CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF1ab/nsp3 : CodonNum = 340 & Codon = Act

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF1ab/nsp3340P340TP1158TnonsynCctAct1231180.959353737-3739

Details of the mutation no within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF1ab/nsp3340P340TCctAct118123All0.000023
ORF1ab/nsp3340P340TCctAct2828AY.98.10.001356
ORF1ab/nsp3340P340TCctAct1515AY.40.000023
ORF1ab/nsp3340P340TCctAct99AY.430.00004
ORF1ab/nsp3340P340TCctAct99B.1.5950.002349
ORF1ab/nsp3340P340TCctAct88B.1.617.20.00003
ORF1ab/nsp3340P340TCctAct68P.10.000095
ORF1ab/nsp3340P340TCctAct77B.10.000064
ORF1ab/nsp3340P340TCctAct360.166667
ORF1ab/nsp3340P340TCctAct33AY.1030.000019
ORF1ab/nsp3340P340TCctAct22AY.30.00002
ORF1ab/nsp3340P340TCctAct22AY.340.000194
ORF1ab/nsp3340P340TCctAct22AY.390.000049
ORF1ab/nsp3340P340TCctAct22AY.610.00021
ORF1ab/nsp3340P340TCctAct22B0.000256
ORF1ab/nsp3340P340TCctAct22B.1.1.70.000002
ORF1ab/nsp3340P340TCctAct22B.1.20.000018
ORF1ab/nsp3340P340TCctAct22B.1.5820.000981
ORF1ab/nsp3340P340TCctAct11A0.000387
ORF1ab/nsp3340P340TCctAct11AY.1050.000643
ORF1ab/nsp3340P340TCctAct11AY.230.00007
ORF1ab/nsp3340P340TCctAct11AY.290.000016
ORF1ab/nsp3340P340TCctAct11AY.450.000122
ORF1ab/nsp3340P340TCctAct11AY.750.000056
ORF1ab/nsp3340P340TCctAct11AY.930.000273
ORF1ab/nsp3340P340TCctAct11B.1.1.1530.001095
ORF1ab/nsp3340P340TCctAct11B.1.177.70.000165
ORF1ab/nsp3340P340TCctAct11B.1.36.360.000602
ORF1ab/nsp3340P340TCctAct11B.1.4290.000024
ORF1ab/nsp3340P340TCctAct11B.1.4530.003236
ORF1ab/nsp3340P340TCctAct11B.1.5740.002151
ORF1ab/nsp3340P340TCctAct11B.1.940.027027