CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF1ab/nsp3 : CodonNum = 355

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF1ab/nsp3355V355VV1173VsyngtCgtT680567150.9867743782-3784
ORF1ab/nsp3355V355VV1173VsyngtCgtA6805700.01028663782-3784
ORF1ab/nsp3355V355VV1173VsyngtCgtG6805200.002939023782-3784
ORF1ab/nsp3355V355DV1173DnonsyngTcgAc155115500.9993553782-3784
ORF1ab/nsp3355V355DV1173DnonsyngTCgAT155110.0006447453782-3784
ORF1ab/nsp3355V355IV1173InonsynGtcAtc6626600.9969793782-3784
ORF1ab/nsp3355V355IV1173InonsynGtCAtT66220.003021153782-3784
ORF1ab/nsp3355V355LV1173LnonsynGtcCtc79780.9873423782-3784
ORF1ab/nsp3355V355LV1173LnonsynGtCCtT7910.01265823782-3784
ORF1ab/nsp3355V355AV1173AnonsyngTcgCc78750.9615383782-3784
ORF1ab/nsp3355V355AV1173AnonsyngTCgCT7830.03846153782-3784
ORF1ab/nsp3355V355delV1173deldelGTC---393913782-3784
ORF1ab/nsp3355V355FV1173FnonsynGtcTtc25220.883782-3784
ORF1ab/nsp3355V355FV1173FnonsynGtCTtT2530.123782-3784
ORF1ab/nsp3355V355GV1173GnonsyngTcgGc1170.6363643782-3784
ORF1ab/nsp3355V355GV1173GnonsyngTCgGT1140.3636363782-3784
ORF1ab/nsp3355V355CV1173CnonsynGTCTGT630.53782-3784
ORF1ab/nsp3355V355CV1173CnonsynGTcTGc630.53782-3784
ORF1ab/nsp3355V355SV1173SnonsynGTcAGc620.3333333782-3784
ORF1ab/nsp3355V355SV1173SnonsynGTCAGT620.3333333782-3784
ORF1ab/nsp3355V355SV1173SnonsynGTCTCT610.1666673782-3784
ORF1ab/nsp3355V355SV1173SnonsynGTcTCc610.1666673782-3784
ORF1ab/nsp3355V355RV1173RnonsynGTCCGT210.53782-3784
ORF1ab/nsp3355V355RV1173RnonsynGTcCGc210.53782-3784
ORF1ab/nsp3355V355PV1173PnonsynGTCCCT210.53782-3784
ORF1ab/nsp3355V355PV1173PnonsynGTcCCc210.53782-3784
ORF1ab/nsp3355V355TV1173TnonsynGTCACT210.53782-3784
ORF1ab/nsp3355V355TV1173TnonsynGTcACc210.53782-3784
ORF1ab/nsp3355V355QV1173QnonsynGTCCAA1113782-3784
ORF1ab/nsp3355V355del2V1173del2delgTCg--1113782-3784
ORF1ab/nsp3355V355del1V1173del1delgtCgt-1113782-3784

Details of the mutation no within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF1ab/nsp3355V355VgtCgtT67156805All0.001284
ORF1ab/nsp3355V355VgtCgtA706805All0.000013
ORF1ab/nsp3355V355VgtCgtG206805All0.000004
ORF1ab/nsp3355V355DgTcgAc15501551All0.000296
ORF1ab/nsp3355V355DgTCgAT11551All0
ORF1ab/nsp3355V355VgtCgtT10211021AY.250.006141
ORF1ab/nsp3355V355VgtCgtT905909B.1.1.70.00081
ORF1ab/nsp3355V355VgtCgtG2909B.1.1.70.000002
ORF1ab/nsp3355V355VgtCgtA2909B.1.1.70.000002
ORF1ab/nsp3355V355DgTcgAc819820B.1.4290.01927
ORF1ab/nsp3355V355DgTCgAT1820B.1.4290.000024
ORF1ab/nsp3355V355IGtcAtc660662All0.000126
ORF1ab/nsp3355V355IGtCAtT2662All0
ORF1ab/nsp3355V355IGtcAtc524524B.1.1.70.000469
ORF1ab/nsp3355V355VgtCgtT486488AY.30.004834
ORF1ab/nsp3355V355VgtCgtA2488AY.30.00002
ORF1ab/nsp3355V355VgtCgtT479479B.1.617.20.001804
ORF1ab/nsp3355V355VgtCgtT451454AY.40.000702
ORF1ab/nsp3355V355VgtCgtA3454AY.40.000005
ORF1ab/nsp3355V355VgtCgtT337337B.1.6090.161553
ORF1ab/nsp3355V355VgtCgtT236236B.1.2430.016422
ORF1ab/nsp3355V355DgTcgAc221221B.1.4270.01116
ORF1ab/nsp3355V355DgTcgAc208208B.1.20.001832
ORF1ab/nsp3355V355VgtCgtT184184B.1.10.003338
ORF1ab/nsp3355V355VgtCgtT146157B.1.20.001286
ORF1ab/nsp3355V355VgtCgtA10157B.1.20.000088
ORF1ab/nsp3355V355VgtCgtG1157B.1.20.000009
ORF1ab/nsp3355V355VgtCgtT143144B.10.00131
ORF1ab/nsp3355V355VgtCgtA1144B.10.000009
ORF1ab/nsp3355V355VgtCgtT140142AY.430.00062
ORF1ab/nsp3355V355VgtCgtA1142AY.430.000004
ORF1ab/nsp3355V355VgtCgtG1142AY.430.000004
ORF1ab/nsp3355V355VgtCgtT140140AY.1030.000869
ORF1ab/nsp3355V355VgtCgtT138139AY.50.00285
ORF1ab/nsp3355V355VgtCgtA1139AY.50.000021
ORF1ab/nsp3355V355VgtCgtT122122B.1.1770.001606
ORF1ab/nsp3355V355VgtCgtT9898B.1.3370.547486
ORF1ab/nsp3355V355VgtCgtT9393AY.9.10.007786
ORF1ab/nsp3355V355VgtCgtT8383AY.9.20.003049
ORF1ab/nsp3355V355VgtCgtT8080B.1.1.2630.124611
ORF1ab/nsp3355V355LGtcCtc7879All0.000015
ORF1ab/nsp3355V355LGtCCtT179All0
ORF1ab/nsp3355V355AgTcgCc7578All0.000014
ORF1ab/nsp3355V355AgTCgCT378All0.000001
ORF1ab/nsp3355V355IGtcAtc7676B.1.1600.00237
ORF1ab/nsp3355V355LGtcCtc7272B.1.5410.318584
ORF1ab/nsp3355V355VgtCgtT6363AY.980.004977
ORF1ab/nsp3355V355VgtCgtT5253AY.440.000317
ORF1ab/nsp3355V355VgtCgtG153AY.440.000006
ORF1ab/nsp3355V355VgtCgtT4343B.1.1590.52439
ORF1ab/nsp3355V355VgtCgtT4343B.1.1600.001341
ORF1ab/nsp3355V355VgtCgtT4041B.1.4290.000941
ORF1ab/nsp3355V355VgtCgtA141B.1.4290.000024
ORF1ab/nsp3355V355delGTC---3939All0.000007
ORF1ab/nsp3355V355VgtCgtT3838AY.4.20.000824
ORF1ab/nsp3355V355VgtCgtT3737B.1.1.1890.055976
ORF1ab/nsp3355V355DgTcgAc3737B.1.2430.002575
ORF1ab/nsp3355V355VgtCgtT3636AY.98.10.001744
ORF1ab/nsp3355V355VgtCgtT3031AY.290.000473
ORF1ab/nsp3355V355VgtCgtA131AY.290.000016
ORF1ab/nsp3355V355VgtCgtT3131P.10.000488
ORF1ab/nsp3355V355DgTcgAc3030B.10.000275
ORF1ab/nsp3355V355VgtCgtT2929B.1.177.190.041488
ORF1ab/nsp3355V355VgtCgtA2728B.1.5960.002353
ORF1ab/nsp3355V355VgtCgtT128B.1.5960.000087
ORF1ab/nsp3355V355VgtCgtT2727B.1.3510.000803
ORF1ab/nsp3355V355VgtCgtT2626B.1.1.5190.001032
ORF1ab/nsp3355V355FGtcTtc2225All0.000004
ORF1ab/nsp3355V355FGtCTtT325All0.000001
ORF1ab/nsp3355V355VgtCgtT2424B.1.1.250.013644
ORF1ab/nsp3355V355VgtCgtT2424B.1.258.150.45283
ORF1ab/nsp3355V355DgTcgAc2424B.1.5610.009528
ORF1ab/nsp3355V355VgtCgtT2323AY.5.30.00776
ORF1ab/nsp3355V355DgTcgAc2323B.1.1.5190.000913
ORF1ab/nsp3355V355VgtCgtT1222B.1.438.10.001287
ORF1ab/nsp3355V355VgtCgtG1022B.1.438.10.001073
ORF1ab/nsp3355V355VgtCgtT2222C.370.002553
ORF1ab/nsp3355V355VgtCgtT2021AY.200.000777
ORF1ab/nsp3355V355VgtCgtA121AY.200.000039
ORF1ab/nsp3355V355DgTcgAc2121B.1.3670.01664
ORF1ab/nsp3355V355VgtCgtT2020B.1.1.4640.029455
ORF1ab/nsp3355V355VgtCgtT1919AY.39.10.000753
ORF1ab/nsp3355V355VgtCgtT1818AY.1020.000477
ORF1ab/nsp3355V355VgtCgtT1616AY.4.50.00172
ORF1ab/nsp3355V355VgtCgtT1616B.1.2340.002111
ORF1ab/nsp3355V355AgTcgCc1616B.1.2340.002111
ORF1ab/nsp3355V355VgtCgtT1515AY.3.10.001279
ORF1ab/nsp3355V355DgTcgAc1515B.1.10.000272
ORF1ab/nsp3355V355VgtCgtT1515B.1.1.2220.00306
ORF1ab/nsp3355V355DgTcgAc1515B.1.1.2220.00306
ORF1ab/nsp3355V355VgtCgtT1515B.1.1.4340.005228
ORF1ab/nsp3355V355VgtCgtT1414AY.260.000396
ORF1ab/nsp3355V355VgtCgtT1414AY.390.000346
ORF1ab/nsp3355V355IGtcAtc1414AY.440.000085
ORF1ab/nsp3355V355VgtCgtT1414B.1.3690.003993
ORF1ab/nsp3355V355VgtCgtT1313AY.230.000907
ORF1ab/nsp3355V355VgtCgtT1313B.1.4270.000656
ORF1ab/nsp3355V355VgtCgtT1213D.20.0009
ORF1ab/nsp3355V355VgtCgtA113D.20.000075
ORF1ab/nsp3355V355VgtCgtT1212AY.46.60.000866
ORF1ab/nsp3355V355DgTcgAc1212B.1.1.4160.01086
ORF1ab/nsp3355V355DgTcgAc1212B.1.1260.015306
ORF1ab/nsp3355V355VgtCgtT1212B.1.5950.003132
ORF1ab/nsp3355V355GgTcgGc711All0.000001
ORF1ab/nsp3355V355GgTCgGT411All0.000001
ORF1ab/nsp3355V355AgTcgCc1111B.1.4260.0111
ORF1ab/nsp3355V355VgtCgtT1111B.1.5510.014194
ORF1ab/nsp3355V355VgtCgtT1111P.20.002053
ORF1ab/nsp3355V355VgtCgtT1010AY.420.000402
ORF1ab/nsp3355V355VgtCgtT1010B.1.1.1680.263158
ORF1ab/nsp3355V355VgtCgtT1010B.1.177.210.000765
ORF1ab/nsp3355V355DgTcgAc1010B.1.4040.013021
ORF1ab/nsp3355V355VgtCgtT1010B.1.6210.000885
ORF1ab/nsp3355V355VgtCgtT99AY.1000.000414
ORF1ab/nsp3355V355VgtCgtT99AY.1160.002581
ORF1ab/nsp3355V355VgtCgtT89AY.1190.000282
ORF1ab/nsp3355V355VgtCgtA19AY.1190.000035
ORF1ab/nsp3355V355VgtCgtT99AY.1200.000335
ORF1ab/nsp3355V355VgtCgtT99AY.130.001449
ORF1ab/nsp3355V355VgtCgtT99B.1.1.2160.008014
ORF1ab/nsp3355V355DgTcgAc99B.1.2320.004836
ORF1ab/nsp3355V355DgTcgAc99B.1.2340.001187
ORF1ab/nsp3355V355VgtCgtT99B.1.258.140.008824
ORF1ab/nsp3355V355IGtcAtc680.333333
ORF1ab/nsp3355V355IGtCAtT280.111111
ORF1ab/nsp3355V355IGtcAtc88AY.40.000012
ORF1ab/nsp3355V355VgtCgtT88AY.470.000249
ORF1ab/nsp3355V355VgtCgtT88B.1.1.280.00249
ORF1ab/nsp3355V355VgtCgtT88B.1.258.170.000832
ORF1ab/nsp3355V355VgtCgtT88B.1.5260.000188
ORF1ab/nsp3355V355VgtCgtT88B.1.5750.002427
ORF1ab/nsp3355V355VgtCgtT77A.23.10.00493
ORF1ab/nsp3355V355AgTcgCc77AY.230.000488
ORF1ab/nsp3355V355VgtCgtT77B.1.1.630.002701
ORF1ab/nsp3355V355VgtCgtT77B.1.177.860.001284
ORF1ab/nsp3355V355VgtCgtT77B.1.221.20.028112
ORF1ab/nsp3355V355DgTcgAc77B.1.2410.005682
ORF1ab/nsp3355V355VgtCgtT77B.1.2580.000466
ORF1ab/nsp3355V355VgtCgtA77B.1.36.190.064815
ORF1ab/nsp3355V355VgtCgtT77B.1.466.20.002739
ORF1ab/nsp3355V355GgTCgGT360.166667
ORF1ab/nsp3355V355GgTcgGc360.166667
ORF1ab/nsp3355V355SGTcAGc260.111111
ORF1ab/nsp3355V355SGTCAGT260.111111
ORF1ab/nsp3355V355SGTcTCc160.055556
ORF1ab/nsp3355V355SGTCTCT160.055556
ORF1ab/nsp3355V355CGTcTGc36All0.000001
ORF1ab/nsp3355V355CGTCTGT36All0.000001
ORF1ab/nsp3355V355SGTCAGT26All0
ORF1ab/nsp3355V355SGTcAGc26All0
ORF1ab/nsp3355V355SGTcTCc16All0
ORF1ab/nsp3355V355SGTCTCT16All0
ORF1ab/nsp3355V355VgtCgtT66AY.20.002137
ORF1ab/nsp3355V355VgtCgtT66AY.330.000401
ORF1ab/nsp3355V355VgtCgtT66AY.610.000629
ORF1ab/nsp3355V355VgtCgtT66AY.750.000336
ORF1ab/nsp3355V355AgTcgCc66B.1.1.70.000005
ORF1ab/nsp3355V355DgTcgAc66B.1.1.70.000005
ORF1ab/nsp3355V355VgtCgtT66B.1.110.30.00431
ORF1ab/nsp3355V355VgtCgtT66B.1.4740.011407
ORF1ab/nsp3355V355VgtCgtT66B.1.5460.022222
ORF1ab/nsp3355V355VgtCgtT66B.1.6370.000438
ORF1ab/nsp3355V355VgtCgtT55AY.1130.000712
ORF1ab/nsp3355V355VgtCgtT55AY.450.000608
ORF1ab/nsp3355V355VgtCgtT55AY.840.002187
ORF1ab/nsp3355V355VgtCgtT55AY.920.001436
ORF1ab/nsp3355V355VgtCgtT55B.1.1.4330.007123
ORF1ab/nsp3355V355delGTC---55B.1.1.70.000004
ORF1ab/nsp3355V355VgtCgtT55B.1.1.910.833333
ORF1ab/nsp3355V355delGTC---55B.1.20.000044
ORF1ab/nsp3355V355VgtCgtT55B.1.36.170.00247
ORF1ab/nsp3355V355VgtCgtT55B.1.5640.002129
ORF1ab/nsp3355V355DgTcgAc55B.1.5650.004052
ORF1ab/nsp3355V355VgtCgtT55C.36.30.002836
ORF1ab/nsp3355V355VgtCgtT55N.50.008834
ORF1ab/nsp3355V355LGtcCtc340.166667
ORF1ab/nsp3355V355FGtCTtT240.111111
ORF1ab/nsp3355V355CGTCTGT240.111111
ORF1ab/nsp3355V355CGTcTGc240.111111
ORF1ab/nsp3355V355AgTCgCT240.111111
ORF1ab/nsp3355V355AgTcgCc240.111111
ORF1ab/nsp3355V355FGtcTtc240.111111
ORF1ab/nsp3355V355LGtCCtT140.055556
ORF1ab/nsp3355V355VgtCgtT44AY.270.000259
ORF1ab/nsp3355V355VgtCgtT44AY.340.000388
ORF1ab/nsp3355V355AgTcgCc44AY.40.000006
ORF1ab/nsp3355V355delGTC---44AY.40.000006
ORF1ab/nsp3355V355VgtCgtT44AY.46.40.000658
ORF1ab/nsp3355V355VgtCgtT44AY.60.000165
ORF1ab/nsp3355V355VgtCgtT44AY.810.007968
ORF1ab/nsp3355V355VgtCgtT44AY.90.00027
ORF1ab/nsp3355V355delGTC---44B.10.000037
ORF1ab/nsp3355V355VgtCgtT44B.1.1.2940.005063
ORF1ab/nsp3355V355VgtCgtT44B.1.1.3180.001207
ORF1ab/nsp3355V355DgTcgAc44B.1.1.3350.051948
ORF1ab/nsp3355V355DgTcgAc44B.1.1.4320.005063
ORF1ab/nsp3355V355VgtCgtT44B.1.1040.01476
ORF1ab/nsp3355V355VgtCgtT44B.1.30.010471
ORF1ab/nsp3355V355DgTcgAc44B.1.4000.001716
ORF1ab/nsp3355V355VgtCgtT44B.1.5250.000453
ORF1ab/nsp3355V355DgTcgAc44B.1.5510.005161
ORF1ab/nsp3355V355VgtCgtT44B.1.5770.002749
ORF1ab/nsp3355V355DgTcgAc44B.1.5960.000349
ORF1ab/nsp3355V355IGtcAtc44B.1.617.20.000015
ORF1ab/nsp3355V355VgtCgtT44B.1.6180.016129
ORF1ab/nsp3355V355VgtCgtT44B.1.6280.001409
ORF1ab/nsp3355V355FGtcTtc44D.20.0003
ORF1ab/nsp3355V355VgtCgtT44Q.80.00066
ORF1ab/nsp3355V355VgtCgtT330.166667
ORF1ab/nsp3355V355VgtCgtT33A.10.000846
ORF1ab/nsp3355V355IGtcAtc33AD.20.000657
ORF1ab/nsp3355V355VgtCgtT33AY.1080.003308
ORF1ab/nsp3355V355VgtCgtA33AY.1090.002219
ORF1ab/nsp3355V355AgTcgCc33AY.290.000047
ORF1ab/nsp3355V355VgtCgtT33AY.460.000312
ORF1ab/nsp3355V355VgtCgtT33AY.480.001395
ORF1ab/nsp3355V355AgTcgCc23B.1.10.000036
ORF1ab/nsp3355V355FGtcTtc23B.1.10.000036
ORF1ab/nsp3355V355FGtCTtT13B.1.10.000018
ORF1ab/nsp3355V355AgTCgCT13B.1.10.000018
ORF1ab/nsp3355V355AgTcgCc33B.1.1.1680.078947
ORF1ab/nsp3355V355VgtCgtT33B.1.1.2070.003546
ORF1ab/nsp3355V355VgtCgtT33B.1.1.2320.005445
ORF1ab/nsp3355V355VgtCgtT33B.1.1.2650.009464
ORF1ab/nsp3355V355VgtCgtT33B.1.1.330.001263
ORF1ab/nsp3355V355VgtCgtT33B.1.1.370.000579
ORF1ab/nsp3355V355VgtCgtT33B.1.1.700.001023
ORF1ab/nsp3355V355AgTcgCc33B.1.1600.000094
ORF1ab/nsp3355V355VgtCgtT33B.1.1690.044776
ORF1ab/nsp3355V355VgtCgtT33B.1.177.160.001993
ORF1ab/nsp3355V355VgtCgtT33B.1.177.330.004934
ORF1ab/nsp3355V355VgtCgtA33B.1.177.820.001432
ORF1ab/nsp3355V355DgTcgAc33B.1.3110.000824
ORF1ab/nsp3355V355DgTcgAc33B.1.3240.004815
ORF1ab/nsp3355V355VgtCgtT33B.1.3260.022727
ORF1ab/nsp3355V355DgTcgAc33B.1.5880.00273
ORF1ab/nsp3355V355DgTcgAc33B.1.5950.000783
ORF1ab/nsp3355V355DgTcgAc33B.1.6090.001438
ORF1ab/nsp3355V355VgtCgtT33B.1.617.10.000387
ORF1ab/nsp3355V355VgtCgtT33B.40.006623
ORF1ab/nsp3355V355VgtCgtT33N.40.012766
ORF1ab/nsp3355V355VgtCgtT33P.1.140.000143
ORF1ab/nsp3355V355VgtCgtT33P.1.150.000697
ORF1ab/nsp3355V355IGtcAtc33P.30.004785
ORF1ab/nsp3355V355TGTCACT120.055556
ORF1ab/nsp3355V355RGTcCGc120.055556
ORF1ab/nsp3355V355PGTcCCc120.055556
ORF1ab/nsp3355V355RGTCCGT120.055556
ORF1ab/nsp3355V355TGTcACc120.055556
ORF1ab/nsp3355V355PGTCCCT120.055556
ORF1ab/nsp3355V355VgtCgtT22AA.80.044444
ORF1ab/nsp3355V355VgtCgtT22AE.80.000978
ORF1ab/nsp3355V355PGTcCCc12All0
ORF1ab/nsp3355V355TGTcACc12All0
ORF1ab/nsp3355V355TGTCACT12All0
ORF1ab/nsp3355V355RGTCCGT12All0
ORF1ab/nsp3355V355RGTcCGc12All0
ORF1ab/nsp3355V355PGTCCCT12All0
ORF1ab/nsp3355V355VgtCgtT22AY.1070.000932
ORF1ab/nsp3355V355VgtCgtT22AY.16.10.00094
ORF1ab/nsp3355V355FGtcTtc22AY.30.00002
ORF1ab/nsp3355V355AgTcgCc22AY.30.00002
ORF1ab/nsp3355V355VgtCgtT22AY.320.001065
ORF1ab/nsp3355V355VgtCgtT22AY.380.000999
ORF1ab/nsp3355V355IGtcAtc22AY.430.000009
ORF1ab/nsp3355V355AgTcgCc22AY.430.000009
ORF1ab/nsp3355V355VgtCgtT22AY.490.00639
ORF1ab/nsp3355V355VgtCgtT22AY.5.40.000553
ORF1ab/nsp3355V355VgtCgtT22AY.540.000191
ORF1ab/nsp3355V355VgtCgtT22AY.580.001815
ORF1ab/nsp3355V355IGtcAtc22AY.620.000871
ORF1ab/nsp3355V355VgtCgtT22AY.910.001461
ORF1ab/nsp3355V355VgtCgtT22B0.000256
ORF1ab/nsp3355V355GgTCgGT12B.1.10.000018
ORF1ab/nsp3355V355CGTcTGc12B.1.10.000018
ORF1ab/nsp3355V355CGTCTGT12B.1.10.000018
ORF1ab/nsp3355V355GgTcgGc12B.1.10.000018
ORF1ab/nsp3355V355VgtCgtT22B.1.1.1980.002937
ORF1ab/nsp3355V355DgTcgAc22B.1.1.2050.007435
ORF1ab/nsp3355V355DgTcgAc22B.1.1.2070.002364
ORF1ab/nsp3355V355VgtCgtT22B.1.1.2140.000111
ORF1ab/nsp3355V355VgtCgtT22B.1.1.2300.018349
ORF1ab/nsp3355V355VgtCgtT22B.1.1.2430.008163
ORF1ab/nsp3355V355VgtCgtT22B.1.1.3030.005525
ORF1ab/nsp3355V355VgtCgtT22B.1.1.3060.000877
ORF1ab/nsp3355V355DgTcgAc22B.1.1.3580.068966
ORF1ab/nsp3355V355VgtCgtT22B.1.1.3640.133333
ORF1ab/nsp3355V355VgtCgtA22B.1.1.390.001019
ORF1ab/nsp3355V355DgTcgAc22B.1.1.5180.012658
ORF1ab/nsp3355V355FGtcTtc22B.1.1.70.000002
ORF1ab/nsp3355V355VgtCgtT22B.1.177.600.000437
ORF1ab/nsp3355V355VgtCgtT22B.1.177.650.001331
ORF1ab/nsp3355V355VgtCgtT22B.1.177.760.004988
ORF1ab/nsp3355V355VgtCgtT22B.1.360.000292
ORF1ab/nsp3355V355VgtCgtT22B.1.36.380.003284
ORF1ab/nsp3355V355VgtCgtT22B.1.36.90.006431
ORF1ab/nsp3355V355DgTcgAc22B.1.3690.00057
ORF1ab/nsp3355V355DgTcgAc22B.1.3770.009132
ORF1ab/nsp3355V355VgtCgtT22B.1.4040.002604
ORF1ab/nsp3355V355VgtCgtT22B.1.4280.002041
ORF1ab/nsp3355V355VgtCgtT22B.1.4440.031746
ORF1ab/nsp3355V355IGtcAtc22B.1.4690.00722
ORF1ab/nsp3355V355DgTcgAc22B.1.5170.000854
ORF1ab/nsp3355V355VgtCgtT22B.1.5880.00182
ORF1ab/nsp3355V355delGTC---22B.1.5960.000174
ORF1ab/nsp3355V355delGTC---22B.1.6210.000177
ORF1ab/nsp3355V355VgtCgtT22B.1.9.50.011364
ORF1ab/nsp3355V355delGTC---22P.1.120.000968
ORF1ab/nsp3355V355VgtCgtT22P.1.170.000324
ORF1ab/nsp3355V355AgTcgCc11A.2.40.003367
ORF1ab/nsp3355V355GgTcgGc11A.2.40.003367
ORF1ab/nsp3355V355VgtCgtT11A.2.50.000499
ORF1ab/nsp3355V355DgTcgAc11A.2.50.000499
ORF1ab/nsp3355V355VgtCgtT11A.2.5.20.001572
ORF1ab/nsp3355V355VgtCgtT11A.270.001656
ORF1ab/nsp3355V355VgtCgtT11AA.10.007246
ORF1ab/nsp3355V355del2gTCg--11All0
ORF1ab/nsp3355V355del1gtCgt-11All0
ORF1ab/nsp3355V355QGTCCAA11All0
ORF1ab/nsp3355V355VgtCgtT11AP.10.001502
ORF1ab/nsp3355V355VgtCgtT11AU.10.001266
ORF1ab/nsp3355V355FGtcTtc11AY.1000.000046
ORF1ab/nsp3355V355VgtCgtT11AY.1010.00049
ORF1ab/nsp3355V355FGtcTtc11AY.1030.000006
ORF1ab/nsp3355V355AgTcgCc11AY.1030.000006
ORF1ab/nsp3355V355VgtCgtT11AY.1050.000643
ORF1ab/nsp3355V355VgtCgtT11AY.1060.000335
ORF1ab/nsp3355V355VgtCgtT11AY.1110.000183
ORF1ab/nsp3355V355VgtCgtT11AY.1140.000231
ORF1ab/nsp3355V355VgtCgtT11AY.1170.000085
ORF1ab/nsp3355V355VgtCgtT11AY.1180.000063
ORF1ab/nsp3355V355VgtCgtT11AY.1210.000135
ORF1ab/nsp3355V355AgTcgCc11AY.160.00038
ORF1ab/nsp3355V355VgtCgtT11AY.190.00114
ORF1ab/nsp3355V355IGtcAtc11AY.20.000356
ORF1ab/nsp3355V355AgTcgCc11AY.200.000039
ORF1ab/nsp3355V355IGtcAtc11AY.230.00007
ORF1ab/nsp3355V355VgtCgtT11AY.23.10.000417
ORF1ab/nsp3355V355FGtcTtc11AY.240.000431
ORF1ab/nsp3355V355FGtcTtc11AY.250.000006
ORF1ab/nsp3355V355IGtcAtc11AY.250.000006
ORF1ab/nsp3355V355AgTcgCc11AY.250.000006
ORF1ab/nsp3355V355GgTcgGc11AY.250.000006
ORF1ab/nsp3355V355VgtCgtT11AY.34.10.00051
ORF1ab/nsp3355V355FGtcTtc11AY.34.10.00051
ORF1ab/nsp3355V355VgtCgtT11AY.350.000233
ORF1ab/nsp3355V355VgtCgtT11AY.360.000148
ORF1ab/nsp3355V355VgtCgtT11AY.39.1.10.000725
ORF1ab/nsp3355V355VgtCgtT11AY.39.20.001541
ORF1ab/nsp3355V355VgtCgtT11AY.4.40.000409
ORF1ab/nsp3355V355delGTC---11AY.4.50.000107
ORF1ab/nsp3355V355delGTC---11AY.430.000004
ORF1ab/nsp3355V355DgTcgAc11AY.430.000004
ORF1ab/nsp3355V355LGtcCtc11AY.430.000004
ORF1ab/nsp3355V355AgTcgCc11AY.440.000006
ORF1ab/nsp3355V355VgtCgtT11AY.46.10.001027
ORF1ab/nsp3355V355VgtCgtT11AY.46.50.000198
ORF1ab/nsp3355V355FGtcTtc11AY.46.60.000072
ORF1ab/nsp3355V355IGtcAtc11AY.50.000021
ORF1ab/nsp3355V355VgtCgtT11AY.520.000814
ORF1ab/nsp3355V355VgtCgtT11AY.530.000288
ORF1ab/nsp3355V355VgtCgtT11AY.570.000656
ORF1ab/nsp3355V355VgtCgtT11AY.590.00053
ORF1ab/nsp3355V355VgtCgtT11AY.630.000387
ORF1ab/nsp3355V355VgtCgtT11AY.700.000209
ORF1ab/nsp3355V355IGtcAtc11AY.710.000475
ORF1ab/nsp3355V355VgtCgtG11AY.710.000475
ORF1ab/nsp3355V355IGtcAtc11AY.730.000665
ORF1ab/nsp3355V355VgtCgtT11AY.75.10.00018
ORF1ab/nsp3355V355IGtcAtc11AY.780.001541
ORF1ab/nsp3355V355VgtCgtT11AY.80.000606
ORF1ab/nsp3355V355IGtcAtc11AY.840.000437
ORF1ab/nsp3355V355VgtCgtT11AY.870.000833
ORF1ab/nsp3355V355FGtcTtc11AY.9.10.000084
ORF1ab/nsp3355V355VgtCgtT11AY.900.000684
ORF1ab/nsp3355V355VgtCgtT11AY.930.000273
ORF1ab/nsp3355V355VgtCgtT11AY.950.000761
ORF1ab/nsp3355V355VgtCgtT11AZ.20.000821
ORF1ab/nsp3355V355IGtcAtc11B0.000128
ORF1ab/nsp3355V355del1gtCgt-11B.10.000009
ORF1ab/nsp3355V355IGtcAtc11B.10.000009
ORF1ab/nsp3355V355delGTC---11B.1.10.000018
ORF1ab/nsp3355V355VgtCgtT11B.1.1.10.000327
ORF1ab/nsp3355V355VgtCgtT11B.1.1.1410.002012
ORF1ab/nsp3355V355VgtCgtT11B.1.1.1760.000439
ORF1ab/nsp3355V355VgtCgtG11B.1.1.1770.019231
ORF1ab/nsp3355V355VgtCgtT11B.1.1.2040.00304
ORF1ab/nsp3355V355AgTcgCc11B.1.1.2140.000055
ORF1ab/nsp3355V355VgtCgtT11B.1.1.2200.001859
ORF1ab/nsp3355V355VgtCgtT11B.1.1.2580.003257
ORF1ab/nsp3355V355FGtcTtc11B.1.1.2770.000759
ORF1ab/nsp3355V355DgTcgAc11B.1.1.3160.000925
ORF1ab/nsp3355V355VgtCgtT11B.1.1.3160.000925
ORF1ab/nsp3355V355DgTcgAc11B.1.1.3220.008772
ORF1ab/nsp3355V355delGTC---11B.1.1.330.000421
ORF1ab/nsp3355V355VgtCgtT11B.1.1.3510.002793
ORF1ab/nsp3355V355VgtCgtT11B.1.1.3720.000689
ORF1ab/nsp3355V355DgTcgAc11B.1.1.3800.009804
ORF1ab/nsp3355V355VgtCgtT11B.1.1.3980.003226
ORF1ab/nsp3355V355VgtCgtA11B.1.1.4090.002833
ORF1ab/nsp3355V355VgtCgtT11B.1.1.4120.007634
ORF1ab/nsp3355V355DgTcgAc11B.1.1.4180.022727
ORF1ab/nsp3355V355DgTcgAc11B.1.1.4340.000349
ORF1ab/nsp3355V355VgtCgtT11B.1.1.470.005348
ORF1ab/nsp3355V355VgtCgtT11B.1.1.510.001718
ORF1ab/nsp3355V355DgTcgAc11B.1.1.5170.006803
ORF1ab/nsp3355V355VgtCgtT11B.1.1.5230.001563
ORF1ab/nsp3355V355FGtcTtc11B.1.1.610.008772
ORF1ab/nsp3355V355del2gTCg--11B.1.1.70.000001
ORF1ab/nsp3355V355VgtCgtT11B.1.1.710.006061
ORF1ab/nsp3355V355delGTC---11B.1.1600.000031
ORF1ab/nsp3355V355VgtCgtT11B.1.160.160.000929
ORF1ab/nsp3355V355VgtCgtT11B.1.1700.00431
ORF1ab/nsp3355V355AgTcgCc11B.1.1770.000013
ORF1ab/nsp3355V355VgtCgtT11B.1.177.100.000878
ORF1ab/nsp3355V355DgTcgAc11B.1.177.210.000076
ORF1ab/nsp3355V355FGtcTtc11B.1.177.210.000076
ORF1ab/nsp3355V355VgtCgtT11B.1.177.40.000211
ORF1ab/nsp3355V355VgtCgtT11B.1.177.70.000165
ORF1ab/nsp3355V355VgtCgtT11B.1.177.750.001041
ORF1ab/nsp3355V355VgtCgtT11B.1.177.810.000189
ORF1ab/nsp3355V355VgtCgtT11B.1.2010.005682
ORF1ab/nsp3355V355DgTcgAc11B.1.2030.0625
ORF1ab/nsp3355V355VgtCgtT11B.1.2060.000816
ORF1ab/nsp3355V355VgtCgtT11B.1.2100.002132
ORF1ab/nsp3355V355delGTC---11B.1.2180.005155
ORF1ab/nsp3355V355VgtCgtT11B.1.2210.000071
ORF1ab/nsp3355V355DgTcgAc11B.1.2390.001221
ORF1ab/nsp3355V355IGtcAtc11B.1.2430.00007
ORF1ab/nsp3355V355VgtCgtT11B.1.2520.006623
ORF1ab/nsp3355V355QGTCCAA11B.1.258.170.000104
ORF1ab/nsp3355V355VgtCgtG11B.1.3200.001245
ORF1ab/nsp3355V355VgtCgtT11B.1.3360.002439
ORF1ab/nsp3355V355VgtCgtT11B.1.351.20.000303
ORF1ab/nsp3355V355delGTC---11B.1.360.000146
ORF1ab/nsp3355V355AgTcgCc11B.1.360.000146
ORF1ab/nsp3355V355VgtCgtT11B.1.36.10.00114
ORF1ab/nsp3355V355IGtcAtc11B.1.36.180.00042
ORF1ab/nsp3355V355DgTcgAc11B.1.36.80.001
ORF1ab/nsp3355V355AgTcgCc11B.1.3830.009009
ORF1ab/nsp3355V355VgtCgtT11B.1.3890.001002
ORF1ab/nsp3355V355DgTcgAc11B.1.3960.000706
ORF1ab/nsp3355V355DgTcgAc11B.1.3990.001934
ORF1ab/nsp3355V355VgtCgtT11B.1.4000.000429
ORF1ab/nsp3355V355DgTcgAc11B.1.4030.003268
ORF1ab/nsp3355V355DgTcgAc11B.1.4090.000781
ORF1ab/nsp3355V355IGtcAtc11B.1.4270.00005
ORF1ab/nsp3355V355delGTC---11B.1.4290.000024
ORF1ab/nsp3355V355IGtcAtc11B.1.438.10.000107
ORF1ab/nsp3355V355VgtCgtT11B.1.4530.003236
ORF1ab/nsp3355V355VgtCgtA11B.1.4560.003268
ORF1ab/nsp3355V355VgtCgtT11B.1.4620.007246
ORF1ab/nsp3355V355VgtCgtT11B.1.4700.001404
ORF1ab/nsp3355V355VgtCgtT11B.1.4970.000315
ORF1ab/nsp3355V355IGtcAtc11B.1.5250.000113
ORF1ab/nsp3355V355delGTC---11B.1.5260.000024
ORF1ab/nsp3355V355VgtCgtT11B.1.5600.00463
ORF1ab/nsp3355V355VgtCgtT11B.1.5610.000397
ORF1ab/nsp3355V355DgTcgAc11B.1.5770.000687
ORF1ab/nsp3355V355delGTC---11B.1.5950.000261
ORF1ab/nsp3355V355LGtcCtc11B.1.5960.000087
ORF1ab/nsp3355V355VgtCgtT11B.1.5970.00463
ORF1ab/nsp3355V355delGTC---11B.1.617.20.000004
ORF1ab/nsp3355V355LGtcCtc11B.1.617.20.000004
ORF1ab/nsp3355V355VgtCgtT11B.1.6200.000946
ORF1ab/nsp3355V355VgtCgtT11B.1.621.10.000506
ORF1ab/nsp3355V355VgtCgtT11B.1.6230.000536
ORF1ab/nsp3355V355IGtcAtc11B.1.6280.000352
ORF1ab/nsp3355V355VgtCgtT11B.1.6310.003367
ORF1ab/nsp3355V355VgtCgtT11B.3.10.001658
ORF1ab/nsp3355V355delGTC---11B.4.40.018868
ORF1ab/nsp3355V355delGTC---11B.570.015152
ORF1ab/nsp3355V355VgtCgtT11B.60.00091
ORF1ab/nsp3355V355VgtCgtA11B.6.60.000889
ORF1ab/nsp3355V355VgtCgtT11C.2.10.006667
ORF1ab/nsp3355V355VgtCgtT11C.40.01
ORF1ab/nsp3355V355GgTcgGc11D.20.000075
ORF1ab/nsp3355V355VgtCgtG11N.20.038462
ORF1ab/nsp3355V355delGTC---11N.60.007092
ORF1ab/nsp3355V355AgTcgCc11P.10.000016
ORF1ab/nsp3355V355delGTC---11P.10.000016
ORF1ab/nsp3355V355DgTcgAc11P.10.000016
ORF1ab/nsp3355V355VgtCgtG11P.1.120.000484
ORF1ab/nsp3355V355VgtCgtT11P.1.20.001156
ORF1ab/nsp3355V355VgtCgtT11P.1.60.001946
ORF1ab/nsp3355V355VgtCgtT11P.1.70.000319
ORF1ab/nsp3355V355VgtCgtT11P.40.003802
ORF1ab/nsp3355V355AgTcgCc11P.40.003802
ORF1ab/nsp3355V355AgTcgCc11Q.30.000145
ORF1ab/nsp3355V355AgTcgCc11Q.80.000165