
ORF1ab/nsp3 | 385 | I385del1 | atC | at- | 1 | 1 | All | 0 |
ORF1ab/nsp3 | 385 | I385I | atC | atT | 1 | 1 | AU.1 | 0.001266 |
ORF1ab/nsp3 | 385 | I385I | atC | atT | 1 | 1 | AY.10 | 0.00053 |
ORF1ab/nsp3 | 385 | I385T | aTc | aCc | 1 | 1 | AY.100 | 0.000046 |
ORF1ab/nsp3 | 385 | I385S | aTc | aGc | 1 | 1 | AY.102 | 0.000027 |
ORF1ab/nsp3 | 385 | I385R | aTC | aGA | 1 | 1 | AY.102 | 0.000027 |
ORF1ab/nsp3 | 385 | I385I | atC | atT | 1 | 1 | AY.105 | 0.000643 |
ORF1ab/nsp3 | 385 | I385V | Atc | Gtc | 1 | 1 | AY.106 | 0.000335 |
ORF1ab/nsp3 | 385 | I385I | atC | atT | 1 | 1 | AY.106 | 0.000335 |
ORF1ab/nsp3 | 385 | I385I | atC | atT | 1 | 1 | AY.110 | 0.000113 |
ORF1ab/nsp3 | 385 | I385I | atC | atT | 1 | 1 | AY.113 | 0.000142 |
ORF1ab/nsp3 | 385 | I385I | atC | atT | 1 | 1 | AY.114 | 0.000231 |
ORF1ab/nsp3 | 385 | I385I | atC | atT | 1 | 1 | AY.115 | 0.005208 |
ORF1ab/nsp3 | 385 | I385L | Atc | Ctc | 1 | 1 | AY.117 | 0.000085 |
ORF1ab/nsp3 | 385 | I385I | atC | atT | 1 | 1 | AY.12 | 0.000316 |
ORF1ab/nsp3 | 385 | I385I | atC | atT | 1 | 1 | AY.120.2.1 | 0.000498 |
ORF1ab/nsp3 | 385 | I385I | atC | atT | 1 | 1 | AY.13 | 0.000161 |
ORF1ab/nsp3 | 385 | I385del | ATC | --- | 1 | 1 | AY.13 | 0.000161 |
ORF1ab/nsp3 | 385 | I385T | aTc | aCc | 1 | 1 | AY.16 | 0.00038 |
ORF1ab/nsp3 | 385 | I385V | Atc | Gtc | 1 | 1 | AY.16.1 | 0.00047 |
ORF1ab/nsp3 | 385 | I385del | ATC | --- | 1 | 1 | AY.19 | 0.00114 |
ORF1ab/nsp3 | 385 | I385del | ATC | --- | 1 | 1 | AY.20 | 0.000039 |
ORF1ab/nsp3 | 385 | I385I | atC | atT | 1 | 1 | AY.23 | 0.00007 |
ORF1ab/nsp3 | 385 | I385L | Atc | Ctc | 1 | 1 | AY.23 | 0.00007 |
ORF1ab/nsp3 | 385 | I385I | atC | atT | 1 | 1 | AY.23.1 | 0.000417 |
ORF1ab/nsp3 | 385 | I385S | aTc | aGc | 1 | 1 | AY.25 | 0.000006 |
ORF1ab/nsp3 | 385 | I385del2 | ATC | --T | 1 | 1 | AY.25 | 0.000006 |
ORF1ab/nsp3 | 385 | I385L | Atc | Ctc | 1 | 1 | AY.26 | 0.000028 |
ORF1ab/nsp3 | 385 | I385T | aTc | aCc | 1 | 1 | AY.26 | 0.000028 |
ORF1ab/nsp3 | 385 | I385S | aTc | aGc | 1 | 1 | AY.29 | 0.000016 |
ORF1ab/nsp3 | 385 | I385V | Atc | Gtc | 1 | 1 | AY.29 | 0.000016 |
ORF1ab/nsp3 | 385 | I385del | ATC | --- | 1 | 1 | AY.29 | 0.000016 |
ORF1ab/nsp3 | 385 | I385T | aTc | aCc | 1 | 1 | AY.29 | 0.000016 |
ORF1ab/nsp3 | 385 | I385I | atC | atT | 1 | 1 | AY.29.1 | 0.000221 |
ORF1ab/nsp3 | 385 | I385S | aTc | aGc | 1 | 1 | AY.3 | 0.00001 |
ORF1ab/nsp3 | 385 | I385del | ATC | --- | 1 | 1 | AY.3.1 | 0.000085 |
ORF1ab/nsp3 | 385 | I385T | aTc | aCc | 1 | 1 | AY.33 | 0.000067 |
ORF1ab/nsp3 | 385 | I385del | ATC | --- | 1 | 1 | AY.33 | 0.000067 |
ORF1ab/nsp3 | 385 | I385I | atC | atT | 1 | 1 | AY.34 | 0.000097 |
ORF1ab/nsp3 | 385 | I385I | atC | atT | 1 | 1 | AY.34.1 | 0.00051 |
ORF1ab/nsp3 | 385 | I385V | Atc | Gtc | 1 | 1 | AY.34.1 | 0.00051 |
ORF1ab/nsp3 | 385 | I385I | atC | atT | 1 | 1 | AY.36 | 0.000148 |
ORF1ab/nsp3 | 385 | I385del1 | atC | at- | 1 | 1 | AY.39.1 | 0.00004 |
ORF1ab/nsp3 | 385 | I385T | aTc | aCc | 1 | 1 | AY.39.1 | 0.00004 |
ORF1ab/nsp3 | 385 | I385F | Atc | Ttc | 1 | 1 | AY.4 | 0.000002 |
ORF1ab/nsp3 | 385 | I385S | aTc | aGc | 1 | 1 | AY.4.2 | 0.000022 |
ORF1ab/nsp3 | 385 | I385del | ATC | --- | 1 | 1 | AY.4.5 | 0.000107 |
ORF1ab/nsp3 | 385 | I385I | atC | atT | 1 | 1 | AY.40 | 0.000964 |
ORF1ab/nsp3 | 385 | I385V | Atc | Gtc | 1 | 1 | AY.42 | 0.00004 |
ORF1ab/nsp3 | 385 | I385L | Atc | Ctc | 1 | 1 | AY.44 | 0.000006 |
ORF1ab/nsp3 | 385 | I385T | aTc | aCc | 1 | 1 | AY.45 | 0.000122 |
ORF1ab/nsp3 | 385 | I385I | atC | atT | 1 | 1 | AY.46.2 | 0.000635 |
ORF1ab/nsp3 | 385 | I385V | Atc | Gtc | 1 | 1 | AY.46.5 | 0.000198 |
ORF1ab/nsp3 | 385 | I385del | ATC | --- | 1 | 1 | AY.47 | 0.000031 |
ORF1ab/nsp3 | 385 | I385S | aTc | aGc | 1 | 1 | AY.5 | 0.000021 |
ORF1ab/nsp3 | 385 | I385del | ATC | --- | 1 | 1 | AY.5.3 | 0.000337 |
ORF1ab/nsp3 | 385 | I385I | atC | atA | 1 | 1 | AY.52 | 0.000814 |
ORF1ab/nsp3 | 385 | I385S | aTc | aGc | 1 | 1 | AY.53 | 0.000288 |
ORF1ab/nsp3 | 385 | I385I | atC | atT | 1 | 1 | AY.53 | 0.000288 |
ORF1ab/nsp3 | 385 | I385T | aTc | aCc | 1 | 1 | AY.54 | 0.000095 |
ORF1ab/nsp3 | 385 | I385I | atC | atT | 1 | 1 | AY.54 | 0.000095 |
ORF1ab/nsp3 | 385 | I385T | aTc | aCc | 1 | 1 | AY.55 | 0.000917 |
ORF1ab/nsp3 | 385 | I385I | atC | atT | 1 | 1 | AY.55 | 0.000917 |
ORF1ab/nsp3 | 385 | I385V | Atc | Gtc | 1 | 1 | AY.57 | 0.000656 |
ORF1ab/nsp3 | 385 | I385I | atC | atT | 1 | 1 | AY.59 | 0.00053 |
ORF1ab/nsp3 | 385 | I385del | ATC | --- | 1 | 1 | AY.6 | 0.000041 |
ORF1ab/nsp3 | 385 | I385V | Atc | Gtc | 1 | 1 | AY.61 | 0.000105 |
ORF1ab/nsp3 | 385 | I385V | Atc | Gtc | 1 | 1 | AY.62 | 0.000436 |
ORF1ab/nsp3 | 385 | I385V | Atc | Gtc | 1 | 1 | AY.64 | 0.000595 |
ORF1ab/nsp3 | 385 | I385I | atC | atT | 1 | 1 | AY.7.1 | 0.000113 |
ORF1ab/nsp3 | 385 | I385I | atC | atT | 1 | 1 | AY.73 | 0.000665 |
ORF1ab/nsp3 | 385 | I385I | atC | atT | 1 | 1 | AY.84 | 0.000437 |
ORF1ab/nsp3 | 385 | I385T | aTc | aCc | 1 | 1 | AY.85 | 0.000427 |
ORF1ab/nsp3 | 385 | I385I | atC | atT | 1 | 1 | AY.88 | 0.000884 |
ORF1ab/nsp3 | 385 | I385V | Atc | Gtc | 1 | 1 | AY.9.2 | 0.000037 |
ORF1ab/nsp3 | 385 | I385L | Atc | Ctc | 1 | 1 | AY.9.2 | 0.000037 |
ORF1ab/nsp3 | 385 | I385I | atC | atT | 1 | 1 | AY.92 | 0.000287 |
ORF1ab/nsp3 | 385 | I385I | atC | atT | 1 | 1 | AY.93 | 0.000273 |
ORF1ab/nsp3 | 385 | I385V | Atc | Gtc | 1 | 1 | AY.93 | 0.000273 |
ORF1ab/nsp3 | 385 | I385del | ATC | --- | 1 | 1 | AY.94 | 0.000443 |
ORF1ab/nsp3 | 385 | I385T | aTc | aCc | 1 | 1 | AY.98 | 0.000079 |
ORF1ab/nsp3 | 385 | I385V | Atc | Gtc | 1 | 1 | AY.99.2 | 0.000092 |
ORF1ab/nsp3 | 385 | I385T | aTc | aCc | 1 | 1 | AY.99.2 | 0.000092 |
ORF1ab/nsp3 | 385 | I385I | atC | atT | 1 | 1 | AZ.4 | 0.003356 |
ORF1ab/nsp3 | 385 | I385T | aTc | aCc | 1 | 1 | B | 0.000128 |
ORF1ab/nsp3 | 385 | I385L | Atc | Ctc | 1 | 1 | B.1 | 0.000009 |
ORF1ab/nsp3 | 385 | I385N | aTc | aAc | 1 | 1 | B.1.1 | 0.000018 |
ORF1ab/nsp3 | 385 | I385I | atC | atT | 1 | 1 | B.1.1.1 | 0.000327 |
ORF1ab/nsp3 | 385 | I385L | Atc | Ctc | 1 | 1 | B.1.1.1 | 0.000327 |
ORF1ab/nsp3 | 385 | I385I | atC | atT | 1 | 1 | B.1.1.112 | 0.058824 |
ORF1ab/nsp3 | 385 | I385T | aTc | aCc | 1 | 1 | B.1.1.133 | 0.008475 |
ORF1ab/nsp3 | 385 | I385V | Atc | Gtc | 1 | 1 | B.1.1.141 | 0.002012 |
ORF1ab/nsp3 | 385 | I385I | atC | atT | 1 | 1 | B.1.1.157 | 0.000913 |
ORF1ab/nsp3 | 385 | I385I | atC | atT | 1 | 1 | B.1.1.171 | 0.003676 |
ORF1ab/nsp3 | 385 | I385del | ATC | --- | 1 | 1 | B.1.1.192 | 0.002309 |
ORF1ab/nsp3 | 385 | I385T | aTc | aCc | 1 | 1 | B.1.1.221 | 0.010101 |
ORF1ab/nsp3 | 385 | I385N | aTc | aAc | 1 | 1 | B.1.1.221 | 0.010101 |
ORF1ab/nsp3 | 385 | I385del | ATC | --- | 1 | 1 | B.1.1.221 | 0.010101 |
ORF1ab/nsp3 | 385 | I385I | atC | atT | 1 | 1 | B.1.1.231 | 0.003096 |
ORF1ab/nsp3 | 385 | I385I | atC | atT | 1 | 1 | B.1.1.237 | 0.005405 |
ORF1ab/nsp3 | 385 | I385I | atC | atT | 1 | 1 | B.1.1.277 | 0.000759 |
ORF1ab/nsp3 | 385 | I385I | atC | atT | 1 | 1 | B.1.1.289 | 0.002083 |
ORF1ab/nsp3 | 385 | I385I | atC | atT | 1 | 1 | B.1.1.291 | 0.000742 |
ORF1ab/nsp3 | 385 | I385I | atC | atT | 1 | 1 | B.1.1.301 | 0.001179 |
ORF1ab/nsp3 | 385 | I385I | atC | atT | 1 | 1 | B.1.1.307 | 0.002532 |
ORF1ab/nsp3 | 385 | I385V | Atc | Gtc | 1 | 1 | B.1.1.308 | 0.011765 |
ORF1ab/nsp3 | 385 | I385del | ATC | --- | 1 | 1 | B.1.1.315 | 0.008475 |
ORF1ab/nsp3 | 385 | I385V | Atc | Gtc | 1 | 1 | B.1.1.318 | 0.000302 |
ORF1ab/nsp3 | 385 | I385A | ATC | GCT | 1 | 1 | B.1.1.318 | 0.000302 |
ORF1ab/nsp3 | 385 | I385del | ATC | --- | 1 | 1 | B.1.1.33 | 0.000421 |
ORF1ab/nsp3 | 385 | I385I | atC | atT | 1 | 1 | B.1.1.348 | 0.000796 |
ORF1ab/nsp3 | 385 | I385T | aTc | aCc | 1 | 1 | B.1.1.37 | 0.000193 |
ORF1ab/nsp3 | 385 | I385L | Atc | Ctc | 1 | 1 | B.1.1.384 | 0.02381 |
ORF1ab/nsp3 | 385 | I385I | atC | atA | 1 | 1 | B.1.1.398 | 0.003226 |
ORF1ab/nsp3 | 385 | I385I | atC | atT | 1 | 1 | B.1.1.40 | 0.034483 |
ORF1ab/nsp3 | 385 | I385I | atC | atT | 1 | 1 | B.1.1.409 | 0.002833 |
ORF1ab/nsp3 | 385 | I385I | atC | atT | 1 | 1 | B.1.1.44 | 0.00241 |
ORF1ab/nsp3 | 385 | I385T | aTc | aCc | 1 | 1 | B.1.1.50 | 0.000679 |
ORF1ab/nsp3 | 385 | I385T | aTc | aCc | 1 | 1 | B.1.1.519 | 0.00004 |
ORF1ab/nsp3 | 385 | I385del2 | ATc | --c | 1 | 1 | B.1.1.7 | 0.000001 |
ORF1ab/nsp3 | 385 | I385M | atC | atG | 1 | 1 | B.1.1.7 | 0.000001 |
ORF1ab/nsp3 | 385 | I385F | Atc | Ttc | 1 | 1 | B.1.1.7 | 0.000001 |
ORF1ab/nsp3 | 385 | I385T | aTc | aCc | 1 | 1 | B.1.13 | 0.002375 |
ORF1ab/nsp3 | 385 | I385del | ATC | --- | 1 | 1 | B.1.140 | 0.018868 |
ORF1ab/nsp3 | 385 | I385I | atC | atT | 1 | 1 | B.1.142 | 0.002899 |
ORF1ab/nsp3 | 385 | I385I | atC | atT | 1 | 1 | B.1.146 | 0.004237 |
ORF1ab/nsp3 | 385 | I385I | atC | atT | 1 | 1 | B.1.160.12 | 0.00641 |
ORF1ab/nsp3 | 385 | I385I | atC | atT | 1 | 1 | B.1.160.15 | 0.00495 |
ORF1ab/nsp3 | 385 | I385T | aTc | aCc | 1 | 1 | B.1.177 | 0.000013 |
ORF1ab/nsp3 | 385 | I385I | atC | atT | 1 | 1 | B.1.177.12 | 0.000152 |
ORF1ab/nsp3 | 385 | I385I | atC | atT | 1 | 1 | B.1.177.21 | 0.000076 |
ORF1ab/nsp3 | 385 | I385del | ATC | --- | 1 | 1 | B.1.177.4 | 0.000211 |
ORF1ab/nsp3 | 385 | I385N | aTc | aAc | 1 | 1 | B.1.177.40 | 0.005155 |
ORF1ab/nsp3 | 385 | I385I | atC | atT | 1 | 1 | B.1.177.41 | 0.0025 |
ORF1ab/nsp3 | 385 | I385I | atC | atT | 1 | 1 | B.1.177.57 | 0.000281 |
ORF1ab/nsp3 | 385 | I385T | aTc | aCc | 1 | 1 | B.1.177.60 | 0.000218 |
ORF1ab/nsp3 | 385 | I385I | atC | atT | 1 | 1 | B.1.177.7 | 0.000165 |
ORF1ab/nsp3 | 385 | I385I | atC | atT | 1 | 1 | B.1.177.73 | 0.000566 |
ORF1ab/nsp3 | 385 | I385I | atC | atT | 1 | 1 | B.1.177.75 | 0.001041 |
ORF1ab/nsp3 | 385 | I385T | aTc | aCc | 1 | 1 | B.1.177.78 | 0.009709 |
ORF1ab/nsp3 | 385 | I385I | atC | atT | 1 | 1 | B.1.177.81 | 0.000189 |
ORF1ab/nsp3 | 385 | I385N | aTc | aAc | 1 | 1 | B.1.184 | 0.058824 |
ORF1ab/nsp3 | 385 | I385I | atC | atT | 1 | 1 | B.1.213 | 0.014925 |
ORF1ab/nsp3 | 385 | I385del | ATC | --- | 1 | 1 | B.1.221 | 0.000071 |
ORF1ab/nsp3 | 385 | I385del | ATC | --- | 1 | 1 | B.1.223 | 0.002778 |
ORF1ab/nsp3 | 385 | I385I | atC | atT | 1 | 1 | B.1.235 | 0.002519 |
ORF1ab/nsp3 | 385 | I385I | atC | atT | 1 | 1 | B.1.239 | 0.001221 |
ORF1ab/nsp3 | 385 | I385V | Atc | Gtc | 1 | 1 | B.1.243 | 0.00007 |
ORF1ab/nsp3 | 385 | I385I | atC | atT | 1 | 1 | B.1.243.2 | 0.014493 |
ORF1ab/nsp3 | 385 | I385T | aTc | aCc | 1 | 1 | B.1.258 | 0.000067 |
ORF1ab/nsp3 | 385 | I385I | atC | atT | 1 | 1 | B.1.258.16 | 0.001637 |
ORF1ab/nsp3 | 385 | I385del | ATC | --- | 1 | 1 | B.1.258.17 | 0.000104 |
ORF1ab/nsp3 | 385 | I385I | atC | atT | 1 | 1 | B.1.258.3 | 0.001675 |
ORF1ab/nsp3 | 385 | I385I | atC | atT | 1 | 1 | B.1.279 | 0.000514 |
ORF1ab/nsp3 | 385 | I385I | atC | atT | 1 | 1 | B.1.3 | 0.002618 |
ORF1ab/nsp3 | 385 | I385I | atC | atA | 1 | 1 | B.1.301 | 0.005917 |
ORF1ab/nsp3 | 385 | I385I | atC | atT | 1 | 1 | B.1.308 | 0.034483 |
ORF1ab/nsp3 | 385 | I385I | atC | atT | 1 | 1 | B.1.318 | 0.038462 |
ORF1ab/nsp3 | 385 | I385I | atC | atT | 1 | 1 | B.1.320 | 0.001245 |
ORF1ab/nsp3 | 385 | I385V | Atc | Gtc | 1 | 1 | B.1.326 | 0.007576 |
ORF1ab/nsp3 | 385 | I385I | atC | atT | 1 | 1 | B.1.329 | 0.000608 |
ORF1ab/nsp3 | 385 | I385I | atC | atT | 1 | 1 | B.1.350 | 0.002933 |
ORF1ab/nsp3 | 385 | I385del | ATC | --- | 1 | 1 | B.1.351 | 0.00003 |
ORF1ab/nsp3 | 385 | I385del | ATC | --- | 1 | 1 | B.1.351.2 | 0.000303 |
ORF1ab/nsp3 | 385 | I385T | aTC | aCA | 1 | 1 | B.1.36 | 0.000146 |
ORF1ab/nsp3 | 385 | I385I | atC | atT | 1 | 1 | B.1.36.1 | 0.00114 |
ORF1ab/nsp3 | 385 | I385I | atC | atT | 1 | 1 | B.1.36.18 | 0.00042 |
ORF1ab/nsp3 | 385 | I385I | atC | atT | 1 | 1 | B.1.36.26 | 0.002857 |
ORF1ab/nsp3 | 385 | I385del | ATC | --- | 1 | 1 | B.1.36.29 | 0.000517 |
ORF1ab/nsp3 | 385 | I385I | atC | atT | 1 | 1 | B.1.36.31 | 0.001751 |
ORF1ab/nsp3 | 385 | I385T | aTc | aCc | 1 | 1 | B.1.36.38 | 0.001642 |
ORF1ab/nsp3 | 385 | I385T | aTc | aCc | 1 | 1 | B.1.369 | 0.000285 |
ORF1ab/nsp3 | 385 | I385I | atC | atT | 1 | 1 | B.1.39 | 0.003906 |
ORF1ab/nsp3 | 385 | I385I | atC | atT | 1 | 1 | B.1.404 | 0.001302 |
ORF1ab/nsp3 | 385 | I385I | atC | atT | 1 | 1 | B.1.411 | 0.003704 |
ORF1ab/nsp3 | 385 | I385I | atC | atT | 1 | 1 | B.1.421 | 0.007463 |
ORF1ab/nsp3 | 385 | I385V | Atc | Gtc | 1 | 1 | B.1.427 | 0.00005 |
ORF1ab/nsp3 | 385 | I385T | aTc | aCc | 1 | 1 | B.1.438.1 | 0.000107 |
ORF1ab/nsp3 | 385 | I385T | aTc | aCc | 1 | 1 | B.1.443 | 0.004673 |
ORF1ab/nsp3 | 385 | I385V | Atc | Gtc | 1 | 1 | B.1.443 | 0.004673 |
ORF1ab/nsp3 | 385 | I385I | atC | atT | 1 | 1 | B.1.468 | 0.005714 |
ORF1ab/nsp3 | 385 | I385I | atC | atT | 1 | 1 | B.1.499 | 0.00105 |
ORF1ab/nsp3 | 385 | I385T | aTc | aCc | 1 | 1 | B.1.507 | 0.011236 |
ORF1ab/nsp3 | 385 | I385I | atC | atT | 1 | 1 | B.1.509 | 0.000866 |
ORF1ab/nsp3 | 385 | I385I | atC | atT | 1 | 1 | B.1.513 | 0.013889 |
ORF1ab/nsp3 | 385 | I385T | aTc | aCc | 1 | 1 | B.1.516 | 0.001957 |
ORF1ab/nsp3 | 385 | I385S | aTc | aGc | 1 | 1 | B.1.517 | 0.000427 |
ORF1ab/nsp3 | 385 | I385I | atC | atA | 1 | 1 | B.1.524 | 0.001406 |
ORF1ab/nsp3 | 385 | I385I | atC | atT | 1 | 1 | B.1.558 | 0.004566 |
ORF1ab/nsp3 | 385 | I385L | Atc | Ctc | 1 | 1 | B.1.575 | 0.000303 |
ORF1ab/nsp3 | 385 | I385I | atC | atT | 1 | 1 | B.1.590 | 0.004545 |
ORF1ab/nsp3 | 385 | I385V | Atc | Gtc | 1 | 1 | B.1.596 | 0.000087 |
ORF1ab/nsp3 | 385 | I385L | Atc | Ctc | 1 | 1 | B.1.596 | 0.000087 |
ORF1ab/nsp3 | 385 | I385T | aTc | aCc | 1 | 1 | B.1.621 | 0.000089 |
ORF1ab/nsp3 | 385 | I385F | Atc | Ttc | 1 | 1 | B.1.621 | 0.000089 |
ORF1ab/nsp3 | 385 | I385I | atC | atA | 1 | 1 | B.1.623 | 0.000536 |
ORF1ab/nsp3 | 385 | I385I | atC | atT | 1 | 1 | B.1.628 | 0.000352 |
ORF1ab/nsp3 | 385 | I385I | atC | atT | 1 | 1 | B.31 | 0.003731 |
ORF1ab/nsp3 | 385 | I385T | aTc | aCc | 1 | 1 | B.4 | 0.002208 |
ORF1ab/nsp3 | 385 | I385del | ATC | --- | 1 | 1 | B.57 | 0.015152 |
ORF1ab/nsp3 | 385 | I385I | atC | atT | 1 | 1 | C.1 | 0.002392 |
ORF1ab/nsp3 | 385 | I385V | Atc | Gtc | 1 | 1 | C.1.2 | 0.004255 |
ORF1ab/nsp3 | 385 | I385I | atC | atT | 1 | 1 | C.36 | 0.000911 |
ORF1ab/nsp3 | 385 | I385del | ATC | --- | 1 | 1 | C.37 | 0.000116 |
ORF1ab/nsp3 | 385 | I385V | Atc | Gtc | 1 | 1 | D.2 | 0.000075 |
ORF1ab/nsp3 | 385 | I385I | atC | atT | 1 | 1 | D.3 | 0.005917 |
ORF1ab/nsp3 | 385 | I385I | atC | atT | 1 | 1 | N.5 | 0.001767 |
ORF1ab/nsp3 | 385 | I385del | ATC | --- | 1 | 1 | N.6 | 0.007092 |
ORF1ab/nsp3 | 385 | I385I | atC | atT | 1 | 1 | N.9 | 0.005952 |
ORF1ab/nsp3 | 385 | I385del | ATC | --- | 1 | 1 | P.1 | 0.000016 |
ORF1ab/nsp3 | 385 | I385I | atC | atT | 1 | 1 | P.1.12 | 0.000484 |
ORF1ab/nsp3 | 385 | I385T | aTc | aCc | 1 | 1 | P.1.12 | 0.000484 |
ORF1ab/nsp3 | 385 | I385S | aTc | aGc | 1 | 1 | P.1.15 | 0.000232 |
ORF1ab/nsp3 | 385 | I385V | Atc | Gtc | 1 | 1 | P.1.15 | 0.000232 |
ORF1ab/nsp3 | 385 | I385T | aTc | aCc | 1 | 1 | P.1.2 | 0.001156 |
ORF1ab/nsp3 | 385 | I385V | Atc | Gtc | 1 | 1 | P.1.2 | 0.001156 |
ORF1ab/nsp3 | 385 | I385I | atC | atT | 1 | 1 | P.1.4 | 0.000977 |
ORF1ab/nsp3 | 385 | I385I | atC | atT | 1 | 1 | P.1.6 | 0.001946 |
ORF1ab/nsp3 | 385 | I385S | aTc | aGc | 1 | 1 | P.2 | 0.000187 |
ORF1ab/nsp3 | 385 | I385T | aTc | aCc | 1 | 1 | Q.1 | 0.000126 |
ORF1ab/nsp3 | 385 | I385del | ATC | --- | 1 | 1 | Q.2 | 0.000613 |
ORF1ab/nsp3 | 385 | I385I | atC | atT | 1 | 1 | Q.3 | 0.000145 |
ORF1ab/nsp3 | 385 | I385del | ATC | --- | 1 | 1 | R.1 | 0.00009 |
ORF1ab/nsp3 | 385 | I385I | atC | atT | 1 | 1 | W.3 | 0.005263 |
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CoV-GLUE is still in development. CoV-GLUE was originally developed as part of COG-UK by Josh Singer using the GLUE framework at the MRC-University of Glasgow Centre for Virus Research (CVR). In 2021 it was redeveloped by Richard Orton to scale to the millions of genome sequences available. We acknowledge support from the MRC (MC_UU_12014/12), WT (220977/Z/20/Z) and UKRI G2P (MR/W005611/1). Please contact Richard Orton with any queries: Richard.Orton@glasgow.ac.uk
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