CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF1ab/nsp3 : CodonNum = 371 & Codon = agT

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF1ab/nsp3371S371SS1189SsynagCagT6166110.9918833830-3832

Details of the mutation no within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF1ab/nsp3371S371SagCagT611616All0.000117
ORF1ab/nsp3371S371SagCagT125125B.1.20.001101
ORF1ab/nsp3371S371SagCagT107112B.1.1.70.000096
ORF1ab/nsp3371S371SagCagT6363AY.40.000098
ORF1ab/nsp3371S371SagCagT4747AY.39.10.001862
ORF1ab/nsp3371S371SagCagT3333AY.440.000201
ORF1ab/nsp3371S371SagCagT1616B.1.617.20.00006
ORF1ab/nsp3371S371SagCagT1515AY.250.00009
ORF1ab/nsp3371S371SagCagT1414AY.370.004425
ORF1ab/nsp3371S371SagCagT1414B.1.1.2220.002856
ORF1ab/nsp3371S371SagCagT1414B.1.214.30.1
ORF1ab/nsp3371S371SagCagT1212B.10.00011
ORF1ab/nsp3371S371SagCagT99B.1.10.000163
ORF1ab/nsp3371S371SagCagT88AY.980.000632
ORF1ab/nsp3371S371SagCagT88B.1.1.2320.014519
ORF1ab/nsp3371S371SagCagT88B.1.1600.00025
ORF1ab/nsp3371S371SagCagT66AY.1030.000037
ORF1ab/nsp3371S371SagCagT55N.90.029762
ORF1ab/nsp3371S371SagCagT44C.36.30.002269
ORF1ab/nsp3371S371SagCagT33AY.260.000085
ORF1ab/nsp3371S371SagCagT33AY.30.00003
ORF1ab/nsp3371S371SagCagT33AY.430.000013
ORF1ab/nsp3371S371SagCagT33AY.470.000093
ORF1ab/nsp3371S371SagCagT33AY.540.000286
ORF1ab/nsp3371S371SagCagT33B.1.1770.00004
ORF1ab/nsp3371S371SagCagT33B.1.3510.000089
ORF1ab/nsp3371S371SagCagT33B.1.360.000438
ORF1ab/nsp3371S371SagCagT33B.1.4270.000151
ORF1ab/nsp3371S371SagCagT33P.10.000047
ORF1ab/nsp3371S371SagCagT22A.10.000564
ORF1ab/nsp3371S371SagCagT22AY.1180.000125
ORF1ab/nsp3371S371SagCagT22AY.1200.000074
ORF1ab/nsp3371S371SagCagT22AY.200.000078
ORF1ab/nsp3371S371SagCagT22AY.390.000049
ORF1ab/nsp3371S371SagCagT22AY.46.60.000144
ORF1ab/nsp3371S371SagCagT22AY.60.000082
ORF1ab/nsp3371S371SagCagT22AY.98.10.000097
ORF1ab/nsp3371S371SagCagT22B.1.2210.000142
ORF1ab/nsp3371S371SagCagT22B.1.36.180.00084
ORF1ab/nsp3371S371SagCagT22B.1.4290.000047
ORF1ab/nsp3371S371SagCagT22B.1.438.10.000215
ORF1ab/nsp3371S371SagCagT22B.1.466.20.000782
ORF1ab/nsp3371S371SagCagT22B.1.5260.000047
ORF1ab/nsp3371S371SagCagT22B.1.5650.001621
ORF1ab/nsp3371S371SagCagT110.055556
ORF1ab/nsp3371S371SagCagT11A.2.50.000499
ORF1ab/nsp3371S371SagCagT11AD.20.000219
ORF1ab/nsp3371S371SagCagT11AY.1000.000046
ORF1ab/nsp3371S371SagCagT11AY.1020.000027
ORF1ab/nsp3371S371SagCagT11AY.130.000161
ORF1ab/nsp3371S371SagCagT11AY.140.000088
ORF1ab/nsp3371S371SagCagT11AY.230.00007
ORF1ab/nsp3371S371SagCagT11AY.3.10.000085
ORF1ab/nsp3371S371SagCagT11AY.4.40.000409
ORF1ab/nsp3371S371SagCagT11AY.450.000122
ORF1ab/nsp3371S371SagCagT11AY.460.000104
ORF1ab/nsp3371S371SagCagT11AY.46.40.000165
ORF1ab/nsp3371S371SagCagT11AY.510.000909
ORF1ab/nsp3371S371SagCagT11AY.560.001605
ORF1ab/nsp3371S371SagCagT11AY.610.000105
ORF1ab/nsp3371S371SagCagT11AY.70.000196
ORF1ab/nsp3371S371SagCagT11AY.880.000884
ORF1ab/nsp3371S371SagCagT11B.1.1.2980.000862
ORF1ab/nsp3371S371SagCagT11B.1.1.3010.001179
ORF1ab/nsp3371S371SagCagT11B.1.1.3290.003846
ORF1ab/nsp3371S371SagCagT11B.1.1.3690.000446
ORF1ab/nsp3371S371SagCagT11B.1.1.5160.066667
ORF1ab/nsp3371S371SagCagT11B.1.1.5190.00004
ORF1ab/nsp3371S371SagCagT11B.1.160.200.008929
ORF1ab/nsp3371S371SagCagT11B.1.177.70.000165
ORF1ab/nsp3371S371SagCagT11B.1.177.810.000189
ORF1ab/nsp3371S371SagCagT11B.1.258.170.000104
ORF1ab/nsp3371S371SagCagT11B.1.351.20.000303
ORF1ab/nsp3371S371SagCagT11B.1.351.50.0006
ORF1ab/nsp3371S371SagCagT11B.1.36.290.000517
ORF1ab/nsp3371S371SagCagT11B.1.4000.000429
ORF1ab/nsp3371S371SagCagT11B.1.5250.000113
ORF1ab/nsp3371S371SagCagT11B.1.5400.009709
ORF1ab/nsp3371S371SagCagT11B.1.575.10.002439
ORF1ab/nsp3371S371SagCagT11B.1.617.10.000129
ORF1ab/nsp3371S371SagCagT11B.1.6370.000073
ORF1ab/nsp3371S371SagCagT11B.1.9.40.006135
ORF1ab/nsp3371S371SagCagT11B.60.00091
ORF1ab/nsp3371S371SagCagT11C.350.000774
ORF1ab/nsp3371S371SagCagT11P.1.140.000048
ORF1ab/nsp3371S371SagCagT11P.1.150.000232
ORF1ab/nsp3371S371SagCagT11Q.80.000165