CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF1ab/nsp3 : CodonNum = 342 & Codon = cTt

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF1ab/nsp3342H342LH1160LnonsyncAtcTt38150.3947373743-3745

Details of the mutation no within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF1ab/nsp3342H342LcAtcTt1538All0.000003
ORF1ab/nsp3342H342LcAtcTt223P.10.000032
ORF1ab/nsp3342H342LcAtcTt130.055556
ORF1ab/nsp3342H342LcAtcTt22B.1.2340.000264
ORF1ab/nsp3342H342LcAtcTt22D.20.00015
ORF1ab/nsp3342H342LcAtcTt11AY.1200.000037
ORF1ab/nsp3342H342LcAtcTt11AY.250.000006
ORF1ab/nsp3342H342LcAtcTt11AY.50.000021
ORF1ab/nsp3342H342LcAtcTt11AY.540.000095
ORF1ab/nsp3342H342LcAtcTt11B.10.000009
ORF1ab/nsp3342H342LcAtcTt11B.1.1.70.000001
ORF1ab/nsp3342H342LcAtcTt11B.1.2210.000071
ORF1ab/nsp3342H342LcAtcTt11B.1.30.002618