CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF1ab/nsp3 : CodonNum = 323

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF1ab/nsp3323H323HH1141HsyncaCcaT5236523613686-3688
ORF1ab/nsp3323H323YH1141YnonsynCacTac106810650.9971913686-3688
ORF1ab/nsp3323H323YH1141YnonsynCaCTaT106830.002808993686-3688
ORF1ab/nsp3323H323NH1141NnonsynCacAac3073060.9967433686-3688
ORF1ab/nsp3323H323NH1141NnonsynCaCAaT30710.003257333686-3688
ORF1ab/nsp3323H323RH1141RnonsyncAccGc2102060.9809523686-3688
ORF1ab/nsp3323H323RH1141RnonsyncACcGT21020.009523813686-3688
ORF1ab/nsp3323H323RH1141RnonsynCACAGA21010.00476193686-3688
ORF1ab/nsp3323H323RH1141RnonsyncACcGG21010.00476193686-3688
ORF1ab/nsp3323H323QH1141QnonsyncaCcaA1411210.8581563686-3688
ORF1ab/nsp3323H323QH1141QnonsyncaCcaG141200.1418443686-3688
ORF1ab/nsp3323H323delH1141deldelCAC---10810813686-3688
ORF1ab/nsp3323H323LH1141LnonsyncAccTc430.753686-3688
ORF1ab/nsp3323H323LH1141LnonsyncACcTT410.253686-3688
ORF1ab/nsp3323H323XH1141XnonsynCaCTaA320.6666673686-3688
ORF1ab/nsp3323H323FH1141FnonsynCAcTTc320.6666673686-3688
ORF1ab/nsp3323H323del1H1141del1delcAcc-c310.3333333686-3688
ORF1ab/nsp3323H323del1H1141del1delcaCca-310.3333333686-3688
ORF1ab/nsp3323H323del1H1141del1delCac-ac310.3333333686-3688
ORF1ab/nsp3323H323XH1141XnonsynCaCTaG310.3333333686-3688
ORF1ab/nsp3323H323FH1141FnonsynCACTTT310.3333333686-3688
ORF1ab/nsp3323H323PH1141PnonsyncACcCT2213686-3688
ORF1ab/nsp3323H323SH1141SnonsynCACTCG210.53686-3688
ORF1ab/nsp3323H323SH1141SnonsynCACTCA210.53686-3688
ORF1ab/nsp3323H323TH1141TnonsynCACACG210.53686-3688
ORF1ab/nsp3323H323TH1141TnonsynCACACA210.53686-3688
ORF1ab/nsp3323H323KH1141KnonsynCaCAaG210.53686-3688
ORF1ab/nsp3323H323KH1141KnonsynCaCAaA210.53686-3688
ORF1ab/nsp3323H323DH1141DnonsynCacGac1113686-3688
ORF1ab/nsp3323H323EH1141EnonsynCaCGaA1113686-3688
ORF1ab/nsp3323H323del2H1141del2delCAc--c1113686-3688

Details of the mutation no within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF1ab/nsp3323H323HcaCcaT52365236All0.001001
ORF1ab/nsp3323H323HcaCcaT27692769B.1.6280.975687
ORF1ab/nsp3323H323YCacTac10651068All0.000204
ORF1ab/nsp3323H323YCaCTaT31068All0.000001
ORF1ab/nsp3323H323HcaCcaT556556AY.290.00877
ORF1ab/nsp3323H323YCacTac494494B.1.1.70.000442
ORF1ab/nsp3323H323HcaCcaT408408B.1.1.70.000365
ORF1ab/nsp3323H323HcaCcaT310310AY.430.001373
ORF1ab/nsp3323H323NCacAac306307All0.000059
ORF1ab/nsp3323H323NCaCAaT1307All0
ORF1ab/nsp3323H323RcAccGc206210All0.000039
ORF1ab/nsp3323H323RcACcGT2210All0
ORF1ab/nsp3323H323RcACcGG1210All0
ORF1ab/nsp3323H323RCACAGA1210All0
ORF1ab/nsp3323H323QcaCcaA121141All0.000023
ORF1ab/nsp3323H323QcaCcaG20141All0.000004
ORF1ab/nsp3323H323HcaCcaT132132AY.40.000205
ORF1ab/nsp3323H323RcAccGc129129AY.1190.004555
ORF1ab/nsp3323H323HcaCcaT125125B.10.001145
ORF1ab/nsp3323H323delCAC---108108All0.000021
ORF1ab/nsp3323H323YCacTac9192B.1.617.20.000343
ORF1ab/nsp3323H323YCaCTaT192B.1.617.20.000004
ORF1ab/nsp3323H323HcaCcaT8484AY.440.000511
ORF1ab/nsp3323H323HcaCcaT8484B.1.617.20.000316
ORF1ab/nsp3323H323YCacTac7070AY.40.000109
ORF1ab/nsp3323H323YCacTac6161B.1.20.000537
ORF1ab/nsp3323H323HcaCcaT5858AY.30.000577
ORF1ab/nsp3323H323NCacAac5050B.1.1.70.000045
ORF1ab/nsp3323H323HcaCcaT4747AY.39.10.001862
ORF1ab/nsp3323H323HcaCcaT4747AY.420.001891
ORF1ab/nsp3323H323HcaCcaT4545AY.1030.000279
ORF1ab/nsp3323H323QcaCcaA4242B.1.4290.000988
ORF1ab/nsp3323H323HcaCcaT3939P.10.000614
ORF1ab/nsp3323H323NCacAac3737B.1.617.20.000139
ORF1ab/nsp3323H323YCacTac3232AY.1020.000848
ORF1ab/nsp3323H323HcaCcaT3232B.1.5250.003621
ORF1ab/nsp3323H323YCacTac2929AY.1030.00018
ORF1ab/nsp3323H323YCacTac2828B.1.1.390.014271
ORF1ab/nsp3323H323NCacAac2828Q.10.003537
ORF1ab/nsp3323H323QcaCcaA2626AY.440.000158
ORF1ab/nsp3323H323HcaCcaT2525B.1.20.00022
ORF1ab/nsp3323H323YCacTac2525B.1.258.170.002599
ORF1ab/nsp3323H323HcaCcaT2525B.1.360.003648
ORF1ab/nsp3323H323HcaCcaT2525B.1.4270.001262
ORF1ab/nsp3323H323HcaCcaT2222B.1.5260.000517
ORF1ab/nsp3323H323NCacAac2121B.1.5260.000494
ORF1ab/nsp3323H323delCAC---2121P.1.150.004879
ORF1ab/nsp3323H323NCacAac2020AY.1030.000124
ORF1ab/nsp3323H323NCacAac2020AY.430.000089
ORF1ab/nsp3323H323HcaCcaT1919B.1.10.000345
ORF1ab/nsp3323H323HcaCcaT1919B.1.1600.000593
ORF1ab/nsp3323H323HcaCcaT1919B.1.1770.00025
ORF1ab/nsp3323H323HcaCcaT1818AY.1020.000477
ORF1ab/nsp3323H323HcaCcaT1818AY.250.000108
ORF1ab/nsp3323H323YCacTac1717B.10.000156
ORF1ab/nsp3323H323RcAccGc1617B.10.000147
ORF1ab/nsp3323H323RCACAGA117B.10.000009
ORF1ab/nsp3323H323HcaCcaT1717B.1.4780.2
ORF1ab/nsp3323H323delCAC---1616P.10.000252
ORF1ab/nsp3323H323YCacTac1515B.1.1.871
ORF1ab/nsp3323H323QcaCcaG1515B.1.6210.001328
ORF1ab/nsp3323H323QcaCcaA1414AY.1100.001578
ORF1ab/nsp3323H323NCacAac1313AY.250.000078
ORF1ab/nsp3323H323NCacAac1313AY.98.10.00063
ORF1ab/nsp3323H323YCacTac1212AY.250.000072
ORF1ab/nsp3323H323NCacAac1212AY.40.000019
ORF1ab/nsp3323H323YCacTac1212AY.440.000073
ORF1ab/nsp3323H323HcaCcaT1111AY.390.000272
ORF1ab/nsp3323H323RcAccGc1111B.1.1.70.00001
ORF1ab/nsp3323H323YCacTac1111B.1.177.210.000841
ORF1ab/nsp3323H323RcAccGc1111B.1.617.20.000041
ORF1ab/nsp3323H323delCAC---1010P.1.120.00484
ORF1ab/nsp3323H323YCacTac99AY.30.00009
ORF1ab/nsp3323H323YCacTac99AY.470.00028
ORF1ab/nsp3323H323YCacTac99AY.580.008167
ORF1ab/nsp3323H323QcaCcaA99B.1.1.70.000008
ORF1ab/nsp3323H323NCacAac99B.1.20.000079
ORF1ab/nsp3323H323YCacTac99B.1.3690.002567
ORF1ab/nsp3323H323YCacTac88AY.430.000035
ORF1ab/nsp3323H323HcaCcaT88AY.720.010884
ORF1ab/nsp3323H323delCAC---88B.10.000073
ORF1ab/nsp3323H323YCacTac88B.1.1.5190.000318
ORF1ab/nsp3323H323HcaCcaT88B.1.3110.002197
ORF1ab/nsp3323H323HcaCcaT88B.1.5870.01518
ORF1ab/nsp3323H323HcaCcaT88B.1.617.10.001032
ORF1ab/nsp3323H323HcaCcaT88P.1.120.003872
ORF1ab/nsp3323H323HcaCcaT77AY.1190.000247
ORF1ab/nsp3323H323HcaCcaT77AY.160.002658
ORF1ab/nsp3323H323HcaCcaT77AY.200.000272
ORF1ab/nsp3323H323HcaCcaT77AY.260.000198
ORF1ab/nsp3323H323HcaCcaT77AY.60.000288
ORF1ab/nsp3323H323HcaCcaT77B.1.4290.000165
ORF1ab/nsp3323H323RcAccGc66AY.1030.000037
ORF1ab/nsp3323H323HcaCcaT66AY.1130.000854
ORF1ab/nsp3323H323NCacAac66AY.390.000148
ORF1ab/nsp3323H323HcaCcaT66AY.50.000124
ORF1ab/nsp3323H323YCacTac66AY.9.10.000502
ORF1ab/nsp3323H323QcaCcaA66B.1.1.3320.1875
ORF1ab/nsp3323H323delCAC---66B.1.1.70.000005
ORF1ab/nsp3323H323YCacTac66B.1.1600.000187
ORF1ab/nsp3323H323YCacTac66B.1.5260.000141
ORF1ab/nsp3323H323NCacAac55AY.1020.000133
ORF1ab/nsp3323H323YCacTac55AY.1200.000186
ORF1ab/nsp3323H323HcaCcaT55AY.29.10.001103
ORF1ab/nsp3323H323NCacAac55AY.440.00003
ORF1ab/nsp3323H323HcaCcaT55AY.5.30.001687
ORF1ab/nsp3323H323NCacAac55B.10.000046
ORF1ab/nsp3323H323YCacTac55B.1.10.000091
ORF1ab/nsp3323H323HcaCcaT55B.1.160.120.032051
ORF1ab/nsp3323H323HcaCcaT55B.1.2580.000333
ORF1ab/nsp3323H323HcaCcaT55B.1.3510.000149
ORF1ab/nsp3323H323NCacAac55B.1.3770.022831
ORF1ab/nsp3323H323HcaCcaT55B.1.5960.000436
ORF1ab/nsp3323H323NCacAac55P.10.000079
ORF1ab/nsp3323H323YCacTac45P.10.000063
ORF1ab/nsp3323H323YCaCTaT15P.10.000016
ORF1ab/nsp3323H323NCacAac440.222222
ORF1ab/nsp3323H323LcAccTc34All0.000001
ORF1ab/nsp3323H323LcACcTT14All0
ORF1ab/nsp3323H323HcaCcaT44AY.270.000259
ORF1ab/nsp3323H323HcaCcaT44AY.4.20.000087
ORF1ab/nsp3323H323QcaCcaA24B.10.000018
ORF1ab/nsp3323H323QcaCcaG24B.10.000018
ORF1ab/nsp3323H323RcAccGc44B.1.2430.000278
ORF1ab/nsp3323H323YCacTac44B.1.258.20.018018
ORF1ab/nsp3323H323delCAC---44B.1.6210.000354
ORF1ab/nsp3323H323HcaCcaT44P.1.150.000929
ORF1ab/nsp3323H323HcaCcaT44P.20.000747
ORF1ab/nsp3323H323HcaCcaT44R.10.00036
ORF1ab/nsp3323H323FCAcTTc23All0
ORF1ab/nsp3323H323XCaCTaA23All0
ORF1ab/nsp3323H323del1Cac-ac13All0
ORF1ab/nsp3323H323del1cAcc-c13All0
ORF1ab/nsp3323H323del1caCca-13All0
ORF1ab/nsp3323H323XCaCTaG13All0
ORF1ab/nsp3323H323FCACTTT13All0
ORF1ab/nsp3323H323NCacAac33AY.1190.000106
ORF1ab/nsp3323H323HcaCcaT33AY.230.000209
ORF1ab/nsp3323H323RcAccGc33AY.250.000018
ORF1ab/nsp3323H323HcaCcaT33AY.3.10.000256
ORF1ab/nsp3323H323HcaCcaT33AY.340.000291
ORF1ab/nsp3323H323QcaCcaA33AY.40.000005
ORF1ab/nsp3323H323NCacAac33AY.4.20.000065
ORF1ab/nsp3323H323HcaCcaT33AY.4.50.000322
ORF1ab/nsp3323H323delCAC---33AY.430.000013
ORF1ab/nsp3323H323RcAccGc33AY.430.000013
ORF1ab/nsp3323H323QcaCcaA23AY.430.000009
ORF1ab/nsp3323H323QcaCcaG13AY.430.000004
ORF1ab/nsp3323H323HcaCcaT33AY.46.40.000494
ORF1ab/nsp3323H323YCacTac33AY.630.001161
ORF1ab/nsp3323H323HcaCcaT33AY.98.10.000145
ORF1ab/nsp3323H323QcaCcaA33B.1.10.000054
ORF1ab/nsp3323H323YCacTac33B.1.1.3980.009677
ORF1ab/nsp3323H323HcaCcaT33B.1.1.5190.000119
ORF1ab/nsp3323H323NCacAac33B.1.1600.000094
ORF1ab/nsp3323H323HcaCcaT33B.1.177.210.000229
ORF1ab/nsp3323H323HcaCcaT33B.1.2210.000213
ORF1ab/nsp3323H323HcaCcaT33B.1.2340.000396
ORF1ab/nsp3323H323HcaCcaT33B.1.36.180.001261
ORF1ab/nsp3323H323QcaCcaA33B.1.4270.000151
ORF1ab/nsp3323H323NCacAac33B.1.4270.000151
ORF1ab/nsp3323H323YCacTac33B.60.00273
ORF1ab/nsp3323H323delCAC---33P.1.140.000143
ORF1ab/nsp3323H323YCacTac33P.1.150.000697
ORF1ab/nsp3323H323delCAC---220.111111
ORF1ab/nsp3323H323RcACcGT220.111111
ORF1ab/nsp3323H323PcACcCT220.111111
ORF1ab/nsp3323H323LcAccTc120.055556
ORF1ab/nsp3323H323FCACTTT120.055556
ORF1ab/nsp3323H323YCaCTaT120.055556
ORF1ab/nsp3323H323YCacTac120.055556
ORF1ab/nsp3323H323LcACcTT120.055556
ORF1ab/nsp3323H323FCAcTTc120.055556
ORF1ab/nsp3323H323PcACcCT22All0
ORF1ab/nsp3323H323KCaCAaA12All0
ORF1ab/nsp3323H323KCaCAaG12All0
ORF1ab/nsp3323H323TCACACA12All0
ORF1ab/nsp3323H323SCACTCA12All0
ORF1ab/nsp3323H323TCACACG12All0
ORF1ab/nsp3323H323SCACTCG12All0
ORF1ab/nsp3323H323HcaCcaT22AY.1000.000092
ORF1ab/nsp3323H323YCacTac22AY.1000.000092
ORF1ab/nsp3323H323YCacTac22AY.1140.000462
ORF1ab/nsp3323H323HcaCcaT22AY.1200.000074
ORF1ab/nsp3323H323HcaCcaT22AY.120.10.000642
ORF1ab/nsp3323H323HcaCcaT22AY.16.10.00094
ORF1ab/nsp3323H323YCacTac22AY.230.000139
ORF1ab/nsp3323H323NCacAac22AY.230.000139
ORF1ab/nsp3323H323HcaCcaT22AY.240.000862
ORF1ab/nsp3323H323YCacTac22AY.290.000032
ORF1ab/nsp3323H323NCacAac22AY.30.00002
ORF1ab/nsp3323H323HcaCcaT22AY.330.000134
ORF1ab/nsp3323H323YCacTac22AY.390.000049
ORF1ab/nsp3323H323RcAccGc22AY.40.000003
ORF1ab/nsp3323H323HcaCcaT22AY.450.000243
ORF1ab/nsp3323H323HcaCcaT22AY.46.60.000144
ORF1ab/nsp3323H323YCacTac22AY.480.00093
ORF1ab/nsp3323H323QcaCcaA22AY.50.000041
ORF1ab/nsp3323H323HcaCcaT22AY.90.000135
ORF1ab/nsp3323H323NCacAac22AY.9.10.000167
ORF1ab/nsp3323H323HcaCcaT22AY.980.000158
ORF1ab/nsp3323H323RcACcGG12AY.990.001049
ORF1ab/nsp3323H323RcAccGc12AY.990.001049
ORF1ab/nsp3323H323delCAC---22B.1.10.000036
ORF1ab/nsp3323H323YCacTac22B.1.1.2160.001781
ORF1ab/nsp3323H323HcaCcaT22B.1.1.2220.000408
ORF1ab/nsp3323H323YCacTac22B.1.1.2610.017241
ORF1ab/nsp3323H323HcaCcaT22B.1.1.3030.005525
ORF1ab/nsp3323H323HcaCcaT22B.1.1.3180.000604
ORF1ab/nsp3323H323HcaCcaT22B.1.1.3480.001592
ORF1ab/nsp3323H323RcAccGc22B.1.1.5190.000079
ORF1ab/nsp3323H323KCaCAaA12B.1.1.70.000001
ORF1ab/nsp3323H323XCaCTaA12B.1.1.70.000001
ORF1ab/nsp3323H323SCACTCA12B.1.1.70.000001
ORF1ab/nsp3323H323XCaCTaG12B.1.1.70.000001
ORF1ab/nsp3323H323KCaCAaG12B.1.1.70.000001
ORF1ab/nsp3323H323TCACACA12B.1.1.70.000001
ORF1ab/nsp3323H323TCACACG12B.1.1.70.000001
ORF1ab/nsp3323H323SCACTCG12B.1.1.70.000001
ORF1ab/nsp3323H323YCacTac22B.1.1470.001512
ORF1ab/nsp3323H323YCacTac22B.1.1770.000026
ORF1ab/nsp3323H323YCacTac22B.1.177.810.000379
ORF1ab/nsp3323H323RcAccGc22B.1.20.000018
ORF1ab/nsp3323H323HcaCcaT22B.1.2400.000431
ORF1ab/nsp3323H323HcaCcaT22B.1.4090.001563
ORF1ab/nsp3323H323NCacAac22B.1.4290.000047
ORF1ab/nsp3323H323HcaCcaT22B.1.4320.022472
ORF1ab/nsp3323H323HcaCcaT22B.1.4430.009346
ORF1ab/nsp3323H323HcaCcaT22B.1.466.20.000782
ORF1ab/nsp3323H323HcaCcaT22B.1.5880.00182
ORF1ab/nsp3323H323delCAC---22B.1.5960.000174
ORF1ab/nsp3323H323delCAC---22B.1.617.20.000008
ORF1ab/nsp3323H323HcaCcaT22B.1.6270.00404
ORF1ab/nsp3323H323NCacAac22C.370.000232
ORF1ab/nsp3323H323delCAC---22C.370.000232
ORF1ab/nsp3323H323delCAC---22N.60.014184
ORF1ab/nsp3323H323QcaCcaA22P.10.000032
ORF1ab/nsp3323H323YCacTac22P.1.160.000748
ORF1ab/nsp3323H323delCAC---22P.1.70.000639
ORF1ab/nsp3323H323HcaCcaT22Q.80.00033
ORF1ab/nsp3323H323HcaCcaT110.055556
ORF1ab/nsp3323H323RcAccGc11A0.000387
ORF1ab/nsp3323H323QcaCcaA11A0.000387
ORF1ab/nsp3323H323YCacTac11A.2.50.000499
ORF1ab/nsp3323H323YCacTac11A.2.5.20.001572
ORF1ab/nsp3323H323YCacTac11A.210.00277
ORF1ab/nsp3323H323del2CAc--c11All0
ORF1ab/nsp3323H323DCacGac11All0
ORF1ab/nsp3323H323ECaCGaA11All0
ORF1ab/nsp3323H323YCacTac11AY.10.000396
ORF1ab/nsp3323H323NCacAac11AY.10.000396
ORF1ab/nsp3323H323HcaCcaT11AY.10.000396
ORF1ab/nsp3323H323HcaCcaT11AY.100.00053
ORF1ab/nsp3323H323NCacAac11AY.1000.000046
ORF1ab/nsp3323H323QcaCcaG11AY.1000.000046
ORF1ab/nsp3323H323QcaCcaA11AY.1030.000006
ORF1ab/nsp3323H323RcAccGc11AY.1050.000643
ORF1ab/nsp3323H323HcaCcaT11AY.1080.001103
ORF1ab/nsp3323H323YCacTac11AY.1100.000113
ORF1ab/nsp3323H323LcAccTc11AY.1130.000142
ORF1ab/nsp3323H323HcaCcaT11AY.1170.000085
ORF1ab/nsp3323H323NCacAac11AY.1180.000063
ORF1ab/nsp3323H323delCAC---11AY.1190.000035
ORF1ab/nsp3323H323delCAC---11AY.1200.000037
ORF1ab/nsp3323H323HcaCcaT11AY.1210.000135
ORF1ab/nsp3323H323YCacTac11AY.200.000039
ORF1ab/nsp3323H323NCacAac11AY.200.000039
ORF1ab/nsp3323H323QcaCcaA11AY.230.00007
ORF1ab/nsp3323H323delCAC---11AY.230.00007
ORF1ab/nsp3323H323NCacAac11AY.23.10.000417
ORF1ab/nsp3323H323delCAC---11AY.240.000431
ORF1ab/nsp3323H323delCAC---11AY.260.000028
ORF1ab/nsp3323H323RcAccGc11AY.30.00001
ORF1ab/nsp3323H323QcaCcaA11AY.30.00001
ORF1ab/nsp3323H323YCacTac11AY.300.000396
ORF1ab/nsp3323H323NCacAac11AY.340.000097
ORF1ab/nsp3323H323HcaCcaT11AY.34.10.00051
ORF1ab/nsp3323H323NCacAac11AY.34.10.00051
ORF1ab/nsp3323H323YCacTac11AY.34.10.00051
ORF1ab/nsp3323H323NCacAac11AY.360.000148
ORF1ab/nsp3323H323YCacTac11AY.380.000499
ORF1ab/nsp3323H323HcaCcaT11AY.380.000499
ORF1ab/nsp3323H323RcAccGc11AY.390.000025
ORF1ab/nsp3323H323delCAC---11AY.40.000002
ORF1ab/nsp3323H323YCacTac11AY.4.2.10.000149
ORF1ab/nsp3323H323RcAccGc11AY.4.2.10.000149
ORF1ab/nsp3323H323NCacAac11AY.4.40.000409
ORF1ab/nsp3323H323YCacTac11AY.4.50.000107
ORF1ab/nsp3323H323delCAC---11AY.4.50.000107
ORF1ab/nsp3323H323delCAC---11AY.440.000006
ORF1ab/nsp3323H323YCacTac11AY.450.000122
ORF1ab/nsp3323H323HcaCcaT11AY.460.000104
ORF1ab/nsp3323H323YCacTac11AY.46.20.000635
ORF1ab/nsp3323H323NCacAac11AY.46.40.000165
ORF1ab/nsp3323H323YCacTac11AY.50.000021
ORF1ab/nsp3323H323NCacAac11AY.50.000021
ORF1ab/nsp3323H323NCacAac11AY.5.30.000337
ORF1ab/nsp3323H323YCacTac11AY.540.000095
ORF1ab/nsp3323H323HcaCcaT11AY.550.000917
ORF1ab/nsp3323H323HcaCcaT11AY.570.000656
ORF1ab/nsp3323H323YCacTac11AY.60.000041
ORF1ab/nsp3323H323HcaCcaT11AY.610.000105
ORF1ab/nsp3323H323YCacTac11AY.660.00107
ORF1ab/nsp3323H323HcaCcaT11AY.70.000196
ORF1ab/nsp3323H323YCacTac11AY.7.20.000559
ORF1ab/nsp3323H323YCacTac11AY.710.000475
ORF1ab/nsp3323H323HcaCcaT11AY.710.000475
ORF1ab/nsp3323H323YCacTac11AY.720.001361
ORF1ab/nsp3323H323YCacTac11AY.740.000116
ORF1ab/nsp3323H323NCacAac11AY.750.000056
ORF1ab/nsp3323H323HcaCcaT11AY.750.000056
ORF1ab/nsp3323H323HcaCcaT11AY.75.10.00018
ORF1ab/nsp3323H323HcaCcaT11AY.760.004831
ORF1ab/nsp3323H323HcaCcaT11AY.790.001211
ORF1ab/nsp3323H323NCacAac11AY.840.000437
ORF1ab/nsp3323H323delCAC---11AY.840.000437
ORF1ab/nsp3323H323NCacAac11AY.90.000068
ORF1ab/nsp3323H323HcaCcaT11AY.9.20.000037
ORF1ab/nsp3323H323NCacAac11AY.9.20.000037
ORF1ab/nsp3323H323YCacTac11AY.910.00073
ORF1ab/nsp3323H323NCacAac11AY.920.000287
ORF1ab/nsp3323H323HcaCcaT11AY.920.000287
ORF1ab/nsp3323H323HcaCcaT11AY.960.002075
ORF1ab/nsp3323H323YCacTac11AY.980.000079
ORF1ab/nsp3323H323NCacAac11AY.980.000079
ORF1ab/nsp3323H323YCacTac11AY.98.10.000048
ORF1ab/nsp3323H323YCacTac11AY.990.001049
ORF1ab/nsp3323H323HcaCcaT11AY.99.20.000092
ORF1ab/nsp3323H323NCaCAaT11B0.000128
ORF1ab/nsp3323H323DCacGac11B.10.000009
ORF1ab/nsp3323H323ECaCGaA11B.10.000009
ORF1ab/nsp3323H323XCaCTaA11B.10.000009
ORF1ab/nsp3323H323del1cAcc-c11B.10.000009
ORF1ab/nsp3323H323NCacAac11B.1.10.000018
ORF1ab/nsp3323H323FCAcTTc11B.1.10.000018
ORF1ab/nsp3323H323HcaCcaT11B.1.1.1170.009709
ORF1ab/nsp3323H323HcaCcaT11B.1.1.1410.002012
ORF1ab/nsp3323H323HcaCcaT11B.1.1.170.016667
ORF1ab/nsp3323H323YCacTac11B.1.1.2140.000055
ORF1ab/nsp3323H323HcaCcaT11B.1.1.250.000569
ORF1ab/nsp3323H323YCacTac11B.1.1.2530.002506
ORF1ab/nsp3323H323HcaCcaT11B.1.1.2840.000107
ORF1ab/nsp3323H323delCAC---11B.1.1.3060.000438
ORF1ab/nsp3323H323HcaCcaT11B.1.1.3160.000925
ORF1ab/nsp3323H323delCAC---11B.1.1.330.000421
ORF1ab/nsp3323H323HcaCcaT11B.1.1.3330.001076
ORF1ab/nsp3323H323YCacTac11B.1.1.3360.016667
ORF1ab/nsp3323H323delCAC---11B.1.1.3480.000796
ORF1ab/nsp3323H323HcaCcaT11B.1.1.370.000193
ORF1ab/nsp3323H323NCacAac11B.1.1.3720.000689
ORF1ab/nsp3323H323NCacAac11B.1.1.5190.00004
ORF1ab/nsp3323H323LcAccTc11B.1.1.70.000001
ORF1ab/nsp3323H323delCAC---11B.1.110.30.000718
ORF1ab/nsp3323H323HcaCcaT11B.1.1420.002899
ORF1ab/nsp3323H323HcaCcaT11B.1.1570.002985
ORF1ab/nsp3323H323NCacAac11B.1.1770.000013
ORF1ab/nsp3323H323delCAC---11B.1.1770.000013
ORF1ab/nsp3323H323RcAccGc11B.1.177.160.000664
ORF1ab/nsp3323H323RcAccGc11B.1.177.450.000381
ORF1ab/nsp3323H323HcaCcaT11B.1.177.530.002392
ORF1ab/nsp3323H323RcAccGc11B.1.177.560.000668
ORF1ab/nsp3323H323HcaCcaT11B.1.177.810.000189
ORF1ab/nsp3323H323HcaCcaT11B.1.177.820.000477
ORF1ab/nsp3323H323QcaCcaA11B.1.20.000009
ORF1ab/nsp3323H323del1caCca-11B.1.20.000009
ORF1ab/nsp3323H323delCAC---11B.1.2180.005155
ORF1ab/nsp3323H323HcaCcaT11B.1.2320.000537
ORF1ab/nsp3323H323RcAccGc11B.1.2340.000132
ORF1ab/nsp3323H323HcaCcaT11B.1.2390.001221
ORF1ab/nsp3323H323NCacAac11B.1.2400.000216
ORF1ab/nsp3323H323HcaCcaT11B.1.2430.00007
ORF1ab/nsp3323H323HcaCcaT11B.1.2470.014925
ORF1ab/nsp3323H323YCacTac11B.1.2580.000067
ORF1ab/nsp3323H323RcAccGc11B.1.2650.001271
ORF1ab/nsp3323H323QcaCcaA11B.1.2980.002114
ORF1ab/nsp3323H323YCacTac11B.1.3110.000275
ORF1ab/nsp3323H323YCacTac11B.1.3510.00003
ORF1ab/nsp3323H323RcAccGc11B.1.3510.00003
ORF1ab/nsp3323H323YCacTac11B.1.351.50.0006
ORF1ab/nsp3323H323delCAC---11B.1.360.000146
ORF1ab/nsp3323H323HcaCcaT11B.1.36.170.000494
ORF1ab/nsp3323H323HcaCcaT11B.1.36.260.002857
ORF1ab/nsp3323H323HcaCcaT11B.1.36.280.005747
ORF1ab/nsp3323H323YCacTac11B.1.3610.001289
ORF1ab/nsp3323H323NCacAac11B.1.3670.000792
ORF1ab/nsp3323H323HcaCcaT11B.1.3960.000706
ORF1ab/nsp3323H323RcAccGc11B.1.4290.000024
ORF1ab/nsp3323H323YCacTac11B.1.4290.000024
ORF1ab/nsp3323H323delCAC---11B.1.4290.000024
ORF1ab/nsp3323H323HcaCcaT11B.1.438.10.000107
ORF1ab/nsp3323H323delCAC---11B.1.438.10.000107
ORF1ab/nsp3323H323HcaCcaT11B.1.4530.003236
ORF1ab/nsp3323H323HcaCcaT11B.1.4700.001404
ORF1ab/nsp3323H323YCacTac11B.1.5250.000113
ORF1ab/nsp3323H323NCacAac11B.1.5250.000113
ORF1ab/nsp3323H323YCacTac11B.1.5270.003704
ORF1ab/nsp3323H323HcaCcaT11B.1.5610.000397
ORF1ab/nsp3323H323YCacTac11B.1.5640.000426
ORF1ab/nsp3323H323HcaCcaT11B.1.564.10.001577
ORF1ab/nsp3323H323HcaCcaT11B.1.5750.000303
ORF1ab/nsp3323H323RcAccGc11B.1.5800.004065
ORF1ab/nsp3323H323RcAccGc11B.1.6100.003546
ORF1ab/nsp3323H323YCacTac11B.1.617.10.000129
ORF1ab/nsp3323H323YCacTac11B.1.6200.000946
ORF1ab/nsp3323H323QcaCcaG11B.1.6230.000536
ORF1ab/nsp3323H323HcaCcaT11B.1.6250.002353
ORF1ab/nsp3323H323delCAC---11B.1.6270.00202
ORF1ab/nsp3323H323del1Cac-ac11B.1.6340.003425
ORF1ab/nsp3323H323YCacTac11B.1.6370.000073
ORF1ab/nsp3323H323HcaCcaT11B.1.80.001972
ORF1ab/nsp3323H323HcaCcaT11B.1.9.40.006135
ORF1ab/nsp3323H323HcaCcaT11B.400.000364
ORF1ab/nsp3323H323delCAC---11B.570.015152
ORF1ab/nsp3323H323YCacTac11C.36.30.000567
ORF1ab/nsp3323H323HcaCcaT11C.370.000116
ORF1ab/nsp3323H323NCacAac11D.20.000075
ORF1ab/nsp3323H323HcaCcaT11D.20.000075
ORF1ab/nsp3323H323YCacTac11D.20.000075
ORF1ab/nsp3323H323HcaCcaT11N.10.016949
ORF1ab/nsp3323H323RcAccGc11P.10.000016
ORF1ab/nsp3323H323del2CAc--c11P.10.000016
ORF1ab/nsp3323H323delCAC---11P.1.10.000318
ORF1ab/nsp3323H323YCacTac11P.1.120.000484
ORF1ab/nsp3323H323delCAC---11P.1.130.000898
ORF1ab/nsp3323H323HcaCcaT11P.1.130.000898
ORF1ab/nsp3323H323RcAccGc11P.1.140.000048
ORF1ab/nsp3323H323HcaCcaT11P.1.140.000048
ORF1ab/nsp3323H323HcaCcaT11P.1.170.000162
ORF1ab/nsp3323H323delCAC---11P.1.20.001156
ORF1ab/nsp3323H323HcaCcaT11Q.30.000145
ORF1ab/nsp3323H323HcaCcaT11Q.40.000455
ORF1ab/nsp3323H323QcaCcaA11R.10.00009