CoV-GLUE | Mutations | Mutation
Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):
ORF | CodonNum | Mut | ORF1abMut | MutType | RefCodon | MutCodon | AACount | CodonCount | CodonProp | Genome Position |
ORF1ab/nsp3 | 342 | H342Y | H1160Y | nonsyn | Cat | Tat | 7028 | 7027 | 0.999858 | 3743-3745 |
ORF1ab/nsp3 | 342 | H342Y | H1160Y | nonsyn | CaT | TaC | 7028 | 1 | 0.000142288 | 3743-3745 |
ORF1ab/nsp3 | 342 | H342H | H1160H | syn | caT | caC | 1644 | 1644 | 1 | 3743-3745 |
ORF1ab/nsp3 | 342 | H342R | H1160R | nonsyn | cAt | cGt | 203 | 199 | 0.980296 | 3743-3745 |
ORF1ab/nsp3 | 342 | H342R | H1160R | nonsyn | cAT | cGC | 203 | 2 | 0.00985222 | 3743-3745 |
ORF1ab/nsp3 | 342 | H342R | H1160R | nonsyn | CAT | AGG | 203 | 1 | 0.00492611 | 3743-3745 |
ORF1ab/nsp3 | 342 | H342R | H1160R | nonsyn | cAT | cGG | 203 | 1 | 0.00492611 | 3743-3745 |
ORF1ab/nsp3 | 342 | H342del | H1160del | del | CAT | --- | 103 | 103 | 1 | 3743-3745 |
ORF1ab/nsp3 | 342 | H342Q | H1160Q | nonsyn | caT | caG | 64 | 45 | 0.703125 | 3743-3745 |
ORF1ab/nsp3 | 342 | H342Q | H1160Q | nonsyn | caT | caA | 64 | 19 | 0.296875 | 3743-3745 |
ORF1ab/nsp3 | 342 | H342L | H1160L | nonsyn | cAt | cTt | 38 | 15 | 0.394737 | 3743-3745 |
ORF1ab/nsp3 | 342 | H342L | H1160L | nonsyn | cAT | cTG | 38 | 14 | 0.368421 | 3743-3745 |
ORF1ab/nsp3 | 342 | H342L | H1160L | nonsyn | cAT | cTC | 38 | 7 | 0.184211 | 3743-3745 |
ORF1ab/nsp3 | 342 | H342L | H1160L | nonsyn | cAT | cTA | 38 | 2 | 0.0526316 | 3743-3745 |
ORF1ab/nsp3 | 342 | H342N | H1160N | nonsyn | Cat | Aat | 17 | 15 | 0.882353 | 3743-3745 |
ORF1ab/nsp3 | 342 | H342P | H1160P | nonsyn | cAt | cCt | 17 | 13 | 0.764706 | 3743-3745 |
ORF1ab/nsp3 | 342 | H342P | H1160P | nonsyn | cAT | cCA | 17 | 2 | 0.117647 | 3743-3745 |
ORF1ab/nsp3 | 342 | H342N | H1160N | nonsyn | CaT | AaC | 17 | 2 | 0.117647 | 3743-3745 |
ORF1ab/nsp3 | 342 | H342P | H1160P | nonsyn | cAT | cCC | 17 | 2 | 0.117647 | 3743-3745 |
ORF1ab/nsp3 | 342 | H342D | H1160D | nonsyn | Cat | Gat | 6 | 5 | 0.833333 | 3743-3745 |
ORF1ab/nsp3 | 342 | H342S | H1160S | nonsyn | CAT | AGC | 6 | 3 | 0.5 | 3743-3745 |
ORF1ab/nsp3 | 342 | H342S | H1160S | nonsyn | CAt | AGt | 6 | 2 | 0.333333 | 3743-3745 |
ORF1ab/nsp3 | 342 | H342S | H1160S | nonsyn | CAt | TCt | 6 | 1 | 0.166667 | 3743-3745 |
ORF1ab/nsp3 | 342 | H342D | H1160D | nonsyn | CaT | GaC | 6 | 1 | 0.166667 | 3743-3745 |
ORF1ab/nsp3 | 342 | H342G | H1160G | nonsyn | CAT | GGG | 5 | 3 | 0.6 | 3743-3745 |
ORF1ab/nsp3 | 342 | H342G | H1160G | nonsyn | CAT | GGC | 5 | 1 | 0.2 | 3743-3745 |
ORF1ab/nsp3 | 342 | H342G | H1160G | nonsyn | CAt | GGt | 5 | 1 | 0.2 | 3743-3745 |
ORF1ab/nsp3 | 342 | H342C | H1160C | nonsyn | CAt | TGt | 4 | 4 | 1 | 3743-3745 |
ORF1ab/nsp3 | 342 | H342E | H1160E | nonsyn | CaT | GaG | 3 | 3 | 1 | 3743-3745 |
ORF1ab/nsp3 | 342 | H342T | H1160T | nonsyn | CAt | ACt | 3 | 2 | 0.666667 | 3743-3745 |
ORF1ab/nsp3 | 342 | H342T | H1160T | nonsyn | CAT | ACC | 3 | 1 | 0.333333 | 3743-3745 |
ORF1ab/nsp3 | 342 | H342M | H1160M | nonsyn | CAT | ATG | 2 | 2 | 1 | 3743-3745 |
ORF1ab/nsp3 | 342 | H342del2 | H1160del2 | del | cAT | c-- | 1 | 1 | 1 | 3743-3745 |
ORF1ab/nsp3 | 342 | H342del1 | H1160del1 | del | caT | ca- | 1 | 1 | 1 | 3743-3745 |
ORF1ab/nsp3 | 342 | H342K | H1160K | nonsyn | CaT | AaG | 1 | 1 | 1 | 3743-3745 |
ORF1ab/nsp3 | 342 | H342X | H1160X | nonsyn | CaT | TaA | 1 | 1 | 1 | 3743-3745 |
ORF1ab/nsp3 | 342 | H342F | H1160F | nonsyn | CAt | TTt | 1 | 1 | 1 | 3743-3745 |
ORF1ab/nsp3 | 342 | H342A | H1160A | nonsyn | CAt | GCt | 1 | 1 | 1 | 3743-3745 |
Details of the mutation no within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):
ORF | CodonNum | Mut | RefCodon | MutCodon | CodonCount | AACount | Lineage | LineageCodonProp |
ORF1ab/nsp3 | 342 | H342Y | Cat | Tat | 7027 | 7028 | All | 0.001344 |
ORF1ab/nsp3 | 342 | H342Y | CaT | TaC | 1 | 7028 | All | 0 |
ORF1ab/nsp3 | 342 | H342Y | Cat | Tat | 1758 | 1758 | B.1.1.7 | 0.001574 |
ORF1ab/nsp3 | 342 | H342H | caT | caC | 1644 | 1644 | All | 0.000314 |
ORF1ab/nsp3 | 342 | H342H | caT | caC | 1264 | 1264 | B.1.1.519 | 0.050195 |
ORF1ab/nsp3 | 342 | H342Y | Cat | Tat | 861 | 861 | AY.4 | 0.00134 |
ORF1ab/nsp3 | 342 | H342Y | Cat | Tat | 399 | 399 | AY.103 | 0.002477 |
ORF1ab/nsp3 | 342 | H342Y | Cat | Tat | 320 | 320 | B.1.2 | 0.002818 |
ORF1ab/nsp3 | 342 | H342Y | Cat | Tat | 207 | 207 | B.1.221.4 | 0.8625 |
ORF1ab/nsp3 | 342 | H342R | cAt | cGt | 199 | 203 | All | 0.000038 |
ORF1ab/nsp3 | 342 | H342R | cAT | cGC | 2 | 203 | All | 0 |
ORF1ab/nsp3 | 342 | H342R | CAT | AGG | 1 | 203 | All | 0 |
ORF1ab/nsp3 | 342 | H342R | cAT | cGG | 1 | 203 | All | 0 |
ORF1ab/nsp3 | 342 | H342Y | Cat | Tat | 200 | 200 | B.1.617.2 | 0.000753 |
ORF1ab/nsp3 | 342 | H342Y | Cat | Tat | 189 | 189 | AV.1 | 0.954545 |
ORF1ab/nsp3 | 342 | H342H | caT | caC | 181 | 181 | B.1.1.464 | 0.266568 |
ORF1ab/nsp3 | 342 | H342Y | Cat | Tat | 148 | 148 | B.1.234 | 0.019528 |
ORF1ab/nsp3 | 342 | H342Y | Cat | Tat | 130 | 130 | B.1.1.317 | 0.05352 |
ORF1ab/nsp3 | 342 | H342Y | Cat | Tat | 118 | 118 | B.1.438.1 | 0.012657 |
ORF1ab/nsp3 | 342 | H342Y | Cat | Tat | 113 | 113 | AY.25 | 0.00068 |
ORF1ab/nsp3 | 342 | H342Y | Cat | Tat | 112 | 112 | B.1 | 0.001026 |
ORF1ab/nsp3 | 342 | H342Y | Cat | Tat | 106 | 106 | AY.44 | 0.000645 |
ORF1ab/nsp3 | 342 | H342del | CAT | --- | 103 | 103 | All | 0.00002 |
ORF1ab/nsp3 | 342 | H342Y | Cat | Tat | 100 | 100 | P.1 | 0.001575 |
ORF1ab/nsp3 | 342 | H342Y | Cat | Tat | 95 | 95 | AY.34 | 0.009212 |
ORF1ab/nsp3 | 342 | H342Y | Cat | Tat | 86 | 86 | B.1.177 | 0.001132 |
ORF1ab/nsp3 | 342 | H342Y | Cat | Tat | 75 | 75 | AY.43 | 0.000332 |
ORF1ab/nsp3 | 342 | H342Y | Cat | Tat | 68 | 68 | AY.3 | 0.000676 |
ORF1ab/nsp3 | 342 | H342Y | Cat | Tat | 68 | 68 | AY.4.2.1 | 0.010131 |
ORF1ab/nsp3 | 342 | H342Q | caT | caG | 45 | 64 | All | 0.000009 |
ORF1ab/nsp3 | 342 | H342Q | caT | caA | 19 | 64 | All | 0.000004 |
ORF1ab/nsp3 | 342 | H342Y | Cat | Tat | 63 | 63 | B.1.160 | 0.001965 |
ORF1ab/nsp3 | 342 | H342Y | Cat | Tat | 56 | 56 | B.1.561 | 0.022231 |
ORF1ab/nsp3 | 342 | H342Y | Cat | Tat | 55 | 55 | B.1.221 | 0.003907 |
ORF1ab/nsp3 | 342 | H342Y | Cat | Tat | 54 | 54 | B.1.1 | 0.00098 |
ORF1ab/nsp3 | 342 | H342Y | Cat | Tat | 48 | 48 | B.1.343 | 1 |
ORF1ab/nsp3 | 342 | H342Y | Cat | Tat | 45 | 45 | B.1.526 | 0.001058 |
ORF1ab/nsp3 | 342 | H342Y | Cat | Tat | 43 | 43 | B.1.258 | 0.002862 |
ORF1ab/nsp3 | 342 | H342Y | Cat | Tat | 42 | 42 | B.1.427 | 0.002121 |
ORF1ab/nsp3 | 342 | H342Y | Cat | Tat | 42 | 42 | B.1.619 | 0.036585 |
ORF1ab/nsp3 | 342 | H342Y | Cat | Tat | 41 | 41 | AY.39 | 0.001013 |
ORF1ab/nsp3 | 342 | H342H | caT | caC | 39 | 39 | AY.4 | 0.000061 |
ORF1ab/nsp3 | 342 | H342L | cAt | cTt | 15 | 38 | All | 0.000003 |
ORF1ab/nsp3 | 342 | H342L | cAT | cTG | 14 | 38 | All | 0.000003 |
ORF1ab/nsp3 | 342 | H342L | cAT | cTC | 7 | 38 | All | 0.000001 |
ORF1ab/nsp3 | 342 | H342L | cAT | cTA | 2 | 38 | All | 0 |
ORF1ab/nsp3 | 342 | H342R | cAt | cGt | 37 | 37 | B.1.1.420 | 0.037223 |
ORF1ab/nsp3 | 342 | H342R | cAt | cGt | 37 | 37 | B.1.1.7 | 0.000033 |
ORF1ab/nsp3 | 342 | H342Y | Cat | Tat | 34 | 34 | B.1.1.377 | 0.046961 |
ORF1ab/nsp3 | 342 | H342Y | Cat | Tat | 34 | 34 | B.1.177.12 | 0.005158 |
ORF1ab/nsp3 | 342 | H342Y | Cat | Tat | 32 | 32 | AY.100 | 0.001472 |
ORF1ab/nsp3 | 342 | H342Y | Cat | Tat | 32 | 32 | B.1.1.33 | 0.013468 |
ORF1ab/nsp3 | 342 | H342Y | Cat | Tat | 30 | 30 | Q.1 | 0.00379 |
ORF1ab/nsp3 | 342 | H342Y | Cat | Tat | 27 | 28 | B.1.1.519 | 0.001072 |
ORF1ab/nsp3 | 342 | H342Y | CaT | TaC | 1 | 28 | B.1.1.519 | 0.00004 |
ORF1ab/nsp3 | 342 | H342Y | Cat | Tat | 28 | 28 | B.1.429 | 0.000659 |
ORF1ab/nsp3 | 342 | H342Y | Cat | Tat | 27 | 27 | AY.119 | 0.000953 |
ORF1ab/nsp3 | 342 | H342Y | Cat | Tat | 27 | 27 | AY.4.2 | 0.000586 |
ORF1ab/nsp3 | 342 | H342R | cAt | cGt | 26 | 26 | AY.4.5 | 0.002795 |
ORF1ab/nsp3 | 342 | H342Y | Cat | Tat | 26 | 26 | B.1.1.306 | 0.011399 |
ORF1ab/nsp3 | 342 | H342Y | Cat | Tat | 25 | 25 | B.1.351 | 0.000743 |
ORF1ab/nsp3 | 342 | H342Y | Cat | Tat | 23 | 23 | B.1.525 | 0.002603 |
ORF1ab/nsp3 | 342 | H342Y | Cat | Tat | 23 | 23 | B.1.621 | 0.002036 |
ORF1ab/nsp3 | 342 | H342L | cAT | cTG | 14 | 23 | P.1 | 0.000221 |
ORF1ab/nsp3 | 342 | H342L | cAT | cTC | 7 | 23 | P.1 | 0.00011 |
ORF1ab/nsp3 | 342 | H342L | cAt | cTt | 2 | 23 | P.1 | 0.000032 |
ORF1ab/nsp3 | 342 | H342H | caT | caC | 22 | 22 | B.1.1.7 | 0.00002 |
ORF1ab/nsp3 | 342 | H342Y | Cat | Tat | 21 | 21 | B.1.177.53 | 0.050239 |
ORF1ab/nsp3 | 342 | H342Y | Cat | Tat | 20 | 20 | AY.102 | 0.00053 |
ORF1ab/nsp3 | 342 | H342Y | Cat | Tat | 20 | 20 | AY.27 | 0.001294 |
ORF1ab/nsp3 | 342 | H342del | CAT | --- | 19 | 19 | P.1 | 0.000299 |
ORF1ab/nsp3 | 342 | H342Y | Cat | Tat | 19 | 19 | P.1.14 | 0.000908 |
ORF1ab/nsp3 | 342 | H342Y | Cat | Tat | 18 | 18 | AY.95 | 0.013699 |
ORF1ab/nsp3 | 342 | H342H | caT | caC | 18 | 18 | B.1 | 0.000165 |
ORF1ab/nsp3 | 342 | H342Y | Cat | Tat | 18 | 18 | B.1.1.189 | 0.027231 |
ORF1ab/nsp3 | 342 | H342N | Cat | Aat | 15 | 17 | All | 0.000003 |
ORF1ab/nsp3 | 342 | H342P | cAt | cCt | 13 | 17 | All | 0.000002 |
ORF1ab/nsp3 | 342 | H342P | cAT | cCA | 2 | 17 | All | 0 |
ORF1ab/nsp3 | 342 | H342N | CaT | AaC | 2 | 17 | All | 0 |
ORF1ab/nsp3 | 342 | H342P | cAT | cCC | 2 | 17 | All | 0 |
ORF1ab/nsp3 | 342 | H342Y | Cat | Tat | 17 | 17 | B.1.1.214 | 0.000943 |
ORF1ab/nsp3 | 342 | H342del | CAT | --- | 17 | 17 | P.1.15 | 0.00395 |
ORF1ab/nsp3 | 342 | H342Y | Cat | Tat | 16 | 16 | B.1.177.81 | 0.003029 |
ORF1ab/nsp3 | 342 | H342Y | Cat | Tat | 16 | 16 | B.1.324 | 0.025682 |
ORF1ab/nsp3 | 342 | H342H | caT | caC | 15 | 15 | AY.43 | 0.000066 |
ORF1ab/nsp3 | 342 | H342Y | Cat | Tat | 15 | 15 | B.1.126 | 0.019133 |
ORF1ab/nsp3 | 342 | H342Y | Cat | Tat | 15 | 15 | B.1.177.75 | 0.015609 |
ORF1ab/nsp3 | 342 | H342Y | Cat | Tat | 14 | 14 | AY.33 | 0.000935 |
ORF1ab/nsp3 | 342 | H342R | cAt | cGt | 14 | 14 | AY.43 | 0.000062 |
ORF1ab/nsp3 | 342 | H342Y | Cat | Tat | 14 | 14 | B.1.1.176 | 0.006151 |
ORF1ab/nsp3 | 342 | H342Y | Cat | Tat | 14 | 14 | B.1.1.370 | 0.177215 |
ORF1ab/nsp3 | 342 | H342Y | Cat | Tat | 14 | 14 | B.1.243 | 0.000974 |
ORF1ab/nsp3 | 342 | H342Y | Cat | Tat | 13 | 13 | AY.20 | 0.000505 |
ORF1ab/nsp3 | 342 | H342Y | Cat | Tat | 13 | 13 | AY.75 | 0.000728 |
ORF1ab/nsp3 | 342 | H342Y | Cat | Tat | 13 | 13 | AY.99.2 | 0.001198 |
ORF1ab/nsp3 | 342 | H342Y | Cat | Tat | 13 | 13 | B.1.627 | 0.026263 |
ORF1ab/nsp3 | 342 | H342Y | Cat | Tat | 13 | 13 | B.1.628 | 0.004581 |
ORF1ab/nsp3 | 342 | H342H | caT | caC | 13 | 13 | P.1 | 0.000205 |
ORF1ab/nsp3 | 342 | H342Y | Cat | Tat | 12 | 12 | A.2.5 | 0.005988 |
ORF1ab/nsp3 | 342 | H342Y | Cat | Tat | 12 | 12 | AY.118 | 0.000752 |
ORF1ab/nsp3 | 342 | H342Y | Cat | Tat | 12 | 12 | B | 0.001534 |
ORF1ab/nsp3 | 342 | H342Q | caT | caA | 6 | 12 | B.1.1.7 | 0.000005 |
ORF1ab/nsp3 | 342 | H342Q | caT | caG | 6 | 12 | B.1.1.7 | 0.000005 |
ORF1ab/nsp3 | 342 | H342Q | caT | caG | 12 | 12 | P.1 | 0.000189 |
ORF1ab/nsp3 | 342 | H342Y | Cat | Tat | 11 | 11 | AY.120 | 0.000409 |
ORF1ab/nsp3 | 342 | H342Y | Cat | Tat | 11 | 11 | AY.42 | 0.000443 |
ORF1ab/nsp3 | 342 | H342Y | Cat | Tat | 11 | 11 | AY.46.6 | 0.000794 |
ORF1ab/nsp3 | 342 | H342Y | Cat | Tat | 11 | 11 | AY.5 | 0.000227 |
ORF1ab/nsp3 | 342 | H342H | caT | caC | 11 | 11 | B.1.1 | 0.0002 |
ORF1ab/nsp3 | 342 | H342Y | Cat | Tat | 11 | 11 | B.1.1.284 | 0.001181 |
ORF1ab/nsp3 | 342 | H342Y | Cat | Tat | 11 | 11 | B.1.564 | 0.004685 |
ORF1ab/nsp3 | 342 | H342Y | Cat | Tat | 11 | 11 | C.37 | 0.001277 |
ORF1ab/nsp3 | 342 | H342R | cAt | cGt | 10 | 10 | AY.103 | 0.000062 |
ORF1ab/nsp3 | 342 | H342Y | Cat | Tat | 10 | 10 | AY.113 | 0.001424 |
ORF1ab/nsp3 | 342 | H342Y | Cat | Tat | 10 | 10 | AY.65 | 0.00533 |
ORF1ab/nsp3 | 342 | H342Q | caT | caG | 7 | 10 | B.1 | 0.000064 |
ORF1ab/nsp3 | 342 | H342Q | caT | caA | 3 | 10 | B.1 | 0.000027 |
ORF1ab/nsp3 | 342 | H342Y | Cat | Tat | 10 | 10 | B.1.466.2 | 0.003912 |
ORF1ab/nsp3 | 342 | H342Y | Cat | Tat | 10 | 10 | B.1.575 | 0.003034 |
ORF1ab/nsp3 | 342 | H342Y | Cat | Tat | 10 | 10 | B.1.596 | 0.000871 |
ORF1ab/nsp3 | 342 | H342R | cAt | cGt | 10 | 10 | B.1.617.2 | 0.000038 |
ORF1ab/nsp3 | 342 | H342Y | Cat | Tat | 10 | 10 | B.1.626 | 0.057143 |
ORF1ab/nsp3 | 342 | H342del | CAT | --- | 10 | 10 | P.1.12 | 0.00484 |
ORF1ab/nsp3 | 342 | H342Y | Cat | Tat | 9 | 9 | AY.29 | 0.000142 |
ORF1ab/nsp3 | 342 | H342Y | Cat | Tat | 9 | 9 | AY.45 | 0.001095 |
ORF1ab/nsp3 | 342 | H342Y | Cat | Tat | 9 | 9 | AY.47 | 0.00028 |
ORF1ab/nsp3 | 342 | H342Y | Cat | Tat | 9 | 9 | AY.63 | 0.003482 |
ORF1ab/nsp3 | 342 | H342Y | Cat | Tat | 9 | 9 | B.1.1.318 | 0.002716 |
ORF1ab/nsp3 | 342 | H342H | caT | caC | 9 | 9 | B.1.258 | 0.000599 |
ORF1ab/nsp3 | 342 | H342Y | Cat | Tat | 9 | 9 | B.1.470 | 0.01264 |
ORF1ab/nsp3 | 342 | H342Y | Cat | Tat | 9 | 9 | B.1.637 | 0.000658 |
ORF1ab/nsp3 | 342 | H342Y | Cat | Tat | 9 | 9 | Q.4 | 0.004093 |
ORF1ab/nsp3 | 342 | H342Y | Cat | Tat | 8 | 8 | AY.26 | 0.000226 |
ORF1ab/nsp3 | 342 | H342Y | Cat | Tat | 8 | 8 | AY.52 | 0.006515 |
ORF1ab/nsp3 | 342 | H342R | cAt | cGt | 8 | 8 | AY.64 | 0.004762 |
ORF1ab/nsp3 | 342 | H342Y | Cat | Tat | 8 | 8 | AY.99 | 0.008395 |
ORF1ab/nsp3 | 342 | H342del | CAT | --- | 8 | 8 | B.1 | 0.000073 |
ORF1ab/nsp3 | 342 | H342Y | Cat | Tat | 8 | 8 | B.1.1.397 | 0.018018 |
ORF1ab/nsp3 | 342 | H342Y | Cat | Tat | 8 | 8 | B.1.160.23 | 0.038647 |
ORF1ab/nsp3 | 342 | H342Y | Cat | Tat | 8 | 8 | P.1.17 | 0.001294 |
ORF1ab/nsp3 | 342 | H342Y | Cat | Tat | 7 | 7 | AY.23 | 0.000488 |
ORF1ab/nsp3 | 342 | H342Y | Cat | Tat | 7 | 7 | B.1.258.17 | 0.000728 |
ORF1ab/nsp3 | 342 | H342H | caT | caC | 7 | 7 | B.1.617.2 | 0.000026 |
ORF1ab/nsp3 | 342 | H342Y | Cat | Tat | 7 | 7 | P.1.15 | 0.001626 |
ORF1ab/nsp3 | 342 | H342D | Cat | Gat | 5 | 6 | All | 0.000001 |
ORF1ab/nsp3 | 342 | H342S | CAT | AGC | 3 | 6 | All | 0.000001 |
ORF1ab/nsp3 | 342 | H342S | CAt | AGt | 2 | 6 | All | 0 |
ORF1ab/nsp3 | 342 | H342S | CAt | TCt | 1 | 6 | All | 0 |
ORF1ab/nsp3 | 342 | H342D | CaT | GaC | 1 | 6 | All | 0 |
ORF1ab/nsp3 | 342 | H342Y | Cat | Tat | 6 | 6 | AY.3.1 | 0.000512 |
ORF1ab/nsp3 | 342 | H342H | caT | caC | 6 | 6 | AY.44 | 0.000037 |
ORF1ab/nsp3 | 342 | H342P | cAt | cCt | 4 | 6 | B.1 | 0.000037 |
ORF1ab/nsp3 | 342 | H342P | cAT | cCA | 2 | 6 | B.1 | 0.000018 |
ORF1ab/nsp3 | 342 | H342Y | Cat | Tat | 6 | 6 | B.1.1.56 | 0.107143 |
ORF1ab/nsp3 | 342 | H342Y | Cat | Tat | 6 | 6 | B.1.400 | 0.002574 |
ORF1ab/nsp3 | 342 | H342Y | Cat | Tat | 6 | 6 | B.1.416.1 | 0.009375 |
ORF1ab/nsp3 | 342 | H342G | CAT | GGG | 3 | 5 | 0.166667 | |
ORF1ab/nsp3 | 342 | H342R | cAt | cGt | 2 | 5 | 0.111111 | |
ORF1ab/nsp3 | 342 | H342R | CAT | AGG | 1 | 5 | 0.055556 | |
ORF1ab/nsp3 | 342 | H342R | cAT | cGG | 1 | 5 | 0.055556 | |
ORF1ab/nsp3 | 342 | H342G | CAT | GGC | 1 | 5 | 0.055556 | |
ORF1ab/nsp3 | 342 | H342G | CAt | GGt | 1 | 5 | 0.055556 | |
ORF1ab/nsp3 | 342 | H342R | cAT | cGC | 1 | 5 | 0.055556 | |
ORF1ab/nsp3 | 342 | H342Y | Cat | Tat | 5 | 5 | AD.2 | 0.001095 |
ORF1ab/nsp3 | 342 | H342G | CAT | GGG | 3 | 5 | All | 0.000001 |
ORF1ab/nsp3 | 342 | H342G | CAt | GGt | 1 | 5 | All | 0 |
ORF1ab/nsp3 | 342 | H342G | CAT | GGC | 1 | 5 | All | 0 |
ORF1ab/nsp3 | 342 | H342R | cAt | cGt | 5 | 5 | AY.102 | 0.000133 |
ORF1ab/nsp3 | 342 | H342H | caT | caC | 5 | 5 | AY.103 | 0.000031 |
ORF1ab/nsp3 | 342 | H342Y | Cat | Tat | 5 | 5 | AY.116 | 0.001434 |
ORF1ab/nsp3 | 342 | H342H | caT | caC | 5 | 5 | AY.3 | 0.00005 |
ORF1ab/nsp3 | 342 | H342H | caT | caC | 5 | 5 | AY.39 | 0.000124 |
ORF1ab/nsp3 | 342 | H342Q | caT | caG | 5 | 5 | AY.5 | 0.000103 |
ORF1ab/nsp3 | 342 | H342Y | Cat | Tat | 5 | 5 | AY.61 | 0.000524 |
ORF1ab/nsp3 | 342 | H342Y | Cat | Tat | 5 | 5 | AY.99.1 | 0.007764 |
ORF1ab/nsp3 | 342 | H342Y | Cat | Tat | 5 | 5 | B.1.1.222 | 0.00102 |
ORF1ab/nsp3 | 342 | H342del | CAT | --- | 5 | 5 | B.1.1.7 | 0.000004 |
ORF1ab/nsp3 | 342 | H342Y | Cat | Tat | 5 | 5 | B.1.177.21 | 0.000382 |
ORF1ab/nsp3 | 342 | H342Y | Cat | Tat | 5 | 5 | B.1.36 | 0.00073 |
ORF1ab/nsp3 | 342 | H342del | CAT | --- | 5 | 5 | B.1.617.2 | 0.000019 |
ORF1ab/nsp3 | 342 | H342Y | Cat | Tat | 5 | 5 | P.1.7 | 0.001596 |
ORF1ab/nsp3 | 342 | H342C | CAt | TGt | 4 | 4 | All | 0.000001 |
ORF1ab/nsp3 | 342 | H342Y | Cat | Tat | 4 | 4 | AY.117 | 0.000338 |
ORF1ab/nsp3 | 342 | H342R | cAt | cGt | 4 | 4 | AY.25 | 0.000024 |
ORF1ab/nsp3 | 342 | H342Y | Cat | Tat | 4 | 4 | AY.39.1 | 0.000158 |
ORF1ab/nsp3 | 342 | H342R | cAt | cGt | 4 | 4 | AY.4 | 0.000006 |
ORF1ab/nsp3 | 342 | H342Y | Cat | Tat | 4 | 4 | AY.5.1 | 0.015038 |
ORF1ab/nsp3 | 342 | H342Y | Cat | Tat | 4 | 4 | AY.55 | 0.00367 |
ORF1ab/nsp3 | 342 | H342Y | Cat | Tat | 4 | 4 | AY.6 | 0.000165 |
ORF1ab/nsp3 | 342 | H342Y | Cat | Tat | 4 | 4 | AY.9 | 0.00027 |
ORF1ab/nsp3 | 342 | H342R | cAt | cGt | 3 | 4 | B.1.1 | 0.000054 |
ORF1ab/nsp3 | 342 | H342R | cAT | cGC | 1 | 4 | B.1.1 | 0.000018 |
ORF1ab/nsp3 | 342 | H342Y | Cat | Tat | 4 | 4 | B.1.1.25 | 0.002274 |
ORF1ab/nsp3 | 342 | H342Y | Cat | Tat | 4 | 4 | B.1.1.28 | 0.001245 |
ORF1ab/nsp3 | 342 | H342H | caT | caC | 4 | 4 | B.1.177 | 0.000053 |
ORF1ab/nsp3 | 342 | H342Y | Cat | Tat | 4 | 4 | B.1.177.62 | 0.004768 |
ORF1ab/nsp3 | 342 | H342Y | Cat | Tat | 4 | 4 | B.1.177.7 | 0.000659 |
ORF1ab/nsp3 | 342 | H342Y | Cat | Tat | 4 | 4 | B.1.351.3 | 0.003506 |
ORF1ab/nsp3 | 342 | H342Y | Cat | Tat | 4 | 4 | B.1.36.8 | 0.004 |
ORF1ab/nsp3 | 342 | H342Y | Cat | Tat | 4 | 4 | B.1.389 | 0.004008 |
ORF1ab/nsp3 | 342 | H342Y | Cat | Tat | 4 | 4 | B.1.617.1 | 0.000516 |
ORF1ab/nsp3 | 342 | H342Y | Cat | Tat | 4 | 4 | Q.3 | 0.00058 |
ORF1ab/nsp3 | 342 | H342Y | Cat | Tat | 4 | 4 | Q.8 | 0.00066 |
ORF1ab/nsp3 | 342 | H342E | CaT | GaG | 3 | 3 | 0.166667 | |
ORF1ab/nsp3 | 342 | H342L | cAT | cTA | 2 | 3 | 0.111111 | |
ORF1ab/nsp3 | 342 | H342Q | caT | caA | 2 | 3 | 0.111111 | |
ORF1ab/nsp3 | 342 | H342L | cAt | cTt | 1 | 3 | 0.055556 | |
ORF1ab/nsp3 | 342 | H342Q | caT | caG | 1 | 3 | 0.055556 | |
ORF1ab/nsp3 | 342 | H342S | CAT | AGC | 1 | 3 | 0.055556 | |
ORF1ab/nsp3 | 342 | H342S | CAt | AGt | 1 | 3 | 0.055556 | |
ORF1ab/nsp3 | 342 | H342S | CAt | TCt | 1 | 3 | 0.055556 | |
ORF1ab/nsp3 | 342 | H342N | Cat | Aat | 3 | 3 | AD.2 | 0.000657 |
ORF1ab/nsp3 | 342 | H342E | CaT | GaG | 3 | 3 | All | 0.000001 |
ORF1ab/nsp3 | 342 | H342T | CAt | ACt | 2 | 3 | All | 0 |
ORF1ab/nsp3 | 342 | H342T | CAT | ACC | 1 | 3 | All | 0 |
ORF1ab/nsp3 | 342 | H342Y | Cat | Tat | 3 | 3 | AU.2 | 0.007264 |
ORF1ab/nsp3 | 342 | H342Y | Cat | Tat | 3 | 3 | AY.35 | 0.000699 |
ORF1ab/nsp3 | 342 | H342Y | Cat | Tat | 3 | 3 | AY.46 | 0.000312 |
ORF1ab/nsp3 | 342 | H342Y | Cat | Tat | 3 | 3 | AY.46.5 | 0.000595 |
ORF1ab/nsp3 | 342 | H342Y | Cat | Tat | 3 | 3 | AY.5.4 | 0.00083 |
ORF1ab/nsp3 | 342 | H342Y | Cat | Tat | 3 | 3 | AY.68 | 0.000821 |
ORF1ab/nsp3 | 342 | H342Y | Cat | Tat | 3 | 3 | AY.75.1 | 0.000541 |
ORF1ab/nsp3 | 342 | H342Y | Cat | Tat | 3 | 3 | AY.9.2 | 0.00011 |
ORF1ab/nsp3 | 342 | H342Y | Cat | Tat | 3 | 3 | AY.92 | 0.000862 |
ORF1ab/nsp3 | 342 | H342Y | Cat | Tat | 3 | 3 | AY.98 | 0.000237 |
ORF1ab/nsp3 | 342 | H342Y | Cat | Tat | 3 | 3 | AY.98.1 | 0.000145 |
ORF1ab/nsp3 | 342 | H342R | cAt | cGt | 3 | 3 | B.1 | 0.000027 |
ORF1ab/nsp3 | 342 | H342Y | Cat | Tat | 3 | 3 | B.1.1.128 | 0.021277 |
ORF1ab/nsp3 | 342 | H342Y | Cat | Tat | 3 | 3 | B.1.1.186 | 0.010309 |
ORF1ab/nsp3 | 342 | H342Y | Cat | Tat | 3 | 3 | B.1.1.521 | 0.016043 |
ORF1ab/nsp3 | 342 | H342Y | Cat | Tat | 3 | 3 | B.1.104 | 0.01107 |
ORF1ab/nsp3 | 342 | H342Y | Cat | Tat | 3 | 3 | B.1.110.3 | 0.002155 |
ORF1ab/nsp3 | 342 | H342Y | Cat | Tat | 3 | 3 | B.1.177.23 | 0.009709 |
ORF1ab/nsp3 | 342 | H342R | cAt | cGt | 3 | 3 | B.1.2 | 0.000026 |
ORF1ab/nsp3 | 342 | H342R | cAt | cGt | 3 | 3 | B.1.234 | 0.000396 |
ORF1ab/nsp3 | 342 | H342R | cAt | cGt | 3 | 3 | B.1.258 | 0.0002 |
ORF1ab/nsp3 | 342 | H342Y | Cat | Tat | 3 | 3 | B.1.265 | 0.003812 |
ORF1ab/nsp3 | 342 | H342Y | Cat | Tat | 3 | 3 | B.1.36.2 | 0.032258 |
ORF1ab/nsp3 | 342 | H342Y | Cat | Tat | 3 | 3 | B.1.36.21 | 0.006479 |
ORF1ab/nsp3 | 342 | H342Y | Cat | Tat | 3 | 3 | B.1.471 | 0.008197 |
ORF1ab/nsp3 | 342 | H342Y | Cat | Tat | 3 | 3 | B.1.621.1 | 0.001517 |
ORF1ab/nsp3 | 342 | H342Y | Cat | Tat | 3 | 3 | D.2 | 0.000225 |
ORF1ab/nsp3 | 342 | H342del | CAT | --- | 3 | 3 | P.1.14 | 0.000143 |
ORF1ab/nsp3 | 342 | H342Y | Cat | Tat | 3 | 3 | P.3 | 0.004785 |
ORF1ab/nsp3 | 342 | H342Y | Cat | Tat | 3 | 3 | R.1 | 0.00027 |
ORF1ab/nsp3 | 342 | H342del | CAT | --- | 2 | 2 | 0.111111 | |
ORF1ab/nsp3 | 342 | H342N | Cat | Aat | 1 | 2 | 0.055556 | |
ORF1ab/nsp3 | 342 | H342N | CaT | AaC | 1 | 2 | 0.055556 | |
ORF1ab/nsp3 | 342 | H342D | Cat | Gat | 1 | 2 | 0.055556 | |
ORF1ab/nsp3 | 342 | H342D | CaT | GaC | 1 | 2 | 0.055556 | |
ORF1ab/nsp3 | 342 | H342Y | Cat | Tat | 2 | 2 | A.21 | 0.00554 |
ORF1ab/nsp3 | 342 | H342M | CAT | ATG | 2 | 2 | All | 0 |
ORF1ab/nsp3 | 342 | H342Q | caT | caG | 2 | 2 | AY.103 | 0.000012 |
ORF1ab/nsp3 | 342 | H342Y | Cat | Tat | 2 | 2 | AY.121 | 0.000271 |
ORF1ab/nsp3 | 342 | H342Y | Cat | Tat | 2 | 2 | AY.19 | 0.002281 |
ORF1ab/nsp3 | 342 | H342N | Cat | Aat | 2 | 2 | AY.3 | 0.00002 |
ORF1ab/nsp3 | 342 | H342R | cAt | cGt | 2 | 2 | AY.3 | 0.00002 |
ORF1ab/nsp3 | 342 | H342Y | Cat | Tat | 2 | 2 | AY.32 | 0.001065 |
ORF1ab/nsp3 | 342 | H342Y | Cat | Tat | 2 | 2 | AY.34.1 | 0.00102 |
ORF1ab/nsp3 | 342 | H342Q | caT | caA | 2 | 2 | AY.4 | 0.000003 |
ORF1ab/nsp3 | 342 | H342del | CAT | --- | 2 | 2 | AY.4 | 0.000003 |
ORF1ab/nsp3 | 342 | H342Y | Cat | Tat | 2 | 2 | AY.4.5 | 0.000215 |
ORF1ab/nsp3 | 342 | H342Y | Cat | Tat | 2 | 2 | AY.46.2 | 0.001271 |
ORF1ab/nsp3 | 342 | H342Y | Cat | Tat | 2 | 2 | AY.54 | 0.000191 |
ORF1ab/nsp3 | 342 | H342H | caT | caC | 2 | 2 | AY.59 | 0.001059 |
ORF1ab/nsp3 | 342 | H342Y | Cat | Tat | 2 | 2 | AY.7 | 0.000392 |
ORF1ab/nsp3 | 342 | H342Y | Cat | Tat | 2 | 2 | AY.74 | 0.000231 |
ORF1ab/nsp3 | 342 | H342Y | Cat | Tat | 2 | 2 | AY.84 | 0.000875 |
ORF1ab/nsp3 | 342 | H342Y | Cat | Tat | 2 | 2 | AY.88 | 0.001768 |
ORF1ab/nsp3 | 342 | H342P | cAt | cCt | 1 | 2 | B.1.1 | 0.000018 |
ORF1ab/nsp3 | 342 | H342N | Cat | Aat | 1 | 2 | B.1.1 | 0.000018 |
ORF1ab/nsp3 | 342 | H342T | CAT | ACC | 1 | 2 | B.1.1 | 0.000018 |
ORF1ab/nsp3 | 342 | H342T | CAt | ACt | 1 | 2 | B.1.1 | 0.000018 |
ORF1ab/nsp3 | 342 | H342S | CAt | AGt | 1 | 2 | B.1.1 | 0.000018 |
ORF1ab/nsp3 | 342 | H342P | cAT | cCC | 1 | 2 | B.1.1 | 0.000018 |
ORF1ab/nsp3 | 342 | H342S | CAT | AGC | 1 | 2 | B.1.1 | 0.000018 |
ORF1ab/nsp3 | 342 | H342N | CaT | AaC | 1 | 2 | B.1.1 | 0.000018 |
ORF1ab/nsp3 | 342 | H342Y | Cat | Tat | 2 | 2 | B.1.1.10 | 0.00223 |
ORF1ab/nsp3 | 342 | H342Y | Cat | Tat | 2 | 2 | B.1.1.157 | 0.001826 |
ORF1ab/nsp3 | 342 | H342H | caT | caC | 2 | 2 | B.1.1.161 | 0.007067 |
ORF1ab/nsp3 | 342 | H342H | caT | caC | 2 | 2 | B.1.1.222 | 0.000408 |
ORF1ab/nsp3 | 342 | H342Y | Cat | Tat | 2 | 2 | B.1.1.244 | 0.030769 |
ORF1ab/nsp3 | 342 | H342Y | Cat | Tat | 2 | 2 | B.1.1.277 | 0.001517 |
ORF1ab/nsp3 | 342 | H342H | caT | caC | 2 | 2 | B.1.1.306 | 0.000877 |
ORF1ab/nsp3 | 342 | H342Y | Cat | Tat | 2 | 2 | B.1.1.311 | 0.000716 |
ORF1ab/nsp3 | 342 | H342Y | Cat | Tat | 2 | 2 | B.1.1.372 | 0.001377 |
ORF1ab/nsp3 | 342 | H342R | cAt | cGt | 2 | 2 | B.1.1.411 | 0.029412 |
ORF1ab/nsp3 | 342 | H342Y | Cat | Tat | 2 | 2 | B.1.1.63 | 0.000772 |
ORF1ab/nsp3 | 342 | H342Y | Cat | Tat | 2 | 2 | B.1.143 | 0.042553 |
ORF1ab/nsp3 | 342 | H342Y | Cat | Tat | 2 | 2 | B.1.177.5 | 0.002484 |
ORF1ab/nsp3 | 342 | H342Y | Cat | Tat | 2 | 2 | B.1.177.60 | 0.000437 |
ORF1ab/nsp3 | 342 | H342Y | Cat | Tat | 2 | 2 | B.1.177.83 | 0.002963 |
ORF1ab/nsp3 | 342 | H342Y | Cat | Tat | 2 | 2 | B.1.177.87 | 0.001456 |
ORF1ab/nsp3 | 342 | H342R | cAt | cGt | 2 | 2 | B.1.210 | 0.004264 |
ORF1ab/nsp3 | 342 | H342L | cAt | cTt | 2 | 2 | B.1.234 | 0.000264 |
ORF1ab/nsp3 | 342 | H342Y | Cat | Tat | 2 | 2 | B.1.240 | 0.000431 |
ORF1ab/nsp3 | 342 | H342Y | Cat | Tat | 2 | 2 | B.1.36.36 | 0.001204 |
ORF1ab/nsp3 | 342 | H342Q | caT | caG | 2 | 2 | B.1.429 | 0.000047 |
ORF1ab/nsp3 | 342 | H342Q | caT | caG | 2 | 2 | B.1.526 | 0.000047 |
ORF1ab/nsp3 | 342 | H342H | caT | caC | 2 | 2 | B.1.526 | 0.000047 |
ORF1ab/nsp3 | 342 | H342Y | Cat | Tat | 2 | 2 | B.1.527 | 0.007407 |
ORF1ab/nsp3 | 342 | H342Y | Cat | Tat | 2 | 2 | B.1.580 | 0.00813 |
ORF1ab/nsp3 | 342 | H342Y | Cat | Tat | 2 | 2 | B.1.595 | 0.000522 |
ORF1ab/nsp3 | 342 | H342H | caT | caC | 2 | 2 | B.1.617.1 | 0.000258 |
ORF1ab/nsp3 | 342 | H342del | CAT | --- | 2 | 2 | B.1.621 | 0.000177 |
ORF1ab/nsp3 | 342 | H342Y | Cat | Tat | 2 | 2 | B.55 | 0.0059 |
ORF1ab/nsp3 | 342 | H342Y | Cat | Tat | 2 | 2 | C.16 | 0.002121 |
ORF1ab/nsp3 | 342 | H342Y | Cat | Tat | 2 | 2 | C.36.3 | 0.001134 |
ORF1ab/nsp3 | 342 | H342L | cAt | cTt | 2 | 2 | D.2 | 0.00015 |
ORF1ab/nsp3 | 342 | H342P | cAt | cCt | 2 | 2 | P.1 | 0.000032 |
ORF1ab/nsp3 | 342 | H342Y | Cat | Tat | 2 | 2 | P.1.1 | 0.000635 |
ORF1ab/nsp3 | 342 | H342Y | Cat | Tat | 2 | 2 | P.1.10 | 0.000539 |
ORF1ab/nsp3 | 342 | H342Q | caT | caG | 2 | 2 | P.1.2 | 0.002312 |
ORF1ab/nsp3 | 342 | H342del | CAT | --- | 2 | 2 | P.1.7 | 0.000639 |
ORF1ab/nsp3 | 342 | H342Y | Cat | Tat | 2 | 2 | P.2 | 0.000373 |
ORF1ab/nsp3 | 342 | H342K | CaT | AaG | 1 | 1 | 0.055556 | |
ORF1ab/nsp3 | 342 | H342Y | Cat | Tat | 1 | 1 | 0.055556 | |
ORF1ab/nsp3 | 342 | H342P | cAt | cCt | 1 | 1 | 0.055556 | |
ORF1ab/nsp3 | 342 | H342C | CAt | TGt | 1 | 1 | 0.055556 | |
ORF1ab/nsp3 | 342 | H342H | caT | caC | 1 | 1 | 0.055556 | |
ORF1ab/nsp3 | 342 | H342Y | Cat | Tat | 1 | 1 | A | 0.000387 |
ORF1ab/nsp3 | 342 | H342Y | Cat | Tat | 1 | 1 | A.1 | 0.000282 |
ORF1ab/nsp3 | 342 | H342Y | Cat | Tat | 1 | 1 | A.27 | 0.001656 |
ORF1ab/nsp3 | 342 | H342Y | Cat | Tat | 1 | 1 | A.29 | 0.005319 |
ORF1ab/nsp3 | 342 | H342X | CaT | TaA | 1 | 1 | All | 0 |
ORF1ab/nsp3 | 342 | H342del1 | caT | ca- | 1 | 1 | All | 0 |
ORF1ab/nsp3 | 342 | H342F | CAt | TTt | 1 | 1 | All | 0 |
ORF1ab/nsp3 | 342 | H342A | CAt | GCt | 1 | 1 | All | 0 |
ORF1ab/nsp3 | 342 | H342K | CaT | AaG | 1 | 1 | All | 0 |
ORF1ab/nsp3 | 342 | H342del2 | cAT | c-- | 1 | 1 | All | 0 |
ORF1ab/nsp3 | 342 | H342R | cAt | cGt | 1 | 1 | AY.100 | 0.000046 |
ORF1ab/nsp3 | 342 | H342Y | Cat | Tat | 1 | 1 | AY.106 | 0.000335 |
ORF1ab/nsp3 | 342 | H342R | cAt | cGt | 1 | 1 | AY.108 | 0.001103 |
ORF1ab/nsp3 | 342 | H342Y | Cat | Tat | 1 | 1 | AY.11 | 0.001339 |
ORF1ab/nsp3 | 342 | H342Y | Cat | Tat | 1 | 1 | AY.110 | 0.000113 |
ORF1ab/nsp3 | 342 | H342del | CAT | --- | 1 | 1 | AY.113 | 0.000142 |
ORF1ab/nsp3 | 342 | H342Q | caT | caG | 1 | 1 | AY.114 | 0.000231 |
ORF1ab/nsp3 | 342 | H342H | caT | caC | 1 | 1 | AY.114 | 0.000231 |
ORF1ab/nsp3 | 342 | H342Y | Cat | Tat | 1 | 1 | AY.114 | 0.000231 |
ORF1ab/nsp3 | 342 | H342Y | Cat | Tat | 1 | 1 | AY.115 | 0.005208 |
ORF1ab/nsp3 | 342 | H342del | CAT | --- | 1 | 1 | AY.119 | 0.000035 |
ORF1ab/nsp3 | 342 | H342Q | caT | caA | 1 | 1 | AY.119 | 0.000035 |
ORF1ab/nsp3 | 342 | H342L | cAt | cTt | 1 | 1 | AY.120 | 0.000037 |
ORF1ab/nsp3 | 342 | H342R | cAt | cGt | 1 | 1 | AY.13 | 0.000161 |
ORF1ab/nsp3 | 342 | H342Y | Cat | Tat | 1 | 1 | AY.14 | 0.000088 |
ORF1ab/nsp3 | 342 | H342Y | Cat | Tat | 1 | 1 | AY.16.1 | 0.00047 |
ORF1ab/nsp3 | 342 | H342del | CAT | --- | 1 | 1 | AY.20 | 0.000039 |
ORF1ab/nsp3 | 342 | H342R | cAt | cGt | 1 | 1 | AY.23 | 0.00007 |
ORF1ab/nsp3 | 342 | H342del | CAT | --- | 1 | 1 | AY.23 | 0.00007 |
ORF1ab/nsp3 | 342 | H342del | CAT | --- | 1 | 1 | AY.24 | 0.000431 |
ORF1ab/nsp3 | 342 | H342del | CAT | --- | 1 | 1 | AY.25 | 0.000006 |
ORF1ab/nsp3 | 342 | H342L | cAt | cTt | 1 | 1 | AY.25 | 0.000006 |
ORF1ab/nsp3 | 342 | H342H | caT | caC | 1 | 1 | AY.25 | 0.000006 |
ORF1ab/nsp3 | 342 | H342del | CAT | --- | 1 | 1 | AY.26 | 0.000028 |
ORF1ab/nsp3 | 342 | H342N | Cat | Aat | 1 | 1 | AY.26 | 0.000028 |
ORF1ab/nsp3 | 342 | H342R | cAt | cGt | 1 | 1 | AY.26 | 0.000028 |
ORF1ab/nsp3 | 342 | H342H | caT | caC | 1 | 1 | AY.26 | 0.000028 |
ORF1ab/nsp3 | 342 | H342R | cAt | cGt | 1 | 1 | AY.27 | 0.000065 |
ORF1ab/nsp3 | 342 | H342Y | Cat | Tat | 1 | 1 | AY.29.1 | 0.000221 |
ORF1ab/nsp3 | 342 | H342Q | caT | caA | 1 | 1 | AY.34 | 0.000097 |
ORF1ab/nsp3 | 342 | H342Y | Cat | Tat | 1 | 1 | AY.36 | 0.000148 |
ORF1ab/nsp3 | 342 | H342Y | Cat | Tat | 1 | 1 | AY.37 | 0.000316 |
ORF1ab/nsp3 | 342 | H342Y | Cat | Tat | 1 | 1 | AY.38 | 0.000499 |
ORF1ab/nsp3 | 342 | H342Y | Cat | Tat | 1 | 1 | AY.4.3 | 0.000842 |
ORF1ab/nsp3 | 342 | H342del | CAT | --- | 1 | 1 | AY.4.5 | 0.000107 |
ORF1ab/nsp3 | 342 | H342Y | Cat | Tat | 1 | 1 | AY.41 | 0.000294 |
ORF1ab/nsp3 | 342 | H342H | caT | caC | 1 | 1 | AY.42 | 0.00004 |
ORF1ab/nsp3 | 342 | H342N | Cat | Aat | 1 | 1 | AY.43 | 0.000004 |
ORF1ab/nsp3 | 342 | H342del | CAT | --- | 1 | 1 | AY.43 | 0.000004 |
ORF1ab/nsp3 | 342 | H342M | CAT | ATG | 1 | 1 | AY.43 | 0.000004 |
ORF1ab/nsp3 | 342 | H342N | Cat | Aat | 1 | 1 | AY.44 | 0.000006 |
ORF1ab/nsp3 | 342 | H342R | cAt | cGt | 1 | 1 | AY.44 | 0.000006 |
ORF1ab/nsp3 | 342 | H342del | CAT | --- | 1 | 1 | AY.44 | 0.000006 |
ORF1ab/nsp3 | 342 | H342Q | caT | caA | 1 | 1 | AY.46 | 0.000104 |
ORF1ab/nsp3 | 342 | H342Y | Cat | Tat | 1 | 1 | AY.46.1 | 0.001027 |
ORF1ab/nsp3 | 342 | H342Y | Cat | Tat | 1 | 1 | AY.46.3 | 0.000934 |
ORF1ab/nsp3 | 342 | H342Y | Cat | Tat | 1 | 1 | AY.46.4 | 0.000165 |
ORF1ab/nsp3 | 342 | H342R | cAt | cGt | 1 | 1 | AY.46.6 | 0.000072 |
ORF1ab/nsp3 | 342 | H342H | caT | caC | 1 | 1 | AY.47 | 0.000031 |
ORF1ab/nsp3 | 342 | H342P | cAt | cCt | 1 | 1 | AY.5 | 0.000021 |
ORF1ab/nsp3 | 342 | H342L | cAt | cTt | 1 | 1 | AY.5 | 0.000021 |
ORF1ab/nsp3 | 342 | H342L | cAt | cTt | 1 | 1 | AY.54 | 0.000095 |
ORF1ab/nsp3 | 342 | H342P | cAt | cCt | 1 | 1 | AY.59 | 0.00053 |
ORF1ab/nsp3 | 342 | H342H | caT | caC | 1 | 1 | AY.6 | 0.000041 |
ORF1ab/nsp3 | 342 | H342Y | Cat | Tat | 1 | 1 | AY.60 | 0.000938 |
ORF1ab/nsp3 | 342 | H342R | cAt | cGt | 1 | 1 | AY.61 | 0.000105 |
ORF1ab/nsp3 | 342 | H342N | Cat | Aat | 1 | 1 | AY.61 | 0.000105 |
ORF1ab/nsp3 | 342 | H342Y | Cat | Tat | 1 | 1 | AY.64 | 0.000595 |
ORF1ab/nsp3 | 342 | H342del | CAT | --- | 1 | 1 | AY.67 | 0.000464 |
ORF1ab/nsp3 | 342 | H342Q | caT | caA | 1 | 1 | AY.68 | 0.000274 |
ORF1ab/nsp3 | 342 | H342Y | Cat | Tat | 1 | 1 | AY.7.1 | 0.000113 |
ORF1ab/nsp3 | 342 | H342H | caT | caC | 1 | 1 | AY.70 | 0.000209 |
ORF1ab/nsp3 | 342 | H342Y | Cat | Tat | 1 | 1 | AY.71 | 0.000475 |
ORF1ab/nsp3 | 342 | H342Y | Cat | Tat | 1 | 1 | AY.73 | 0.000665 |
ORF1ab/nsp3 | 342 | H342R | cAt | cGt | 1 | 1 | AY.75 | 0.000056 |
ORF1ab/nsp3 | 342 | H342del | CAT | --- | 1 | 1 | AY.84 | 0.000437 |
ORF1ab/nsp3 | 342 | H342H | caT | caC | 1 | 1 | AY.84 | 0.000437 |
ORF1ab/nsp3 | 342 | H342Y | Cat | Tat | 1 | 1 | AY.85 | 0.000427 |
ORF1ab/nsp3 | 342 | H342Y | Cat | Tat | 1 | 1 | AY.87 | 0.000833 |
ORF1ab/nsp3 | 342 | H342Y | Cat | Tat | 1 | 1 | AY.9.1 | 0.000084 |
ORF1ab/nsp3 | 342 | H342X | CaT | TaA | 1 | 1 | AY.9.2 | 0.000037 |
ORF1ab/nsp3 | 342 | H342H | caT | caC | 1 | 1 | AY.90 | 0.000684 |
ORF1ab/nsp3 | 342 | H342Y | Cat | Tat | 1 | 1 | AY.93 | 0.000273 |
ORF1ab/nsp3 | 342 | H342D | Cat | Gat | 1 | 1 | AY.98.1 | 0.000048 |
ORF1ab/nsp3 | 342 | H342del | CAT | --- | 1 | 1 | AY.99 | 0.001049 |
ORF1ab/nsp3 | 342 | H342R | cAt | cGt | 1 | 1 | AY.99.2 | 0.000092 |
ORF1ab/nsp3 | 342 | H342L | cAt | cTt | 1 | 1 | B.1 | 0.000009 |
ORF1ab/nsp3 | 342 | H342M | CAT | ATG | 1 | 1 | B.1 | 0.000009 |
ORF1ab/nsp3 | 342 | H342C | CAt | TGt | 1 | 1 | B.1 | 0.000009 |
ORF1ab/nsp3 | 342 | H342del | CAT | --- | 1 | 1 | B.1.1 | 0.000018 |
ORF1ab/nsp3 | 342 | H342R | cAt | cGt | 1 | 1 | B.1.1.1 | 0.000327 |
ORF1ab/nsp3 | 342 | H342Y | Cat | Tat | 1 | 1 | B.1.1.1 | 0.000327 |
ORF1ab/nsp3 | 342 | H342Y | Cat | Tat | 1 | 1 | B.1.1.100 | 0.04 |
ORF1ab/nsp3 | 342 | H342Y | Cat | Tat | 1 | 1 | B.1.1.133 | 0.008475 |
ORF1ab/nsp3 | 342 | H342Y | Cat | Tat | 1 | 1 | B.1.1.141 | 0.002012 |
ORF1ab/nsp3 | 342 | H342Y | Cat | Tat | 1 | 1 | B.1.1.15 | 0.013514 |
ORF1ab/nsp3 | 342 | H342R | cAt | cGt | 1 | 1 | B.1.1.157 | 0.000913 |
ORF1ab/nsp3 | 342 | H342Y | Cat | Tat | 1 | 1 | B.1.1.200 | 0.007463 |
ORF1ab/nsp3 | 342 | H342Q | caT | caG | 1 | 1 | B.1.1.222 | 0.000204 |
ORF1ab/nsp3 | 342 | H342P | cAt | cCt | 1 | 1 | B.1.1.222 | 0.000204 |
ORF1ab/nsp3 | 342 | H342Y | Cat | Tat | 1 | 1 | B.1.1.241 | 0.00207 |
ORF1ab/nsp3 | 342 | H342R | cAt | cGt | 1 | 1 | B.1.1.25 | 0.000569 |
ORF1ab/nsp3 | 342 | H342Y | Cat | Tat | 1 | 1 | B.1.1.255 | 0.00303 |
ORF1ab/nsp3 | 342 | H342Y | Cat | Tat | 1 | 1 | B.1.1.258 | 0.003257 |
ORF1ab/nsp3 | 342 | H342H | caT | caC | 1 | 1 | B.1.1.269 | 0.001353 |
ORF1ab/nsp3 | 342 | H342Y | Cat | Tat | 1 | 1 | B.1.1.27 | 0.00565 |
ORF1ab/nsp3 | 342 | H342Y | Cat | Tat | 1 | 1 | B.1.1.279 | 0.001121 |
ORF1ab/nsp3 | 342 | H342Y | Cat | Tat | 1 | 1 | B.1.1.294 | 0.001266 |
ORF1ab/nsp3 | 342 | H342R | cAt | cGt | 1 | 1 | B.1.1.306 | 0.000438 |
ORF1ab/nsp3 | 342 | H342del | CAT | --- | 1 | 1 | B.1.1.306 | 0.000438 |
ORF1ab/nsp3 | 342 | H342Y | Cat | Tat | 1 | 1 | B.1.1.307 | 0.002532 |
ORF1ab/nsp3 | 342 | H342Y | Cat | Tat | 1 | 1 | B.1.1.316 | 0.000925 |
ORF1ab/nsp3 | 342 | H342del | CAT | --- | 1 | 1 | B.1.1.33 | 0.000421 |
ORF1ab/nsp3 | 342 | H342Y | Cat | Tat | 1 | 1 | B.1.1.343 | 0.020833 |
ORF1ab/nsp3 | 342 | H342Y | Cat | Tat | 1 | 1 | B.1.1.347 | 0.018182 |
ORF1ab/nsp3 | 342 | H342del | CAT | --- | 1 | 1 | B.1.1.348 | 0.000796 |
ORF1ab/nsp3 | 342 | H342Y | Cat | Tat | 1 | 1 | B.1.1.398 | 0.003226 |
ORF1ab/nsp3 | 342 | H342Y | Cat | Tat | 1 | 1 | B.1.1.409 | 0.002833 |
ORF1ab/nsp3 | 342 | H342Y | Cat | Tat | 1 | 1 | B.1.1.41 | 0.006329 |
ORF1ab/nsp3 | 342 | H342Y | Cat | Tat | 1 | 1 | B.1.1.419 | 0.007407 |
ORF1ab/nsp3 | 342 | H342Y | Cat | Tat | 1 | 1 | B.1.1.434 | 0.000349 |
ORF1ab/nsp3 | 342 | H342Q | caT | caG | 1 | 1 | B.1.1.45 | 0.014085 |
ORF1ab/nsp3 | 342 | H342Y | Cat | Tat | 1 | 1 | B.1.1.466 | 0.008696 |
ORF1ab/nsp3 | 342 | H342Y | Cat | Tat | 1 | 1 | B.1.1.517 | 0.006803 |
ORF1ab/nsp3 | 342 | H342Y | Cat | Tat | 1 | 1 | B.1.1.523 | 0.001563 |
ORF1ab/nsp3 | 342 | H342H | caT | caC | 1 | 1 | B.1.1.526 | 0.003546 |
ORF1ab/nsp3 | 342 | H342L | cAt | cTt | 1 | 1 | B.1.1.7 | 0.000001 |
ORF1ab/nsp3 | 342 | H342del1 | caT | ca- | 1 | 1 | B.1.1.7 | 0.000001 |
ORF1ab/nsp3 | 342 | H342D | Cat | Gat | 1 | 1 | B.1.1.7 | 0.000001 |
ORF1ab/nsp3 | 342 | H342C | CAt | TGt | 1 | 1 | B.1.1.7 | 0.000001 |
ORF1ab/nsp3 | 342 | H342N | Cat | Aat | 1 | 1 | B.1.1.7 | 0.000001 |
ORF1ab/nsp3 | 342 | H342T | CAt | ACt | 1 | 1 | B.1.1.7 | 0.000001 |
ORF1ab/nsp3 | 342 | H342Y | Cat | Tat | 1 | 1 | B.1.1.70 | 0.000341 |
ORF1ab/nsp3 | 342 | H342del | CAT | --- | 1 | 1 | B.1.110.3 | 0.000718 |
ORF1ab/nsp3 | 342 | H342Y | Cat | Tat | 1 | 1 | B.1.128 | 0.000635 |
ORF1ab/nsp3 | 342 | H342Y | Cat | Tat | 1 | 1 | B.1.146 | 0.004237 |
ORF1ab/nsp3 | 342 | H342Y | Cat | Tat | 1 | 1 | B.1.147 | 0.000756 |
ORF1ab/nsp3 | 342 | H342del | CAT | --- | 1 | 1 | B.1.160 | 0.000031 |
ORF1ab/nsp3 | 342 | H342H | caT | caC | 1 | 1 | B.1.160 | 0.000031 |
ORF1ab/nsp3 | 342 | H342Y | Cat | Tat | 1 | 1 | B.1.160.16 | 0.000929 |
ORF1ab/nsp3 | 342 | H342Y | Cat | Tat | 1 | 1 | B.1.177.17 | 0.000821 |
ORF1ab/nsp3 | 342 | H342Y | Cat | Tat | 1 | 1 | B.1.177.4 | 0.000211 |
ORF1ab/nsp3 | 342 | H342Y | Cat | Tat | 1 | 1 | B.1.177.44 | 0.000519 |
ORF1ab/nsp3 | 342 | H342R | cAt | cGt | 1 | 1 | B.1.177.45 | 0.000381 |
ORF1ab/nsp3 | 342 | H342Y | Cat | Tat | 1 | 1 | B.1.177.54 | 0.000606 |
ORF1ab/nsp3 | 342 | H342Y | Cat | Tat | 1 | 1 | B.1.177.56 | 0.000668 |
ORF1ab/nsp3 | 342 | H342R | cAt | cGt | 1 | 1 | B.1.177.60 | 0.000218 |
ORF1ab/nsp3 | 342 | H342H | caT | caC | 1 | 1 | B.1.177.65 | 0.000665 |
ORF1ab/nsp3 | 342 | H342Y | Cat | Tat | 1 | 1 | B.1.177.77 | 0.000726 |
ORF1ab/nsp3 | 342 | H342H | caT | caC | 1 | 1 | B.1.177.79 | 0.002342 |
ORF1ab/nsp3 | 342 | H342Y | Cat | Tat | 1 | 1 | B.1.177.86 | 0.000183 |
ORF1ab/nsp3 | 342 | H342Y | Cat | Tat | 1 | 1 | B.1.189 | 0.004292 |
ORF1ab/nsp3 | 342 | H342H | caT | caC | 1 | 1 | B.1.2 | 0.000009 |
ORF1ab/nsp3 | 342 | H342Q | caT | caG | 1 | 1 | B.1.2 | 0.000009 |
ORF1ab/nsp3 | 342 | H342del | CAT | --- | 1 | 1 | B.1.218 | 0.005155 |
ORF1ab/nsp3 | 342 | H342F | CAt | TTt | 1 | 1 | B.1.221 | 0.000071 |
ORF1ab/nsp3 | 342 | H342L | cAt | cTt | 1 | 1 | B.1.221 | 0.000071 |
ORF1ab/nsp3 | 342 | H342N | Cat | Aat | 1 | 1 | B.1.222 | 0.001692 |
ORF1ab/nsp3 | 342 | H342Y | Cat | Tat | 1 | 1 | B.1.232 | 0.000537 |
ORF1ab/nsp3 | 342 | H342Y | Cat | Tat | 1 | 1 | B.1.235 | 0.002519 |
ORF1ab/nsp3 | 342 | H342Y | Cat | Tat | 1 | 1 | B.1.236 | 0.002053 |
ORF1ab/nsp3 | 342 | H342Y | Cat | Tat | 1 | 1 | B.1.258.11 | 0.000396 |
ORF1ab/nsp3 | 342 | H342Y | Cat | Tat | 1 | 1 | B.1.258.12 | 0.007874 |
ORF1ab/nsp3 | 342 | H342Y | Cat | Tat | 1 | 1 | B.1.258.3 | 0.001675 |
ORF1ab/nsp3 | 342 | H342Y | Cat | Tat | 1 | 1 | B.1.298 | 0.002114 |
ORF1ab/nsp3 | 342 | H342L | cAt | cTt | 1 | 1 | B.1.3 | 0.002618 |
ORF1ab/nsp3 | 342 | H342Y | Cat | Tat | 1 | 1 | B.1.305 | 0.002151 |
ORF1ab/nsp3 | 342 | H342Y | Cat | Tat | 1 | 1 | B.1.320 | 0.001245 |
ORF1ab/nsp3 | 342 | H342Y | Cat | Tat | 1 | 1 | B.1.328 | 0.03125 |
ORF1ab/nsp3 | 342 | H342Y | Cat | Tat | 1 | 1 | B.1.349 | 0.000715 |
ORF1ab/nsp3 | 342 | H342Q | caT | caA | 1 | 1 | B.1.351 | 0.00003 |
ORF1ab/nsp3 | 342 | H342P | cAT | cCC | 1 | 1 | B.1.351 | 0.00003 |
ORF1ab/nsp3 | 342 | H342H | caT | caC | 1 | 1 | B.1.351 | 0.00003 |
ORF1ab/nsp3 | 342 | H342Y | Cat | Tat | 1 | 1 | B.1.351.2 | 0.000303 |
ORF1ab/nsp3 | 342 | H342H | caT | caC | 1 | 1 | B.1.356 | 0.001727 |
ORF1ab/nsp3 | 342 | H342del | CAT | --- | 1 | 1 | B.1.36 | 0.000146 |
ORF1ab/nsp3 | 342 | H342Y | Cat | Tat | 1 | 1 | B.1.36.1 | 0.00114 |
ORF1ab/nsp3 | 342 | H342H | caT | caC | 1 | 1 | B.1.36.29 | 0.000517 |
ORF1ab/nsp3 | 342 | H342Y | Cat | Tat | 1 | 1 | B.1.361 | 0.001289 |
ORF1ab/nsp3 | 342 | H342Y | Cat | Tat | 1 | 1 | B.1.369 | 0.000285 |
ORF1ab/nsp3 | 342 | H342H | caT | caC | 1 | 1 | B.1.369 | 0.000285 |
ORF1ab/nsp3 | 342 | H342Y | Cat | Tat | 1 | 1 | B.1.371 | 0.001122 |
ORF1ab/nsp3 | 342 | H342Y | Cat | Tat | 1 | 1 | B.1.396 | 0.000706 |
ORF1ab/nsp3 | 342 | H342Y | Cat | Tat | 1 | 1 | B.1.399 | 0.001934 |
ORF1ab/nsp3 | 342 | H342H | caT | caC | 1 | 1 | B.1.404 | 0.001302 |
ORF1ab/nsp3 | 342 | H342Y | Cat | Tat | 1 | 1 | B.1.408 | 0.00369 |
ORF1ab/nsp3 | 342 | H342Y | Cat | Tat | 1 | 1 | B.1.416 | 0.001269 |
ORF1ab/nsp3 | 342 | H342Y | Cat | Tat | 1 | 1 | B.1.422 | 0.000812 |
ORF1ab/nsp3 | 342 | H342Y | Cat | Tat | 1 | 1 | B.1.425 | 0.002994 |
ORF1ab/nsp3 | 342 | H342del | CAT | --- | 1 | 1 | B.1.429 | 0.000024 |
ORF1ab/nsp3 | 342 | H342R | cAt | cGt | 1 | 1 | B.1.429 | 0.000024 |
ORF1ab/nsp3 | 342 | H342Y | Cat | Tat | 1 | 1 | B.1.433 | 0.003195 |
ORF1ab/nsp3 | 342 | H342Y | Cat | Tat | 1 | 1 | B.1.439 | 0.005917 |
ORF1ab/nsp3 | 342 | H342Y | Cat | Tat | 1 | 1 | B.1.453 | 0.003236 |
ORF1ab/nsp3 | 342 | H342Y | Cat | Tat | 1 | 1 | B.1.456 | 0.003268 |
ORF1ab/nsp3 | 342 | H342Y | Cat | Tat | 1 | 1 | B.1.459 | 0.004082 |
ORF1ab/nsp3 | 342 | H342P | cAt | cCt | 1 | 1 | B.1.462 | 0.007246 |
ORF1ab/nsp3 | 342 | H342Y | Cat | Tat | 1 | 1 | B.1.462 | 0.007246 |
ORF1ab/nsp3 | 342 | H342Y | Cat | Tat | 1 | 1 | B.1.480 | 0.002488 |
ORF1ab/nsp3 | 342 | H342P | cAt | cCt | 1 | 1 | B.1.497 | 0.000315 |
ORF1ab/nsp3 | 342 | H342Y | Cat | Tat | 1 | 1 | B.1.501 | 0.007353 |
ORF1ab/nsp3 | 342 | H342Y | Cat | Tat | 1 | 1 | B.1.517 | 0.000427 |
ORF1ab/nsp3 | 342 | H342N | Cat | Aat | 1 | 1 | B.1.525 | 0.000113 |
ORF1ab/nsp3 | 342 | H342H | caT | caC | 1 | 1 | B.1.525 | 0.000113 |
ORF1ab/nsp3 | 342 | H342Y | Cat | Tat | 1 | 1 | B.1.538 | 0.008065 |
ORF1ab/nsp3 | 342 | H342Y | Cat | Tat | 1 | 1 | B.1.539 | 0.017544 |
ORF1ab/nsp3 | 342 | H342Y | Cat | Tat | 1 | 1 | B.1.541 | 0.004425 |
ORF1ab/nsp3 | 342 | H342Y | Cat | Tat | 1 | 1 | B.1.551 | 0.00129 |
ORF1ab/nsp3 | 342 | H342Y | Cat | Tat | 1 | 1 | B.1.563 | 0.016949 |
ORF1ab/nsp3 | 342 | H342N | Cat | Aat | 1 | 1 | B.1.596 | 0.000087 |
ORF1ab/nsp3 | 342 | H342del | CAT | --- | 1 | 1 | B.1.596 | 0.000087 |
ORF1ab/nsp3 | 342 | H342S | CAT | AGC | 1 | 1 | B.1.617.1 | 0.000129 |
ORF1ab/nsp3 | 342 | H342D | Cat | Gat | 1 | 1 | B.1.617.2 | 0.000004 |
ORF1ab/nsp3 | 342 | H342Q | caT | caA | 1 | 1 | B.1.617.2 | 0.000004 |
ORF1ab/nsp3 | 342 | H342Y | Cat | Tat | 1 | 1 | B.1.620 | 0.000946 |
ORF1ab/nsp3 | 342 | H342H | caT | caC | 1 | 1 | B.1.621 | 0.000089 |
ORF1ab/nsp3 | 342 | H342del2 | cAT | c-- | 1 | 1 | B.1.621.1 | 0.000506 |
ORF1ab/nsp3 | 342 | H342Q | caT | caG | 1 | 1 | B.1.625 | 0.002353 |
ORF1ab/nsp3 | 342 | H342del | CAT | --- | 1 | 1 | B.1.627 | 0.00202 |
ORF1ab/nsp3 | 342 | H342Y | Cat | Tat | 1 | 1 | B.1.631 | 0.003367 |
ORF1ab/nsp3 | 342 | H342Q | caT | caG | 1 | 1 | B.1.637 | 0.000073 |
ORF1ab/nsp3 | 342 | H342H | caT | caC | 1 | 1 | B.1.93 | 0.000934 |
ORF1ab/nsp3 | 342 | H342Y | Cat | Tat | 1 | 1 | B.12 | 0.00641 |
ORF1ab/nsp3 | 342 | H342Y | Cat | Tat | 1 | 1 | B.29 | 0.003509 |
ORF1ab/nsp3 | 342 | H342Y | Cat | Tat | 1 | 1 | B.35 | 0.007812 |
ORF1ab/nsp3 | 342 | H342Y | Cat | Tat | 1 | 1 | B.40 | 0.000364 |
ORF1ab/nsp3 | 342 | H342del | CAT | --- | 1 | 1 | B.57 | 0.015152 |
ORF1ab/nsp3 | 342 | H342Y | Cat | Tat | 1 | 1 | C.1 | 0.002392 |
ORF1ab/nsp3 | 342 | H342Y | Cat | Tat | 1 | 1 | C.17 | 0.055556 |
ORF1ab/nsp3 | 342 | H342Y | Cat | Tat | 1 | 1 | C.36 | 0.000911 |
ORF1ab/nsp3 | 342 | H342del | CAT | --- | 1 | 1 | C.37 | 0.000116 |
ORF1ab/nsp3 | 342 | H342H | caT | caC | 1 | 1 | D.2 | 0.000075 |
ORF1ab/nsp3 | 342 | H342R | cAt | cGt | 1 | 1 | N.5 | 0.001767 |
ORF1ab/nsp3 | 342 | H342del | CAT | --- | 1 | 1 | N.6 | 0.007092 |
ORF1ab/nsp3 | 342 | H342C | CAt | TGt | 1 | 1 | P.1 | 0.000016 |
ORF1ab/nsp3 | 342 | H342R | cAt | cGt | 1 | 1 | P.1 | 0.000016 |
ORF1ab/nsp3 | 342 | H342A | CAt | GCt | 1 | 1 | P.1 | 0.000016 |
ORF1ab/nsp3 | 342 | H342Y | Cat | Tat | 1 | 1 | P.1.12 | 0.000484 |
ORF1ab/nsp3 | 342 | H342del | CAT | --- | 1 | 1 | P.1.13 | 0.000898 |
ORF1ab/nsp3 | 342 | H342H | caT | caC | 1 | 1 | P.1.14 | 0.000048 |
ORF1ab/nsp3 | 342 | H342H | caT | caC | 1 | 1 | P.1.17 | 0.000162 |
ORF1ab/nsp3 | 342 | H342R | cAt | cGt | 1 | 1 | P.2 | 0.000187 |
ORF1ab/nsp3 | 342 | H342Y | Cat | Tat | 1 | 1 | Q.7 | 0.001111 |
ORF1ab/nsp3 | 342 | H342D | Cat | Gat | 1 | 1 | Q.8 | 0.000165 |
ORF1ab/nsp3 | 342 | H342H | caT | caC | 1 | 1 | V.1 | 0.022727 |
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CoV-GLUE is still in development. CoV-GLUE was originally developed as part of COG-UK by Josh Singer using the GLUE framework at the MRC-University of Glasgow Centre for Virus Research (CVR). In 2021 it was redeveloped by Richard Orton to scale to the millions of genome sequences available. We acknowledge support from the MRC (MC_UU_12014/12), WT (220977/Z/20/Z) and UKRI G2P (MR/W005611/1). Please contact Richard Orton with any queries: Richard.Orton@glasgow.ac.uk
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