CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF1ab/nsp3 : CodonNum = 309

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF1ab/nsp3309D309YD1127YnonsynGacTac12594125820.9990473644-3646
ORF1ab/nsp3309D309YD1127YnonsynGaCTaT12594120.0009528353644-3646
ORF1ab/nsp3309D309DD1127DsyngaCgaT2265226513644-3646
ORF1ab/nsp3309D309ND1127NnonsynGacAac35535513644-3646
ORF1ab/nsp3309D309GD1127GnonsyngAcgGc1421400.9859153644-3646
ORF1ab/nsp3309D309GD1127GnonsyngACgGG14220.01408453644-3646
ORF1ab/nsp3309D309delD1127deldelGAC---11011013644-3646
ORF1ab/nsp3309D309ED1127EnonsyngaCgaA33270.8181823644-3646
ORF1ab/nsp3309D309ED1127EnonsyngaCgaG3360.1818183644-3646
ORF1ab/nsp3309D309AD1127AnonsyngAcgCc303013644-3646
ORF1ab/nsp3309D309VD1127VnonsyngAcgTc11100.9090913644-3646
ORF1ab/nsp3309D309VD1127VnonsyngACgTA1110.09090913644-3646
ORF1ab/nsp3309D309HD1127HnonsynGacCac3313644-3646
ORF1ab/nsp3309D309del1D1127del1delgAcg-c320.6666673644-3646
ORF1ab/nsp3309D309del1D1127del1delGaC-aT310.3333333644-3646
ORF1ab/nsp3309D309PD1127PnonsynGACCCA2213644-3646
ORF1ab/nsp3309D309LD1127LnonsynGACTTA210.53644-3646
ORF1ab/nsp3309D309LD1127LnonsynGAcCTc210.53644-3646
ORF1ab/nsp3309D309ID1127InonsynGACATT210.53644-3646
ORF1ab/nsp3309D309ID1127InonsynGAcATc210.53644-3646
ORF1ab/nsp3309D309TD1127TnonsynGACACA1113644-3646
ORF1ab/nsp3309D309XD1127XnonsynGaCTaA1113644-3646
ORF1ab/nsp3309D309FD1127FnonsynGAcTTc1113644-3646

Details of the mutation no within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF1ab/nsp3309D309YGacTac1258212594All0.002406
ORF1ab/nsp3309D309YGaCTaT1212594All0.000002
ORF1ab/nsp3309D309YGacTac1171511727AY.3.10.998806
ORF1ab/nsp3309D309YGaCTaT1211727AY.3.10.001023
ORF1ab/nsp3309D309DgaCgaT22652265All0.000433
ORF1ab/nsp3309D309DgaCgaT525525B.1.1770.006913
ORF1ab/nsp3309D309NGacAac355355All0.000068
ORF1ab/nsp3309D309DgaCgaT344344B.1.1.70.000308
ORF1ab/nsp3309D309DgaCgaT287287AY.40.000447
ORF1ab/nsp3309D309NGacAac211211B.1.1.70.000189
ORF1ab/nsp3309D309DgaCgaT162162B.1.20.001426
ORF1ab/nsp3309D309GgAcgGc140142All0.000027
ORF1ab/nsp3309D309GgACgGG2142All0
ORF1ab/nsp3309D309DgaCgaT134134B.1.177.280.992593
ORF1ab/nsp3309D309YGacTac116116AY.250.000698
ORF1ab/nsp3309D309YGacTac115115AY.920.033036
ORF1ab/nsp3309D309delGAC---110110All0.000021
ORF1ab/nsp3309D309DgaCgaT103103AY.120.032554
ORF1ab/nsp3309D309YGacTac9898B.1.617.20.000369
ORF1ab/nsp3309D309DgaCgaT7676AY.1030.000472
ORF1ab/nsp3309D309YGacTac6161AY.840.026684
ORF1ab/nsp3309D309DgaCgaT5858AY.740.006708
ORF1ab/nsp3309D309YGacTac5252AY.1170.004395
ORF1ab/nsp3309D309YGacTac5151AY.40.000079
ORF1ab/nsp3309D309DgaCgaT5050B.1.617.20.000188
ORF1ab/nsp3309D309GgAcgGc4546B.1.1.70.00004
ORF1ab/nsp3309D309GgACgGG146B.1.1.70.000001
ORF1ab/nsp3309D309YGacTac4444AY.30.000438
ORF1ab/nsp3309D309EgaCgaA2733All0.000005
ORF1ab/nsp3309D309EgaCgaG633All0.000001
ORF1ab/nsp3309D309AgAcgCc3030All0.000006
ORF1ab/nsp3309D309DgaCgaT3030AY.440.000183
ORF1ab/nsp3309D309DgaCgaT2727AY.430.00012
ORF1ab/nsp3309D309DgaCgaT2626B.10.000238
ORF1ab/nsp3309D309DgaCgaT2525AY.250.00015
ORF1ab/nsp3309D309YGacTac2525AY.4.50.002687
ORF1ab/nsp3309D309DgaCgaT2525AY.60.001028
ORF1ab/nsp3309D309GgAcgGc2222B.1.617.20.000083
ORF1ab/nsp3309D309DgaCgaT2121A.2.50.010479
ORF1ab/nsp3309D309delGAC---2121P.1.150.004879
ORF1ab/nsp3309D309DgaCgaT1919AY.1000.000874
ORF1ab/nsp3309D309GgAcgGc1919AY.40.00003
ORF1ab/nsp3309D309YGacTac1919AY.50.000392
ORF1ab/nsp3309D309DgaCgaT1919B.1.4290.000447
ORF1ab/nsp3309D309YGacTac1818AY.1050.011576
ORF1ab/nsp3309D309YGacTac1616AY.1030.000099
ORF1ab/nsp3309D309NGacAac1616AY.40.000025
ORF1ab/nsp3309D309delGAC---1616P.10.000252
ORF1ab/nsp3309D309DgaCgaT1515AY.30.000149
ORF1ab/nsp3309D309DgaCgaT1515AY.420.000603
ORF1ab/nsp3309D309NGacAac1515AY.440.000091
ORF1ab/nsp3309D309DgaCgaT1515B.1.1.5190.000596
ORF1ab/nsp3309D309YGacTac1414AY.1190.000494
ORF1ab/nsp3309D309DgaCgaT1414B.1.177.600.003058
ORF1ab/nsp3309D309NGacAac1414B.1.2580.000932
ORF1ab/nsp3309D309DgaCgaT1313AY.290.000205
ORF1ab/nsp3309D309DgaCgaT1313B.1.5990.047445
ORF1ab/nsp3309D309GgAcgGc1212AY.430.000053
ORF1ab/nsp3309D309YGacTac1212AY.440.000073
ORF1ab/nsp3309D309VgAcgTc1011All0.000002
ORF1ab/nsp3309D309VgACgTA111All0
ORF1ab/nsp3309D309YGacTac1111AY.390.000272
ORF1ab/nsp3309D309DgaCgaT1111AY.460.001145
ORF1ab/nsp3309D309DgaCgaT1111B.1.10.0002
ORF1ab/nsp3309D309EgaCgaA911B.1.1.70.000008
ORF1ab/nsp3309D309EgaCgaG211B.1.1.70.000002
ORF1ab/nsp3309D309YGacTac1010AY.430.000044
ORF1ab/nsp3309D309YGacTac1010AY.550.009174
ORF1ab/nsp3309D309YGacTac1010B.1.1.70.000009
ORF1ab/nsp3309D309AgAcgCc1010B.1.177.810.001893
ORF1ab/nsp3309D309delGAC---1010P.1.120.00484
ORF1ab/nsp3309D309DgaCgaT1010Q.80.001649
ORF1ab/nsp3309D309DgaCgaT99AY.1210.001218
ORF1ab/nsp3309D309YGacTac99AY.420.000362
ORF1ab/nsp3309D309delGAC---99B.1.1.70.000008
ORF1ab/nsp3309D309NGacAac99B.1.20.000079
ORF1ab/nsp3309D309DgaCgaT99B.1.438.10.000965
ORF1ab/nsp3309D309YGacTac88AY.1060.002679
ORF1ab/nsp3309D309NGacAac88AY.1200.000297
ORF1ab/nsp3309D309YGacTac88AY.230.000558
ORF1ab/nsp3309D309YGacTac88AY.46.60.000578
ORF1ab/nsp3309D309YGacTac88AY.790.009685
ORF1ab/nsp3309D309delGAC---88B.10.000073
ORF1ab/nsp3309D309DgaCgaT77AY.1020.000186
ORF1ab/nsp3309D309DgaCgaT77AY.390.000173
ORF1ab/nsp3309D309AgAcgCc77AY.40.000011
ORF1ab/nsp3309D309YGacTac77AY.5.30.002362
ORF1ab/nsp3309D309DgaCgaT77B.1.1600.000218
ORF1ab/nsp3309D309DgaCgaT77B.1.2580.000466
ORF1ab/nsp3309D309DgaCgaT77B.1.4690.025271
ORF1ab/nsp3309D309DgaCgaT77B.1.5540.030837
ORF1ab/nsp3309D309NGacAac77B.1.617.20.000026
ORF1ab/nsp3309D309DgaCgaT66AY.1200.000223
ORF1ab/nsp3309D309YGacTac66AY.290.000095
ORF1ab/nsp3309D309YGacTac66AY.460.000624
ORF1ab/nsp3309D309YGacTac66AY.90.000406
ORF1ab/nsp3309D309DgaCgaT66AY.9.20.00022
ORF1ab/nsp3309D309YGacTac66AY.990.006296
ORF1ab/nsp3309D309NGacAac66B.10.000055
ORF1ab/nsp3309D309YGacTac66B.1.5960.000523
ORF1ab/nsp3309D309DgaCgaT66C.370.000696
ORF1ab/nsp3309D309GgAcgGc66P.10.000095
ORF1ab/nsp3309D309YGacTac55AY.590.002648
ORF1ab/nsp3309D309NGacAac55AY.750.00028
ORF1ab/nsp3309D309EgaCgaA55B.1.1600.000156
ORF1ab/nsp3309D309DgaCgaT55B.1.177.470.064935
ORF1ab/nsp3309D309DgaCgaT55B.1.617.10.000645
ORF1ab/nsp3309D309DgaCgaT55P.10.000079
ORF1ab/nsp3309D309NGacAac55Q.80.000825
ORF1ab/nsp3309D309VgAcgTc340.166667
ORF1ab/nsp3309D309VgACgTA140.055556
ORF1ab/nsp3309D309YGacTac44AY.1160.001147
ORF1ab/nsp3309D309DgaCgaT44AY.1190.000141
ORF1ab/nsp3309D309YGacTac44AY.470.000124
ORF1ab/nsp3309D309YGacTac44AY.80.002424
ORF1ab/nsp3309D309YGacTac44AY.820.005427
ORF1ab/nsp3309D309YGacTac44AY.960.008299
ORF1ab/nsp3309D309YGacTac44AY.980.000316
ORF1ab/nsp3309D309YGacTac44B.10.000037
ORF1ab/nsp3309D309DgaCgaT44B.1.1.5210.02139
ORF1ab/nsp3309D309VgAcgTc44B.1.1.70.000004
ORF1ab/nsp3309D309NGacAac44B.1.2740.047619
ORF1ab/nsp3309D309GgAcgGc44B.1.5870.00759
ORF1ab/nsp3309D309delGAC---44B.1.6210.000354
ORF1ab/nsp3309D309NGacAac44P.10.000063
ORF1ab/nsp3309D309HGacCac33All0.000001
ORF1ab/nsp3309D309del1gAcg-c23All0
ORF1ab/nsp3309D309del1GaC-aT13All0
ORF1ab/nsp3309D309GgAcgGc33AY.1030.000019
ORF1ab/nsp3309D309YGacTac33AY.1100.000338
ORF1ab/nsp3309D309YGacTac33AY.1130.000427
ORF1ab/nsp3309D309YGacTac33AY.120.000948
ORF1ab/nsp3309D309DgaCgaT33AY.140.000264
ORF1ab/nsp3309D309DgaCgaT33AY.230.000209
ORF1ab/nsp3309D309DgaCgaT33AY.260.000085
ORF1ab/nsp3309D309GgAcgGc33AY.30.00003
ORF1ab/nsp3309D309GgAcgGc33AY.390.000074
ORF1ab/nsp3309D309EgaCgaA33AY.40.000005
ORF1ab/nsp3309D309delGAC---33AY.430.000013
ORF1ab/nsp3309D309NGacAac33AY.430.000013
ORF1ab/nsp3309D309YGacTac33AY.450.000365
ORF1ab/nsp3309D309YGacTac33AY.580.002722
ORF1ab/nsp3309D309YGacTac33AY.9.20.00011
ORF1ab/nsp3309D309GgAcgGc33B.10.000027
ORF1ab/nsp3309D309YGacTac33B.1.10.000054
ORF1ab/nsp3309D309NGacAac33B.1.10.000054
ORF1ab/nsp3309D309NGacAac33B.1.177.300.007538
ORF1ab/nsp3309D309DgaCgaT33B.1.177.350.002073
ORF1ab/nsp3309D309GgAcgGc33B.1.20.000026
ORF1ab/nsp3309D309GgAcgGc33B.1.2320.001612
ORF1ab/nsp3309D309YGacTac33B.1.2340.000396
ORF1ab/nsp3309D309DgaCgaT33B.1.258.170.000312
ORF1ab/nsp3309D309DgaCgaT33B.1.4270.000151
ORF1ab/nsp3309D309DgaCgaT33B.1.5600.013889
ORF1ab/nsp3309D309DgaCgaT33B.60.00273
ORF1ab/nsp3309D309delGAC---33C.370.000348
ORF1ab/nsp3309D309delGAC---33P.1.140.000143
ORF1ab/nsp3309D309delGAC---33P.1.70.000958
ORF1ab/nsp3309D309AgAcgCc33U.30.011583
ORF1ab/nsp3309D309delGAC---220.111111
ORF1ab/nsp3309D309PGACCCA220.111111
ORF1ab/nsp3309D309PGACCCA22All0
ORF1ab/nsp3309D309LGACTTA12All0
ORF1ab/nsp3309D309IGAcATc12All0
ORF1ab/nsp3309D309IGACATT12All0
ORF1ab/nsp3309D309LGAcCTc12All0
ORF1ab/nsp3309D309delGAC---22AY.1000.000092
ORF1ab/nsp3309D309YGacTac22AY.1020.000053
ORF1ab/nsp3309D309YGacTac22AY.1140.000462
ORF1ab/nsp3309D309NGacAac22AY.1170.000169
ORF1ab/nsp3309D309YGacTac22AY.1180.000125
ORF1ab/nsp3309D309YGacTac22AY.1200.000074
ORF1ab/nsp3309D309YGacTac22AY.130.000322
ORF1ab/nsp3309D309DgaCgaT22AY.200.000078
ORF1ab/nsp3309D309NGacAac22AY.230.000139
ORF1ab/nsp3309D309DgaCgaT22AY.270.000129
ORF1ab/nsp3309D309NGacAac22AY.3.10.000171
ORF1ab/nsp3309D309DgaCgaT22AY.360.000296
ORF1ab/nsp3309D309YGacTac22AY.380.000999
ORF1ab/nsp3309D309DgaCgaT22AY.4.50.000215
ORF1ab/nsp3309D309NGacAac22AY.4.50.000215
ORF1ab/nsp3309D309DgaCgaT22AY.450.000243
ORF1ab/nsp3309D309DgaCgaT22AY.470.000062
ORF1ab/nsp3309D309DgaCgaT22AY.50.000041
ORF1ab/nsp3309D309YGacTac22AY.620.000871
ORF1ab/nsp3309D309DgaCgaT22AY.640.00119
ORF1ab/nsp3309D309DgaCgaT22AY.70.000392
ORF1ab/nsp3309D309YGacTac22AY.730.001331
ORF1ab/nsp3309D309DgaCgaT22AY.890.009804
ORF1ab/nsp3309D309YGacTac22AY.900.001369
ORF1ab/nsp3309D309YGacTac22B0.000256
ORF1ab/nsp3309D309IGACATT12B.1.10.000018
ORF1ab/nsp3309D309IGAcATc12B.1.10.000018
ORF1ab/nsp3309D309YGacTac22B.1.1.2140.000111
ORF1ab/nsp3309D309AgAcgCc22B.1.1.70.000002
ORF1ab/nsp3309D309HGacCac22B.1.1.70.000002
ORF1ab/nsp3309D309DgaCgaT22B.1.1.700.000682
ORF1ab/nsp3309D309AgAcgCc22B.1.1770.000026
ORF1ab/nsp3309D309DgaCgaT22B.1.177.300.005025
ORF1ab/nsp3309D309YGacTac22B.1.20.000018
ORF1ab/nsp3309D309EgaCgaA22B.1.2430.000139
ORF1ab/nsp3309D309DgaCgaT22B.1.2430.000139
ORF1ab/nsp3309D309DgaCgaT22B.1.360.000292
ORF1ab/nsp3309D309NGacAac22B.1.360.000292
ORF1ab/nsp3309D309DgaCgaT22B.1.3750.001639
ORF1ab/nsp3309D309GgAcgGc22B.1.4290.000047
ORF1ab/nsp3309D309GgAcgGc22B.1.438.10.000215
ORF1ab/nsp3309D309DgaCgaT22B.1.5260.000047
ORF1ab/nsp3309D309DgaCgaT22B.1.5950.000522
ORF1ab/nsp3309D309DgaCgaT22B.1.6210.000177
ORF1ab/nsp3309D309NGacAac22B.1.6210.000177
ORF1ab/nsp3309D309DgaCgaT22D.20.00015
ORF1ab/nsp3309D309delGAC---22N.60.014184
ORF1ab/nsp3309D309EgaCgaA12P.10.000016
ORF1ab/nsp3309D309EgaCgaG12P.10.000016
ORF1ab/nsp3309D309YGacTac110.055556
ORF1ab/nsp3309D309EgaCgaA110.055556
ORF1ab/nsp3309D309XGaCTaA110.055556
ORF1ab/nsp3309D309FGAcTTc110.055556
ORF1ab/nsp3309D309LGACTTA110.055556
ORF1ab/nsp3309D309XGaCTaA11All0
ORF1ab/nsp3309D309TGACACA11All0
ORF1ab/nsp3309D309FGAcTTc11All0
ORF1ab/nsp3309D309YGacTac11AY.100.00053
ORF1ab/nsp3309D309YGacTac11AY.1080.001103
ORF1ab/nsp3309D309DgaCgaT11AY.1090.00074
ORF1ab/nsp3309D309NGacAac11AY.1110.000183
ORF1ab/nsp3309D309NGacAac11AY.1130.000142
ORF1ab/nsp3309D309GgAcgGc11AY.1160.000287
ORF1ab/nsp3309D309delGAC---11AY.1190.000035
ORF1ab/nsp3309D309DgaCgaT11AY.130.000161
ORF1ab/nsp3309D309NGacAac11AY.16.10.00047
ORF1ab/nsp3309D309DgaCgaT11AY.16.10.00047
ORF1ab/nsp3309D309YGacTac11AY.170.008197
ORF1ab/nsp3309D309delGAC---11AY.230.00007
ORF1ab/nsp3309D309delGAC---11AY.240.000431
ORF1ab/nsp3309D309GgAcgGc11AY.250.000006
ORF1ab/nsp3309D309NGacAac11AY.250.000006
ORF1ab/nsp3309D309delGAC---11AY.260.000028
ORF1ab/nsp3309D309YGacTac11AY.270.000065
ORF1ab/nsp3309D309DgaCgaT11AY.280.00189
ORF1ab/nsp3309D309EgaCgaA11AY.290.000016
ORF1ab/nsp3309D309DgaCgaT11AY.29.10.000221
ORF1ab/nsp3309D309HGacCac11AY.30.00001
ORF1ab/nsp3309D309NGacAac11AY.30.00001
ORF1ab/nsp3309D309LGAcCTc11AY.300.000396
ORF1ab/nsp3309D309DgaCgaT11AY.320.000532
ORF1ab/nsp3309D309DgaCgaT11AY.330.000067
ORF1ab/nsp3309D309AgAcgCc11AY.330.000067
ORF1ab/nsp3309D309YGacTac11AY.34.10.00051
ORF1ab/nsp3309D309AgAcgCc11AY.390.000025
ORF1ab/nsp3309D309NGacAac11AY.39.10.00004
ORF1ab/nsp3309D309YGacTac11AY.39.10.00004
ORF1ab/nsp3309D309delGAC---11AY.40.000002
ORF1ab/nsp3309D309DgaCgaT11AY.4.20.000022
ORF1ab/nsp3309D309delGAC---11AY.4.50.000107
ORF1ab/nsp3309D309AgAcgCc11AY.430.000004
ORF1ab/nsp3309D309EgaCgaA11AY.440.000006
ORF1ab/nsp3309D309del1GaC-aT11AY.440.000006
ORF1ab/nsp3309D309delGAC---11AY.440.000006
ORF1ab/nsp3309D309AgAcgCc11AY.440.000006
ORF1ab/nsp3309D309YGacTac11AY.46.10.001027
ORF1ab/nsp3309D309NGacAac11AY.470.000031
ORF1ab/nsp3309D309DgaCgaT11AY.5.30.000337
ORF1ab/nsp3309D309YGacTac11AY.540.000095
ORF1ab/nsp3309D309YGacTac11AY.560.001605
ORF1ab/nsp3309D309NGacAac11AY.60.000041
ORF1ab/nsp3309D309GgAcgGc11AY.60.000041
ORF1ab/nsp3309D309YGacTac11AY.610.000105
ORF1ab/nsp3309D309DgaCgaT11AY.610.000105
ORF1ab/nsp3309D309NGacAac11AY.640.000595
ORF1ab/nsp3309D309DgaCgaT11AY.650.000533
ORF1ab/nsp3309D309YGacTac11AY.7.20.000559
ORF1ab/nsp3309D309NGacAac11AY.730.000665
ORF1ab/nsp3309D309NGacAac11AY.740.000116
ORF1ab/nsp3309D309YGacTac11AY.740.000116
ORF1ab/nsp3309D309DgaCgaT11AY.75.10.00018
ORF1ab/nsp3309D309EgaCgaG11AY.840.000437
ORF1ab/nsp3309D309DgaCgaT11AY.850.000427
ORF1ab/nsp3309D309YGacTac11AY.870.000833
ORF1ab/nsp3309D309DgaCgaT11AY.9.10.000084
ORF1ab/nsp3309D309NGacAac11AY.930.000273
ORF1ab/nsp3309D309DgaCgaT11AY.940.000443
ORF1ab/nsp3309D309YGacTac11AY.950.000761
ORF1ab/nsp3309D309DgaCgaT11AY.980.000079
ORF1ab/nsp3309D309DgaCgaT11AY.98.10.000048
ORF1ab/nsp3309D309delGAC---11AY.990.001049
ORF1ab/nsp3309D309EgaCgaA11AY.99.10.001553
ORF1ab/nsp3309D309DgaCgaT11AY.99.20.000092
ORF1ab/nsp3309D309NGacAac11B0.000128
ORF1ab/nsp3309D309DgaCgaT11B0.000128
ORF1ab/nsp3309D309VgAcgTc11B0.000128
ORF1ab/nsp3309D309EgaCgaA11B.10.000009
ORF1ab/nsp3309D309GgAcgGc11B.1.10.000018
ORF1ab/nsp3309D309delGAC---11B.1.10.000018
ORF1ab/nsp3309D309del1gAcg-c11B.1.10.000018
ORF1ab/nsp3309D309DgaCgaT11B.1.1.1410.002012
ORF1ab/nsp3309D309GgAcgGc11B.1.1.2050.003717
ORF1ab/nsp3309D309DgaCgaT11B.1.1.2140.000055
ORF1ab/nsp3309D309DgaCgaT11B.1.1.2220.000204
ORF1ab/nsp3309D309DgaCgaT11B.1.1.2250.007194
ORF1ab/nsp3309D309DgaCgaT11B.1.1.2580.003257
ORF1ab/nsp3309D309DgaCgaT11B.1.1.280.000311
ORF1ab/nsp3309D309NGacAac11B.1.1.280.000311
ORF1ab/nsp3309D309NGacAac11B.1.1.3060.000438
ORF1ab/nsp3309D309DgaCgaT11B.1.1.3180.000302
ORF1ab/nsp3309D309NGacAac11B.1.1.3260.001761
ORF1ab/nsp3309D309delGAC---11B.1.1.330.000421
ORF1ab/nsp3309D309delGAC---11B.1.1.3480.000796
ORF1ab/nsp3309D309DgaCgaT11B.1.1.4340.000349
ORF1ab/nsp3309D309DgaCgaT11B.1.1.4450.037037
ORF1ab/nsp3309D309YGacTac11B.1.1.4520.111111
ORF1ab/nsp3309D309YGacTac11B.1.1.5190.00004
ORF1ab/nsp3309D309YGacTac11B.1.110.30.000718
ORF1ab/nsp3309D309DgaCgaT11B.1.1110.001175
ORF1ab/nsp3309D309DgaCgaT11B.1.1470.000756
ORF1ab/nsp3309D309NGacAac11B.1.1600.000031
ORF1ab/nsp3309D309GgAcgGc11B.1.1600.000031
ORF1ab/nsp3309D309DgaCgaT11B.1.160.300.002976
ORF1ab/nsp3309D309YGacTac11B.1.160.70.002079
ORF1ab/nsp3309D309YGacTac11B.1.1770.000013
ORF1ab/nsp3309D309NGacAac11B.1.1770.000013
ORF1ab/nsp3309D309delGAC---11B.1.1770.000013
ORF1ab/nsp3309D309DgaCgaT11B.1.177.100.000878
ORF1ab/nsp3309D309DgaCgaT11B.1.177.120.000152
ORF1ab/nsp3309D309DgaCgaT11B.1.177.150.000631
ORF1ab/nsp3309D309DgaCgaT11B.1.177.30.007634
ORF1ab/nsp3309D309NGacAac11B.1.177.530.002392
ORF1ab/nsp3309D309VgAcgTc11B.1.177.60.000977
ORF1ab/nsp3309D309DgaCgaT11B.1.177.620.001192
ORF1ab/nsp3309D309DgaCgaT11B.1.177.730.000566
ORF1ab/nsp3309D309DgaCgaT11B.1.177.840.006667
ORF1ab/nsp3309D309DgaCgaT11B.1.177.860.000183
ORF1ab/nsp3309D309TGACACA11B.1.20.000009
ORF1ab/nsp3309D309delGAC---11B.1.20.000009
ORF1ab/nsp3309D309delGAC---11B.1.2180.005155
ORF1ab/nsp3309D309DgaCgaT11B.1.2210.000071
ORF1ab/nsp3309D309DgaCgaT11B.1.2340.000132
ORF1ab/nsp3309D309delGAC---11B.1.2430.00007
ORF1ab/nsp3309D309NGacAac11B.1.258.210.007752
ORF1ab/nsp3309D309DgaCgaT11B.1.258.40.003448
ORF1ab/nsp3309D309NGacAac11B.1.30.002618
ORF1ab/nsp3309D309YGacTac11B.1.3240.001605
ORF1ab/nsp3309D309EgaCgaA11B.1.3510.00003
ORF1ab/nsp3309D309NGacAac11B.1.3510.00003
ORF1ab/nsp3309D309DgaCgaT11B.1.3510.00003
ORF1ab/nsp3309D309DgaCgaT11B.1.351.20.000303
ORF1ab/nsp3309D309delGAC---11B.1.360.000146
ORF1ab/nsp3309D309DgaCgaT11B.1.3670.000792
ORF1ab/nsp3309D309DgaCgaT11B.1.4040.001302
ORF1ab/nsp3309D309NGacAac11B.1.4270.00005
ORF1ab/nsp3309D309delGAC---11B.1.4290.000024
ORF1ab/nsp3309D309YGacTac11B.1.4290.000024
ORF1ab/nsp3309D309NGacAac11B.1.4290.000024
ORF1ab/nsp3309D309NGacAac11B.1.4390.005917
ORF1ab/nsp3309D309EgaCgaG11B.1.4450.011765
ORF1ab/nsp3309D309AgAcgCc11B.1.4620.007246
ORF1ab/nsp3309D309EgaCgaG11B.1.5250.000113
ORF1ab/nsp3309D309EgaCgaA11B.1.5260.000024
ORF1ab/nsp3309D309GgAcgGc11B.1.5260.000024
ORF1ab/nsp3309D309NGacAac11B.1.5610.000397
ORF1ab/nsp3309D309DgaCgaT11B.1.5620.018519
ORF1ab/nsp3309D309DgaCgaT11B.1.5690.014493
ORF1ab/nsp3309D309YGacTac11B.1.5950.000261
ORF1ab/nsp3309D309DgaCgaT11B.1.595.40.007299
ORF1ab/nsp3309D309delGAC---11B.1.5960.000087
ORF1ab/nsp3309D309DgaCgaT11B.1.5960.000087
ORF1ab/nsp3309D309YGacTac11B.1.5990.00365
ORF1ab/nsp3309D309delGAC---11B.1.617.20.000004
ORF1ab/nsp3309D309delGAC---11B.1.6270.00202
ORF1ab/nsp3309D309GgAcgGc11B.1.6280.000352
ORF1ab/nsp3309D309GgAcgGc11B.1.670.043478
ORF1ab/nsp3309D309NGacAac11B.30.000831
ORF1ab/nsp3309D309YGacTac11B.600.015873
ORF1ab/nsp3309D309GgAcgGc11C.360.000911
ORF1ab/nsp3309D309NGacAac11C.370.000116
ORF1ab/nsp3309D309YGacTac11D.20.000075
ORF1ab/nsp3309D309NGacAac11D.20.000075
ORF1ab/nsp3309D309DgaCgaT11L.10.001905
ORF1ab/nsp3309D309VgAcgTc11P.10.000016
ORF1ab/nsp3309D309del1gAcg-c11P.10.000016
ORF1ab/nsp3309D309delGAC---11P.1.10.000318
ORF1ab/nsp3309D309delGAC---11P.1.100.000269
ORF1ab/nsp3309D309delGAC---11P.1.130.000898
ORF1ab/nsp3309D309NGacAac11P.1.140.000048
ORF1ab/nsp3309D309DgaCgaT11P.1.140.000048
ORF1ab/nsp3309D309delGAC---11P.1.20.001156
ORF1ab/nsp3309D309DgaCgaT11P.1.70.000319
ORF1ab/nsp3309D309DgaCgaT11P.20.000187
ORF1ab/nsp3309D309GgACgGG11Q.80.000165
ORF1ab/nsp3309D309AgAcgCc11R.10.00009