CoV-GLUE | Mutations | Mutation
Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):
ORF | CodonNum | Mut | ORF1abMut | MutType | RefCodon | MutCodon | AACount | CodonCount | CodonProp | Genome Position |
ORF1ab/nsp3 | 370 | S370L | S1188L | nonsyn | tCa | tTa | 119888 | 119870 | 0.99985 | 3827-3829 |
ORF1ab/nsp3 | 370 | S370L | S1188L | nonsyn | tCA | tTG | 119888 | 14 | 0.000116776 | 3827-3829 |
ORF1ab/nsp3 | 370 | S370L | S1188L | nonsyn | TCa | CTa | 119888 | 2 | 0.0000166822 | 3827-3829 |
ORF1ab/nsp3 | 370 | S370L | S1188L | nonsyn | TCA | CTT | 119888 | 2 | 0.0000166822 | 3827-3829 |
ORF1ab/nsp3 | 370 | S370S | S1188S | syn | tcA | tcG | 272 | 143 | 0.525735 | 3827-3829 |
ORF1ab/nsp3 | 370 | S370S | S1188S | syn | tcA | tcC | 272 | 85 | 0.3125 | 3827-3829 |
ORF1ab/nsp3 | 370 | S370S | S1188S | syn | tcA | tcT | 272 | 33 | 0.121324 | 3827-3829 |
ORF1ab/nsp3 | 370 | S370S | S1188S | syn | TCA | AGT | 272 | 11 | 0.0404412 | 3827-3829 |
ORF1ab/nsp3 | 370 | S370P | S1188P | nonsyn | Tca | Cca | 176 | 175 | 0.994318 | 3827-3829 |
ORF1ab/nsp3 | 370 | S370P | S1188P | nonsyn | TcA | CcT | 176 | 1 | 0.00568182 | 3827-3829 |
ORF1ab/nsp3 | 370 | S370I | S1188I | nonsyn | TCA | ATT | 80 | 43 | 0.5375 | 3827-3829 |
ORF1ab/nsp3 | 370 | S370I | S1188I | nonsyn | TCa | ATa | 80 | 35 | 0.4375 | 3827-3829 |
ORF1ab/nsp3 | 370 | S370I | S1188I | nonsyn | TCA | ATC | 80 | 2 | 0.025 | 3827-3829 |
ORF1ab/nsp3 | 370 | S370del | S1188del | del | TCA | --- | 70 | 70 | 1 | 3827-3829 |
ORF1ab/nsp3 | 370 | S370A | S1188A | nonsyn | Tca | Gca | 68 | 68 | 1 | 3827-3829 |
ORF1ab/nsp3 | 370 | S370X | S1188X | nonsyn | tCa | tAa | 57 | 40 | 0.701754 | 3827-3829 |
ORF1ab/nsp3 | 370 | S370X | S1188X | nonsyn | tCa | tGa | 57 | 10 | 0.175439 | 3827-3829 |
ORF1ab/nsp3 | 370 | S370X | S1188X | nonsyn | tCA | tAG | 57 | 7 | 0.122807 | 3827-3829 |
ORF1ab/nsp3 | 370 | S370F | S1188F | nonsyn | tCA | tTT | 55 | 50 | 0.909091 | 3827-3829 |
ORF1ab/nsp3 | 370 | S370F | S1188F | nonsyn | tCA | tTC | 55 | 5 | 0.0909091 | 3827-3829 |
ORF1ab/nsp3 | 370 | S370Y | S1188Y | nonsyn | tCA | tAT | 39 | 37 | 0.948718 | 3827-3829 |
ORF1ab/nsp3 | 370 | S370Y | S1188Y | nonsyn | tCA | tAC | 39 | 2 | 0.0512821 | 3827-3829 |
ORF1ab/nsp3 | 370 | S370K | S1188K | nonsyn | TCa | AAa | 38 | 32 | 0.842105 | 3827-3829 |
ORF1ab/nsp3 | 370 | S370K | S1188K | nonsyn | TCA | AAG | 38 | 6 | 0.157895 | 3827-3829 |
ORF1ab/nsp3 | 370 | S370N | S1188N | nonsyn | TCA | AAT | 37 | 35 | 0.945946 | 3827-3829 |
ORF1ab/nsp3 | 370 | S370N | S1188N | nonsyn | TCA | AAC | 37 | 2 | 0.0540541 | 3827-3829 |
ORF1ab/nsp3 | 370 | S370del1 | S1188del1 | del | tCa | t-a | 24 | 19 | 0.791667 | 3827-3829 |
ORF1ab/nsp3 | 370 | S370del1 | S1188del1 | del | tcA | tc- | 24 | 4 | 0.166667 | 3827-3829 |
ORF1ab/nsp3 | 370 | S370del1 | S1188del1 | del | tCA | tT- | 24 | 1 | 0.0416667 | 3827-3829 |
ORF1ab/nsp3 | 370 | S370C | S1188C | nonsyn | tCA | tGT | 15 | 13 | 0.866667 | 3827-3829 |
ORF1ab/nsp3 | 370 | S370C | S1188C | nonsyn | tCA | tGC | 15 | 2 | 0.133333 | 3827-3829 |
ORF1ab/nsp3 | 370 | S370T | S1188T | nonsyn | Tca | Aca | 13 | 12 | 0.923077 | 3827-3829 |
ORF1ab/nsp3 | 370 | S370R | S1188R | nonsyn | TCa | AGa | 13 | 8 | 0.615385 | 3827-3829 |
ORF1ab/nsp3 | 370 | S370R | S1188R | nonsyn | TCA | AGG | 13 | 5 | 0.384615 | 3827-3829 |
ORF1ab/nsp3 | 370 | S370T | S1188T | nonsyn | TcA | AcT | 13 | 1 | 0.0769231 | 3827-3829 |
ORF1ab/nsp3 | 370 | S370M | S1188M | nonsyn | TCA | ATG | 9 | 9 | 1 | 3827-3829 |
ORF1ab/nsp3 | 370 | S370V | S1188V | nonsyn | TCA | GTT | 7 | 3 | 0.428571 | 3827-3829 |
ORF1ab/nsp3 | 370 | S370V | S1188V | nonsyn | TCA | GTG | 7 | 2 | 0.285714 | 3827-3829 |
ORF1ab/nsp3 | 370 | S370V | S1188V | nonsyn | TCA | GTC | 7 | 2 | 0.285714 | 3827-3829 |
ORF1ab/nsp3 | 370 | S370del2 | S1188del2 | del | tCA | t-- | 6 | 5 | 0.833333 | 3827-3829 |
ORF1ab/nsp3 | 370 | S370del2 | S1188del2 | del | TCa | --a | 6 | 1 | 0.166667 | 3827-3829 |
ORF1ab/nsp3 | 370 | S370W | S1188W | nonsyn | tCA | tGG | 5 | 5 | 1 | 3827-3829 |
ORF1ab/nsp3 | 370 | S370G | S1188G | nonsyn | TCA | GGT | 2 | 1 | 0.5 | 3827-3829 |
ORF1ab/nsp3 | 370 | S370G | S1188G | nonsyn | TCA | GGC | 2 | 1 | 0.5 | 3827-3829 |
ORF1ab/nsp3 | 370 | S370Q | S1188Q | nonsyn | TCa | CAa | 1 | 1 | 1 | 3827-3829 |
ORF1ab/nsp3 | 370 | S370E | S1188E | nonsyn | TCA | GAG | 1 | 1 | 1 | 3827-3829 |
ORF1ab/nsp3 | 370 | S370H | S1188H | nonsyn | TCA | CAT | 1 | 1 | 1 | 3827-3829 |
ORF1ab/nsp3 | 370 | S370D | S1188D | nonsyn | TCA | GAT | 1 | 1 | 1 | 3827-3829 |
Details of the mutation no within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):
ORF | CodonNum | Mut | RefCodon | MutCodon | CodonCount | AACount | Lineage | LineageCodonProp |
ORF1ab/nsp3 | 370 | S370L | tCa | tTa | 119870 | 119888 | All | 0.022927 |
ORF1ab/nsp3 | 370 | S370L | tCA | tTG | 14 | 119888 | All | 0.000003 |
ORF1ab/nsp3 | 370 | S370L | TCa | CTa | 2 | 119888 | All | 0 |
ORF1ab/nsp3 | 370 | S370L | TCA | CTT | 2 | 119888 | All | 0 |
ORF1ab/nsp3 | 370 | S370L | tCa | tTa | 62131 | 62132 | P.1 | 0.978811 |
ORF1ab/nsp3 | 370 | S370L | tCA | tTG | 1 | 62132 | P.1 | 0.000016 |
ORF1ab/nsp3 | 370 | S370L | tCa | tTa | 20862 | 20862 | P.1.14 | 0.997228 |
ORF1ab/nsp3 | 370 | S370L | tCa | tTa | 6131 | 6131 | P.1.17 | 0.99175 |
ORF1ab/nsp3 | 370 | S370L | tCa | tTa | 4228 | 4228 | P.1.15 | 0.982342 |
ORF1ab/nsp3 | 370 | S370L | tCa | tTa | 3678 | 3678 | P.1.10 | 0.991108 |
ORF1ab/nsp3 | 370 | S370L | tCa | tTa | 3063 | 3063 | P.1.7 | 0.977969 |
ORF1ab/nsp3 | 370 | S370L | tCa | tTa | 2970 | 2970 | P.1.1 | 0.943456 |
ORF1ab/nsp3 | 370 | S370L | tCa | tTa | 2619 | 2619 | P.1.16 | 0.979798 |
ORF1ab/nsp3 | 370 | S370L | tCa | tTa | 1914 | 1914 | P.1.12 | 0.926428 |
ORF1ab/nsp3 | 370 | S370L | tCa | tTa | 1370 | 1384 | B.1.1.7 | 0.001226 |
ORF1ab/nsp3 | 370 | S370L | tCA | tTG | 10 | 1384 | B.1.1.7 | 0.000009 |
ORF1ab/nsp3 | 370 | S370L | TCa | CTa | 2 | 1384 | B.1.1.7 | 0.000002 |
ORF1ab/nsp3 | 370 | S370L | TCA | CTT | 2 | 1384 | B.1.1.7 | 0.000002 |
ORF1ab/nsp3 | 370 | S370L | tCa | tTa | 1111 | 1111 | P.1.17.1 | 0.972003 |
ORF1ab/nsp3 | 370 | S370L | tCa | tTa | 1081 | 1081 | P.1.13 | 0.971249 |
ORF1ab/nsp3 | 370 | S370L | tCa | tTa | 1070 | 1070 | AY.4 | 0.001665 |
ORF1ab/nsp3 | 370 | S370L | tCa | tTa | 1023 | 1023 | P.1.4 | 0.999023 |
ORF1ab/nsp3 | 370 | S370L | tCa | tTa | 854 | 854 | P.1.2 | 0.987283 |
ORF1ab/nsp3 | 370 | S370L | tCa | tTa | 674 | 674 | AY.70 | 0.140534 |
ORF1ab/nsp3 | 370 | S370L | tCa | tTa | 514 | 514 | P.1.6 | 1 |
ORF1ab/nsp3 | 370 | S370L | tCa | tTa | 383 | 383 | B.1.617.2 | 0.001442 |
ORF1ab/nsp3 | 370 | S370S | tcA | tcG | 143 | 272 | All | 0.000027 |
ORF1ab/nsp3 | 370 | S370S | tcA | tcC | 85 | 272 | All | 0.000016 |
ORF1ab/nsp3 | 370 | S370S | tcA | tcT | 33 | 272 | All | 0.000006 |
ORF1ab/nsp3 | 370 | S370S | TCA | AGT | 11 | 272 | All | 0.000002 |
ORF1ab/nsp3 | 370 | S370L | tCa | tTa | 272 | 272 | B.1.2 | 0.002395 |
ORF1ab/nsp3 | 370 | S370L | tCa | tTa | 220 | 220 | B.1.1.70 | 0.075034 |
ORF1ab/nsp3 | 370 | S370L | tCa | tTa | 208 | 208 | P.1.8 | 0.995215 |
ORF1ab/nsp3 | 370 | S370L | tCa | tTa | 205 | 205 | P.1.9 | 0.985577 |
ORF1ab/nsp3 | 370 | S370L | tCa | tTa | 185 | 185 | AY.120 | 0.006878 |
ORF1ab/nsp3 | 370 | S370L | tCa | tTa | 183 | 183 | B.1 | 0.001676 |
ORF1ab/nsp3 | 370 | S370L | tCa | tTa | 177 | 177 | B.1.1.222 | 0.036108 |
ORF1ab/nsp3 | 370 | S370P | Tca | Cca | 175 | 176 | All | 0.000033 |
ORF1ab/nsp3 | 370 | S370P | TcA | CcT | 1 | 176 | All | 0 |
ORF1ab/nsp3 | 370 | S370L | tCa | tTa | 144 | 144 | AY.25 | 0.000866 |
ORF1ab/nsp3 | 370 | S370L | tCa | tTa | 130 | 130 | AY.43 | 0.000576 |
ORF1ab/nsp3 | 370 | S370L | tCa | tTa | 119 | 119 | AY.3 | 0.001184 |
ORF1ab/nsp3 | 370 | S370L | tCa | tTa | 111 | 111 | B.1.177.82 | 0.052983 |
ORF1ab/nsp3 | 370 | S370L | tCa | tTa | 98 | 98 | B.1.1 | 0.001778 |
ORF1ab/nsp3 | 370 | S370L | tCa | tTa | 98 | 98 | B.1.177.65 | 0.065203 |
ORF1ab/nsp3 | 370 | S370L | tCa | tTa | 98 | 98 | P.1.11 | 1 |
ORF1ab/nsp3 | 370 | S370L | tCa | tTa | 92 | 92 | AY.44 | 0.00056 |
ORF1ab/nsp3 | 370 | S370L | tCa | tTa | 86 | 86 | B.1.526 | 0.002021 |
ORF1ab/nsp3 | 370 | S370L | tCa | tTa | 83 | 83 | P.1.10.1 | 0.674797 |
ORF1ab/nsp3 | 370 | S370I | TCA | ATT | 43 | 80 | All | 0.000008 |
ORF1ab/nsp3 | 370 | S370I | TCa | ATa | 35 | 80 | All | 0.000007 |
ORF1ab/nsp3 | 370 | S370I | TCA | ATC | 2 | 80 | All | 0 |
ORF1ab/nsp3 | 370 | S370I | TCA | ATT | 39 | 74 | B.1.1.7 | 0.000035 |
ORF1ab/nsp3 | 370 | S370I | TCa | ATa | 33 | 74 | B.1.1.7 | 0.00003 |
ORF1ab/nsp3 | 370 | S370I | TCA | ATC | 2 | 74 | B.1.1.7 | 0.000002 |
ORF1ab/nsp3 | 370 | S370del | TCA | --- | 70 | 70 | All | 0.000013 |
ORF1ab/nsp3 | 370 | S370S | tcA | tcC | 66 | 69 | B.1 | 0.000605 |
ORF1ab/nsp3 | 370 | S370S | tcA | tcG | 2 | 69 | B.1 | 0.000018 |
ORF1ab/nsp3 | 370 | S370S | TCA | AGT | 1 | 69 | B.1 | 0.000009 |
ORF1ab/nsp3 | 370 | S370A | Tca | Gca | 68 | 68 | All | 0.000013 |
ORF1ab/nsp3 | 370 | S370P | Tca | Cca | 64 | 65 | B.1.1.7 | 0.000057 |
ORF1ab/nsp3 | 370 | S370P | TcA | CcT | 1 | 65 | B.1.1.7 | 0.000001 |
ORF1ab/nsp3 | 370 | S370L | tCa | tTa | 63 | 63 | AY.26 | 0.001784 |
ORF1ab/nsp3 | 370 | S370L | tCa | tTa | 59 | 59 | AY.118 | 0.003696 |
ORF1ab/nsp3 | 370 | S370X | tCa | tAa | 40 | 57 | All | 0.000008 |
ORF1ab/nsp3 | 370 | S370X | tCa | tGa | 10 | 57 | All | 0.000002 |
ORF1ab/nsp3 | 370 | S370X | tCA | tAG | 7 | 57 | All | 0.000001 |
ORF1ab/nsp3 | 370 | S370F | tCA | tTT | 50 | 55 | All | 0.00001 |
ORF1ab/nsp3 | 370 | S370F | tCA | tTC | 5 | 55 | All | 0.000001 |
ORF1ab/nsp3 | 370 | S370L | tCa | tTa | 51 | 51 | AY.103 | 0.000317 |
ORF1ab/nsp3 | 370 | S370F | tCA | tTT | 46 | 50 | B.1.1.7 | 0.000041 |
ORF1ab/nsp3 | 370 | S370F | tCA | tTC | 4 | 50 | B.1.1.7 | 0.000004 |
ORF1ab/nsp3 | 370 | S370L | tCa | tTa | 49 | 49 | B.1.177 | 0.000645 |
ORF1ab/nsp3 | 370 | S370X | tCa | tAa | 31 | 48 | B.1.1.7 | 0.000028 |
ORF1ab/nsp3 | 370 | S370X | tCa | tGa | 10 | 48 | B.1.1.7 | 0.000009 |
ORF1ab/nsp3 | 370 | S370X | tCA | tAG | 7 | 48 | B.1.1.7 | 0.000006 |
ORF1ab/nsp3 | 370 | S370L | tCa | tTa | 46 | 46 | AY.119 | 0.001624 |
ORF1ab/nsp3 | 370 | S370L | tCa | tTa | 46 | 46 | B.1.1.519 | 0.001827 |
ORF1ab/nsp3 | 370 | S370S | tcA | tcG | 26 | 46 | B.1.1.7 | 0.000023 |
ORF1ab/nsp3 | 370 | S370S | TCA | AGT | 9 | 46 | B.1.1.7 | 0.000008 |
ORF1ab/nsp3 | 370 | S370S | tcA | tcT | 8 | 46 | B.1.1.7 | 0.000007 |
ORF1ab/nsp3 | 370 | S370S | tcA | tcC | 3 | 46 | B.1.1.7 | 0.000003 |
ORF1ab/nsp3 | 370 | S370L | tCa | tTa | 45 | 45 | C.37 | 0.005223 |
ORF1ab/nsp3 | 370 | S370L | tCa | tTa | 44 | 44 | B.1.128 | 0.027954 |
ORF1ab/nsp3 | 370 | S370L | tCa | tTa | 44 | 44 | B.1.429 | 0.001035 |
ORF1ab/nsp3 | 370 | S370L | tCa | tTa | 41 | 43 | AY.100 | 0.001886 |
ORF1ab/nsp3 | 370 | S370L | tCA | tTG | 2 | 43 | AY.100 | 0.000092 |
ORF1ab/nsp3 | 370 | S370L | tCa | tTa | 42 | 42 | AY.34 | 0.004073 |
ORF1ab/nsp3 | 370 | S370A | Tca | Gca | 42 | 42 | B.1.2 | 0.00037 |
ORF1ab/nsp3 | 370 | S370L | tCa | tTa | 40 | 40 | AY.98.1 | 0.001937 |
ORF1ab/nsp3 | 370 | S370Y | tCA | tAT | 37 | 39 | All | 0.000007 |
ORF1ab/nsp3 | 370 | S370Y | tCA | tAC | 2 | 39 | All | 0 |
ORF1ab/nsp3 | 370 | S370K | TCa | AAa | 32 | 38 | All | 0.000006 |
ORF1ab/nsp3 | 370 | S370K | TCA | AAG | 6 | 38 | All | 0.000001 |
ORF1ab/nsp3 | 370 | S370L | tCa | tTa | 38 | 38 | B.1.177.56 | 0.025367 |
ORF1ab/nsp3 | 370 | S370N | TCA | AAT | 35 | 37 | All | 0.000007 |
ORF1ab/nsp3 | 370 | S370N | TCA | AAC | 2 | 37 | All | 0 |
ORF1ab/nsp3 | 370 | S370Y | tCA | tAT | 35 | 37 | B.1.1.7 | 0.000031 |
ORF1ab/nsp3 | 370 | S370Y | tCA | tAC | 2 | 37 | B.1.1.7 | 0.000002 |
ORF1ab/nsp3 | 370 | S370K | TCa | AAa | 30 | 36 | B.1.1.7 | 0.000027 |
ORF1ab/nsp3 | 370 | S370K | TCA | AAG | 6 | 36 | B.1.1.7 | 0.000005 |
ORF1ab/nsp3 | 370 | S370N | TCA | AAT | 33 | 35 | B.1.1.7 | 0.00003 |
ORF1ab/nsp3 | 370 | S370N | TCA | AAC | 2 | 35 | B.1.1.7 | 0.000002 |
ORF1ab/nsp3 | 370 | S370L | tCa | tTa | 33 | 33 | B.1.351 | 0.000981 |
ORF1ab/nsp3 | 370 | S370L | tCa | tTa | 31 | 31 | B.1.240 | 0.006682 |
ORF1ab/nsp3 | 370 | S370L | tCa | tTa | 30 | 30 | B.1.258 | 0.001996 |
ORF1ab/nsp3 | 370 | S370L | tCa | tTa | 29 | 29 | P.1.3 | 1 |
ORF1ab/nsp3 | 370 | S370P | Tca | Cca | 26 | 26 | B.1.2 | 0.000229 |
ORF1ab/nsp3 | 370 | S370P | Tca | Cca | 25 | 25 | AY.3 | 0.000249 |
ORF1ab/nsp3 | 370 | S370del1 | tCa | t-a | 19 | 24 | All | 0.000004 |
ORF1ab/nsp3 | 370 | S370del1 | tcA | tc- | 4 | 24 | All | 0.000001 |
ORF1ab/nsp3 | 370 | S370del1 | tCA | tT- | 1 | 24 | All | 0 |
ORF1ab/nsp3 | 370 | S370L | tCa | tTa | 24 | 24 | P.1.10.2 | 1 |
ORF1ab/nsp3 | 370 | S370L | tCa | tTa | 23 | 23 | AY.113 | 0.003275 |
ORF1ab/nsp3 | 370 | S370S | tcA | tcG | 23 | 23 | B.1.1.519 | 0.000913 |
ORF1ab/nsp3 | 370 | S370L | tCa | tTa | 23 | 23 | B.1.517 | 0.009821 |
ORF1ab/nsp3 | 370 | S370L | tCa | tTa | 21 | 21 | B.1.177.81 | 0.003976 |
ORF1ab/nsp3 | 370 | S370L | tCa | tTa | 20 | 20 | AY.102 | 0.00053 |
ORF1ab/nsp3 | 370 | S370L | tCa | tTa | 20 | 20 | AY.4.2 | 0.000434 |
ORF1ab/nsp3 | 370 | S370L | tCa | tTa | 20 | 20 | AY.7.1 | 0.002254 |
ORF1ab/nsp3 | 370 | S370L | tCa | tTa | 19 | 19 | R.1 | 0.00171 |
ORF1ab/nsp3 | 370 | S370S | tcA | tcG | 11 | 18 | AY.4 | 0.000017 |
ORF1ab/nsp3 | 370 | S370S | tcA | tcT | 7 | 18 | AY.4 | 0.000011 |
ORF1ab/nsp3 | 370 | S370L | tCa | tTa | 18 | 18 | B.1.577 | 0.012371 |
ORF1ab/nsp3 | 370 | S370L | tCa | tTa | 17 | 17 | AY.1 | 0.006727 |
ORF1ab/nsp3 | 370 | S370L | tCa | tTa | 17 | 17 | AY.39 | 0.00042 |
ORF1ab/nsp3 | 370 | S370L | tCa | tTa | 16 | 16 | AY.75 | 0.000896 |
ORF1ab/nsp3 | 370 | S370L | tCa | tTa | 16 | 16 | B.1.426 | 0.016145 |
ORF1ab/nsp3 | 370 | S370C | tCA | tGT | 13 | 15 | All | 0.000002 |
ORF1ab/nsp3 | 370 | S370C | tCA | tGC | 2 | 15 | All | 0 |
ORF1ab/nsp3 | 370 | S370L | tCa | tTa | 15 | 15 | B.1.1.28 | 0.004669 |
ORF1ab/nsp3 | 370 | S370L | tCa | tTa | 14 | 14 | AY.20 | 0.000544 |
ORF1ab/nsp3 | 370 | S370L | tCa | tTa | 14 | 14 | P.2 | 0.002613 |
ORF1ab/nsp3 | 370 | S370T | Tca | Aca | 12 | 13 | All | 0.000002 |
ORF1ab/nsp3 | 370 | S370R | TCa | AGa | 8 | 13 | All | 0.000002 |
ORF1ab/nsp3 | 370 | S370R | TCA | AGG | 5 | 13 | All | 0.000001 |
ORF1ab/nsp3 | 370 | S370T | TcA | AcT | 1 | 13 | All | 0 |
ORF1ab/nsp3 | 370 | S370L | tCa | tTa | 13 | 13 | AY.30 | 0.005144 |
ORF1ab/nsp3 | 370 | S370C | tCA | tGT | 11 | 13 | B.1.1.7 | 0.00001 |
ORF1ab/nsp3 | 370 | S370C | tCA | tGC | 2 | 13 | B.1.1.7 | 0.000002 |
ORF1ab/nsp3 | 370 | S370L | tCa | tTa | 13 | 13 | B.1.427 | 0.000656 |
ORF1ab/nsp3 | 370 | S370L | tCa | tTa | 13 | 13 | B.1.621 | 0.001151 |
ORF1ab/nsp3 | 370 | S370L | tCa | tTa | 13 | 13 | P.1.5 | 1 |
ORF1ab/nsp3 | 370 | S370L | tCa | tTa | 12 | 12 | AY.46 | 0.001249 |
ORF1ab/nsp3 | 370 | S370L | tCa | tTa | 12 | 12 | AY.5 | 0.000248 |
ORF1ab/nsp3 | 370 | S370del | TCA | --- | 12 | 12 | AY.5 | 0.000248 |
ORF1ab/nsp3 | 370 | S370del | TCA | --- | 12 | 12 | B.1.1.7 | 0.000011 |
ORF1ab/nsp3 | 370 | S370R | TCa | AGa | 8 | 12 | B.1.1.7 | 0.000007 |
ORF1ab/nsp3 | 370 | S370R | TCA | AGG | 4 | 12 | B.1.1.7 | 0.000004 |
ORF1ab/nsp3 | 370 | S370L | tCa | tTa | 12 | 12 | B.1.177.21 | 0.000918 |
ORF1ab/nsp3 | 370 | S370L | tCa | tTa | 12 | 12 | B.1.177.72 | 0.040678 |
ORF1ab/nsp3 | 370 | S370L | tCa | tTa | 11 | 11 | AY.23 | 0.000767 |
ORF1ab/nsp3 | 370 | S370L | tCa | tTa | 11 | 11 | B.1.36 | 0.001605 |
ORF1ab/nsp3 | 370 | S370P | Tca | Cca | 11 | 11 | B.1.617.2 | 0.000041 |
ORF1ab/nsp3 | 370 | S370L | tCa | tTa | 10 | 10 | A.2.5 | 0.00499 |
ORF1ab/nsp3 | 370 | S370S | tcA | tcG | 9 | 10 | AY.44 | 0.000055 |
ORF1ab/nsp3 | 370 | S370S | tcA | tcC | 1 | 10 | AY.44 | 0.000006 |
ORF1ab/nsp3 | 370 | S370L | tCa | tTa | 10 | 10 | AY.46.4 | 0.001645 |
ORF1ab/nsp3 | 370 | S370P | Tca | Cca | 10 | 10 | B.1.1 | 0.000181 |
ORF1ab/nsp3 | 370 | S370L | tCa | tTa | 10 | 10 | B.1.525 | 0.001132 |
ORF1ab/nsp3 | 370 | S370L | tCa | tTa | 10 | 10 | B.1.596 | 0.000871 |
ORF1ab/nsp3 | 370 | S370L | tCa | tTa | 10 | 10 | N.1 | 0.169492 |
ORF1ab/nsp3 | 370 | S370M | TCA | ATG | 9 | 9 | All | 0.000002 |
ORF1ab/nsp3 | 370 | S370S | tcA | tcT | 5 | 9 | AY.25 | 0.00003 |
ORF1ab/nsp3 | 370 | S370S | tcA | tcG | 4 | 9 | AY.25 | 0.000024 |
ORF1ab/nsp3 | 370 | S370L | tCa | tTa | 9 | 9 | B.1.1.528 | 0.043269 |
ORF1ab/nsp3 | 370 | S370L | tCa | tTa | 9 | 9 | B.1.160 | 0.000281 |
ORF1ab/nsp3 | 370 | S370S | tcA | tcC | 9 | 9 | B.1.177.73 | 0.005096 |
ORF1ab/nsp3 | 370 | S370P | Tca | Cca | 9 | 9 | B.1.293 | 0.1125 |
ORF1ab/nsp3 | 370 | S370L | tCa | tTa | 9 | 9 | C.36 | 0.008197 |
ORF1ab/nsp3 | 370 | S370del1 | tCa | t-a | 9 | 9 | P.1 | 0.000142 |
ORF1ab/nsp3 | 370 | S370L | tCa | tTa | 8 | 8 | AY.110 | 0.000902 |
ORF1ab/nsp3 | 370 | S370L | tCa | tTa | 8 | 8 | AY.29 | 0.000126 |
ORF1ab/nsp3 | 370 | S370L | tCa | tTa | 8 | 8 | AY.61 | 0.000838 |
ORF1ab/nsp3 | 370 | S370L | tCa | tTa | 8 | 8 | AY.99.2 | 0.000737 |
ORF1ab/nsp3 | 370 | S370A | Tca | Gca | 8 | 8 | B.1.1 | 0.000145 |
ORF1ab/nsp3 | 370 | S370L | tCa | tTa | 8 | 8 | B.1.1.306 | 0.003507 |
ORF1ab/nsp3 | 370 | S370M | TCA | ATG | 8 | 8 | B.1.1.7 | 0.000007 |
ORF1ab/nsp3 | 370 | S370L | tCa | tTa | 8 | 8 | B.1.369 | 0.002282 |
ORF1ab/nsp3 | 370 | S370V | TCA | GTT | 3 | 7 | All | 0.000001 |
ORF1ab/nsp3 | 370 | S370V | TCA | GTG | 2 | 7 | All | 0 |
ORF1ab/nsp3 | 370 | S370V | TCA | GTC | 2 | 7 | All | 0 |
ORF1ab/nsp3 | 370 | S370L | tCa | tTa | 7 | 7 | AY.39.1 | 0.000277 |
ORF1ab/nsp3 | 370 | S370S | tcA | tcT | 4 | 7 | AY.43 | 0.000018 |
ORF1ab/nsp3 | 370 | S370S | tcA | tcG | 2 | 7 | AY.43 | 0.000009 |
ORF1ab/nsp3 | 370 | S370S | tcA | tcC | 1 | 7 | AY.43 | 0.000004 |
ORF1ab/nsp3 | 370 | S370L | tCa | tTa | 7 | 7 | AY.48 | 0.003256 |
ORF1ab/nsp3 | 370 | S370L | tCa | tTa | 7 | 7 | AZ.2 | 0.005747 |
ORF1ab/nsp3 | 370 | S370P | Tca | Cca | 7 | 7 | B.1 | 0.000064 |
ORF1ab/nsp3 | 370 | S370A | Tca | Gca | 7 | 7 | B.1 | 0.000064 |
ORF1ab/nsp3 | 370 | S370V | TCA | GTT | 3 | 7 | B.1.1.7 | 0.000003 |
ORF1ab/nsp3 | 370 | S370V | TCA | GTC | 2 | 7 | B.1.1.7 | 0.000002 |
ORF1ab/nsp3 | 370 | S370V | TCA | GTG | 2 | 7 | B.1.1.7 | 0.000002 |
ORF1ab/nsp3 | 370 | S370del2 | tCA | t-- | 5 | 6 | All | 0.000001 |
ORF1ab/nsp3 | 370 | S370del2 | TCa | --a | 1 | 6 | All | 0 |
ORF1ab/nsp3 | 370 | S370L | tCa | tTa | 6 | 6 | AY.116.1 | 0.001869 |
ORF1ab/nsp3 | 370 | S370L | tCa | tTa | 6 | 6 | AY.92 | 0.001724 |
ORF1ab/nsp3 | 370 | S370L | tCa | tTa | 6 | 6 | B | 0.000767 |
ORF1ab/nsp3 | 370 | S370S | tcA | tcG | 6 | 6 | B.1.1 | 0.000109 |
ORF1ab/nsp3 | 370 | S370L | tCa | tTa | 6 | 6 | B.1.1.348 | 0.004777 |
ORF1ab/nsp3 | 370 | S370L | tCa | tTa | 6 | 6 | B.1.170 | 0.025862 |
ORF1ab/nsp3 | 370 | S370L | tCa | tTa | 6 | 6 | B.1.177.12 | 0.00091 |
ORF1ab/nsp3 | 370 | S370L | tCa | tTa | 6 | 6 | B.1.399 | 0.011605 |
ORF1ab/nsp3 | 370 | S370L | tCa | tTa | 6 | 6 | B.1.595 | 0.001566 |
ORF1ab/nsp3 | 370 | S370L | tCa | tTa | 6 | 6 | N.4 | 0.025532 |
ORF1ab/nsp3 | 370 | S370del1 | tCa | t-a | 6 | 6 | P.1.14 | 0.000287 |
ORF1ab/nsp3 | 370 | S370W | tCA | tGG | 5 | 5 | All | 0.000001 |
ORF1ab/nsp3 | 370 | S370L | tCa | tTa | 5 | 5 | AY.105 | 0.003215 |
ORF1ab/nsp3 | 370 | S370L | tCa | tTa | 5 | 5 | AY.106 | 0.001674 |
ORF1ab/nsp3 | 370 | S370L | tCa | tTa | 5 | 5 | AY.2 | 0.001781 |
ORF1ab/nsp3 | 370 | S370L | tCa | tTa | 5 | 5 | AY.24 | 0.002155 |
ORF1ab/nsp3 | 370 | S370P | Tca | Cca | 5 | 5 | AY.39 | 0.000124 |
ORF1ab/nsp3 | 370 | S370L | tCa | tTa | 5 | 5 | AY.46.6 | 0.000361 |
ORF1ab/nsp3 | 370 | S370L | tCa | tTa | 5 | 5 | AY.47 | 0.000156 |
ORF1ab/nsp3 | 370 | S370L | tCa | tTa | 5 | 5 | AY.7 | 0.00098 |
ORF1ab/nsp3 | 370 | S370L | tCa | tTa | 5 | 5 | AY.7.2 | 0.002796 |
ORF1ab/nsp3 | 370 | S370L | tCa | tTa | 5 | 5 | AY.9.2 | 0.000184 |
ORF1ab/nsp3 | 370 | S370L | tCa | tTa | 5 | 5 | B.1.1.161 | 0.017668 |
ORF1ab/nsp3 | 370 | S370L | tCa | tTa | 5 | 5 | B.1.1.507 | 0.043478 |
ORF1ab/nsp3 | 370 | S370L | tCa | tTa | 5 | 5 | B.1.1.63 | 0.001929 |
ORF1ab/nsp3 | 370 | S370del | TCA | --- | 5 | 5 | B.1.2 | 0.000044 |
ORF1ab/nsp3 | 370 | S370S | tcA | tcG | 3 | 5 | B.1.2 | 0.000026 |
ORF1ab/nsp3 | 370 | S370S | tcA | tcT | 1 | 5 | B.1.2 | 0.000009 |
ORF1ab/nsp3 | 370 | S370S | tcA | tcC | 1 | 5 | B.1.2 | 0.000009 |
ORF1ab/nsp3 | 370 | S370S | tcA | tcG | 3 | 5 | B.1.617.2 | 0.000011 |
ORF1ab/nsp3 | 370 | S370S | tcA | tcT | 2 | 5 | B.1.617.2 | 0.000008 |
ORF1ab/nsp3 | 370 | S370L | tCa | tTa | 5 | 5 | C.37.1 | 0.013089 |
ORF1ab/nsp3 | 370 | S370S | tcA | tcG | 5 | 5 | P.2 | 0.000933 |
ORF1ab/nsp3 | 370 | S370L | tCa | tTa | 5 | 5 | Q.1 | 0.000632 |
ORF1ab/nsp3 | 370 | S370S | tcA | tcG | 4 | 4 | AY.103 | 0.000025 |
ORF1ab/nsp3 | 370 | S370T | Tca | Aca | 4 | 4 | AY.117 | 0.000338 |
ORF1ab/nsp3 | 370 | S370L | tCa | tTa | 4 | 4 | AY.42 | 0.000161 |
ORF1ab/nsp3 | 370 | S370S | tcA | tcG | 4 | 4 | AY.5 | 0.000083 |
ORF1ab/nsp3 | 370 | S370L | tCa | tTa | 4 | 4 | AY.59 | 0.002119 |
ORF1ab/nsp3 | 370 | S370L | tCa | tTa | 4 | 4 | AY.84 | 0.00175 |
ORF1ab/nsp3 | 370 | S370del | TCA | --- | 4 | 4 | B.1 | 0.000037 |
ORF1ab/nsp3 | 370 | S370L | tCa | tTa | 4 | 4 | B.1.1.231 | 0.012384 |
ORF1ab/nsp3 | 370 | S370L | tCa | tTa | 4 | 4 | B.1.1.317 | 0.001647 |
ORF1ab/nsp3 | 370 | S370L | tCa | tTa | 4 | 4 | B.1.1.326 | 0.007042 |
ORF1ab/nsp3 | 370 | S370W | tCA | tGG | 4 | 4 | B.1.1.7 | 0.000004 |
ORF1ab/nsp3 | 370 | S370L | tCa | tTa | 4 | 4 | B.1.243 | 0.000278 |
ORF1ab/nsp3 | 370 | S370L | tCa | tTa | 4 | 4 | B.1.36.17 | 0.001976 |
ORF1ab/nsp3 | 370 | S370L | tCa | tTa | 4 | 4 | B.1.36.18 | 0.001681 |
ORF1ab/nsp3 | 370 | S370L | tCa | tTa | 4 | 4 | B.1.438.1 | 0.000429 |
ORF1ab/nsp3 | 370 | S370L | tCa | tTa | 4 | 4 | B.1.466.2 | 0.001565 |
ORF1ab/nsp3 | 370 | S370del | TCA | --- | 4 | 4 | B.1.596 | 0.000349 |
ORF1ab/nsp3 | 370 | S370L | tCa | tTa | 4 | 4 | B.1.617.1 | 0.000516 |
ORF1ab/nsp3 | 370 | S370L | tCa | tTa | 4 | 4 | B.40 | 0.001457 |
ORF1ab/nsp3 | 370 | S370S | tcA | tcG | 4 | 4 | C.37 | 0.000464 |
ORF1ab/nsp3 | 370 | S370L | tCa | tTa | 3 | 3 | A | 0.001161 |
ORF1ab/nsp3 | 370 | S370T | Tca | Aca | 3 | 3 | AY.102 | 0.00008 |
ORF1ab/nsp3 | 370 | S370L | tCa | tTa | 3 | 3 | AY.116 | 0.00086 |
ORF1ab/nsp3 | 370 | S370L | tCa | tTa | 3 | 3 | AY.3.1 | 0.000256 |
ORF1ab/nsp3 | 370 | S370L | tCa | tTa | 3 | 3 | AY.45 | 0.000365 |
ORF1ab/nsp3 | 370 | S370A | Tca | Gca | 3 | 3 | AY.47 | 0.000093 |
ORF1ab/nsp3 | 370 | S370L | tCa | tTa | 3 | 3 | AY.65 | 0.001599 |
ORF1ab/nsp3 | 370 | S370L | tCa | tTa | 3 | 3 | B.1.1.220 | 0.005576 |
ORF1ab/nsp3 | 370 | S370S | tcA | tcG | 3 | 3 | B.1.1.28 | 0.000934 |
ORF1ab/nsp3 | 370 | S370L | tCa | tTa | 3 | 3 | B.1.1.37 | 0.000579 |
ORF1ab/nsp3 | 370 | S370L | tCa | tTa | 3 | 3 | B.1.177.7 | 0.000495 |
ORF1ab/nsp3 | 370 | S370L | tCa | tTa | 3 | 3 | B.1.265 | 0.003812 |
ORF1ab/nsp3 | 370 | S370L | tCa | tTa | 3 | 3 | B.1.36.36 | 0.001806 |
ORF1ab/nsp3 | 370 | S370L | tCa | tTa | 3 | 3 | B.1.409 | 0.002344 |
ORF1ab/nsp3 | 370 | S370L | tCa | tTa | 3 | 3 | B.1.433 | 0.009585 |
ORF1ab/nsp3 | 370 | S370del | TCA | --- | 3 | 3 | B.1.526 | 0.000071 |
ORF1ab/nsp3 | 370 | S370L | tCa | tTa | 3 | 3 | B.1.582 | 0.001472 |
ORF1ab/nsp3 | 370 | S370S | tcA | tcG | 3 | 3 | B.1.637 | 0.000219 |
ORF1ab/nsp3 | 370 | S370L | tCa | tTa | 3 | 3 | C.17 | 0.166667 |
ORF1ab/nsp3 | 370 | S370L | tCa | tTa | 3 | 3 | Q.8 | 0.000495 |
ORF1ab/nsp3 | 370 | S370G | TCA | GGT | 1 | 2 | All | 0 |
ORF1ab/nsp3 | 370 | S370G | TCA | GGC | 1 | 2 | All | 0 |
ORF1ab/nsp3 | 370 | S370L | tCa | tTa | 2 | 2 | AY.114 | 0.000462 |
ORF1ab/nsp3 | 370 | S370L | tCa | tTa | 2 | 2 | AY.13 | 0.000322 |
ORF1ab/nsp3 | 370 | S370L | tCa | tTa | 2 | 2 | AY.16.1 | 0.00094 |
ORF1ab/nsp3 | 370 | S370del | TCA | --- | 2 | 2 | AY.16.1 | 0.00094 |
ORF1ab/nsp3 | 370 | S370I | TCA | ATT | 1 | 2 | AY.25 | 0.000006 |
ORF1ab/nsp3 | 370 | S370I | TCa | ATa | 1 | 2 | AY.25 | 0.000006 |
ORF1ab/nsp3 | 370 | S370L | tCa | tTa | 2 | 2 | AY.32 | 0.001065 |
ORF1ab/nsp3 | 370 | S370L | tCa | tTa | 2 | 2 | AY.33 | 0.000134 |
ORF1ab/nsp3 | 370 | S370L | tCa | tTa | 2 | 2 | AY.36 | 0.000296 |
ORF1ab/nsp3 | 370 | S370del2 | tCA | t-- | 1 | 2 | AY.4 | 0.000002 |
ORF1ab/nsp3 | 370 | S370del2 | TCa | --a | 1 | 2 | AY.4 | 0.000002 |
ORF1ab/nsp3 | 370 | S370S | tcA | tcG | 2 | 2 | AY.4.2.1 | 0.000298 |
ORF1ab/nsp3 | 370 | S370L | tCa | tTa | 2 | 2 | AY.4.2.1 | 0.000298 |
ORF1ab/nsp3 | 370 | S370L | tCa | tTa | 2 | 2 | AY.40 | 0.001929 |
ORF1ab/nsp3 | 370 | S370L | tCa | tTa | 2 | 2 | AY.5.3 | 0.000675 |
ORF1ab/nsp3 | 370 | S370L | tCa | tTa | 2 | 2 | AY.57 | 0.001312 |
ORF1ab/nsp3 | 370 | S370S | tcA | tcG | 2 | 2 | AY.61 | 0.00021 |
ORF1ab/nsp3 | 370 | S370L | tCa | tTa | 2 | 2 | AY.74 | 0.000231 |
ORF1ab/nsp3 | 370 | S370L | tCa | tTa | 2 | 2 | AY.9.1 | 0.000167 |
ORF1ab/nsp3 | 370 | S370L | tCa | tTa | 2 | 2 | AY.91 | 0.001461 |
ORF1ab/nsp3 | 370 | S370L | tCa | tTa | 2 | 2 | AY.98 | 0.000158 |
ORF1ab/nsp3 | 370 | S370X | tCa | tAa | 2 | 2 | B.1 | 0.000018 |
ORF1ab/nsp3 | 370 | S370L | tCa | tTa | 2 | 2 | B.1.1.25 | 0.001137 |
ORF1ab/nsp3 | 370 | S370S | tcA | tcG | 2 | 2 | B.1.1.25 | 0.001137 |
ORF1ab/nsp3 | 370 | S370L | tCa | tTa | 2 | 2 | B.1.1.27 | 0.011299 |
ORF1ab/nsp3 | 370 | S370L | tCa | tTa | 2 | 2 | B.1.1.311 | 0.000716 |
ORF1ab/nsp3 | 370 | S370L | tCa | tTa | 2 | 2 | B.1.1.318 | 0.000604 |
ORF1ab/nsp3 | 370 | S370L | tCa | tTa | 2 | 2 | B.1.1.372 | 0.001377 |
ORF1ab/nsp3 | 370 | S370L | tCa | tTa | 2 | 2 | B.1.1.409 | 0.005666 |
ORF1ab/nsp3 | 370 | S370L | tCa | tTa | 2 | 2 | B.1.1.56 | 0.035714 |
ORF1ab/nsp3 | 370 | S370del2 | tCA | t-- | 2 | 2 | B.1.1.7 | 0.000002 |
ORF1ab/nsp3 | 370 | S370A | Tca | Gca | 2 | 2 | B.1.1.7 | 0.000002 |
ORF1ab/nsp3 | 370 | S370del1 | tcA | tc- | 2 | 2 | B.1.1.7 | 0.000002 |
ORF1ab/nsp3 | 370 | S370G | TCA | GGT | 1 | 2 | B.1.1.7 | 0.000001 |
ORF1ab/nsp3 | 370 | S370G | TCA | GGC | 1 | 2 | B.1.1.7 | 0.000001 |
ORF1ab/nsp3 | 370 | S370T | TcA | AcT | 1 | 2 | B.1.1.7 | 0.000001 |
ORF1ab/nsp3 | 370 | S370T | Tca | Aca | 1 | 2 | B.1.1.7 | 0.000001 |
ORF1ab/nsp3 | 370 | S370L | tCa | tTa | 2 | 2 | B.1.110.3 | 0.001437 |
ORF1ab/nsp3 | 370 | S370L | tCa | tTa | 2 | 2 | B.1.177.73 | 0.001133 |
ORF1ab/nsp3 | 370 | S370del2 | tCA | t-- | 2 | 2 | B.1.2 | 0.000018 |
ORF1ab/nsp3 | 370 | S370L | tCa | tTa | 2 | 2 | B.1.221 | 0.000142 |
ORF1ab/nsp3 | 370 | S370L | tCa | tTa | 2 | 2 | B.1.234 | 0.000264 |
ORF1ab/nsp3 | 370 | S370S | tcA | tcG | 2 | 2 | B.1.234 | 0.000264 |
ORF1ab/nsp3 | 370 | S370P | Tca | Cca | 2 | 2 | B.1.243 | 0.000139 |
ORF1ab/nsp3 | 370 | S370L | tCa | tTa | 2 | 2 | B.1.258.17 | 0.000208 |
ORF1ab/nsp3 | 370 | S370L | tCa | tTa | 2 | 2 | B.1.324 | 0.00321 |
ORF1ab/nsp3 | 370 | S370S | tcA | tcG | 2 | 2 | B.1.36.8 | 0.002 |
ORF1ab/nsp3 | 370 | S370L | tCa | tTa | 2 | 2 | B.1.375 | 0.001639 |
ORF1ab/nsp3 | 370 | S370del | TCA | --- | 2 | 2 | B.1.429 | 0.000047 |
ORF1ab/nsp3 | 370 | S370L | tCa | tTa | 2 | 2 | B.1.499 | 0.002101 |
ORF1ab/nsp3 | 370 | S370L | tCa | tTa | 2 | 2 | B.1.524 | 0.002813 |
ORF1ab/nsp3 | 370 | S370S | tcA | tcG | 2 | 2 | B.1.526 | 0.000047 |
ORF1ab/nsp3 | 370 | S370L | tCa | tTa | 2 | 2 | B.1.533 | 0.019231 |
ORF1ab/nsp3 | 370 | S370del | TCA | --- | 2 | 2 | B.1.621 | 0.000177 |
ORF1ab/nsp3 | 370 | S370L | tCa | tTa | 2 | 2 | B.1.621.1 | 0.001012 |
ORF1ab/nsp3 | 370 | S370L | tCa | tTa | 2 | 2 | C.4 | 0.02 |
ORF1ab/nsp3 | 370 | S370L | tCa | tTa | 2 | 2 | D.2 | 0.00015 |
ORF1ab/nsp3 | 370 | S370I | TCa | ATa | 1 | 2 | P.1 | 0.000016 |
ORF1ab/nsp3 | 370 | S370I | TCA | ATT | 1 | 2 | P.1 | 0.000016 |
ORF1ab/nsp3 | 370 | S370del | TCA | --- | 2 | 2 | P.1.12 | 0.000968 |
ORF1ab/nsp3 | 370 | S370L | tCa | tTa | 2 | 2 | Q.2 | 0.001227 |
ORF1ab/nsp3 | 370 | S370P | Tca | Cca | 2 | 2 | Q.3 | 0.00029 |
ORF1ab/nsp3 | 370 | S370L | tCa | tTa | 2 | 2 | Z.1 | 0.00578 |
ORF1ab/nsp3 | 370 | S370F | tCA | tTC | 1 | 1 | 0.055556 | |
ORF1ab/nsp3 | 370 | S370L | tCa | tTa | 1 | 1 | 0.055556 | |
ORF1ab/nsp3 | 370 | S370S | tcA | tcC | 1 | 1 | 0.055556 | |
ORF1ab/nsp3 | 370 | S370X | tCa | tAa | 1 | 1 | A | 0.000387 |
ORF1ab/nsp3 | 370 | S370A | Tca | Gca | 1 | 1 | A | 0.000387 |
ORF1ab/nsp3 | 370 | S370L | tCa | tTa | 1 | 1 | A.27 | 0.001656 |
ORF1ab/nsp3 | 370 | S370L | tCa | tTa | 1 | 1 | AE.3 | 0.032258 |
ORF1ab/nsp3 | 370 | S370Q | TCa | CAa | 1 | 1 | All | 0 |
ORF1ab/nsp3 | 370 | S370H | TCA | CAT | 1 | 1 | All | 0 |
ORF1ab/nsp3 | 370 | S370E | TCA | GAG | 1 | 1 | All | 0 |
ORF1ab/nsp3 | 370 | S370D | TCA | GAT | 1 | 1 | All | 0 |
ORF1ab/nsp3 | 370 | S370S | tcA | tcG | 1 | 1 | AY.102 | 0.000027 |
ORF1ab/nsp3 | 370 | S370P | Tca | Cca | 1 | 1 | AY.103 | 0.000006 |
ORF1ab/nsp3 | 370 | S370L | tCa | tTa | 1 | 1 | AY.108 | 0.001103 |
ORF1ab/nsp3 | 370 | S370S | tcA | tcT | 1 | 1 | AY.111 | 0.000183 |
ORF1ab/nsp3 | 370 | S370L | tCa | tTa | 1 | 1 | AY.117 | 0.000085 |
ORF1ab/nsp3 | 370 | S370X | tCa | tAa | 1 | 1 | AY.119 | 0.000035 |
ORF1ab/nsp3 | 370 | S370L | tCa | tTa | 1 | 1 | AY.120.2 | 0.001285 |
ORF1ab/nsp3 | 370 | S370L | tCa | tTa | 1 | 1 | AY.121 | 0.000135 |
ORF1ab/nsp3 | 370 | S370L | tCa | tTa | 1 | 1 | AY.14 | 0.000088 |
ORF1ab/nsp3 | 370 | S370L | tCa | tTa | 1 | 1 | AY.16 | 0.00038 |
ORF1ab/nsp3 | 370 | S370S | tcA | tcC | 1 | 1 | AY.20 | 0.000039 |
ORF1ab/nsp3 | 370 | S370del | TCA | --- | 1 | 1 | AY.23 | 0.00007 |
ORF1ab/nsp3 | 370 | S370X | tCa | tAa | 1 | 1 | AY.25 | 0.000006 |
ORF1ab/nsp3 | 370 | S370N | TCA | AAT | 1 | 1 | AY.25 | 0.000006 |
ORF1ab/nsp3 | 370 | S370del | TCA | --- | 1 | 1 | AY.25 | 0.000006 |
ORF1ab/nsp3 | 370 | S370Y | tCA | tAT | 1 | 1 | AY.25 | 0.000006 |
ORF1ab/nsp3 | 370 | S370F | tCA | tTT | 1 | 1 | AY.25 | 0.000006 |
ORF1ab/nsp3 | 370 | S370K | TCa | AAa | 1 | 1 | AY.25 | 0.000006 |
ORF1ab/nsp3 | 370 | S370L | tCa | tTa | 1 | 1 | AY.27 | 0.000065 |
ORF1ab/nsp3 | 370 | S370L | tCa | tTa | 1 | 1 | AY.29.1 | 0.000221 |
ORF1ab/nsp3 | 370 | S370del | TCA | --- | 1 | 1 | AY.3 | 0.00001 |
ORF1ab/nsp3 | 370 | S370S | tcA | tcG | 1 | 1 | AY.3 | 0.00001 |
ORF1ab/nsp3 | 370 | S370S | tcA | tcG | 1 | 1 | AY.34 | 0.000097 |
ORF1ab/nsp3 | 370 | S370L | tCa | tTa | 1 | 1 | AY.34.1 | 0.00051 |
ORF1ab/nsp3 | 370 | S370L | tCa | tTa | 1 | 1 | AY.37 | 0.000316 |
ORF1ab/nsp3 | 370 | S370S | tcA | tcT | 1 | 1 | AY.39 | 0.000025 |
ORF1ab/nsp3 | 370 | S370del | TCA | --- | 1 | 1 | AY.39 | 0.000025 |
ORF1ab/nsp3 | 370 | S370del1 | tCA | tT- | 1 | 1 | AY.4 | 0.000002 |
ORF1ab/nsp3 | 370 | S370T | Tca | Aca | 1 | 1 | AY.4 | 0.000002 |
ORF1ab/nsp3 | 370 | S370del | TCA | --- | 1 | 1 | AY.4 | 0.000002 |
ORF1ab/nsp3 | 370 | S370P | Tca | Cca | 1 | 1 | AY.4 | 0.000002 |
ORF1ab/nsp3 | 370 | S370A | Tca | Gca | 1 | 1 | AY.4 | 0.000002 |
ORF1ab/nsp3 | 370 | S370S | tcA | tcG | 1 | 1 | AY.4.3 | 0.000842 |
ORF1ab/nsp3 | 370 | S370L | tCa | tTa | 1 | 1 | AY.4.3 | 0.000842 |
ORF1ab/nsp3 | 370 | S370L | tCa | tTa | 1 | 1 | AY.4.5 | 0.000107 |
ORF1ab/nsp3 | 370 | S370P | Tca | Cca | 1 | 1 | AY.42 | 0.00004 |
ORF1ab/nsp3 | 370 | S370del | TCA | --- | 1 | 1 | AY.43 | 0.000004 |
ORF1ab/nsp3 | 370 | S370P | Tca | Cca | 1 | 1 | AY.43 | 0.000004 |
ORF1ab/nsp3 | 370 | S370P | Tca | Cca | 1 | 1 | AY.46.1 | 0.001027 |
ORF1ab/nsp3 | 370 | S370P | Tca | Cca | 1 | 1 | AY.46.2 | 0.000635 |
ORF1ab/nsp3 | 370 | S370L | tCa | tTa | 1 | 1 | AY.46.5 | 0.000198 |
ORF1ab/nsp3 | 370 | S370X | tCa | tAa | 1 | 1 | AY.52 | 0.000814 |
ORF1ab/nsp3 | 370 | S370L | tCa | tTa | 1 | 1 | AY.53 | 0.000288 |
ORF1ab/nsp3 | 370 | S370L | tCa | tTa | 1 | 1 | AY.6 | 0.000041 |
ORF1ab/nsp3 | 370 | S370L | tCa | tTa | 1 | 1 | AY.62 | 0.000436 |
ORF1ab/nsp3 | 370 | S370L | tCa | tTa | 1 | 1 | AY.63 | 0.000387 |
ORF1ab/nsp3 | 370 | S370L | tCa | tTa | 1 | 1 | AY.64 | 0.000595 |
ORF1ab/nsp3 | 370 | S370S | tcA | tcG | 1 | 1 | AY.68 | 0.000274 |
ORF1ab/nsp3 | 370 | S370S | tcA | tcG | 1 | 1 | AY.7.1 | 0.000113 |
ORF1ab/nsp3 | 370 | S370del | TCA | --- | 1 | 1 | AY.75.1 | 0.00018 |
ORF1ab/nsp3 | 370 | S370L | tCa | tTa | 1 | 1 | AY.75.1 | 0.00018 |
ORF1ab/nsp3 | 370 | S370P | Tca | Cca | 1 | 1 | AY.78 | 0.001541 |
ORF1ab/nsp3 | 370 | S370L | tCa | tTa | 1 | 1 | AY.78 | 0.001541 |
ORF1ab/nsp3 | 370 | S370L | tCa | tTa | 1 | 1 | AY.88 | 0.000884 |
ORF1ab/nsp3 | 370 | S370L | tCa | tTa | 1 | 1 | AY.9 | 0.000068 |
ORF1ab/nsp3 | 370 | S370S | tcA | tcG | 1 | 1 | AY.91 | 0.00073 |
ORF1ab/nsp3 | 370 | S370L | tCa | tTa | 1 | 1 | AY.93 | 0.000273 |
ORF1ab/nsp3 | 370 | S370S | tcA | tcG | 1 | 1 | AY.98 | 0.000079 |
ORF1ab/nsp3 | 370 | S370S | tcA | tcC | 1 | 1 | AY.98.1 | 0.000048 |
ORF1ab/nsp3 | 370 | S370L | tCa | tTa | 1 | 1 | AY.99 | 0.001049 |
ORF1ab/nsp3 | 370 | S370L | tCa | tTa | 1 | 1 | AZ.3 | 0.00152 |
ORF1ab/nsp3 | 370 | S370S | tcA | tcC | 1 | 1 | B | 0.000128 |
ORF1ab/nsp3 | 370 | S370T | Tca | Aca | 1 | 1 | B.1 | 0.000009 |
ORF1ab/nsp3 | 370 | S370del1 | tcA | tc- | 1 | 1 | B.1 | 0.000009 |
ORF1ab/nsp3 | 370 | S370C | tCA | tGT | 1 | 1 | B.1 | 0.000009 |
ORF1ab/nsp3 | 370 | S370I | TCA | ATT | 1 | 1 | B.1 | 0.000009 |
ORF1ab/nsp3 | 370 | S370F | tCA | tTT | 1 | 1 | B.1 | 0.000009 |
ORF1ab/nsp3 | 370 | S370del | TCA | --- | 1 | 1 | B.1.1 | 0.000018 |
ORF1ab/nsp3 | 370 | S370T | Tca | Aca | 1 | 1 | B.1.1 | 0.000018 |
ORF1ab/nsp3 | 370 | S370L | tCa | tTa | 1 | 1 | B.1.1.101 | 0.01 |
ORF1ab/nsp3 | 370 | S370L | tCa | tTa | 1 | 1 | B.1.1.153 | 0.001095 |
ORF1ab/nsp3 | 370 | S370A | Tca | Gca | 1 | 1 | B.1.1.157 | 0.000913 |
ORF1ab/nsp3 | 370 | S370L | tCa | tTa | 1 | 1 | B.1.1.163 | 0.007634 |
ORF1ab/nsp3 | 370 | S370del | TCA | --- | 1 | 1 | B.1.1.192 | 0.002309 |
ORF1ab/nsp3 | 370 | S370L | tCa | tTa | 1 | 1 | B.1.1.214 | 0.000055 |
ORF1ab/nsp3 | 370 | S370L | tCa | tTa | 1 | 1 | B.1.1.216 | 0.00089 |
ORF1ab/nsp3 | 370 | S370S | tcA | tcG | 1 | 1 | B.1.1.220 | 0.001859 |
ORF1ab/nsp3 | 370 | S370L | tCa | tTa | 1 | 1 | B.1.1.236 | 0.006897 |
ORF1ab/nsp3 | 370 | S370L | tCa | tTa | 1 | 1 | B.1.1.237 | 0.005405 |
ORF1ab/nsp3 | 370 | S370L | tCa | tTa | 1 | 1 | B.1.1.269 | 0.001353 |
ORF1ab/nsp3 | 370 | S370L | tCa | tTa | 1 | 1 | B.1.1.274 | 0.005051 |
ORF1ab/nsp3 | 370 | S370P | Tca | Cca | 1 | 1 | B.1.1.28 | 0.000311 |
ORF1ab/nsp3 | 370 | S370L | tCa | tTa | 1 | 1 | B.1.1.294 | 0.001266 |
ORF1ab/nsp3 | 370 | S370L | tCa | tTa | 1 | 1 | B.1.1.329 | 0.003846 |
ORF1ab/nsp3 | 370 | S370del | TCA | --- | 1 | 1 | B.1.1.33 | 0.000421 |
ORF1ab/nsp3 | 370 | S370L | tCa | tTa | 1 | 1 | B.1.1.369 | 0.000446 |
ORF1ab/nsp3 | 370 | S370L | tCa | tTa | 1 | 1 | B.1.1.374 | 0.002375 |
ORF1ab/nsp3 | 370 | S370L | tCa | tTa | 1 | 1 | B.1.1.39 | 0.00051 |
ORF1ab/nsp3 | 370 | S370L | tCa | tTa | 1 | 1 | B.1.1.407 | 0.041667 |
ORF1ab/nsp3 | 370 | S370P | Tca | Cca | 1 | 1 | B.1.1.434 | 0.000349 |
ORF1ab/nsp3 | 370 | S370L | tCa | tTa | 1 | 1 | B.1.1.54 | 0.003021 |
ORF1ab/nsp3 | 370 | S370H | TCA | CAT | 1 | 1 | B.1.1.7 | 0.000001 |
ORF1ab/nsp3 | 370 | S370Q | TCa | CAa | 1 | 1 | B.1.1.7 | 0.000001 |
ORF1ab/nsp3 | 370 | S370D | TCA | GAT | 1 | 1 | B.1.1.7 | 0.000001 |
ORF1ab/nsp3 | 370 | S370E | TCA | GAG | 1 | 1 | B.1.1.7 | 0.000001 |
ORF1ab/nsp3 | 370 | S370L | tCa | tTa | 1 | 1 | B.1.1.99 | 0.02381 |
ORF1ab/nsp3 | 370 | S370S | tcA | tcG | 1 | 1 | B.1.110.3 | 0.000718 |
ORF1ab/nsp3 | 370 | S370L | tCa | tTa | 1 | 1 | B.1.111 | 0.001175 |
ORF1ab/nsp3 | 370 | S370S | tcA | tcG | 1 | 1 | B.1.139 | 0.000733 |
ORF1ab/nsp3 | 370 | S370L | tCa | tTa | 1 | 1 | B.1.139 | 0.000733 |
ORF1ab/nsp3 | 370 | S370del | TCA | --- | 1 | 1 | B.1.140 | 0.018868 |
ORF1ab/nsp3 | 370 | S370L | tCa | tTa | 1 | 1 | B.1.147 | 0.000756 |
ORF1ab/nsp3 | 370 | S370T | Tca | Aca | 1 | 1 | B.1.160 | 0.000031 |
ORF1ab/nsp3 | 370 | S370del | TCA | --- | 1 | 1 | B.1.160 | 0.000031 |
ORF1ab/nsp3 | 370 | S370L | tCa | tTa | 1 | 1 | B.1.160.30 | 0.002976 |
ORF1ab/nsp3 | 370 | S370P | Tca | Cca | 1 | 1 | B.1.177 | 0.000013 |
ORF1ab/nsp3 | 370 | S370del | TCA | --- | 1 | 1 | B.1.177 | 0.000013 |
ORF1ab/nsp3 | 370 | S370S | tcA | tcG | 1 | 1 | B.1.177.23 | 0.003236 |
ORF1ab/nsp3 | 370 | S370S | tcA | tcT | 1 | 1 | B.1.177.4 | 0.000211 |
ORF1ab/nsp3 | 370 | S370L | tCa | tTa | 1 | 1 | B.1.177.4 | 0.000211 |
ORF1ab/nsp3 | 370 | S370L | tCa | tTa | 1 | 1 | B.1.177.41 | 0.0025 |
ORF1ab/nsp3 | 370 | S370L | tCa | tTa | 1 | 1 | B.1.177.51 | 0.004566 |
ORF1ab/nsp3 | 370 | S370L | tCa | tTa | 1 | 1 | B.1.177.55 | 0.002331 |
ORF1ab/nsp3 | 370 | S370L | tCa | tTa | 1 | 1 | B.1.177.57 | 0.000281 |
ORF1ab/nsp3 | 370 | S370L | tCa | tTa | 1 | 1 | B.1.177.60 | 0.000218 |
ORF1ab/nsp3 | 370 | S370del | TCA | --- | 1 | 1 | B.1.177.62 | 0.001192 |
ORF1ab/nsp3 | 370 | S370L | tCa | tTa | 1 | 1 | B.1.177.86 | 0.000183 |
ORF1ab/nsp3 | 370 | S370L | tCa | tTa | 1 | 1 | B.1.177.9 | 0.001332 |
ORF1ab/nsp3 | 370 | S370L | tCa | tTa | 1 | 1 | B.1.179 | 0.003759 |
ORF1ab/nsp3 | 370 | S370A | Tca | Gca | 1 | 1 | B.1.221 | 0.000071 |
ORF1ab/nsp3 | 370 | S370L | tCa | tTa | 1 | 1 | B.1.232 | 0.000537 |
ORF1ab/nsp3 | 370 | S370S | tcA | tcG | 1 | 1 | B.1.243 | 0.00007 |
ORF1ab/nsp3 | 370 | S370L | tCa | tTa | 1 | 1 | B.1.258.16 | 0.001637 |
ORF1ab/nsp3 | 370 | S370A | Tca | Gca | 1 | 1 | B.1.258.17 | 0.000104 |
ORF1ab/nsp3 | 370 | S370L | tCa | tTa | 1 | 1 | B.1.274 | 0.011905 |
ORF1ab/nsp3 | 370 | S370L | tCa | tTa | 1 | 1 | B.1.279 | 0.000514 |
ORF1ab/nsp3 | 370 | S370L | tCa | tTa | 1 | 1 | B.1.280 | 0.007143 |
ORF1ab/nsp3 | 370 | S370X | tCa | tAa | 1 | 1 | B.1.301 | 0.005917 |
ORF1ab/nsp3 | 370 | S370L | tCa | tTa | 1 | 1 | B.1.311 | 0.000275 |
ORF1ab/nsp3 | 370 | S370P | Tca | Cca | 1 | 1 | B.1.311 | 0.000275 |
ORF1ab/nsp3 | 370 | S370L | tCa | tTa | 1 | 1 | B.1.329 | 0.000608 |
ORF1ab/nsp3 | 370 | S370X | tCa | tAa | 1 | 1 | B.1.344 | 0.008197 |
ORF1ab/nsp3 | 370 | S370del | TCA | --- | 1 | 1 | B.1.351 | 0.00003 |
ORF1ab/nsp3 | 370 | S370S | tcA | tcG | 1 | 1 | B.1.351 | 0.00003 |
ORF1ab/nsp3 | 370 | S370L | tCa | tTa | 1 | 1 | B.1.351.3 | 0.000876 |
ORF1ab/nsp3 | 370 | S370L | tCa | tTa | 1 | 1 | B.1.351.5 | 0.0006 |
ORF1ab/nsp3 | 370 | S370L | tCa | tTa | 1 | 1 | B.1.356 | 0.001727 |
ORF1ab/nsp3 | 370 | S370S | tcA | tcG | 1 | 1 | B.1.36.10 | 0.004785 |
ORF1ab/nsp3 | 370 | S370L | tCa | tTa | 1 | 1 | B.1.36.29 | 0.000517 |
ORF1ab/nsp3 | 370 | S370L | tCa | tTa | 1 | 1 | B.1.36.31 | 0.001751 |
ORF1ab/nsp3 | 370 | S370L | tCa | tTa | 1 | 1 | B.1.36.7 | 0.004 |
ORF1ab/nsp3 | 370 | S370L | tCa | tTa | 1 | 1 | B.1.362 | 0.001541 |
ORF1ab/nsp3 | 370 | S370S | tcA | tcG | 1 | 1 | B.1.367 | 0.000792 |
ORF1ab/nsp3 | 370 | S370L | tCa | tTa | 1 | 1 | B.1.367 | 0.000792 |
ORF1ab/nsp3 | 370 | S370L | tCa | tTa | 1 | 1 | B.1.397 | 0.004854 |
ORF1ab/nsp3 | 370 | S370del1 | tcA | tc- | 1 | 1 | B.1.409 | 0.000781 |
ORF1ab/nsp3 | 370 | S370L | tCa | tTa | 1 | 1 | B.1.413 | 0.004255 |
ORF1ab/nsp3 | 370 | S370L | tCa | tTa | 1 | 1 | B.1.428 | 0.00102 |
ORF1ab/nsp3 | 370 | S370S | tcA | tcG | 1 | 1 | B.1.429 | 0.000024 |
ORF1ab/nsp3 | 370 | S370L | tCa | tTa | 1 | 1 | B.1.450 | 0.011364 |
ORF1ab/nsp3 | 370 | S370L | tCa | tTa | 1 | 1 | B.1.456 | 0.003268 |
ORF1ab/nsp3 | 370 | S370del | TCA | --- | 1 | 1 | B.1.524 | 0.001406 |
ORF1ab/nsp3 | 370 | S370del | TCA | --- | 1 | 1 | B.1.525 | 0.000113 |
ORF1ab/nsp3 | 370 | S370L | tCa | tTa | 1 | 1 | B.1.558 | 0.004566 |
ORF1ab/nsp3 | 370 | S370L | tCa | tTa | 1 | 1 | B.1.561 | 0.000397 |
ORF1ab/nsp3 | 370 | S370L | tCa | tTa | 1 | 1 | B.1.564 | 0.000426 |
ORF1ab/nsp3 | 370 | S370L | tCa | tTa | 1 | 1 | B.1.565 | 0.00081 |
ORF1ab/nsp3 | 370 | S370L | tCa | tTa | 1 | 1 | B.1.568 | 0.001111 |
ORF1ab/nsp3 | 370 | S370L | tCa | tTa | 1 | 1 | B.1.575 | 0.000303 |
ORF1ab/nsp3 | 370 | S370L | tCa | tTa | 1 | 1 | B.1.575.1 | 0.002439 |
ORF1ab/nsp3 | 370 | S370C | tCA | tGT | 1 | 1 | B.1.576 | 0.000907 |
ORF1ab/nsp3 | 370 | S370I | TCA | ATT | 1 | 1 | B.1.576 | 0.000907 |
ORF1ab/nsp3 | 370 | S370F | tCA | tTT | 1 | 1 | B.1.576 | 0.000907 |
ORF1ab/nsp3 | 370 | S370S | TCA | AGT | 1 | 1 | B.1.576 | 0.000907 |
ORF1ab/nsp3 | 370 | S370R | TCA | AGG | 1 | 1 | B.1.576 | 0.000907 |
ORF1ab/nsp3 | 370 | S370L | tCA | tTG | 1 | 1 | B.1.576 | 0.000907 |
ORF1ab/nsp3 | 370 | S370M | TCA | ATG | 1 | 1 | B.1.576 | 0.000907 |
ORF1ab/nsp3 | 370 | S370W | tCA | tGG | 1 | 1 | B.1.576 | 0.000907 |
ORF1ab/nsp3 | 370 | S370L | tCa | tTa | 1 | 1 | B.1.590 | 0.004545 |
ORF1ab/nsp3 | 370 | S370del | TCA | --- | 1 | 1 | B.1.595 | 0.000261 |
ORF1ab/nsp3 | 370 | S370L | tCa | tTa | 1 | 1 | B.1.595.2 | 0.04 |
ORF1ab/nsp3 | 370 | S370P | Tca | Cca | 1 | 1 | B.1.596 | 0.000087 |
ORF1ab/nsp3 | 370 | S370A | Tca | Gca | 1 | 1 | B.1.596 | 0.000087 |
ORF1ab/nsp3 | 370 | S370P | Tca | Cca | 1 | 1 | B.1.609 | 0.000479 |
ORF1ab/nsp3 | 370 | S370L | tCa | tTa | 1 | 1 | B.1.610 | 0.003546 |
ORF1ab/nsp3 | 370 | S370del | TCA | --- | 1 | 1 | B.1.617.2 | 0.000004 |
ORF1ab/nsp3 | 370 | S370L | tCa | tTa | 1 | 1 | B.1.620 | 0.000946 |
ORF1ab/nsp3 | 370 | S370L | tCa | tTa | 1 | 1 | B.1.623 | 0.000536 |
ORF1ab/nsp3 | 370 | S370S | tcA | tcT | 1 | 1 | B.1.628 | 0.000352 |
ORF1ab/nsp3 | 370 | S370L | tCa | tTa | 1 | 1 | B.1.636 | 0.006711 |
ORF1ab/nsp3 | 370 | S370L | tCa | tTa | 1 | 1 | B.1.83 | 0.015385 |
ORF1ab/nsp3 | 370 | S370L | tCa | tTa | 1 | 1 | B.10 | 0.008264 |
ORF1ab/nsp3 | 370 | S370L | tCa | tTa | 1 | 1 | B.3 | 0.000831 |
ORF1ab/nsp3 | 370 | S370L | tCa | tTa | 1 | 1 | B.4.7 | 0.010101 |
ORF1ab/nsp3 | 370 | S370S | tcA | tcG | 1 | 1 | B.40 | 0.000364 |
ORF1ab/nsp3 | 370 | S370del | TCA | --- | 1 | 1 | B.57 | 0.015152 |
ORF1ab/nsp3 | 370 | S370L | tCa | tTa | 1 | 1 | C.16 | 0.00106 |
ORF1ab/nsp3 | 370 | S370P | Tca | Cca | 1 | 1 | C.36.3 | 0.000567 |
ORF1ab/nsp3 | 370 | S370S | tcA | tcG | 1 | 1 | D.2 | 0.000075 |
ORF1ab/nsp3 | 370 | S370S | tcA | tcT | 1 | 1 | N.5 | 0.001767 |
ORF1ab/nsp3 | 370 | S370del | TCA | --- | 1 | 1 | N.6 | 0.007092 |
ORF1ab/nsp3 | 370 | S370del | TCA | --- | 1 | 1 | P.1 | 0.000016 |
ORF1ab/nsp3 | 370 | S370Y | tCA | tAT | 1 | 1 | P.1 | 0.000016 |
ORF1ab/nsp3 | 370 | S370X | tCa | tAa | 1 | 1 | P.1 | 0.000016 |
ORF1ab/nsp3 | 370 | S370N | TCA | AAT | 1 | 1 | P.1 | 0.000016 |
ORF1ab/nsp3 | 370 | S370K | TCa | AAa | 1 | 1 | P.1 | 0.000016 |
ORF1ab/nsp3 | 370 | S370F | tCA | tTT | 1 | 1 | P.1 | 0.000016 |
ORF1ab/nsp3 | 370 | S370del1 | tCa | t-a | 1 | 1 | P.1.1 | 0.000318 |
ORF1ab/nsp3 | 370 | S370del1 | tCa | t-a | 1 | 1 | P.1.12 | 0.000484 |
ORF1ab/nsp3 | 370 | S370del1 | tCa | t-a | 1 | 1 | P.1.17 | 0.000162 |
ORF1ab/nsp3 | 370 | S370del1 | tCa | t-a | 1 | 1 | P.1.7 | 0.000319 |
ORF1ab/nsp3 | 370 | S370S | tcA | tcT | 1 | 1 | Q.1 | 0.000126 |
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CoV-GLUE is still in development. CoV-GLUE was originally developed as part of COG-UK by Josh Singer using the GLUE framework at the MRC-University of Glasgow Centre for Virus Research (CVR). In 2021 it was redeveloped by Richard Orton to scale to the millions of genome sequences available. We acknowledge support from the MRC (MC_UU_12014/12), WT (220977/Z/20/Z) and UKRI G2P (MR/W005611/1). Please contact Richard Orton with any queries: Richard.Orton@glasgow.ac.uk
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