CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF1ab/nsp3 : CodonNum = 274 & Codon = gTt

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF1ab/nsp3274A274VA1092VnonsyngCtgTt104010390.9990383539-3541

Details of the mutation no within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF1ab/nsp3274A274VgCtgTt10391040All0.000199
ORF1ab/nsp3274A274VgCtgTt153153B.1.1.70.000137
ORF1ab/nsp3274A274VgCtgTt147147AY.40.000229
ORF1ab/nsp3274A274VgCtgTt117117AY.430.000518
ORF1ab/nsp3274A274VgCtgTt6767AY.590.035487
ORF1ab/nsp3274A274VgCtgTt4545B.10.000412
ORF1ab/nsp3274A274VgCtgTt4444B.1.3510.001308
ORF1ab/nsp3274A274VgCtgTt4242AY.200.001632
ORF1ab/nsp3274A274VgCtgTt3333B.1.617.20.000124
ORF1ab/nsp3274A274VgCtgTt2727B.1.177.810.005112
ORF1ab/nsp3274A274VgCtgTt2626B.1.1600.000811
ORF1ab/nsp3274A274VgCtgTt2424AY.1200.000892
ORF1ab/nsp3274A274VgCtgTt2424B.1.1770.000316
ORF1ab/nsp3274A274VgCtgTt2222AY.1030.000137
ORF1ab/nsp3274A274VgCtgTt2121B.1.20.000185
ORF1ab/nsp3274A274VgCtgTt1717AY.440.000103
ORF1ab/nsp3274A274VgCtgTt1717AY.470.000529
ORF1ab/nsp3274A274VgCtgTt1414B.1.10.000254
ORF1ab/nsp3274A274VgCtgTt1313AY.30.000129
ORF1ab/nsp3274A274VgCtgTt1111B.1.1.1590.051402
ORF1ab/nsp3274A274VgCtgTt1010AY.260.000283
ORF1ab/nsp3274A274VgCtgTt1010AY.39.10.000396
ORF1ab/nsp3274A274VgCtgTt88B.1.2340.001056
ORF1ab/nsp3274A274VgCtgTt88P.1.40.007812
ORF1ab/nsp3274A274VgCtgTt66AY.75.10.001082
ORF1ab/nsp3274A274VgCtgTt66AY.790.007264
ORF1ab/nsp3274A274VgCtgTt66B0.000767
ORF1ab/nsp3274A274VgCtgTt66B.1.466.20.002347
ORF1ab/nsp3274A274VgCtgTt66B.1.5260.000141
ORF1ab/nsp3274A274VgCtgTt55AY.140.00044
ORF1ab/nsp3274A274VgCtgTt55P.10.000079
ORF1ab/nsp3274A274VgCtgTt44AY.50.000083
ORF1ab/nsp3274A274VgCtgTt44AY.740.000463
ORF1ab/nsp3274A274VgCtgTt44B.1.2060.003263
ORF1ab/nsp3274A274VgCtgTt44B.1.5250.000453
ORF1ab/nsp3274A274VgCtgTt33AY.230.000209
ORF1ab/nsp3274A274VgCtgTt33AY.290.000047
ORF1ab/nsp3274A274VgCtgTt33AY.4.50.000322
ORF1ab/nsp3274A274VgCtgTt33AY.9.10.000251
ORF1ab/nsp3274A274VgCtgTt33P.1.140.000143
ORF1ab/nsp3274A274VgCtgTt22AY.1020.000053
ORF1ab/nsp3274A274VgCtgTt22AY.1190.000071
ORF1ab/nsp3274A274VgCtgTt22AY.330.000134
ORF1ab/nsp3274A274VgCtgTt22AY.420.00008
ORF1ab/nsp3274A274VgCtgTt22AY.450.000243
ORF1ab/nsp3274A274VgCtgTt22AY.460.000208
ORF1ab/nsp3274A274VgCtgTt22AY.540.000191
ORF1ab/nsp3274A274VgCtgTt22B.1.1.2650.006309
ORF1ab/nsp3274A274VgCtgTt22B.1.1.5190.000079
ORF1ab/nsp3274A274VgCtgTt22B.1.1.700.000682
ORF1ab/nsp3274A274VgCtgTt12B.1.360.000146
ORF1ab/nsp3274A274VgCtgTt22B.1.5640.000852
ORF1ab/nsp3274A274VgCtgTt22B.1.6090.000959
ORF1ab/nsp3274A274VgCtgTt11A.2.20.001689
ORF1ab/nsp3274A274VgCtgTt11AY.1000.000046
ORF1ab/nsp3274A274VgCtgTt11AY.1060.000335
ORF1ab/nsp3274A274VgCtgTt11AY.1150.005208
ORF1ab/nsp3274A274VgCtgTt11AY.130.000161
ORF1ab/nsp3274A274VgCtgTt11AY.16.10.00047
ORF1ab/nsp3274A274VgCtgTt11AY.250.000006
ORF1ab/nsp3274A274VgCtgTt11AY.4.20.000022
ORF1ab/nsp3274A274VgCtgTt11AY.610.000105
ORF1ab/nsp3274A274VgCtgTt11AY.620.000436
ORF1ab/nsp3274A274VgCtgTt11AY.630.000387
ORF1ab/nsp3274A274VgCtgTt11AY.670.000464
ORF1ab/nsp3274A274VgCtgTt11AY.700.000209
ORF1ab/nsp3274A274VgCtgTt11AY.760.004831
ORF1ab/nsp3274A274VgCtgTt11AY.930.000273
ORF1ab/nsp3274A274VgCtgTt11AY.960.002075
ORF1ab/nsp3274A274VgCtgTt11AY.980.000079
ORF1ab/nsp3274A274VgCtgTt11AY.98.10.000048
ORF1ab/nsp3274A274VgCtgTt11AY.99.20.000092
ORF1ab/nsp3274A274VgCtgTt11B.1.1.2290.005747
ORF1ab/nsp3274A274VgCtgTt11B.1.1.260.005236
ORF1ab/nsp3274A274VgCtgTt11B.1.1.2800.003086
ORF1ab/nsp3274A274VgCtgTt11B.1.1.2840.000107
ORF1ab/nsp3274A274VgCtgTt11B.1.1.3480.000796
ORF1ab/nsp3274A274VgCtgTt11B.1.1.3680.003086
ORF1ab/nsp3274A274VgCtgTt11B.1.1.3690.000446
ORF1ab/nsp3274A274VgCtgTt11B.1.1.4320.001266
ORF1ab/nsp3274A274VgCtgTt11B.1.1.4340.000349
ORF1ab/nsp3274A274VgCtgTt11B.1.1.950.019608
ORF1ab/nsp3274A274VgCtgTt11B.1.1570.002985
ORF1ab/nsp3274A274VgCtgTt11B.1.177.860.000183
ORF1ab/nsp3274A274VgCtgTt11B.1.2400.000216
ORF1ab/nsp3274A274VgCtgTt11B.1.3240.001605
ORF1ab/nsp3274A274VgCtgTt11B.1.351.10.038462
ORF1ab/nsp3274A274VgCtgTt11B.1.3960.000706
ORF1ab/nsp3274A274VgCtgTt11B.1.4280.00102
ORF1ab/nsp3274A274VgCtgTt11B.1.4560.003268
ORF1ab/nsp3274A274VgCtgTt11B.1.5240.001406
ORF1ab/nsp3274A274VgCtgTt11B.1.5950.000261
ORF1ab/nsp3274A274VgCtgTt11B.1.617.10.000129
ORF1ab/nsp3274A274VgCtgTt11B.1.6360.006711
ORF1ab/nsp3274A274VgCtgTt11B.400.000364
ORF1ab/nsp3274A274VgCtgTt11R.10.00009