CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF1ab/nsp3 : CodonNum = 300 & Codon = Atc

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF1ab/nsp3300V300IV1118InonsynGtcAtc64064013617-3619

Details of the mutation no within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF1ab/nsp3300V300IGtcAtc640640All0.000122
ORF1ab/nsp3300V300IGtcAtc8888AY.40.000137
ORF1ab/nsp3300V300IGtcAtc8585B.1.20.000748
ORF1ab/nsp3300V300IGtcAtc6969B.1.1.3770.095304
ORF1ab/nsp3300V300IGtcAtc6666B.1.617.20.000249
ORF1ab/nsp3300V300IGtcAtc6161B.1.1.70.000055
ORF1ab/nsp3300V300IGtcAtc3636AY.480.016744
ORF1ab/nsp3300V300IGtcAtc3232B.1.6210.002833
ORF1ab/nsp3300V300IGtcAtc2626B.1.1700.112069
ORF1ab/nsp3300V300IGtcAtc1919AY.440.000116
ORF1ab/nsp3300V300IGtcAtc1515AY.1030.000093
ORF1ab/nsp3300V300IGtcAtc1313AY.430.000058
ORF1ab/nsp3300V300IGtcAtc1212B.1.2430.000835
ORF1ab/nsp3300V300IGtcAtc1010B.1.177.40.002111
ORF1ab/nsp3300V300IGtcAtc1010B.1.2210.00071
ORF1ab/nsp3300V300IGtcAtc77AY.250.000042
ORF1ab/nsp3300V300IGtcAtc77B.1.4290.000165
ORF1ab/nsp3300V300IGtcAtc55AY.1160.001434
ORF1ab/nsp3300V300IGtcAtc55B.1.1770.000066
ORF1ab/nsp3300V300IGtcAtc55P.10.000079
ORF1ab/nsp3300V300IGtcAtc44AY.600.003752
ORF1ab/nsp3300V300IGtcAtc33AY.230.000209
ORF1ab/nsp3300V300IGtcAtc33AY.260.000085
ORF1ab/nsp3300V300IGtcAtc33B.10.000027
ORF1ab/nsp3300V300IGtcAtc33B.1.1.5190.000119
ORF1ab/nsp3300V300IGtcAtc33B.1.3150.018182
ORF1ab/nsp3300V300IGtcAtc22AY.1020.000053
ORF1ab/nsp3300V300IGtcAtc22AY.1200.000074
ORF1ab/nsp3300V300IGtcAtc22AY.1210.000271
ORF1ab/nsp3300V300IGtcAtc22AY.290.000032
ORF1ab/nsp3300V300IGtcAtc22AY.30.00002
ORF1ab/nsp3300V300IGtcAtc22AY.4.20.000043
ORF1ab/nsp3300V300IGtcAtc22B.1.1.280.000622
ORF1ab/nsp3300V300IGtcAtc22B.1.4690.00722
ORF1ab/nsp3300V300IGtcAtc22B.1.5770.001375
ORF1ab/nsp3300V300IGtcAtc22B.1.5950.000522
ORF1ab/nsp3300V300IGtcAtc22B.1.6200.001892
ORF1ab/nsp3300V300IGtcAtc11A.10.000282
ORF1ab/nsp3300V300IGtcAtc11AY.1060.000335
ORF1ab/nsp3300V300IGtcAtc11AY.1190.000035
ORF1ab/nsp3300V300IGtcAtc11AY.120.000316
ORF1ab/nsp3300V300IGtcAtc11AY.200.000039
ORF1ab/nsp3300V300IGtcAtc11AY.350.000233
ORF1ab/nsp3300V300IGtcAtc11AY.390.000025
ORF1ab/nsp3300V300IGtcAtc11AY.4.50.000107
ORF1ab/nsp3300V300IGtcAtc11AY.450.000122
ORF1ab/nsp3300V300IGtcAtc11AY.460.000104
ORF1ab/nsp3300V300IGtcAtc11AY.470.000031
ORF1ab/nsp3300V300IGtcAtc11AY.610.000105
ORF1ab/nsp3300V300IGtcAtc11AY.75.10.00018
ORF1ab/nsp3300V300IGtcAtc11B.1.1.10.000327
ORF1ab/nsp3300V300IGtcAtc11B.1.1.1840.058824
ORF1ab/nsp3300V300IGtcAtc11B.1.1.2690.001353
ORF1ab/nsp3300V300IGtcAtc11B.1.1.560.017857
ORF1ab/nsp3300V300IGtcAtc11B.1.1600.000031
ORF1ab/nsp3300V300IGtcAtc11B.1.258.170.000104
ORF1ab/nsp3300V300IGtcAtc11B.1.3620.001541
ORF1ab/nsp3300V300IGtcAtc11B.1.3750.00082
ORF1ab/nsp3300V300IGtcAtc11B.1.617.10.000129
ORF1ab/nsp3300V300IGtcAtc11B.1.6280.000352
ORF1ab/nsp3300V300IGtcAtc11C.140.004329
ORF1ab/nsp3300V300IGtcAtc11C.160.00106
ORF1ab/nsp3300V300IGtcAtc11D.20.000075
ORF1ab/nsp3300V300IGtcAtc11P.1.70.000319
ORF1ab/nsp3300V300IGtcAtc11Q.20.000613