CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF1ab/nsp3 : CodonNum = 340

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF1ab/nsp3340P340LP1158LnonsyncCtcTt838683800.9992853737-3739
ORF1ab/nsp3340P340LP1158LnonsyncCTcTC838630.0003577393737-3739
ORF1ab/nsp3340P340LP1158LnonsyncCTcTG838620.0002384933737-3739
ORF1ab/nsp3340P340LP1158LnonsyncCTcTA838610.0001192463737-3739
ORF1ab/nsp3340P340SP1158SnonsynCctTct569856910.9987713737-3739
ORF1ab/nsp3340P340SP1158SnonsynCcTTcG569850.0008775013737-3739
ORF1ab/nsp3340P340SP1158SnonsynCcTTcC569820.0003513737-3739
ORF1ab/nsp3340P340HP1158HnonsyncCtcAt14414413737-3739
ORF1ab/nsp3340P340PP1158PsynccTccC1341160.8656723737-3739
ORF1ab/nsp3340P340PP1158PsynccTccG13490.06716423737-3739
ORF1ab/nsp3340P340PP1158PsynccTccA13490.06716423737-3739
ORF1ab/nsp3340P340TP1158TnonsynCctAct1231180.959353737-3739
ORF1ab/nsp3340P340TP1158TnonsynCcTAcA12320.01626023737-3739
ORF1ab/nsp3340P340TP1158TnonsynCcTAcG12320.01626023737-3739
ORF1ab/nsp3340P340TP1158TnonsynCcTAcC12310.008130083737-3739
ORF1ab/nsp3340P340delP1158deldelCCT---10210213737-3739
ORF1ab/nsp3340P340AP1158AnonsynCctGct15110.7333333737-3739
ORF1ab/nsp3340P340AP1158AnonsynCcTGcG1530.23737-3739
ORF1ab/nsp3340P340AP1158AnonsynCcTGcC1510.06666673737-3739
ORF1ab/nsp3340P340RP1158RnonsyncCtcGt1390.6923083737-3739
ORF1ab/nsp3340P340RP1158RnonsyncCTcGG1320.1538463737-3739
ORF1ab/nsp3340P340RP1158RnonsyncCTcGA1310.07692313737-3739
ORF1ab/nsp3340P340RP1158RnonsyncCTcGC1310.07692313737-3739
ORF1ab/nsp3340P340QP1158QnonsyncCTcAG650.8333333737-3739
ORF1ab/nsp3340P340QP1158QnonsyncCTcAA610.1666673737-3739
ORF1ab/nsp3340P340FP1158FnonsynCCtTTt540.83737-3739
ORF1ab/nsp3340P340VP1158VnonsynCCtGTt530.63737-3739
ORF1ab/nsp3340P340VP1158VnonsynCCTGTG520.43737-3739
ORF1ab/nsp3340P340FP1158FnonsynCCTTTC510.23737-3739
ORF1ab/nsp3340P340del1P1158del1delccTcc-4413737-3739
ORF1ab/nsp3340P340WP1158WnonsynCCTTGG3313737-3739
ORF1ab/nsp3340P340IP1158InonsynCCtATt320.6666673737-3739
ORF1ab/nsp3340P340IP1158InonsynCCTATC310.3333333737-3739
ORF1ab/nsp3340P340DP1158DnonsynCCtGAt2213737-3739
ORF1ab/nsp3340P340EP1158EnonsynCCTGAG2213737-3739
ORF1ab/nsp3340P340CP1158CnonsynCCtTGt2213737-3739
ORF1ab/nsp3340P340YP1158YnonsynCCtTAt1113737-3739

Details of the mutation no within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF1ab/nsp3340P340LcCtcTt83808386All0.001603
ORF1ab/nsp3340P340LcCTcTC38386All0.000001
ORF1ab/nsp3340P340LcCTcTG28386All0
ORF1ab/nsp3340P340LcCTcTA18386All0
ORF1ab/nsp3340P340SCctTct56915698All0.001088
ORF1ab/nsp3340P340SCcTTcG55698All0.000001
ORF1ab/nsp3340P340SCcTTcC25698All0
ORF1ab/nsp3340P340LcCtcTt767767B.1.1.390.390928
ORF1ab/nsp3340P340LcCtcTt763763B.1.5510.984516
ORF1ab/nsp3340P340LcCtcTt738739B.1.617.20.002779
ORF1ab/nsp3340P340LcCTcTC1739B.1.617.20.000004
ORF1ab/nsp3340P340LcCtcTt705705B.1.1.70.000631
ORF1ab/nsp3340P340SCctTct677677AY.40.001054
ORF1ab/nsp3340P340LcCtcTt654654B.1.20.005759
ORF1ab/nsp3340P340LcCtcTt588588AY.1020.01559
ORF1ab/nsp3340P340LcCtcTt575575B.1.1.2840.061755
ORF1ab/nsp3340P340SCctTct516516B.1.1.70.000462
ORF1ab/nsp3340P340LcCtcTt435435AY.40.000677
ORF1ab/nsp3340P340SCctTct388388B.1.20.003416
ORF1ab/nsp3340P340SCctTct383383B.1.617.20.001442
ORF1ab/nsp3340P340LcCtcTt321321B.1.4270.01621
ORF1ab/nsp3340P340SCctTct312312AY.440.001899
ORF1ab/nsp3340P340SCctTct245245AY.1110.044872
ORF1ab/nsp3340P340SCctTct170170AY.1030.001056
ORF1ab/nsp3340P340SCctTct166166B.1.4290.003906
ORF1ab/nsp3340P340SCctTct161161B.1.1.2290.925287
ORF1ab/nsp3340P340LcCtcTt160160B.10.001466
ORF1ab/nsp3340P340LcCtcTt155155AY.290.002445
ORF1ab/nsp3340P340SCctTct147147AY.7.10.016567
ORF1ab/nsp3340P340HcCtcAt144144All0.000028
ORF1ab/nsp3340P340LcCtcTt143143AY.250.00086
ORF1ab/nsp3340P340SCctTct141141B.1.1770.001857
ORF1ab/nsp3340P340PccTccC116134All0.000022
ORF1ab/nsp3340P340PccTccG9134All0.000002
ORF1ab/nsp3340P340PccTccA9134All0.000002
ORF1ab/nsp3340P340LcCtcTt131131AY.1030.000813
ORF1ab/nsp3340P340TCctAct118123All0.000023
ORF1ab/nsp3340P340TCcTAcG2123All0
ORF1ab/nsp3340P340TCcTAcA2123All0
ORF1ab/nsp3340P340TCcTAcC1123All0
ORF1ab/nsp3340P340SCctTct105105AY.320.055911
ORF1ab/nsp3340P340SCctTct104105AY.430.000461
ORF1ab/nsp3340P340SCcTTcG1105AY.430.000004
ORF1ab/nsp3340P340SCctTct103103AY.460.01072
ORF1ab/nsp3340P340delCCT---102102All0.00002
ORF1ab/nsp3340P340SCctTct101101B.1.5240.142053
ORF1ab/nsp3340P340LcCtcTt9393AY.430.000412
ORF1ab/nsp3340P340LcCtcTt9393AY.930.025396
ORF1ab/nsp3340P340LcCtcTt9191AY.390.002249
ORF1ab/nsp3340P340SCctTct8686B.1.1161
ORF1ab/nsp3340P340SCctTct8484B.1.2430.005845
ORF1ab/nsp3340P340LcCtcTt8282R.10.007381
ORF1ab/nsp3340P340LcCtcTt8181B.1.1770.001067
ORF1ab/nsp3340P340SCctTct7878AY.30.000776
ORF1ab/nsp3340P340LcCtcTt7676D.20.005703
ORF1ab/nsp3340P340LcCtcTt7575B.1.1.2770.056904
ORF1ab/nsp3340P340LcCtcTt7272B.1.4290.001694
ORF1ab/nsp3340P340LcCtcTt7171AY.260.00201
ORF1ab/nsp3340P340LcCtcTt7171AY.440.000432
ORF1ab/nsp3340P340SCctTct6970B.10.000632
ORF1ab/nsp3340P340SCcTTcG170B.10.000009
ORF1ab/nsp3340P340SCctTct6969AY.920.019822
ORF1ab/nsp3340P340SCctTct6969C.350.053406
ORF1ab/nsp3340P340SCctTct6265P.10.000977
ORF1ab/nsp3340P340SCcTTcG365P.10.000047
ORF1ab/nsp3340P340LcCtcTt6464B.1.1.500.043449
ORF1ab/nsp3340P340SCctTct6363B.1.10.001143
ORF1ab/nsp3340P340LcCtcTt5757B.1.1.3340.934426
ORF1ab/nsp3340P340SCctTct5656AY.1000.002576
ORF1ab/nsp3340P340SCctTct5353AY.1020.001405
ORF1ab/nsp3340P340SCctTct5252AY.130.008371
ORF1ab/nsp3340P340SCctTct4949B.1.4270.002474
ORF1ab/nsp3340P340SCctTct4949D.20.003677
ORF1ab/nsp3340P340LcCtcTt4848B.1.3490.03431
ORF1ab/nsp3340P340SCctTct4747B.1.5260.001105
ORF1ab/nsp3340P340LcCtcTt4747B.1.5820.023062
ORF1ab/nsp3340P340LcCtcTt4646B.1.10.000834
ORF1ab/nsp3340P340SCctTct4545AY.250.000271
ORF1ab/nsp3340P340LcCtcTt4545AY.470.0014
ORF1ab/nsp3340P340LcCtcTt4040AY.30.000398
ORF1ab/nsp3340P340SCctTct4040AY.980.00316
ORF1ab/nsp3340P340LcCtcTt4040B.1.1600.001248
ORF1ab/nsp3340P340HcCtcAt3939AY.40.000061
ORF1ab/nsp3340P340LcCtcTt3838B.1.177.210.002906
ORF1ab/nsp3340P340SCctTct3737B.1.1.3730.880952
ORF1ab/nsp3340P340SCctTct3636AY.1200.001338
ORF1ab/nsp3340P340SCctTct3636B.1.1.700.012278
ORF1ab/nsp3340P340LcCtcTt3131AY.4.20.000672
ORF1ab/nsp3340P340LcCtcTt3030AY.450.003651
ORF1ab/nsp3340P340HcCtcAt2929B.1.617.20.000109
ORF1ab/nsp3340P340TCctAct2828AY.98.10.001356
ORF1ab/nsp3340P340LcCtcTt2727B.1.1.370.005207
ORF1ab/nsp3340P340LcCtcTt2727B.1.2580.001797
ORF1ab/nsp3340P340SCctTct2727B.1.258.170.002807
ORF1ab/nsp3340P340SCctTct2525AY.50.000516
ORF1ab/nsp3340P340LcCtcTt2525AY.540.002384
ORF1ab/nsp3340P340LcCtcTt2225P.10.000347
ORF1ab/nsp3340P340LcCTcTG225P.10.000032
ORF1ab/nsp3340P340LcCTcTA125P.10.000016
ORF1ab/nsp3340P340SCctTct2424AY.750.001345
ORF1ab/nsp3340P340SCctTct2424B.1.1.5190.000953
ORF1ab/nsp3340P340SCctTct2323AY.390.000568
ORF1ab/nsp3340P340LcCtcTt2323B.1.2210.001634
ORF1ab/nsp3340P340LcCtcTt2222AY.1190.000777
ORF1ab/nsp3340P340LcCtcTt2222AY.460.00229
ORF1ab/nsp3340P340LcCtcTt2020B.1.5750.006068
ORF1ab/nsp3340P340LcCtcTt2020Q.30.002901
ORF1ab/nsp3340P340SCctTct1919AY.840.008311
ORF1ab/nsp3340P340LcCtcTt1919B.1.1.3690.008478
ORF1ab/nsp3340P340LcCtcTt1919B.1.1.5190.000755
ORF1ab/nsp3340P340SCctTct1818AY.1190.000636
ORF1ab/nsp3340P340HcCtcAt1818B.1.1.70.000016
ORF1ab/nsp3340P340delCCT---1818P.10.000284
ORF1ab/nsp3340P340SCctTct1717AY.290.000268
ORF1ab/nsp3340P340LcCtcTt1717AY.320.009052
ORF1ab/nsp3340P340SCctTct1717B.1.1.440.040964
ORF1ab/nsp3340P340SCctTct1717B.1.2340.002243
ORF1ab/nsp3340P340delCCT---1717P.1.150.00395
ORF1ab/nsp3340P340SCctTct1616B.1.1.3421
ORF1ab/nsp3340P340SCctTct1616B.1.5170.006832
ORF1ab/nsp3340P340ACctGct1115All0.000002
ORF1ab/nsp3340P340ACcTGcG315All0.000001
ORF1ab/nsp3340P340ACcTGcC115All0
ORF1ab/nsp3340P340LcCtcTt1515AY.1170.001268
ORF1ab/nsp3340P340LcCtcTt1515AY.34.10.007649
ORF1ab/nsp3340P340TCctAct1515AY.40.000023
ORF1ab/nsp3340P340LcCtcTt1515B0.001917
ORF1ab/nsp3340P340SCctTct1515B.1.1.2220.00306
ORF1ab/nsp3340P340LcCtcTt1515B.1.177.820.00716
ORF1ab/nsp3340P340SCctTct1515B.1.3510.000446
ORF1ab/nsp3340P340LcCtcTt1414AY.190.015964
ORF1ab/nsp3340P340LcCtcTt1414AY.60.000576
ORF1ab/nsp3340P340PccTccC1314B.1.1.70.000012
ORF1ab/nsp3340P340PccTccA114B.1.1.70.000001
ORF1ab/nsp3340P340RcCtcGt913All0.000002
ORF1ab/nsp3340P340RcCTcGG213All0
ORF1ab/nsp3340P340RcCTcGA113All0
ORF1ab/nsp3340P340RcCTcGC113All0
ORF1ab/nsp3340P340LcCtcTt1313AY.1050.00836
ORF1ab/nsp3340P340SCctTct1313B.1.1600.000405
ORF1ab/nsp3340P340SCctTct1313B.1.177.860.002385
ORF1ab/nsp3340P340SCctTct1313B.1.5960.001133
ORF1ab/nsp3340P340PccTccC1313B.1.617.20.000049
ORF1ab/nsp3340P340SCctTct1313Q.80.002144
ORF1ab/nsp3340P340LcCtcTt1212AY.5.30.004049
ORF1ab/nsp3340P340LcCtcTt1212B.1.1.2140.000665
ORF1ab/nsp3340P340SCctTct1212B.1.1.2140.000665
ORF1ab/nsp3340P340LcCtcTt1111AY.1100.00124
ORF1ab/nsp3340P340SCctTct1111AY.1160.003155
ORF1ab/nsp3340P340LcCtcTt1111AY.90.000744
ORF1ab/nsp3340P340SCctTct1111B.1.2210.000781
ORF1ab/nsp3340P340PccTccC1010AY.1030.000062
ORF1ab/nsp3340P340SCctTct1010AY.1070.00466
ORF1ab/nsp3340P340SCctTct1010AY.200.000389
ORF1ab/nsp3340P340SCctTct1010AY.270.000647
ORF1ab/nsp3340P340PccTccC1010B.1.10.000181
ORF1ab/nsp3340P340LcCtcTt1010B.1.1.2310.03096
ORF1ab/nsp3340P340LcCtcTt1010B.1.1.5260.035461
ORF1ab/nsp3340P340LcCtcTt1010B.1.3360.02439
ORF1ab/nsp3340P340LcCtcTt1010B.1.5230.02451
ORF1ab/nsp3340P340delCCT---1010P.1.120.00484
ORF1ab/nsp3340P340LcCtcTt1010P.20.001866
ORF1ab/nsp3340P340LcCtcTt99AY.330.000601
ORF1ab/nsp3340P340TCctAct99AY.430.00004
ORF1ab/nsp3340P340SCctTct99AY.470.00028
ORF1ab/nsp3340P340SCctTct99B.1.177.80.006772
ORF1ab/nsp3340P340SCctTct99B.1.36.180.003782
ORF1ab/nsp3340P340LcCtcTt99B.1.5260.000212
ORF1ab/nsp3340P340TCctAct99B.1.5950.002349
ORF1ab/nsp3340P340SCctTct99C.370.001045
ORF1ab/nsp3340P340PccTccG89P.10.000126
ORF1ab/nsp3340P340PccTccC19P.10.000016
ORF1ab/nsp3340P340LcCtcTt88AY.1180.000501
ORF1ab/nsp3340P340LcCtcTt88AY.1200.000297
ORF1ab/nsp3340P340delCCT---88B.10.000073
ORF1ab/nsp3340P340LcCtcTt88B.1.1.1350.037559
ORF1ab/nsp3340P340SCctTct88B.1.1.2680.119403
ORF1ab/nsp3340P340SCctTct88B.1.1450.421053
ORF1ab/nsp3340P340LcCtcTt88B.1.2430.000557
ORF1ab/nsp3340P340LcCtcTt88B.1.360.001167
ORF1ab/nsp3340P340SCctTct88B.1.6060.048193
ORF1ab/nsp3340P340TCctAct88B.1.617.20.00003
ORF1ab/nsp3340P340LcCtcTt88B.1.6210.000708
ORF1ab/nsp3340P340TCctAct68P.10.000095
ORF1ab/nsp3340P340TCcTAcG28P.10.000032
ORF1ab/nsp3340P340LcCtcTt77AY.1000.000322
ORF1ab/nsp3340P340LcCtcTt77AY.116.10.00218
ORF1ab/nsp3340P340SCctTct77AY.120.20.008997
ORF1ab/nsp3340P340SCctTct77AY.16.10.003289
ORF1ab/nsp3340P340LcCtcTt77AY.200.000272
ORF1ab/nsp3340P340SCctTct77AY.260.000198
ORF1ab/nsp3340P340SCctTct77AY.370.002212
ORF1ab/nsp3340P340SCctTct77AY.39.10.000277
ORF1ab/nsp3340P340HcCtcAt77AY.430.000031
ORF1ab/nsp3340P340HcCtcAt77AY.440.000043
ORF1ab/nsp3340P340LcCtcTt77AY.50.000145
ORF1ab/nsp3340P340LcCtcTt77AY.550.006422
ORF1ab/nsp3340P340SCctTct77AY.9.20.000257
ORF1ab/nsp3340P340LcCtcTt77AY.980.000553
ORF1ab/nsp3340P340LcCtcTt77AY.98.10.000339
ORF1ab/nsp3340P340HcCtcAt77B.10.000064
ORF1ab/nsp3340P340TCctAct77B.10.000064
ORF1ab/nsp3340P340PccTccC67B.10.000055
ORF1ab/nsp3340P340PccTccA17B.10.000009
ORF1ab/nsp3340P340SCctTct77B.1.1.250.00398
ORF1ab/nsp3340P340SCctTct77B.1.1.3720.004821
ORF1ab/nsp3340P340SCctTct77B.1.177.770.005084
ORF1ab/nsp3340P340PccTccC77B.1.20.000062
ORF1ab/nsp3340P340SCctTct77B.1.360.001021
ORF1ab/nsp3340P340SCctTct77B.1.4000.003003
ORF1ab/nsp3340P340LcCtcTt77P.1.140.000335
ORF1ab/nsp3340P340PccTccA360.166667
ORF1ab/nsp3340P340PccTccC360.166667
ORF1ab/nsp3340P340TCctAct360.166667
ORF1ab/nsp3340P340TCcTAcA260.111111
ORF1ab/nsp3340P340TCcTAcC160.055556
ORF1ab/nsp3340P340QcCTcAG56All0.000001
ORF1ab/nsp3340P340QcCTcAA16All0
ORF1ab/nsp3340P340PccTccC66AY.1000.000276
ORF1ab/nsp3340P340LcCtcTt66AY.1130.000854
ORF1ab/nsp3340P340SCctTct66AY.120.10.001926
ORF1ab/nsp3340P340LcCtcTt66AY.610.000629
ORF1ab/nsp3340P340LcCtcTt66AY.7.10.000676
ORF1ab/nsp3340P340LcCtcTt66AY.720.008163
ORF1ab/nsp3340P340SCctTct66AY.800.006772
ORF1ab/nsp3340P340SCctTct66B.1.1.330.002525
ORF1ab/nsp3340P340delCCT---66B.1.1.70.000005
ORF1ab/nsp3340P340SCctTct66B.1.177.170.004926
ORF1ab/nsp3340P340LcCtcTt66B.1.3510.000178
ORF1ab/nsp3340P340SCctTct66B.1.438.10.000644
ORF1ab/nsp3340P340LcCtcTt66B.1.5640.002555
ORF1ab/nsp3340P340LcCtcTt66B.1.5760.00544
ORF1ab/nsp3340P340SCctTct66B.1.617.10.000774
ORF1ab/nsp3340P340SCctTct66B.400.002186
ORF1ab/nsp3340P340ACcTGcG36P.10.000047
ORF1ab/nsp3340P340ACctGct36P.10.000047
ORF1ab/nsp3340P340LcCtcTt66Q.10.000758
ORF1ab/nsp3340P340LcCtcTt350.166667
ORF1ab/nsp3340P340LcCTcTC250.111111
ORF1ab/nsp3340P340FCCtTTt45All0.000001
ORF1ab/nsp3340P340VCCtGTt35All0.000001
ORF1ab/nsp3340P340VCCTGTG25All0
ORF1ab/nsp3340P340FCCTTTC15All0
ORF1ab/nsp3340P340SCctTct55AY.1100.000563
ORF1ab/nsp3340P340SCctTct55AY.230.000349
ORF1ab/nsp3340P340SCctTct55AY.280.009452
ORF1ab/nsp3340P340SCctTct55AY.330.000334
ORF1ab/nsp3340P340SCctTct55AY.340.000485
ORF1ab/nsp3340P340LcCtcTt55AY.340.000485
ORF1ab/nsp3340P340SCctTct55AY.4.20.000108
ORF1ab/nsp3340P340SCctTct55AY.420.000201
ORF1ab/nsp3340P340LcCtcTt55AY.46.60.000361
ORF1ab/nsp3340P340LcCtcTt55B.1.1.1280.035461
ORF1ab/nsp3340P340SCctTct55B.1.1.2630.007788
ORF1ab/nsp3340P340SCctTct55B.1.1.280.001556
ORF1ab/nsp3340P340SCctTct55B.1.177.520.008787
ORF1ab/nsp3340P340LcCtcTt55B.1.214.20.002998
ORF1ab/nsp3340P340LcCtcTt55B.1.2340.00066
ORF1ab/nsp3340P340SCctTct55B.1.2580.000333
ORF1ab/nsp3340P340LcCtcTt55B.1.36.290.002587
ORF1ab/nsp3340P340LcCtcTt55B.1.5090.004329
ORF1ab/nsp3340P340LcCtcTt55B.1.5880.00455
ORF1ab/nsp3340P340LcCtcTt55B.1.5960.000436
ORF1ab/nsp3340P340LcCtcTt55B.1.5970.023148
ORF1ab/nsp3340P340LcCtcTt55B.1.617.10.000645
ORF1ab/nsp3340P340delCCT---55B.1.617.20.000019
ORF1ab/nsp3340P340SCctTct55B.1.6370.000365
ORF1ab/nsp3340P340QcCTcAG45P.10.000063
ORF1ab/nsp3340P340RcCTcGG25P.10.000032
ORF1ab/nsp3340P340RcCtcGt15P.10.000016
ORF1ab/nsp3340P340QcCTcAA15P.10.000016
ORF1ab/nsp3340P340RcCTcGC15P.10.000016
ORF1ab/nsp3340P340RcCTcGA15P.10.000016
ORF1ab/nsp3340P340SCctTct240.111111
ORF1ab/nsp3340P340SCcTTcC240.111111
ORF1ab/nsp3340P340del1ccTcc-44All0.000001
ORF1ab/nsp3340P340SCctTct44AY.1130.00057
ORF1ab/nsp3340P340LcCtcTt44AY.270.000259
ORF1ab/nsp3340P340SCctTct44AY.3.10.000341
ORF1ab/nsp3340P340PccTccC44AY.40.000006
ORF1ab/nsp3340P340LcCtcTt44AY.4.2.10.000596
ORF1ab/nsp3340P340SCctTct44AY.4.50.00043
ORF1ab/nsp3340P340LcCtcTt44AY.420.000161
ORF1ab/nsp3340P340SCctTct44AY.480.00186
ORF1ab/nsp3340P340SCctTct44AY.540.000381
ORF1ab/nsp3340P340LcCtcTt44AY.650.002132
ORF1ab/nsp3340P340LcCtcTt44AY.750.000224
ORF1ab/nsp3340P340SCctTct44AY.910.002922
ORF1ab/nsp3340P340LcCtcTt44AY.950.003044
ORF1ab/nsp3340P340LcCtcTt44B.1.1.2070.004728
ORF1ab/nsp3340P340RcCtcGt44B.1.1.70.000004
ORF1ab/nsp3340P340LcCtcTt44B.1.177.440.002076
ORF1ab/nsp3340P340LcCtcTt44B.1.3980.011905
ORF1ab/nsp3340P340SCctTct44B.1.4990.004202
ORF1ab/nsp3340P340SCctTct44B.1.621.10.002023
ORF1ab/nsp3340P340LcCtcTt44C.180.010363
ORF1ab/nsp3340P340SCctTct44C.36.30.002269
ORF1ab/nsp3340P340WCCTTGG33All0.000001
ORF1ab/nsp3340P340ICCtATt23All0
ORF1ab/nsp3340P340ICCTATC13All0
ORF1ab/nsp3340P340LcCtcTt33AT.10.015385
ORF1ab/nsp3340P340SCctTct33AY.10.001187
ORF1ab/nsp3340P340TCctAct33AY.1030.000019
ORF1ab/nsp3340P340SCctTct33AY.1080.003308
ORF1ab/nsp3340P340SCctTct33AY.1170.000254
ORF1ab/nsp3340P340SCctTct33AY.1180.000188
ORF1ab/nsp3340P340LcCtcTt33AY.1210.000406
ORF1ab/nsp3340P340SCctTct33AY.1210.000406
ORF1ab/nsp3340P340LcCtcTt33AY.230.000209
ORF1ab/nsp3340P340HcCtcAt33AY.30.00003
ORF1ab/nsp3340P340SCctTct33AY.34.10.00153
ORF1ab/nsp3340P340SCctTct33AY.350.000699
ORF1ab/nsp3340P340SCctTct33AY.380.001498
ORF1ab/nsp3340P340HcCtcAt33AY.390.000074
ORF1ab/nsp3340P340PccTccC23AY.390.000049
ORF1ab/nsp3340P340PccTccG13AY.390.000025
ORF1ab/nsp3340P340SCctTct33AY.39.20.004622
ORF1ab/nsp3340P340HcCtcAt33AY.4.20.000065
ORF1ab/nsp3340P340PccTccC33AY.4.2.10.000447
ORF1ab/nsp3340P340LcCtcTt33AY.4.40.001227
ORF1ab/nsp3340P340LcCtcTt33AY.4.50.000322
ORF1ab/nsp3340P340PccTccC33AY.440.000018
ORF1ab/nsp3340P340SCctTct33AY.450.000365
ORF1ab/nsp3340P340SCctTct33AY.46.60.000217
ORF1ab/nsp3340P340SCctTct33AY.70.000588
ORF1ab/nsp3340P340LcCtcTt33AY.730.001996
ORF1ab/nsp3340P340LcCtcTt33AY.740.000347
ORF1ab/nsp3340P340SCctTct33AY.75.10.000541
ORF1ab/nsp3340P340LcCtcTt33AY.790.003632
ORF1ab/nsp3340P340SCctTct33AY.870.002498
ORF1ab/nsp3340P340HcCtcAt33AY.880.002653
ORF1ab/nsp3340P340SCctTct33AY.9.10.000251
ORF1ab/nsp3340P340LcCtcTt33AY.9.20.00011
ORF1ab/nsp3340P340SCctTct33AY.950.002283
ORF1ab/nsp3340P340LcCtcTt33AY.99.20.000276
ORF1ab/nsp3340P340LcCtcTt33B.1.1.10.00098
ORF1ab/nsp3340P340PccTccC33B.1.1.2160.002671
ORF1ab/nsp3340P340LcCtcTt33B.1.1.250.001706
ORF1ab/nsp3340P340SCctTct33B.1.1.2550.009091
ORF1ab/nsp3340P340SCctTct33B.1.1.500.002037
ORF1ab/nsp3340P340LcCtcTt33B.1.160.160.002788
ORF1ab/nsp3340P340LcCtcTt33B.1.160.320.012876
ORF1ab/nsp3340P340SCctTct33B.1.177.210.000229
ORF1ab/nsp3340P340SCctTct33B.1.177.570.000843
ORF1ab/nsp3340P340SCctTct33B.1.177.810.000568
ORF1ab/nsp3340P340LcCtcTt33B.1.2320.001612
ORF1ab/nsp3340P340LcCtcTt33B.1.3690.000856
ORF1ab/nsp3340P340SCctTct33B.1.3690.000856
ORF1ab/nsp3340P340LcCtcTt33B.1.3960.002117
ORF1ab/nsp3340P340PccTccC33B.1.4060.018182
ORF1ab/nsp3340P340LcCtcTt33B.1.5950.000783
ORF1ab/nsp3340P340LcCtcTt33B.1.6180.012097
ORF1ab/nsp3340P340LcCtcTt33B.1.6230.001609
ORF1ab/nsp3340P340LcCtcTt33B.1.6370.000219
ORF1ab/nsp3340P340HcCtcAt33P.10.000047
ORF1ab/nsp3340P340delCCT---33P.1.140.000143
ORF1ab/nsp3340P340PccTccC33P.60.009434
ORF1ab/nsp3340P340SCctTct33Q.10.000379
ORF1ab/nsp3340P340LcCtcTt33Q.80.000495
ORF1ab/nsp3340P340VCCtGTt220.111111
ORF1ab/nsp3340P340delCCT---220.111111
ORF1ab/nsp3340P340FCCtTTt120.055556
ORF1ab/nsp3340P340FCCTTTC120.055556
ORF1ab/nsp3340P340ICCTATC120.055556
ORF1ab/nsp3340P340ICCtATt120.055556
ORF1ab/nsp3340P340ACcTGcC120.055556
ORF1ab/nsp3340P340ACctGct120.055556
ORF1ab/nsp3340P340LcCtcTt22AL.10.025974
ORF1ab/nsp3340P340ECCTGAG22All0
ORF1ab/nsp3340P340DCCtGAt22All0
ORF1ab/nsp3340P340CCCtTGt22All0
ORF1ab/nsp3340P340HcCtcAt22AY.1030.000012
ORF1ab/nsp3340P340LcCtcTt22AY.1040.003968
ORF1ab/nsp3340P340LcCtcTt22AY.1060.00067
ORF1ab/nsp3340P340LcCtcTt22AY.1110.000366
ORF1ab/nsp3340P340LcCtcTt22AY.1140.000462
ORF1ab/nsp3340P340LcCtcTt22AY.1160.000574
ORF1ab/nsp3340P340SCctTct22AY.120.000632
ORF1ab/nsp3340P340SCctTct22AY.140.000176
ORF1ab/nsp3340P340LcCtcTt22AY.160.000759
ORF1ab/nsp3340P340SCctTct22AY.160.000759
ORF1ab/nsp3340P340LcCtcTt22AY.180.020202
ORF1ab/nsp3340P340SCctTct22AY.190.002281
ORF1ab/nsp3340P340PccTccC22AY.29.10.000441
ORF1ab/nsp3340P340TCctAct22AY.30.00002
ORF1ab/nsp3340P340HcCtcAt22AY.3.10.000171
ORF1ab/nsp3340P340TCctAct22AY.340.000194
ORF1ab/nsp3340P340PccTccC22AY.340.000194
ORF1ab/nsp3340P340LcCtcTt22AY.370.000632
ORF1ab/nsp3340P340TCctAct22AY.390.000049
ORF1ab/nsp3340P340LcCtcTt22AY.39.10.000079
ORF1ab/nsp3340P340SCctTct22AY.39.1.10.001449
ORF1ab/nsp3340P340delCCT---22AY.40.000003
ORF1ab/nsp3340P340SCctTct22AY.400.001929
ORF1ab/nsp3340P340SCctTct22AY.410.000588
ORF1ab/nsp3340P340PccTccA22AY.420.00008
ORF1ab/nsp3340P340del1ccTcc-22AY.440.000012
ORF1ab/nsp3340P340LcCtcTt22AY.46.10.002053
ORF1ab/nsp3340P340LcCtcTt22AY.46.20.001271
ORF1ab/nsp3340P340LcCtcTt22AY.46.30.001867
ORF1ab/nsp3340P340SCctTct22AY.5.30.000675
ORF1ab/nsp3340P340TCctAct22AY.610.00021
ORF1ab/nsp3340P340SCctTct22AY.610.00021
ORF1ab/nsp3340P340SCctTct22AY.620.000871
ORF1ab/nsp3340P340SCctTct22AY.7.20.001119
ORF1ab/nsp3340P340SCctTct22AY.700.000417
ORF1ab/nsp3340P340SCctTct22AY.850.000854
ORF1ab/nsp3340P340LcCtcTt22AY.890.009804
ORF1ab/nsp3340P340LcCtcTt22AY.920.000575
ORF1ab/nsp3340P340SCctTct22AY.990.002099
ORF1ab/nsp3340P340SCctTct22AY.99.10.003106
ORF1ab/nsp3340P340SCctTct22B0.000256
ORF1ab/nsp3340P340TCctAct22B0.000256
ORF1ab/nsp3340P340SCctTct22B.1.1.10.000653
ORF1ab/nsp3340P340LcCtcTt22B.1.1.1700.002494
ORF1ab/nsp3340P340SCctTct22B.1.1.1760.000879
ORF1ab/nsp3340P340SCctTct22B.1.1.3060.000877
ORF1ab/nsp3340P340LcCtcTt22B.1.1.3180.000604
ORF1ab/nsp3340P340LcCtcTt22B.1.1.330.000842
ORF1ab/nsp3340P340SCctTct22B.1.1.3480.001592
ORF1ab/nsp3340P340SCctTct22B.1.1.3540.008772
ORF1ab/nsp3340P340SCctTct22B.1.1.3680.006173
ORF1ab/nsp3340P340LcCtcTt22B.1.1.3720.001377
ORF1ab/nsp3340P340SCctTct22B.1.1.3980.006452
ORF1ab/nsp3340P340TCctAct22B.1.1.70.000002
ORF1ab/nsp3340P340LcCtcTt22B.1.110.30.001437
ORF1ab/nsp3340P340RcCtcGt22B.1.1600.000062
ORF1ab/nsp3340P340LcCtcTt22B.1.160.120.012821
ORF1ab/nsp3340P340SCctTct22B.1.177.180.00232
ORF1ab/nsp3340P340LcCtcTt22B.1.177.230.006472
ORF1ab/nsp3340P340LcCtcTt22B.1.177.430.002954
ORF1ab/nsp3340P340LcCtcTt22B.1.177.520.003515
ORF1ab/nsp3340P340LcCtcTt22B.1.177.810.000379
ORF1ab/nsp3340P340LcCtcTt22B.1.177.860.000367
ORF1ab/nsp3340P340LcCtcTt22B.1.177.870.001456
ORF1ab/nsp3340P340FCCtTTt22B.1.20.000018
ORF1ab/nsp3340P340HcCtcAt22B.1.20.000018
ORF1ab/nsp3340P340TCctAct22B.1.20.000018
ORF1ab/nsp3340P340LcCtcTt22B.1.258.140.001961
ORF1ab/nsp3340P340LcCtcTt22B.1.3230.041667
ORF1ab/nsp3340P340SCctTct22B.1.36.170.000988
ORF1ab/nsp3340P340LcCtcTt22B.1.36.180.00084
ORF1ab/nsp3340P340SCctTct22B.1.36.350.005208
ORF1ab/nsp3340P340LcCtcTt22B.1.3670.001585
ORF1ab/nsp3340P340LcCtcTt22B.1.3990.003868
ORF1ab/nsp3340P340LcCtcTt22B.1.4000.000858
ORF1ab/nsp3340P340LcCtcTt22B.1.4040.002604
ORF1ab/nsp3340P340SCctTct22B.1.4700.002809
ORF1ab/nsp3340P340SCctTct22B.1.5250.000226
ORF1ab/nsp3340P340SCctTct22B.1.5750.000607
ORF1ab/nsp3340P340TCctAct22B.1.5820.000981
ORF1ab/nsp3340P340SCctTct22B.1.6090.000959
ORF1ab/nsp3340P340delCCT---22B.1.6210.000177
ORF1ab/nsp3340P340LcCtcTt22B.1.930.001867
ORF1ab/nsp3340P340SCctTct22B.1.930.001867
ORF1ab/nsp3340P340LcCtcTt22B.4.70.020202
ORF1ab/nsp3340P340SCctTct22C.360.001821
ORF1ab/nsp3340P340LcCtcTt22C.360.001821
ORF1ab/nsp3340P340LcCtcTt22C.36.30.001134
ORF1ab/nsp3340P340LcCtcTt22C.370.000232
ORF1ab/nsp3340P340VCCTGTG22P.10.000032
ORF1ab/nsp3340P340DCCtGAt22P.10.000032
ORF1ab/nsp3340P340ECCTGAG22P.10.000032
ORF1ab/nsp3340P340SCctTct22P.1.140.000096
ORF1ab/nsp3340P340delCCT---22P.1.70.000639
ORF1ab/nsp3340P340SCctTct22P.30.00319
ORF1ab/nsp3340P340SCctTct22R.10.00018
ORF1ab/nsp3340P340HcCtcAt110.055556
ORF1ab/nsp3340P340TCctAct11A0.000387
ORF1ab/nsp3340P340SCctTct11A0.000387
ORF1ab/nsp3340P340SCctTct11A.10.000282
ORF1ab/nsp3340P340SCctTct11A.50.001923
ORF1ab/nsp3340P340LcCtcTt11AD.20.000219
ORF1ab/nsp3340P340LcCtcTt11AE.80.000489
ORF1ab/nsp3340P340LcCtcTt11AF.10.037037
ORF1ab/nsp3340P340SCctTct11AH.30.003802
ORF1ab/nsp3340P340YCCtTAt11All0
ORF1ab/nsp3340P340HcCtcAt11AY.1000.000046
ORF1ab/nsp3340P340HcCtcAt11AY.1020.000027
ORF1ab/nsp3340P340SCctTct11AY.1040.001984
ORF1ab/nsp3340P340TCctAct11AY.1050.000643
ORF1ab/nsp3340P340LcCtcTt11AY.1080.001103
ORF1ab/nsp3340P340SCctTct11AY.1090.00074
ORF1ab/nsp3340P340delCCT---11AY.1130.000142
ORF1ab/nsp3340P340RcCtcGt11AY.1130.000142
ORF1ab/nsp3340P340SCctTct11AY.1140.000231
ORF1ab/nsp3340P340delCCT---11AY.1190.000035
ORF1ab/nsp3340P340ACctGct11AY.1190.000035
ORF1ab/nsp3340P340LcCtcTt11AY.120.000316
ORF1ab/nsp3340P340HcCtcAt11AY.1200.000037
ORF1ab/nsp3340P340PccTccC11AY.1200.000037
ORF1ab/nsp3340P340SCctTct11AY.120.2.10.000498
ORF1ab/nsp3340P340HcCtcAt11AY.1210.000135
ORF1ab/nsp3340P340HcCtcAt11AY.200.000039
ORF1ab/nsp3340P340delCCT---11AY.230.00007
ORF1ab/nsp3340P340TCctAct11AY.230.00007
ORF1ab/nsp3340P340PccTccC11AY.230.00007
ORF1ab/nsp3340P340ICCtATt11AY.230.00007
ORF1ab/nsp3340P340SCctTct11AY.240.000431
ORF1ab/nsp3340P340LcCtcTt11AY.240.000431
ORF1ab/nsp3340P340delCCT---11AY.240.000431
ORF1ab/nsp3340P340PccTccC11AY.250.000006
ORF1ab/nsp3340P340delCCT---11AY.250.000006
ORF1ab/nsp3340P340delCCT---11AY.260.000028
ORF1ab/nsp3340P340PccTccC11AY.290.000016
ORF1ab/nsp3340P340TCctAct11AY.290.000016
ORF1ab/nsp3340P340SCctTct11AY.29.10.000221
ORF1ab/nsp3340P340LcCtcTt11AY.29.10.000221
ORF1ab/nsp3340P340PccTccC11AY.30.00001
ORF1ab/nsp3340P340SCctTct11AY.300.000396
ORF1ab/nsp3340P340LcCtcTt11AY.380.000499
ORF1ab/nsp3340P340ACctGct11AY.40.000002
ORF1ab/nsp3340P340SCctTct11AY.4.10.000737
ORF1ab/nsp3340P340PccTccC11AY.4.20.000022
ORF1ab/nsp3340P340SCctTct11AY.4.40.000409
ORF1ab/nsp3340P340delCCT---11AY.4.50.000107
ORF1ab/nsp3340P340LcCtcTt11AY.400.000964
ORF1ab/nsp3340P340delCCT---11AY.430.000004
ORF1ab/nsp3340P340CCCtTGt11AY.430.000004
ORF1ab/nsp3340P340WCCTTGG11AY.430.000004
ORF1ab/nsp3340P340PccTccC11AY.430.000004
ORF1ab/nsp3340P340delCCT---11AY.440.000006
ORF1ab/nsp3340P340TCctAct11AY.450.000122
ORF1ab/nsp3340P340SCctTct11AY.46.20.000635
ORF1ab/nsp3340P340LcCtcTt11AY.46.40.000165
ORF1ab/nsp3340P340PccTccC11AY.46.40.000165
ORF1ab/nsp3340P340SCctTct11AY.46.50.000198
ORF1ab/nsp3340P340HcCtcAt11AY.480.000465
ORF1ab/nsp3340P340LcCtcTt11AY.480.000465
ORF1ab/nsp3340P340PccTccC11AY.50.000021
ORF1ab/nsp3340P340SCctTct11AY.5.40.000277
ORF1ab/nsp3340P340SCctTct11AY.520.000814
ORF1ab/nsp3340P340SCctTct11AY.530.000288
ORF1ab/nsp3340P340HcCtcAt11AY.550.000917
ORF1ab/nsp3340P340SCctTct11AY.560.001605
ORF1ab/nsp3340P340LcCtcTt11AY.580.000907
ORF1ab/nsp3340P340SCctTct11AY.60.000041
ORF1ab/nsp3340P340SCctTct11AY.600.000938
ORF1ab/nsp3340P340PccTccC11AY.620.000436
ORF1ab/nsp3340P340delCCT---11AY.670.000464
ORF1ab/nsp3340P340PccTccA11AY.670.000464
ORF1ab/nsp3340P340LcCtcTt11AY.70.000196
ORF1ab/nsp3340P340SCctTct11AY.710.000475
ORF1ab/nsp3340P340SCctTct11AY.740.000116
ORF1ab/nsp3340P340TCctAct11AY.750.000056
ORF1ab/nsp3340P340LcCtcTt11AY.75.10.00018
ORF1ab/nsp3340P340HcCtcAt11AY.75.10.00018
ORF1ab/nsp3340P340LcCtcTt11AY.780.001541
ORF1ab/nsp3340P340delCCT---11AY.840.000437
ORF1ab/nsp3340P340LcCtcTt11AY.840.000437
ORF1ab/nsp3340P340LcCtcTt11AY.850.000427
ORF1ab/nsp3340P340LcCtcTt11AY.860.00083
ORF1ab/nsp3340P340LcCtcTt11AY.880.000884
ORF1ab/nsp3340P340SCctTct11AY.90.000068
ORF1ab/nsp3340P340LcCtcTt11AY.900.000684
ORF1ab/nsp3340P340TCctAct11AY.930.000273
ORF1ab/nsp3340P340PccTccC11AY.980.000079
ORF1ab/nsp3340P340SCctTct11AY.98.10.000048
ORF1ab/nsp3340P340delCCT---11AY.990.001049
ORF1ab/nsp3340P340SCctTct11AY.99.20.000092
ORF1ab/nsp3340P340SCctTct11AZ.10.000867
ORF1ab/nsp3340P340PccTccC11B0.000128
ORF1ab/nsp3340P340RcCtcGt11B.10.000009
ORF1ab/nsp3340P340QcCTcAG11B.10.000009
ORF1ab/nsp3340P340WCCTTGG11B.10.000009
ORF1ab/nsp3340P340ACctGct11B.10.000009
ORF1ab/nsp3340P340FCCtTTt11B.10.000009
ORF1ab/nsp3340P340VCCtGTt11B.1.10.000018
ORF1ab/nsp3340P340HcCtcAt11B.1.10.000018
ORF1ab/nsp3340P340delCCT---11B.1.10.000018
ORF1ab/nsp3340P340PccTccA11B.1.1.10.000327
ORF1ab/nsp3340P340LcCtcTt11B.1.1.100.001115
ORF1ab/nsp3340P340HcCtcAt11B.1.1.1210.002427
ORF1ab/nsp3340P340TCctAct11B.1.1.1530.001095
ORF1ab/nsp3340P340SCctTct11B.1.1.1530.001095
ORF1ab/nsp3340P340LcCtcTt11B.1.1.1610.003534
ORF1ab/nsp3340P340LcCtcTt11B.1.1.1890.001513
ORF1ab/nsp3340P340LcCtcTt11B.1.1.2160.00089
ORF1ab/nsp3340P340HcCtcAt11B.1.1.2220.000204
ORF1ab/nsp3340P340SCctTct11B.1.1.2400.004695
ORF1ab/nsp3340P340SCctTct11B.1.1.2430.004082
ORF1ab/nsp3340P340PccTccC11B.1.1.2680.014925
ORF1ab/nsp3340P340LcCtcTt11B.1.1.270.00565
ORF1ab/nsp3340P340SCctTct11B.1.1.2740.005051
ORF1ab/nsp3340P340SCctTct11B.1.1.2770.000759
ORF1ab/nsp3340P340PccTccC11B.1.1.280.000311
ORF1ab/nsp3340P340LcCtcTt11B.1.1.2820.011628
ORF1ab/nsp3340P340SCctTct11B.1.1.2850.006536
ORF1ab/nsp3340P340LcCtcTt11B.1.1.2940.001266
ORF1ab/nsp3340P340LcCtcTt11B.1.1.2980.000862
ORF1ab/nsp3340P340LcCtcTt11B.1.1.3050.003861
ORF1ab/nsp3340P340delCCT---11B.1.1.3060.000438
ORF1ab/nsp3340P340SCctTct11B.1.1.3110.000358
ORF1ab/nsp3340P340LcCtcTt11B.1.1.3160.000925
ORF1ab/nsp3340P340LcCtcTt11B.1.1.3170.000412
ORF1ab/nsp3340P340SCctTct11B.1.1.3180.000302
ORF1ab/nsp3340P340LcCtcTt11B.1.1.3260.001761
ORF1ab/nsp3340P340delCCT---11B.1.1.330.000421
ORF1ab/nsp3340P340LcCtcTt11B.1.1.3480.000796
ORF1ab/nsp3340P340delCCT---11B.1.1.3480.000796
ORF1ab/nsp3340P340SCctTct11B.1.1.3510.002793
ORF1ab/nsp3340P340LcCtcTt11B.1.1.3800.009804
ORF1ab/nsp3340P340SCctTct11B.1.1.3890.006061
ORF1ab/nsp3340P340LcCtcTt11B.1.1.4070.041667
ORF1ab/nsp3340P340SCctTct11B.1.1.4160.000905
ORF1ab/nsp3340P340SCctTct11B.1.1.4280.009434
ORF1ab/nsp3340P340LcCtcTt11B.1.1.4320.001266
ORF1ab/nsp3340P340HcCtcAt11B.1.1.4400.011765
ORF1ab/nsp3340P340LcCtcTt11B.1.1.4420.018519
ORF1ab/nsp3340P340LcCtcTt11B.1.1.450.014085
ORF1ab/nsp3340P340SCctTct11B.1.1.4640.001473
ORF1ab/nsp3340P340LcCtcTt11B.1.1.4640.001473
ORF1ab/nsp3340P340SCctTct11B.1.1.4660.008696
ORF1ab/nsp3340P340SCctTct11B.1.1.4850.016667
ORF1ab/nsp3340P340del1ccTcc-11B.1.1.5190.00004
ORF1ab/nsp3340P340LcCtcTt11B.1.1.5210.005348
ORF1ab/nsp3340P340LcCtcTt11B.1.1.5230.001563
ORF1ab/nsp3340P340SCctTct11B.1.1.540.003021
ORF1ab/nsp3340P340ACctGct11B.1.1.70.000001
ORF1ab/nsp3340P340del1ccTcc-11B.1.1.70.000001
ORF1ab/nsp3340P340delCCT---11B.1.110.30.000718
ORF1ab/nsp3340P340SCctTct11B.1.110.30.000718
ORF1ab/nsp3340P340LcCtcTt11B.1.1110.001175
ORF1ab/nsp3340P340LcCtcTt11B.1.1460.004237
ORF1ab/nsp3340P340SCctTct11B.1.1460.004237
ORF1ab/nsp3340P340SCctTct11B.1.1570.002985
ORF1ab/nsp3340P340LcCtcTt11B.1.1580.02381
ORF1ab/nsp3340P340delCCT---11B.1.1600.000031
ORF1ab/nsp3340P340LcCtcTt11B.1.160.110.005714
ORF1ab/nsp3340P340PccTccC11B.1.160.160.000929
ORF1ab/nsp3340P340SCctTct11B.1.160.260.002421
ORF1ab/nsp3340P340PccTccC11B.1.160.80.001289
ORF1ab/nsp3340P340SCctTct11B.1.177.160.000664
ORF1ab/nsp3340P340LcCtcTt11B.1.177.180.00116
ORF1ab/nsp3340P340ACctGct11B.1.177.240.001295
ORF1ab/nsp3340P340LcCtcTt11B.1.177.40.000211
ORF1ab/nsp3340P340PccTccC11B.1.177.40.000211
ORF1ab/nsp3340P340SCctTct11B.1.177.440.000519
ORF1ab/nsp3340P340PccTccC11B.1.177.440.000519
ORF1ab/nsp3340P340LcCtcTt11B.1.177.560.000668
ORF1ab/nsp3340P340PccTccC11B.1.177.60.000977
ORF1ab/nsp3340P340SCctTct11B.1.177.600.000218
ORF1ab/nsp3340P340LcCtcTt11B.1.177.620.001192
ORF1ab/nsp3340P340HcCtcAt11B.1.177.70.000165
ORF1ab/nsp3340P340TCctAct11B.1.177.70.000165
ORF1ab/nsp3340P340SCctTct11B.1.177.830.001481
ORF1ab/nsp3340P340SCctTct11B.1.1790.003759
ORF1ab/nsp3340P340SCctTct11B.1.1940.04
ORF1ab/nsp3340P340ACctGct11B.1.20.000009
ORF1ab/nsp3340P340LcCtcTt11B.1.2100.002132
ORF1ab/nsp3340P340delCCT---11B.1.2180.005155
ORF1ab/nsp3340P340LcCtcTt11B.1.2220.001692
ORF1ab/nsp3340P340SCctTct11B.1.2220.001692
ORF1ab/nsp3340P340SCctTct11B.1.2320.000537
ORF1ab/nsp3340P340LcCtcTt11B.1.2390.001221
ORF1ab/nsp3340P340LcCtcTt11B.1.2400.000216
ORF1ab/nsp3340P340HcCtcAt11B.1.2580.000067
ORF1ab/nsp3340P340LcCtcTt11B.1.258.110.000396
ORF1ab/nsp3340P340LcCtcTt11B.1.258.170.000104
ORF1ab/nsp3340P340LcCtcTt11B.1.258.30.001675
ORF1ab/nsp3340P340LcCtcTt11B.1.258.70.001912
ORF1ab/nsp3340P340SCctTct11B.1.3110.000275
ORF1ab/nsp3340P340LcCtcTt11B.1.3110.000275
ORF1ab/nsp3340P340SCctTct11B.1.3200.001245
ORF1ab/nsp3340P340LcCtcTt11B.1.3320.003497
ORF1ab/nsp3340P340SCctTct11B.1.3440.008197
ORF1ab/nsp3340P340SCctTct11B.1.351.20.000303
ORF1ab/nsp3340P340delCCT---11B.1.360.000146
ORF1ab/nsp3340P340SCctTct11B.1.36.20.010753
ORF1ab/nsp3340P340SCctTct11B.1.36.290.000517
ORF1ab/nsp3340P340SCctTct11B.1.36.360.000602
ORF1ab/nsp3340P340TCctAct11B.1.36.360.000602
ORF1ab/nsp3340P340SCctTct11B.1.3770.004566
ORF1ab/nsp3340P340LcCtcTt11B.1.3800.006623
ORF1ab/nsp3340P340LcCtcTt11B.1.3890.001002
ORF1ab/nsp3340P340SCctTct11B.1.3890.001002
ORF1ab/nsp3340P340SCctTct11B.1.400.10.015152
ORF1ab/nsp3340P340LcCtcTt11B.1.4090.000781
ORF1ab/nsp3340P340SCctTct11B.1.4130.004255
ORF1ab/nsp3340P340SCctTct11B.1.4160.001269
ORF1ab/nsp3340P340LcCtcTt11B.1.4220.000812
ORF1ab/nsp3340P340PccTccC11B.1.4270.00005
ORF1ab/nsp3340P340SCctTct11B.1.4280.00102
ORF1ab/nsp3340P340TCctAct11B.1.4290.000024
ORF1ab/nsp3340P340delCCT---11B.1.4290.000024
ORF1ab/nsp3340P340SCctTct11B.1.429.10.012048
ORF1ab/nsp3340P340SCctTct11B.1.4530.003236
ORF1ab/nsp3340P340TCctAct11B.1.4530.003236
ORF1ab/nsp3340P340LcCtcTt11B.1.4560.003268
ORF1ab/nsp3340P340SCctTct11B.1.4590.004082
ORF1ab/nsp3340P340SCctTct11B.1.466.10.007194
ORF1ab/nsp3340P340LcCtcTt11B.1.4680.005714
ORF1ab/nsp3340P340LcCtcTt11B.1.4700.001404
ORF1ab/nsp3340P340LcCtcTt11B.1.4730.019231
ORF1ab/nsp3340P340SCctTct11B.1.4970.000315
ORF1ab/nsp3340P340LcCtcTt11B.1.4970.000315
ORF1ab/nsp3340P340LcCtcTt11B.1.4990.00105
ORF1ab/nsp3340P340LcCtcTt11B.1.5250.000113
ORF1ab/nsp3340P340SCctTct11B.1.5540.004405
ORF1ab/nsp3340P340TCctAct11B.1.5740.002151
ORF1ab/nsp3340P340LcCtcTt11B.1.5770.000687
ORF1ab/nsp3340P340SCctTct11B.1.5820.000491
ORF1ab/nsp3340P340delCCT---11B.1.5960.000087
ORF1ab/nsp3340P340LcCtcTt11B.1.6090.000479
ORF1ab/nsp3340P340SCctTct11B.1.6120.002653
ORF1ab/nsp3340P340ACctGct11B.1.617.20.000004
ORF1ab/nsp3340P340SCctTct11B.1.617.30.002985
ORF1ab/nsp3340P340SCctTct11B.1.6210.000089
ORF1ab/nsp3340P340delCCT---11B.1.6270.00202
ORF1ab/nsp3340P340LcCtcTt11B.1.6280.000352
ORF1ab/nsp3340P340SCctTct11B.1.6280.000352
ORF1ab/nsp3340P340HcCtcAt11B.1.6370.000073
ORF1ab/nsp3340P340YCCtTAt11B.1.6370.000073
ORF1ab/nsp3340P340PccTccC11B.1.780.008547
ORF1ab/nsp3340P340TCctAct11B.1.940.027027
ORF1ab/nsp3340P340LcCtcTt11B.400.000364
ORF1ab/nsp3340P340delCCT---11B.570.015152
ORF1ab/nsp3340P340SCctTct11B.60.00091
ORF1ab/nsp3340P340LcCtcTt11B.60.00091
ORF1ab/nsp3340P340LcCtcTt11B.6.60.000889
ORF1ab/nsp3340P340LcCtcTt11B.610.005747
ORF1ab/nsp3340P340SCctTct11C.160.00106
ORF1ab/nsp3340P340SCctTct11C.180.002591
ORF1ab/nsp3340P340LcCtcTt11C.20.016129
ORF1ab/nsp3340P340SCctTct11C.300.001727
ORF1ab/nsp3340P340LcCtcTt11C.350.000774
ORF1ab/nsp3340P340LcCtcTt11C.36.10.004149
ORF1ab/nsp3340P340delCCT---11C.370.000116
ORF1ab/nsp3340P340delCCT---11N.60.007092
ORF1ab/nsp3340P340CCCtTGt11P.10.000016
ORF1ab/nsp3340P340WCCTTGG11P.10.000016
ORF1ab/nsp3340P340LcCtcTt11P.1.100.000269
ORF1ab/nsp3340P340delCCT---11P.1.130.000898
ORF1ab/nsp3340P340SCctTct11P.1.150.000232
ORF1ab/nsp3340P340SCctTct11P.1.40.000977
ORF1ab/nsp3340P340SCctTct11P.20.000187
ORF1ab/nsp3340P340LcCtcTt11P.30.001595
ORF1ab/nsp3340P340SCctTct11Q.20.000613
ORF1ab/nsp3340P340PccTccC11R.10.00009