CoV-GLUEGenomeCountriesLineagesMutationsInsertionsDeletionsUpdated:

CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF1ab/nsp3 : CodonNum = 274

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF1ab/nsp3274A274VA1092VnonsyngCtgTt104010390.9990383539-3541
ORF1ab/nsp3274A274VA1092VnonsyngCTgTC104010.0009615383539-3541
ORF1ab/nsp3274A274AA1092AsyngcTgcG7023470.4943023539-3541
ORF1ab/nsp3274A274AA1092AsyngcTgcC7023300.4700853539-3541
ORF1ab/nsp3274A274AA1092AsyngcTgcA702250.03561253539-3541
ORF1ab/nsp3274A274TA1092TnonsynGctAct51351313539-3541
ORF1ab/nsp3274A274SA1092SnonsynGctTct4824780.9917013539-3541
ORF1ab/nsp3274A274SA1092SnonsynGCTAGC48220.004149383539-3541
ORF1ab/nsp3274A274SA1092SnonsynGcTTcG48210.002074693539-3541
ORF1ab/nsp3274A274SA1092SnonsynGcTTcC48210.002074693539-3541
ORF1ab/nsp3274A274delA1092deldelGCT---18018013539-3541
ORF1ab/nsp3274A274DA1092DnonsyngCtgAt41400.975613539-3541
ORF1ab/nsp3274A274DA1092DnonsyngCTgAC4110.02439023539-3541
ORF1ab/nsp3274A274EA1092EnonsyngCTgAG121213539-3541
ORF1ab/nsp3274A274GA1092GnonsyngCTgGA640.6666673539-3541
ORF1ab/nsp3274A274GA1092GnonsyngCtgGt620.3333333539-3541
ORF1ab/nsp3274A274PA1092PnonsynGctCct3313539-3541
ORF1ab/nsp3274A274del1A1092del1delgcTgc-320.6666673539-3541
ORF1ab/nsp3274A274del1A1092del1delgCtg-t310.3333333539-3541
ORF1ab/nsp3274A274HA1092HnonsynGCtCAt1113539-3541
ORF1ab/nsp3274A274IA1092InonsynGCtATt1113539-3541

Details of the mutation no within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF1ab/nsp3274A274VgCtgTt10391040All0.000199
ORF1ab/nsp3274A274VgCTgTC11040All0
ORF1ab/nsp3274A274AgcTgcG347702All0.000066
ORF1ab/nsp3274A274AgcTgcC330702All0.000063
ORF1ab/nsp3274A274AgcTgcA25702All0.000005
ORF1ab/nsp3274A274TGctAct513513All0.000098
ORF1ab/nsp3274A274SGctTct478482All0.000091
ORF1ab/nsp3274A274SGCTAGC2482All0
ORF1ab/nsp3274A274SGcTTcC1482All0
ORF1ab/nsp3274A274SGcTTcG1482All0
ORF1ab/nsp3274A274AgcTgcG333470B.1.1.70.000298
ORF1ab/nsp3274A274AgcTgcC134470B.1.1.70.00012
ORF1ab/nsp3274A274AgcTgcA3470B.1.1.70.000003
ORF1ab/nsp3274A274SGctTct428428B.1.36.360.257676
ORF1ab/nsp3274A274TGctAct324324B.1.1.70.00029
ORF1ab/nsp3274A274delGCT---180180All0.000034
ORF1ab/nsp3274A274VgCtgTt153153B.1.1.70.000137
ORF1ab/nsp3274A274VgCtgTt147147AY.40.000229
ORF1ab/nsp3274A274VgCtgTt117117AY.430.000518
ORF1ab/nsp3274A274VgCtgTt6767AY.590.035487
ORF1ab/nsp3274A274AgcTgcC4646B.1.617.20.000173
ORF1ab/nsp3274A274VgCtgTt4545B.10.000412
ORF1ab/nsp3274A274VgCtgTt4444B.1.3510.001308
ORF1ab/nsp3274A274VgCtgTt4242AY.200.001632
ORF1ab/nsp3274A274DgCtgAt4041All0.000008
ORF1ab/nsp3274A274DgCTgAC141All0
ORF1ab/nsp3274A274VgCtgTt3333B.1.617.20.000124
ORF1ab/nsp3274A274TGctAct3131B.1.20.000273
ORF1ab/nsp3274A274TGctAct3131B.1.3930.885714
ORF1ab/nsp3274A274VgCtgTt2727B.1.177.810.005112
ORF1ab/nsp3274A274delGCT---2626B.1.1.70.000023
ORF1ab/nsp3274A274VgCtgTt2626B.1.1600.000811
ORF1ab/nsp3274A274AgcTgcC1325AY.250.000078
ORF1ab/nsp3274A274AgcTgcA1225AY.250.000072
ORF1ab/nsp3274A274VgCtgTt2424AY.1200.000892
ORF1ab/nsp3274A274VgCtgTt2424B.1.1770.000316
ORF1ab/nsp3274A274delGCT---2323P.1.150.005344
ORF1ab/nsp3274A274VgCtgTt2222AY.1030.000137
ORF1ab/nsp3274A274delGCT---2222P.10.000347
ORF1ab/nsp3274A274AgcTgcC2121AY.430.000093
ORF1ab/nsp3274A274VgCtgTt2121B.1.20.000185
ORF1ab/nsp3274A274AgcTgcG1219P.10.000189
ORF1ab/nsp3274A274AgcTgcC719P.10.00011
ORF1ab/nsp3274A274AgcTgcC1818AY.200.0007
ORF1ab/nsp3274A274VgCtgTt1717AY.440.000103
ORF1ab/nsp3274A274VgCtgTt1717AY.470.000529
ORF1ab/nsp3274A274TGctAct1717B.10.000156
ORF1ab/nsp3274A274TGctAct1414AY.430.000062
ORF1ab/nsp3274A274VgCtgTt1414B.1.10.000254
ORF1ab/nsp3274A274VgCtgTt1313AY.30.000129
ORF1ab/nsp3274A274EgCTgAG1212All0.000002
ORF1ab/nsp3274A274TGctAct1212B.1.617.20.000045
ORF1ab/nsp3274A274EgCTgAG1212P.10.000189
ORF1ab/nsp3274A274delGCT---1111B.10.000101
ORF1ab/nsp3274A274VgCtgTt1111B.1.1.1590.051402
ORF1ab/nsp3274A274DgCtgAt1011P.10.000158
ORF1ab/nsp3274A274DgCTgAC111P.10.000016
ORF1ab/nsp3274A274VgCtgTt1010AY.260.000283
ORF1ab/nsp3274A274VgCtgTt1010AY.39.10.000396
ORF1ab/nsp3274A274TGctAct1010B.1.2390.01221
ORF1ab/nsp3274A274delGCT---1010P.1.120.00484
ORF1ab/nsp3274A274AgcTgcC99AY.440.000055
ORF1ab/nsp3274A274AgcTgcC88AY.1030.00005
ORF1ab/nsp3274A274DgCtgAt88B.1.1.70.000007
ORF1ab/nsp3274A274TGctAct88B.1.177.600.001747
ORF1ab/nsp3274A274VgCtgTt88B.1.2340.001056
ORF1ab/nsp3274A274TGctAct88B.1.4290.000188
ORF1ab/nsp3274A274delGCT---88B.1.6210.000708
ORF1ab/nsp3274A274VgCtgTt88P.1.40.007812
ORF1ab/nsp3274A274AgcTgcC77AY.40.000011
ORF1ab/nsp3274A274delGCT---77B.1.20.000062
ORF1ab/nsp3274A274GgCTgGA46All0.000001
ORF1ab/nsp3274A274GgCtgGt26All0
ORF1ab/nsp3274A274SGctTct66AY.40.000009
ORF1ab/nsp3274A274VgCtgTt66AY.75.10.001082
ORF1ab/nsp3274A274VgCtgTt66AY.790.007264
ORF1ab/nsp3274A274VgCtgTt66B0.000767
ORF1ab/nsp3274A274VgCtgTt66B.1.466.20.002347
ORF1ab/nsp3274A274VgCtgTt66B.1.5260.000141
ORF1ab/nsp3274A274VgCtgTt55AY.140.00044
ORF1ab/nsp3274A274AgcTgcC55AY.30.00005
ORF1ab/nsp3274A274delGCT---55B.1.10.000091
ORF1ab/nsp3274A274AgcTgcC55B.1.2430.000348
ORF1ab/nsp3274A274TGctAct55B.1.2580.000333
ORF1ab/nsp3274A274SGctTct55B.1.617.20.000019
ORF1ab/nsp3274A274delGCT---55C.370.00058
ORF1ab/nsp3274A274VgCtgTt55P.10.000079
ORF1ab/nsp3274A274GgCtgGt240.111111
ORF1ab/nsp3274A274GgCTgGA240.111111
ORF1ab/nsp3274A274TGctAct44AY.250.000024
ORF1ab/nsp3274A274DgCtgAt44AY.40.000006
ORF1ab/nsp3274A274delGCT---44AY.430.000018
ORF1ab/nsp3274A274VgCtgTt44AY.50.000083
ORF1ab/nsp3274A274VgCtgTt44AY.740.000463
ORF1ab/nsp3274A274VgCtgTt44B.1.2060.003263
ORF1ab/nsp3274A274AgcTgcA44B.1.3510.000119
ORF1ab/nsp3274A274SGctTct44B.1.4270.000202
ORF1ab/nsp3274A274AgcTgcC44B.1.4290.000094
ORF1ab/nsp3274A274VgCtgTt44B.1.5250.000453
ORF1ab/nsp3274A274TGctAct44P.10.000063
ORF1ab/nsp3274A274PGctCct33All0.000001
ORF1ab/nsp3274A274del1gcTgc-23All0
ORF1ab/nsp3274A274del1gCtg-t13All0
ORF1ab/nsp3274A274delGCT---33AY.1000.000138
ORF1ab/nsp3274A274VgCtgTt33AY.230.000209
ORF1ab/nsp3274A274AgcTgcC33AY.230.000209
ORF1ab/nsp3274A274VgCtgTt33AY.290.000047
ORF1ab/nsp3274A274AgcTgcC33AY.390.000074
ORF1ab/nsp3274A274VgCtgTt33AY.4.50.000322
ORF1ab/nsp3274A274AgcTgcC33AY.50.000062
ORF1ab/nsp3274A274VgCtgTt33AY.9.10.000251
ORF1ab/nsp3274A274AgcTgcC33AY.99.20.000276
ORF1ab/nsp3274A274SGctTct33B.10.000027
ORF1ab/nsp3274A274AgcTgcC33B.10.000027
ORF1ab/nsp3274A274DgCtgAt33B.10.000027
ORF1ab/nsp3274A274TGctAct33B.1.10.000054
ORF1ab/nsp3274A274SGctTct33B.1.1.70.000003
ORF1ab/nsp3274A274AgcTgcC33B.1.2790.001541
ORF1ab/nsp3274A274SGctTct33B.1.360.000438
ORF1ab/nsp3274A274DgCtgAt33B.1.5250.000339
ORF1ab/nsp3274A274delGCT---33B.1.617.20.000011
ORF1ab/nsp3274A274DgCtgAt33B.1.617.20.000011
ORF1ab/nsp3274A274AgcTgcC33B.1.6210.000266
ORF1ab/nsp3274A274VgCtgTt33P.1.140.000143
ORF1ab/nsp3274A274delGCT---33P.1.140.000143
ORF1ab/nsp3274A274delGCT---33P.1.70.000958
ORF1ab/nsp3274A274TGctAct220.111111
ORF1ab/nsp3274A274AgcTgcC22AY.1020.000053
ORF1ab/nsp3274A274VgCtgTt22AY.1020.000053
ORF1ab/nsp3274A274SGctTct22AY.1030.000012
ORF1ab/nsp3274A274SGctTct22AY.1140.000462
ORF1ab/nsp3274A274VgCtgTt22AY.1190.000071
ORF1ab/nsp3274A274SGctTct22AY.250.000012
ORF1ab/nsp3274A274TGctAct22AY.270.000129
ORF1ab/nsp3274A274TGctAct22AY.290.000032
ORF1ab/nsp3274A274AgcTgcA22AY.330.000134
ORF1ab/nsp3274A274VgCtgTt22AY.330.000134
ORF1ab/nsp3274A274delGCT---22AY.40.000003
ORF1ab/nsp3274A274TGctAct22AY.40.000003
ORF1ab/nsp3274A274VgCtgTt22AY.420.00008
ORF1ab/nsp3274A274delGCT---22AY.420.00008
ORF1ab/nsp3274A274VgCtgTt22AY.450.000243
ORF1ab/nsp3274A274VgCtgTt22AY.460.000208
ORF1ab/nsp3274A274VgCtgTt22AY.540.000191
ORF1ab/nsp3274A274delGCT---22AY.90.000135
ORF1ab/nsp3274A274AgcTgcA12B.1.10.000018
ORF1ab/nsp3274A274AgcTgcC12B.1.10.000018
ORF1ab/nsp3274A274TGctAct22B.1.1.1410.004024
ORF1ab/nsp3274A274SGctTct22B.1.1.250.001137
ORF1ab/nsp3274A274VgCtgTt22B.1.1.2650.006309
ORF1ab/nsp3274A274VgCtgTt22B.1.1.5190.000079
ORF1ab/nsp3274A274GgCTgGA22B.1.1.70.000002
ORF1ab/nsp3274A274del1gCtg-t12B.1.1.70.000001
ORF1ab/nsp3274A274del1gcTgc-12B.1.1.70.000001
ORF1ab/nsp3274A274VgCtgTt22B.1.1.700.000682
ORF1ab/nsp3274A274TGctAct22B.1.177.120.000303
ORF1ab/nsp3274A274TGctAct22B.1.177.790.004684
ORF1ab/nsp3274A274TGctAct22B.1.177.810.000379
ORF1ab/nsp3274A274delGCT---22B.1.2430.000139
ORF1ab/nsp3274A274TGctAct22B.1.3510.000059
ORF1ab/nsp3274A274VgCtgTt12B.1.360.000146
ORF1ab/nsp3274A274VgCTgTC12B.1.360.000146
ORF1ab/nsp3274A274delGCT---22B.1.4290.000047
ORF1ab/nsp3274A274AgcTgcC22B.1.438.10.000215
ORF1ab/nsp3274A274VgCtgTt22B.1.5640.000852
ORF1ab/nsp3274A274VgCtgTt22B.1.6090.000959
ORF1ab/nsp3274A274TGctAct22B.1.6390.043478
ORF1ab/nsp3274A274SGctTct22B.400.000729
ORF1ab/nsp3274A274delGCT---22N.60.014184
ORF1ab/nsp3274A274SGCTAGC12P.10.000016
ORF1ab/nsp3274A274SGctTct12P.10.000016
ORF1ab/nsp3274A274VgCtgTt11A.2.20.001689
ORF1ab/nsp3274A274IGCtATt11All0
ORF1ab/nsp3274A274HGCtCAt11All0
ORF1ab/nsp3274A274AgcTgcC11AY.10.000396
ORF1ab/nsp3274A274TGctAct11AY.1000.000046
ORF1ab/nsp3274A274VgCtgTt11AY.1000.000046
ORF1ab/nsp3274A274TGctAct11AY.1020.000027
ORF1ab/nsp3274A274TGctAct11AY.1030.000006
ORF1ab/nsp3274A274VgCtgTt11AY.1060.000335
ORF1ab/nsp3274A274SGctTct11AY.1070.000466
ORF1ab/nsp3274A274delGCT---11AY.110.001339
ORF1ab/nsp3274A274SGctTct11AY.1130.000142
ORF1ab/nsp3274A274VgCtgTt11AY.1150.005208
ORF1ab/nsp3274A274AgcTgcC11AY.1170.000085
ORF1ab/nsp3274A274TGctAct11AY.1170.000085
ORF1ab/nsp3274A274delGCT---11AY.1180.000063
ORF1ab/nsp3274A274SGctTct11AY.1180.000063
ORF1ab/nsp3274A274TGctAct11AY.120.000316
ORF1ab/nsp3274A274delGCT---11AY.1210.000135
ORF1ab/nsp3274A274VgCtgTt11AY.130.000161
ORF1ab/nsp3274A274VgCtgTt11AY.16.10.00047
ORF1ab/nsp3274A274AgcTgcC11AY.16.10.00047
ORF1ab/nsp3274A274DgCtgAt11AY.200.000039
ORF1ab/nsp3274A274SGctTct11AY.200.000039
ORF1ab/nsp3274A274delGCT---11AY.230.00007
ORF1ab/nsp3274A274delGCT---11AY.240.000431
ORF1ab/nsp3274A274delGCT---11AY.250.000006
ORF1ab/nsp3274A274VgCtgTt11AY.250.000006
ORF1ab/nsp3274A274AgcTgcC11AY.260.000028
ORF1ab/nsp3274A274delGCT---11AY.260.000028
ORF1ab/nsp3274A274SGctTct11AY.29.10.000221
ORF1ab/nsp3274A274TGctAct11AY.30.00001
ORF1ab/nsp3274A274DgCtgAt11AY.340.000097
ORF1ab/nsp3274A274DgCtgAt11AY.380.000499
ORF1ab/nsp3274A274VgCtgTt11AY.4.20.000022
ORF1ab/nsp3274A274AgcTgcC11AY.4.20.000022
ORF1ab/nsp3274A274PGctCct11AY.4.20.000022
ORF1ab/nsp3274A274AgcTgcC11AY.4.40.000409
ORF1ab/nsp3274A274AgcTgcC11AY.4.50.000107
ORF1ab/nsp3274A274AgcTgcC11AY.400.000964
ORF1ab/nsp3274A274DgCtgAt11AY.440.000006
ORF1ab/nsp3274A274delGCT---11AY.450.000122
ORF1ab/nsp3274A274AgcTgcC11AY.460.000104
ORF1ab/nsp3274A274TGctAct11AY.460.000104
ORF1ab/nsp3274A274AgcTgcC11AY.46.60.000072
ORF1ab/nsp3274A274AgcTgcC11AY.470.000031
ORF1ab/nsp3274A274TGctAct11AY.570.000656
ORF1ab/nsp3274A274AgcTgcC11AY.580.000907
ORF1ab/nsp3274A274delGCT---11AY.590.00053
ORF1ab/nsp3274A274SGctTct11AY.60.000041
ORF1ab/nsp3274A274VgCtgTt11AY.610.000105
ORF1ab/nsp3274A274TGctAct11AY.610.000105
ORF1ab/nsp3274A274TGctAct11AY.620.000436
ORF1ab/nsp3274A274VgCtgTt11AY.620.000436
ORF1ab/nsp3274A274VgCtgTt11AY.630.000387
ORF1ab/nsp3274A274VgCtgTt11AY.670.000464
ORF1ab/nsp3274A274delGCT---11AY.680.000274
ORF1ab/nsp3274A274AgcTgcC11AY.690.000187
ORF1ab/nsp3274A274VgCtgTt11AY.700.000209
ORF1ab/nsp3274A274VgCtgTt11AY.760.004831
ORF1ab/nsp3274A274delGCT---11AY.840.000437
ORF1ab/nsp3274A274TGctAct11AY.90.000068
ORF1ab/nsp3274A274AgcTgcC11AY.9.10.000084
ORF1ab/nsp3274A274AgcTgcC11AY.920.000287
ORF1ab/nsp3274A274VgCtgTt11AY.930.000273
ORF1ab/nsp3274A274VgCtgTt11AY.960.002075
ORF1ab/nsp3274A274VgCtgTt11AY.980.000079
ORF1ab/nsp3274A274TGctAct11AY.980.000079
ORF1ab/nsp3274A274TGctAct11AY.98.10.000048
ORF1ab/nsp3274A274AgcTgcC11AY.98.10.000048
ORF1ab/nsp3274A274VgCtgTt11AY.98.10.000048
ORF1ab/nsp3274A274delGCT---11AY.990.001049
ORF1ab/nsp3274A274VgCtgTt11AY.99.20.000092
ORF1ab/nsp3274A274delGCT---11AZ.20.000821
ORF1ab/nsp3274A274SGctTct11B.1.10.000018
ORF1ab/nsp3274A274delGCT---11B.1.1.1740.003378
ORF1ab/nsp3274A274VgCtgTt11B.1.1.2290.005747
ORF1ab/nsp3274A274VgCtgTt11B.1.1.260.005236
ORF1ab/nsp3274A274AgcTgcA11B.1.1.280.000311
ORF1ab/nsp3274A274VgCtgTt11B.1.1.2800.003086
ORF1ab/nsp3274A274VgCtgTt11B.1.1.2840.000107
ORF1ab/nsp3274A274SGcTTcC11B.1.1.3060.000438
ORF1ab/nsp3274A274delGCT---11B.1.1.3060.000438
ORF1ab/nsp3274A274delGCT---11B.1.1.330.000421
ORF1ab/nsp3274A274delGCT---11B.1.1.3480.000796
ORF1ab/nsp3274A274VgCtgTt11B.1.1.3480.000796
ORF1ab/nsp3274A274VgCtgTt11B.1.1.3680.003086
ORF1ab/nsp3274A274VgCtgTt11B.1.1.3690.000446
ORF1ab/nsp3274A274SGctTct11B.1.1.370.000193
ORF1ab/nsp3274A274PGctCct11B.1.1.4110.014706
ORF1ab/nsp3274A274VgCtgTt11B.1.1.4320.001266
ORF1ab/nsp3274A274VgCtgTt11B.1.1.4340.000349
ORF1ab/nsp3274A274AgcTgcC11B.1.1.5190.00004
ORF1ab/nsp3274A274IGCtATt11B.1.1.70.000001
ORF1ab/nsp3274A274PGctCct11B.1.1.70.000001
ORF1ab/nsp3274A274TGctAct11B.1.1.700.000341
ORF1ab/nsp3274A274VgCtgTt11B.1.1.950.019608
ORF1ab/nsp3274A274AgcTgcC11B.1.1260.001276
ORF1ab/nsp3274A274delGCT---11B.1.1570.002985
ORF1ab/nsp3274A274VgCtgTt11B.1.1570.002985
ORF1ab/nsp3274A274SGctTct11B.1.1570.002985
ORF1ab/nsp3274A274AgcTgcC11B.1.1600.000031
ORF1ab/nsp3274A274AgcTgcC11B.1.1770.000013
ORF1ab/nsp3274A274delGCT---11B.1.1770.000013
ORF1ab/nsp3274A274DgCtgAt11B.1.177.580.001332
ORF1ab/nsp3274A274TGctAct11B.1.177.70.000165
ORF1ab/nsp3274A274SGcTTcG11B.1.177.730.000566
ORF1ab/nsp3274A274AgcTgcC11B.1.177.730.000566
ORF1ab/nsp3274A274SGctTct11B.1.177.810.000189
ORF1ab/nsp3274A274VgCtgTt11B.1.177.860.000183
ORF1ab/nsp3274A274AgcTgcA11B.1.177.90.001332
ORF1ab/nsp3274A274DgCtgAt11B.1.20.000009
ORF1ab/nsp3274A274TGctAct11B.1.2060.000816
ORF1ab/nsp3274A274del1gcTgc-11B.1.2060.000816
ORF1ab/nsp3274A274delGCT---11B.1.2180.005155
ORF1ab/nsp3274A274delGCT---11B.1.2230.002778
ORF1ab/nsp3274A274VgCtgTt11B.1.2400.000216
ORF1ab/nsp3274A274VgCtgTt11B.1.3240.001605
ORF1ab/nsp3274A274AgcTgcC11B.1.3440.008197
ORF1ab/nsp3274A274delGCT---11B.1.3510.00003
ORF1ab/nsp3274A274VgCtgTt11B.1.351.10.038462
ORF1ab/nsp3274A274AgcTgcA11B.1.351.30.000876
ORF1ab/nsp3274A274delGCT---11B.1.360.000146
ORF1ab/nsp3274A274SGctTct11B.1.36.10.00114
ORF1ab/nsp3274A274DgCtgAt11B.1.36.290.000517
ORF1ab/nsp3274A274DgCtgAt11B.1.3670.000792
ORF1ab/nsp3274A274VgCtgTt11B.1.3960.000706
ORF1ab/nsp3274A274TGctAct11B.1.4000.000429
ORF1ab/nsp3274A274TGctAct11B.1.4250.002994
ORF1ab/nsp3274A274VgCtgTt11B.1.4280.00102
ORF1ab/nsp3274A274VgCtgTt11B.1.4560.003268
ORF1ab/nsp3274A274AgcTgcG11B.1.4620.007246
ORF1ab/nsp3274A274AgcTgcC11B.1.5170.000427
ORF1ab/nsp3274A274delGCT---11B.1.5170.000427
ORF1ab/nsp3274A274VgCtgTt11B.1.5240.001406
ORF1ab/nsp3274A274delGCT---11B.1.5260.000024
ORF1ab/nsp3274A274TGctAct11B.1.5260.000024
ORF1ab/nsp3274A274SGctTct11B.1.5900.004545
ORF1ab/nsp3274A274TGctAct11B.1.5950.000261
ORF1ab/nsp3274A274VgCtgTt11B.1.5950.000261
ORF1ab/nsp3274A274delGCT---11B.1.5960.000087
ORF1ab/nsp3274A274AgcTgcG11B.1.6090.000479
ORF1ab/nsp3274A274delGCT---11B.1.617.10.000129
ORF1ab/nsp3274A274VgCtgTt11B.1.617.10.000129
ORF1ab/nsp3274A274TGctAct11B.1.617.10.000129
ORF1ab/nsp3274A274DgCtgAt11B.1.617.10.000129
ORF1ab/nsp3274A274HGCtCAt11B.1.617.20.000004
ORF1ab/nsp3274A274delGCT---11B.1.621.10.000506
ORF1ab/nsp3274A274SGctTct11B.1.621.10.000506
ORF1ab/nsp3274A274delGCT---11B.1.6270.00202
ORF1ab/nsp3274A274VgCtgTt11B.1.6360.006711
ORF1ab/nsp3274A274VgCtgTt11B.400.000364
ORF1ab/nsp3274A274AgcTgcC11B.550.00295
ORF1ab/nsp3274A274SGctTct11C.180.002591
ORF1ab/nsp3274A274SGctTct11C.370.000116
ORF1ab/nsp3274A274delGCT---11D.20.000075
ORF1ab/nsp3274A274AgcTgcC11D.20.000075
ORF1ab/nsp3274A274delGCT---11P.1.10.000318
ORF1ab/nsp3274A274AgcTgcC11P.1.100.000269
ORF1ab/nsp3274A274delGCT---11P.1.100.000269
ORF1ab/nsp3274A274delGCT---11P.1.130.000898
ORF1ab/nsp3274A274TGctAct11P.1.140.000048
ORF1ab/nsp3274A274SGCTAGC11P.1.170.000162
ORF1ab/nsp3274A274delGCT---11P.20.000187
ORF1ab/nsp3274A274AgcTgcC11P.70.004367
ORF1ab/nsp3274A274delGCT---11Q.80.000165
ORF1ab/nsp3274A274VgCtgTt11R.10.00009

CoV-GLUE is still in development. CoV-GLUE was originally developed as part of COG-UK by Josh Singer using the GLUE framework at the MRC-University of Glasgow Centre for Virus Research (CVR). In 2021 it was redeveloped by Richard Orton to scale to the millions of genome sequences available. We acknowledge support from the MRC (MC_UU_12014/12), WT (220977/Z/20/Z) and UKRI G2P (MR/W005611/1). Please contact Richard Orton with any queries: Richard.Orton@glasgow.ac.uk

CoV-GLUE uses sequence data from GISAID. GISAID data provided via this web application is subject to GISAID's Terms and Conditions.