CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF1ab/nsp3 : CodonNum = 264

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF1ab/nsp3264A264VA1082VnonsyngCcgTc1605160513509-3511
ORF1ab/nsp3264A264AA1082AsyngcCgcT134412020.8943453509-3511
ORF1ab/nsp3264A264AA1082AsyngcCgcA13441330.09895833509-3511
ORF1ab/nsp3264A264AA1082AsyngcCgcG134490.006696433509-3511
ORF1ab/nsp3264A264TA1082TnonsynGccAcc6326210.9825953509-3511
ORF1ab/nsp3264A264TA1082TnonsynGcCAcA63250.007911393509-3511
ORF1ab/nsp3264A264TA1082TnonsynGcCAcT63230.004746843509-3511
ORF1ab/nsp3264A264TA1082TnonsynGcCAcG63230.004746843509-3511
ORF1ab/nsp3264A264DA1082DnonsyngCcgAc1301270.9769233509-3511
ORF1ab/nsp3264A264DA1082DnonsyngCCgAT13030.02307693509-3511
ORF1ab/nsp3264A264delA1082deldelGCC---676713509-3511
ORF1ab/nsp3264A264SA1082SnonsynGccTcc44280.6363643509-3511
ORF1ab/nsp3264A264SA1082SnonsynGCcAGc44130.2954553509-3511
ORF1ab/nsp3264A264SA1082SnonsynGCCAGT4430.06818183509-3511
ORF1ab/nsp3264A264GA1082GnonsyngCcgGc26160.6153853509-3511
ORF1ab/nsp3264A264GA1082GnonsyngCCgGG2640.1538463509-3511
ORF1ab/nsp3264A264GA1082GnonsyngCCgGT2630.1153853509-3511
ORF1ab/nsp3264A264GA1082GnonsyngCCgGA2630.1153853509-3511
ORF1ab/nsp3264A264NA1082NnonsynGCcAAc18150.8333333509-3511
ORF1ab/nsp3264A264NA1082NnonsynGCCAAT1830.1666673509-3511
ORF1ab/nsp3264A264EA1082EnonsyngCCgAA1160.5454553509-3511
ORF1ab/nsp3264A264EA1082EnonsyngCCgAG1150.4545453509-3511
ORF1ab/nsp3264A264del1A1082del1delgcCgc-970.7777783509-3511
ORF1ab/nsp3264A264KA1082KnonsynGCCAAG950.5555563509-3511
ORF1ab/nsp3264A264KA1082KnonsynGCCAAA940.4444443509-3511
ORF1ab/nsp3264A264RA1082RnonsynGCCAGG940.4444443509-3511
ORF1ab/nsp3264A264RA1082RnonsynGCCAGA930.3333333509-3511
ORF1ab/nsp3264A264del1A1082del1delgCcg-c920.2222223509-3511
ORF1ab/nsp3264A264RA1082RnonsynGCCCGA910.1111113509-3511
ORF1ab/nsp3264A264RA1082RnonsynGCcCGc910.1111113509-3511
ORF1ab/nsp3264A264del2A1082del2delgCCg--3313509-3511
ORF1ab/nsp3264A264PA1082PnonsynGccCcc320.6666673509-3511
ORF1ab/nsp3264A264PA1082PnonsynGcCCcA310.3333333509-3511
ORF1ab/nsp3264A264CA1082CnonsynGCcTGc2213509-3511
ORF1ab/nsp3264A264HA1082HnonsynGCcCAc1113509-3511
ORF1ab/nsp3264A264QA1082QnonsynGCCCAA1113509-3511
ORF1ab/nsp3264A264YA1082YnonsynGCCTAT1113509-3511
ORF1ab/nsp3264A264XA1082XnonsynGCCTAA1113509-3511

Details of the mutation no within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF1ab/nsp3264A264VgCcgTc16051605All0.000307
ORF1ab/nsp3264A264AgcCgcT12021344All0.00023
ORF1ab/nsp3264A264AgcCgcA1331344All0.000025
ORF1ab/nsp3264A264AgcCgcG91344All0.000002
ORF1ab/nsp3264A264TGccAcc621632All0.000119
ORF1ab/nsp3264A264TGcCAcA5632All0.000001
ORF1ab/nsp3264A264TGcCAcT3632All0.000001
ORF1ab/nsp3264A264TGcCAcG3632All0.000001
ORF1ab/nsp3264A264VgCcgTc553553B.1.5610.219532
ORF1ab/nsp3264A264AgcCgcT295388B.1.1.70.000264
ORF1ab/nsp3264A264AgcCgcA93388B.1.1.70.000083
ORF1ab/nsp3264A264TGccAcc217217AY.4.20.004706
ORF1ab/nsp3264A264VgCcgTc201201B.1.1.70.00018
ORF1ab/nsp3264A264VgCcgTc191191AY.40.000297
ORF1ab/nsp3264A264TGccAcc184184B.1.177.851
ORF1ab/nsp3264A264VgCcgTc174174B.1.4290.004094
ORF1ab/nsp3264A264AgcCgcT153153B.1.6370.01118
ORF1ab/nsp3264A264DgCcgAc127130All0.000024
ORF1ab/nsp3264A264DgCCgAT3130All0.000001
ORF1ab/nsp3264A264AgcCgcT8081AY.50.001652
ORF1ab/nsp3264A264AgcCgcG181AY.50.000021
ORF1ab/nsp3264A264AgcCgcT7172AY.1030.000441
ORF1ab/nsp3264A264AgcCgcA172AY.1030.000006
ORF1ab/nsp3264A264delGCC---6767All0.000013
ORF1ab/nsp3264A264TGccAcc5555B.1.1.70.000049
ORF1ab/nsp3264A264AgcCgcT5152AY.440.00031
ORF1ab/nsp3264A264AgcCgcA152AY.440.000006
ORF1ab/nsp3264A264AgcCgcT4750AY.30.000467
ORF1ab/nsp3264A264AgcCgcA350AY.30.00003
ORF1ab/nsp3264A264VgCcgTc5050B.1.3510.001486
ORF1ab/nsp3264A264AgcCgcT4848AY.1130.006835
ORF1ab/nsp3264A264TGccAcc4747B.1.3480.854545
ORF1ab/nsp3264A264SGccTcc2844All0.000005
ORF1ab/nsp3264A264SGCcAGc1344All0.000002
ORF1ab/nsp3264A264SGCCAGT344All0.000001
ORF1ab/nsp3264A264VgCcgTc4040AY.250.000241
ORF1ab/nsp3264A264VgCcgTc3939AY.260.001104
ORF1ab/nsp3264A264VgCcgTc3838B.1.617.20.000143
ORF1ab/nsp3264A264VgCcgTc3636AY.30.000358
ORF1ab/nsp3264A264AgcCgcT3233AY.40.00005
ORF1ab/nsp3264A264AgcCgcA133AY.40.000002
ORF1ab/nsp3264A264AgcCgcT3333C.370.00383
ORF1ab/nsp3264A264AgcCgcT3031B.1.617.20.000113
ORF1ab/nsp3264A264AgcCgcG131B.1.617.20.000004
ORF1ab/nsp3264A264GgCcgGc1626All0.000003
ORF1ab/nsp3264A264GgCCgGG426All0.000001
ORF1ab/nsp3264A264GgCCgGA326All0.000001
ORF1ab/nsp3264A264GgCCgGT326All0.000001
ORF1ab/nsp3264A264AgcCgcT2626P.1.150.006041
ORF1ab/nsp3264A264DgCcgAc2525B.1.1.70.000022
ORF1ab/nsp3264A264delGCC---2525B.1.1.70.000022
ORF1ab/nsp3264A264AgcCgcT1824B.10.000165
ORF1ab/nsp3264A264AgcCgcA524B.10.000046
ORF1ab/nsp3264A264AgcCgcG124B.10.000009
ORF1ab/nsp3264A264AgcCgcT1724B.1.20.00015
ORF1ab/nsp3264A264AgcCgcA724B.1.20.000062
ORF1ab/nsp3264A264AgcCgcT1923AY.430.000084
ORF1ab/nsp3264A264AgcCgcA423AY.430.000018
ORF1ab/nsp3264A264AgcCgcT2222B.1.771
ORF1ab/nsp3264A264DgCcgAc2020AY.1020.00053
ORF1ab/nsp3264A264NGCcAAc1518All0.000003
ORF1ab/nsp3264A264NGCCAAT318All0.000001
ORF1ab/nsp3264A264AgcCgcT1718AY.250.000102
ORF1ab/nsp3264A264AgcCgcA118AY.250.000006
ORF1ab/nsp3264A264DgCcgAc1818B.1.617.20.000068
ORF1ab/nsp3264A264VgCcgTc1717AY.440.000103
ORF1ab/nsp3264A264VgCcgTc1717AY.980.001343
ORF1ab/nsp3264A264VgCcgTc1717B.10.000156
ORF1ab/nsp3264A264VgCcgTc1717B.1.1.2220.003468
ORF1ab/nsp3264A264TGccAcc1215B.10.00011
ORF1ab/nsp3264A264TGcCAcG115B.10.000009
ORF1ab/nsp3264A264TGcCAcA115B.10.000009
ORF1ab/nsp3264A264TGcCAcT115B.10.000009
ORF1ab/nsp3264A264VgCcgTc1515B.1.3690.004278
ORF1ab/nsp3264A264AgcCgcT1314B.1.10.000236
ORF1ab/nsp3264A264AgcCgcG114B.1.10.000018
ORF1ab/nsp3264A264AgcCgcT1414P.1.140.000669
ORF1ab/nsp3264A264AgcCgcT1313B.1.177.70.002143
ORF1ab/nsp3264A264VgCcgTc1212AY.4.20.00026
ORF1ab/nsp3264A264TGccAcc1212AY.430.000053
ORF1ab/nsp3264A264TGccAcc1212B.1.6370.000877
ORF1ab/nsp3264A264EgCCgAA611All0.000001
ORF1ab/nsp3264A264EgCCgAG511All0.000001
ORF1ab/nsp3264A264VgCcgTc1111AY.1020.000292
ORF1ab/nsp3264A264AgcCgcT1111AY.1190.000388
ORF1ab/nsp3264A264DgCcgAc1011B.10.000092
ORF1ab/nsp3264A264DgCCgAT111B.10.000009
ORF1ab/nsp3264A264VgCcgTc1010AY.390.000247
ORF1ab/nsp3264A264VgCcgTc1010AY.430.000044
ORF1ab/nsp3264A264TGccAcc910B.1.617.20.000034
ORF1ab/nsp3264A264TGcCAcA110B.1.617.20.000004
ORF1ab/nsp3264A264del1gcCgc-79All0.000001
ORF1ab/nsp3264A264KGCCAAG59All0.000001
ORF1ab/nsp3264A264RGCCAGG49All0.000001
ORF1ab/nsp3264A264KGCCAAA49All0.000001
ORF1ab/nsp3264A264RGCCAGA39All0.000001
ORF1ab/nsp3264A264del1gCcg-c29All0
ORF1ab/nsp3264A264RGCCCGA19All0
ORF1ab/nsp3264A264RGCcCGc19All0
ORF1ab/nsp3264A264NGCcAAc89B.10.000073
ORF1ab/nsp3264A264NGCCAAT19B.10.000009
ORF1ab/nsp3264A264VgCcgTc99B.1.20.000079
ORF1ab/nsp3264A264AgcCgcT99B.1.5960.000784
ORF1ab/nsp3264A264AgcCgcT69P.10.000095
ORF1ab/nsp3264A264AgcCgcG29P.10.000032
ORF1ab/nsp3264A264AgcCgcA19P.10.000016
ORF1ab/nsp3264A264GgCcgGc58B.10.000046
ORF1ab/nsp3264A264GgCCgGT18B.10.000009
ORF1ab/nsp3264A264GgCCgGG18B.10.000009
ORF1ab/nsp3264A264GgCCgGA18B.10.000009
ORF1ab/nsp3264A264TGccAcc68B.1.10.000109
ORF1ab/nsp3264A264TGcCAcT18B.1.10.000018
ORF1ab/nsp3264A264TGcCAcG18B.1.10.000018
ORF1ab/nsp3264A264VgCcgTc77AY.1030.000043
ORF1ab/nsp3264A264AgcCgcT77AY.1170.000592
ORF1ab/nsp3264A264AgcCgcT77AY.1180.000439
ORF1ab/nsp3264A264AgcCgcT77AY.120.002212
ORF1ab/nsp3264A264VgCcgTc77AY.300.00277
ORF1ab/nsp3264A264DgCcgAc77AY.40.000011
ORF1ab/nsp3264A264AgcCgcT57AY.450.000608
ORF1ab/nsp3264A264AgcCgcA27AY.450.000243
ORF1ab/nsp3264A264VgCcgTc77AY.630.002708
ORF1ab/nsp3264A264VgCcgTc77AY.770.007892
ORF1ab/nsp3264A264SGCcAGc47B.10.000037
ORF1ab/nsp3264A264SGccTcc27B.10.000018
ORF1ab/nsp3264A264SGCCAGT17B.10.000009
ORF1ab/nsp3264A264AgcCgcT66AY.1000.000276
ORF1ab/nsp3264A264TGccAcc66AY.1170.000507
ORF1ab/nsp3264A264TGccAcc66AY.40.000009
ORF1ab/nsp3264A264TGccAcc66AY.440.000037
ORF1ab/nsp3264A264delGCC---66B.10.000055
ORF1ab/nsp3264A264GgCcgGc46B.1.10.000073
ORF1ab/nsp3264A264GgCCgGG16B.1.10.000018
ORF1ab/nsp3264A264GgCCgGT16B.1.10.000018
ORF1ab/nsp3264A264AgcCgcT66B.1.1770.000079
ORF1ab/nsp3264A264TGccAcc66B.1.2210.000426
ORF1ab/nsp3264A264AgcCgcT66B.1.2430.000418
ORF1ab/nsp3264A264AgcCgcT66B.1.4290.000141
ORF1ab/nsp3264A264AgcCgcT66B.1.6280.002114
ORF1ab/nsp3264A264VgCcgTc55A.23.10.003521
ORF1ab/nsp3264A264AgcCgcT55AY.1020.000133
ORF1ab/nsp3264A264AgcCgcT55AY.140.00044
ORF1ab/nsp3264A264VgCcgTc55AY.200.000194
ORF1ab/nsp3264A264AgcCgcA35AY.4.20.000065
ORF1ab/nsp3264A264AgcCgcT25AY.4.20.000043
ORF1ab/nsp3264A264AgcCgcT55AY.75.10.000902
ORF1ab/nsp3264A264DgCcgAc45B.1.10.000073
ORF1ab/nsp3264A264SGCcAGc35B.1.10.000054
ORF1ab/nsp3264A264SGCCAGT15B.1.10.000018
ORF1ab/nsp3264A264SGccTcc15B.1.10.000018
ORF1ab/nsp3264A264DgCCgAT15B.1.10.000018
ORF1ab/nsp3264A264VgCcgTc55B.1.1.3020.010373
ORF1ab/nsp3264A264delGCC---55B.1.6210.000443
ORF1ab/nsp3264A264VgCcgTc55B.1.6210.000443
ORF1ab/nsp3264A264SGccTcc44AY.1020.000106
ORF1ab/nsp3264A264DgCcgAc44AY.1030.000025
ORF1ab/nsp3264A264AgcCgcA24AY.290.000032
ORF1ab/nsp3264A264AgcCgcT14AY.290.000016
ORF1ab/nsp3264A264AgcCgcG14AY.290.000016
ORF1ab/nsp3264A264DgCcgAc44AY.430.000018
ORF1ab/nsp3264A264VgCcgTc44AY.470.000124
ORF1ab/nsp3264A264VgCcgTc44AY.530.00115
ORF1ab/nsp3264A264AgcCgcT44AY.99.20.000369
ORF1ab/nsp3264A264RGCCCGA14B.10.000009
ORF1ab/nsp3264A264RGCCAGA14B.10.000009
ORF1ab/nsp3264A264RGCcCGc14B.10.000009
ORF1ab/nsp3264A264RGCCAGG14B.10.000009
ORF1ab/nsp3264A264NGCcAAc34B.1.10.000054
ORF1ab/nsp3264A264NGCCAAT14B.1.10.000018
ORF1ab/nsp3264A264TGccAcc24B.1.1.4090.005666
ORF1ab/nsp3264A264GgCcgGc24B.1.1.4090.005666
ORF1ab/nsp3264A264GgCCgGA14B.1.1.4090.002833
ORF1ab/nsp3264A264TGcCAcA14B.1.1.4090.002833
ORF1ab/nsp3264A264GgCCgGG14B.1.1.4090.002833
ORF1ab/nsp3264A264TGcCAcG14B.1.1.4090.002833
ORF1ab/nsp3264A264VgCcgTc44B.1.1600.000125
ORF1ab/nsp3264A264VgCcgTc44B.1.1770.000053
ORF1ab/nsp3264A264VgCcgTc44B.1.360.000584
ORF1ab/nsp3264A264AgcCgcT44B.1.4270.000202
ORF1ab/nsp3264A264AgcCgcT44B.1.6210.000354
ORF1ab/nsp3264A264TGccAcc34P.10.000047
ORF1ab/nsp3264A264TGcCAcA14P.10.000016
ORF1ab/nsp3264A264del2gCCg--33All0.000001
ORF1ab/nsp3264A264PGccCcc23All0
ORF1ab/nsp3264A264PGcCCcA13All0
ORF1ab/nsp3264A264AgcCgcT33AY.1200.000112
ORF1ab/nsp3264A264AgcCgcT33AY.160.001139
ORF1ab/nsp3264A264AgcCgcT33AY.260.000085
ORF1ab/nsp3264A264DgCcgAc33AY.390.000074
ORF1ab/nsp3264A264DgCcgAc33AY.440.000018
ORF1ab/nsp3264A264VgCcgTc33AY.560.004815
ORF1ab/nsp3264A264VgCcgTc33AY.920.000862
ORF1ab/nsp3264A264KGCCAAG23B.10.000018
ORF1ab/nsp3264A264KGCCAAA13B.10.000009
ORF1ab/nsp3264A264VgCcgTc33B.1.10.000054
ORF1ab/nsp3264A264delGCC---33B.1.10.000054
ORF1ab/nsp3264A264VgCcgTc33B.1.1.330.001263
ORF1ab/nsp3264A264VgCcgTc33B.1.1.5190.000119
ORF1ab/nsp3264A264AgcCgcT33B.1.3510.000089
ORF1ab/nsp3264A264AgcCgcT33B.1.4090.002344
ORF1ab/nsp3264A264TGccAcc33B.1.4160.003807
ORF1ab/nsp3264A264AgcCgcT33B.1.5250.000339
ORF1ab/nsp3264A264AgcCgcT33B.1.5260.000071
ORF1ab/nsp3264A264AgcCgcT33B.1.617.10.000387
ORF1ab/nsp3264A264delGCC---33B.1.617.20.000011
ORF1ab/nsp3264A264VgCcgTc33C.370.000348
ORF1ab/nsp3264A264SGccTcc33D.20.000225
ORF1ab/nsp3264A264DgCcgAc33P.10.000047
ORF1ab/nsp3264A264EgCCgAG23P.10.000032
ORF1ab/nsp3264A264EgCCgAA13P.10.000016
ORF1ab/nsp3264A264delGCC---33P.1.150.000697
ORF1ab/nsp3264A264AgcCgcA33Q.80.000495
ORF1ab/nsp3264A264CGCcTGc22All0
ORF1ab/nsp3264A264DgCcgAc22AY.1000.000092
ORF1ab/nsp3264A264AgcCgcT22AY.1140.000462
ORF1ab/nsp3264A264DgCcgAc22AY.1180.000125
ORF1ab/nsp3264A264TGccAcc22AY.1180.000125
ORF1ab/nsp3264A264VgCcgTc22AY.1190.000071
ORF1ab/nsp3264A264VgCcgTc22AY.20.000712
ORF1ab/nsp3264A264AgcCgcT22AY.200.000078
ORF1ab/nsp3264A264TGccAcc22AY.230.000139
ORF1ab/nsp3264A264DgCcgAc22AY.30.00002
ORF1ab/nsp3264A264TGccAcc22AY.320.001065
ORF1ab/nsp3264A264TGccAcc22AY.450.000243
ORF1ab/nsp3264A264AgcCgcT22AY.46.40.000329
ORF1ab/nsp3264A264TGccAcc22AY.50.000041
ORF1ab/nsp3264A264VgCcgTc22AY.50.000041
ORF1ab/nsp3264A264AgcCgcT22AY.530.000575
ORF1ab/nsp3264A264AgcCgcT22AY.60.000082
ORF1ab/nsp3264A264VgCcgTc22AY.610.00021
ORF1ab/nsp3264A264AgcCgcT22AY.800.002257
ORF1ab/nsp3264A264delGCC---22AY.90.000135
ORF1ab/nsp3264A264VgCcgTc22AY.9.20.000073
ORF1ab/nsp3264A264TGccAcc22AY.98.10.000097
ORF1ab/nsp3264A264VgCcgTc22AY.98.10.000097
ORF1ab/nsp3264A264delGCC---22AZ.20.001642
ORF1ab/nsp3264A264PGccCcc12B.10.000009
ORF1ab/nsp3264A264EgCCgAG12B.10.000009
ORF1ab/nsp3264A264PGcCCcA12B.10.000009
ORF1ab/nsp3264A264EgCCgAA12B.10.000009
ORF1ab/nsp3264A264AgcCgcT22B.1.1.10.000653
ORF1ab/nsp3264A264SGCcAGc22B.1.1.4090.005666
ORF1ab/nsp3264A264AgcCgcA12B.1.1.4090.002833
ORF1ab/nsp3264A264AgcCgcG12B.1.1.4090.002833
ORF1ab/nsp3264A264EgCCgAG12B.1.1.4090.002833
ORF1ab/nsp3264A264RGCCAGG12B.1.1.4090.002833
ORF1ab/nsp3264A264EgCCgAA12B.1.1.4090.002833
ORF1ab/nsp3264A264KGCCAAG12B.1.1.4090.002833
ORF1ab/nsp3264A264RGCCAGA12B.1.1.4090.002833
ORF1ab/nsp3264A264KGCCAAA12B.1.1.4090.002833
ORF1ab/nsp3264A264TGccAcc12B.1.1390.000733
ORF1ab/nsp3264A264GgCCgGA12B.1.1390.000733
ORF1ab/nsp3264A264TGcCAcA12B.1.1390.000733
ORF1ab/nsp3264A264GgCcgGc12B.1.1390.000733
ORF1ab/nsp3264A264TGccAcc22B.1.1770.000026
ORF1ab/nsp3264A264VgCcgTc22B.1.177.860.000367
ORF1ab/nsp3264A264SGccTcc22B.1.20.000018
ORF1ab/nsp3264A264TGccAcc22B.1.258.170.000208
ORF1ab/nsp3264A264VgCcgTc22B.1.258.170.000208
ORF1ab/nsp3264A264AgcCgcT22B.1.360.000292
ORF1ab/nsp3264A264AgcCgcT22B.1.415.10.015152
ORF1ab/nsp3264A264DgCcgAc22B.1.5610.000794
ORF1ab/nsp3264A264GgCcgGc12B.1.6270.00202
ORF1ab/nsp3264A264SGCCAGT12B.1.6270.00202
ORF1ab/nsp3264A264GgCCgGT12B.1.6270.00202
ORF1ab/nsp3264A264SGCcAGc12B.1.6270.00202
ORF1ab/nsp3264A264TGcCAcT12B.1.6270.00202
ORF1ab/nsp3264A264TGccAcc12B.1.6270.00202
ORF1ab/nsp3264A264delGCC---22C.370.000232
ORF1ab/nsp3264A264AgcCgcT22D.20.00015
ORF1ab/nsp3264A264AgcCgcT22N.30.011628
ORF1ab/nsp3264A264delGCC---22N.60.014184
ORF1ab/nsp3264A264VgCcgTc22P.10.000032
ORF1ab/nsp3264A264delGCC---22P.10.000032
ORF1ab/nsp3264A264NGCcAAc22P.10.000032
ORF1ab/nsp3264A264GgCcgGc12P.10.000016
ORF1ab/nsp3264A264KGCCAAA12P.10.000016
ORF1ab/nsp3264A264KGCCAAG12P.10.000016
ORF1ab/nsp3264A264GgCCgGG12P.10.000016
ORF1ab/nsp3264A264del1gcCgc-22P.1.150.000465
ORF1ab/nsp3264A264AgcCgcT22R.10.00018
ORF1ab/nsp3264A264DgCcgAc22R.10.00018
ORF1ab/nsp3264A264QGCCCAA11All0
ORF1ab/nsp3264A264YGCCTAT11All0
ORF1ab/nsp3264A264XGCCTAA11All0
ORF1ab/nsp3264A264HGCcCAc11All0
ORF1ab/nsp3264A264del2gCCg--11AY.1000.000046
ORF1ab/nsp3264A264delGCC---11AY.1000.000046
ORF1ab/nsp3264A264delGCC---11AY.1030.000006
ORF1ab/nsp3264A264GgCcgGc11AY.1030.000006
ORF1ab/nsp3264A264SGccTcc11AY.1030.000006
ORF1ab/nsp3264A264AgcCgcT11AY.1040.001984
ORF1ab/nsp3264A264VgCcgTc11AY.1070.000466
ORF1ab/nsp3264A264VgCcgTc11AY.1080.001103
ORF1ab/nsp3264A264delGCC---11AY.110.001339
ORF1ab/nsp3264A264DgCcgAc11AY.1110.000183
ORF1ab/nsp3264A264TGccAcc11AY.1110.000183
ORF1ab/nsp3264A264VgCcgTc11AY.1170.000085
ORF1ab/nsp3264A264VgCcgTc11AY.1180.000063
ORF1ab/nsp3264A264TGccAcc11AY.120.000316
ORF1ab/nsp3264A264VgCcgTc11AY.1200.000037
ORF1ab/nsp3264A264AgcCgcA11AY.120.10.000321
ORF1ab/nsp3264A264AgcCgcT11AY.130.000161
ORF1ab/nsp3264A264VgCcgTc11AY.140.000088
ORF1ab/nsp3264A264delGCC---11AY.200.000039
ORF1ab/nsp3264A264VgCcgTc11AY.230.00007
ORF1ab/nsp3264A264SGccTcc11AY.230.00007
ORF1ab/nsp3264A264delGCC---11AY.240.000431
ORF1ab/nsp3264A264delGCC---11AY.250.000006
ORF1ab/nsp3264A264SGccTcc11AY.250.000006
ORF1ab/nsp3264A264DgCcgAc11AY.250.000006
ORF1ab/nsp3264A264TGccAcc11AY.250.000006
ORF1ab/nsp3264A264del2gCCg--11AY.250.000006
ORF1ab/nsp3264A264VgCcgTc11AY.270.000065
ORF1ab/nsp3264A264EgCCgAA11AY.30.00001
ORF1ab/nsp3264A264DgCcgAc11AY.320.000532
ORF1ab/nsp3264A264VgCcgTc11AY.330.000067
ORF1ab/nsp3264A264AgcCgcT11AY.330.000067
ORF1ab/nsp3264A264SGccTcc11AY.340.000097
ORF1ab/nsp3264A264AgcCgcT11AY.340.000097
ORF1ab/nsp3264A264delGCC---11AY.34.10.00051
ORF1ab/nsp3264A264DgCcgAc11AY.360.000148
ORF1ab/nsp3264A264VgCcgTc11AY.360.000148
ORF1ab/nsp3264A264AgcCgcT11AY.380.000499
ORF1ab/nsp3264A264DgCcgAc11AY.380.000499
ORF1ab/nsp3264A264TGccAcc11AY.390.000025
ORF1ab/nsp3264A264AgcCgcT11AY.390.000025
ORF1ab/nsp3264A264VgCcgTc11AY.39.10.00004
ORF1ab/nsp3264A264SGccTcc11AY.4.20.000022
ORF1ab/nsp3264A264AgcCgcT11AY.4.50.000107
ORF1ab/nsp3264A264DgCcgAc11AY.420.00004
ORF1ab/nsp3264A264VgCcgTc11AY.420.00004
ORF1ab/nsp3264A264SGccTcc11AY.430.000004
ORF1ab/nsp3264A264SGccTcc11AY.440.000006
ORF1ab/nsp3264A264delGCC---11AY.450.000122
ORF1ab/nsp3264A264SGccTcc11AY.460.000104
ORF1ab/nsp3264A264AgcCgcT11AY.460.000104
ORF1ab/nsp3264A264DgCcgAc11AY.460.000104
ORF1ab/nsp3264A264AgcCgcT11AY.470.000031
ORF1ab/nsp3264A264TGccAcc11AY.470.000031
ORF1ab/nsp3264A264AgcCgcT11AY.540.000095
ORF1ab/nsp3264A264AgcCgcT11AY.590.00053
ORF1ab/nsp3264A264VgCcgTc11AY.60.000041
ORF1ab/nsp3264A264AgcCgcG11AY.610.000105
ORF1ab/nsp3264A264VgCcgTc11AY.670.000464
ORF1ab/nsp3264A264del1gcCgc-11AY.680.000274
ORF1ab/nsp3264A264SGccTcc11AY.7.10.000113
ORF1ab/nsp3264A264VgCcgTc11AY.75.10.00018
ORF1ab/nsp3264A264TGccAcc11AY.80.000606
ORF1ab/nsp3264A264VgCcgTc11AY.820.001357
ORF1ab/nsp3264A264DgCcgAc11AY.840.000437
ORF1ab/nsp3264A264TGccAcc11AY.840.000437
ORF1ab/nsp3264A264AgcCgcA11AY.850.000427
ORF1ab/nsp3264A264AgcCgcT11AY.90.000068
ORF1ab/nsp3264A264VgCcgTc11AY.90.000068
ORF1ab/nsp3264A264DgCcgAc11AY.9.20.000037
ORF1ab/nsp3264A264AgcCgcT11AY.920.000287
ORF1ab/nsp3264A264AgcCgcT11AY.970.001701
ORF1ab/nsp3264A264AgcCgcT11AY.98.10.000048
ORF1ab/nsp3264A264SGccTcc11AY.98.10.000048
ORF1ab/nsp3264A264AgcCgcT11AY.990.001049
ORF1ab/nsp3264A264TGccAcc11AY.99.20.000092
ORF1ab/nsp3264A264AgcCgcT11AZ.60.008403
ORF1ab/nsp3264A264del1gCcg-c11B0.000128
ORF1ab/nsp3264A264del1gcCgc-11B.10.000009
ORF1ab/nsp3264A264CGCcTGc11B.10.000009
ORF1ab/nsp3264A264QGCCCAA11B.10.000009
ORF1ab/nsp3264A264HGCcCAc11B.10.000009
ORF1ab/nsp3264A264EgCCgAG11B.1.10.000018
ORF1ab/nsp3264A264CGCcTGc11B.1.10.000018
ORF1ab/nsp3264A264del1gcCgc-11B.1.10.000018
ORF1ab/nsp3264A264RGCCAGG11B.1.10.000018
ORF1ab/nsp3264A264KGCCAAG11B.1.10.000018
ORF1ab/nsp3264A264VgCcgTc11B.1.1.10.000327
ORF1ab/nsp3264A264VgCcgTc11B.1.1.1610.003534
ORF1ab/nsp3264A264AgcCgcT11B.1.1.2210.010101
ORF1ab/nsp3264A264AgcCgcT11B.1.1.2220.000204
ORF1ab/nsp3264A264AgcCgcT11B.1.1.2290.005747
ORF1ab/nsp3264A264TGccAcc11B.1.1.250.000569
ORF1ab/nsp3264A264AgcCgcT11B.1.1.2850.006536
ORF1ab/nsp3264A264AgcCgcT11B.1.1.2940.001266
ORF1ab/nsp3264A264VgCcgTc11B.1.1.3180.000302
ORF1ab/nsp3264A264delGCC---11B.1.1.330.000421
ORF1ab/nsp3264A264AgcCgcA11B.1.1.3350.012987
ORF1ab/nsp3264A264delGCC---11B.1.1.3480.000796
ORF1ab/nsp3264A264DgCcgAc11B.1.1.3810.04
ORF1ab/nsp3264A264NGCcAAc11B.1.1.4090.002833
ORF1ab/nsp3264A264DgCcgAc11B.1.1.4090.002833
ORF1ab/nsp3264A264VgCcgTc11B.1.1.4340.000349
ORF1ab/nsp3264A264VgCcgTc11B.1.1.4640.001473
ORF1ab/nsp3264A264VgCcgTc11B.1.1.510.001718
ORF1ab/nsp3264A264AgcCgcT11B.1.1.5240.020833
ORF1ab/nsp3264A264SGccTcc11B.1.1.70.000001
ORF1ab/nsp3264A264DgCcgAc11B.1.1390.000733
ORF1ab/nsp3264A264SGCcAGc11B.1.1390.000733
ORF1ab/nsp3264A264KGCCAAA11B.1.1390.000733
ORF1ab/nsp3264A264RGCCAGA11B.1.1390.000733
ORF1ab/nsp3264A264NGCcAAc11B.1.1390.000733
ORF1ab/nsp3264A264EgCCgAA11B.1.1390.000733
ORF1ab/nsp3264A264AgcCgcA11B.1.1390.000733
ORF1ab/nsp3264A264AgcCgcT11B.1.1470.000756
ORF1ab/nsp3264A264AgcCgcT11B.1.1600.000031
ORF1ab/nsp3264A264VgCcgTc11B.1.177.150.000631
ORF1ab/nsp3264A264VgCcgTc11B.1.177.180.00116
ORF1ab/nsp3264A264VgCcgTc11B.1.177.330.001645
ORF1ab/nsp3264A264AgcCgcT11B.1.177.730.000566
ORF1ab/nsp3264A264TGccAcc11B.1.177.730.000566
ORF1ab/nsp3264A264AgcCgcT11B.1.177.810.000189
ORF1ab/nsp3264A264TGccAcc11B.1.20.000009
ORF1ab/nsp3264A264SGCcAGc11B.1.2210.000071
ORF1ab/nsp3264A264GgCcgGc11B.1.2210.000071
ORF1ab/nsp3264A264VgCcgTc11B.1.2210.000071
ORF1ab/nsp3264A264SGccTcc11B.1.230.006061
ORF1ab/nsp3264A264AgcCgcT11B.1.2340.000132
ORF1ab/nsp3264A264AgcCgcT11B.1.2400.000216
ORF1ab/nsp3264A264VgCcgTc11B.1.2410.000812
ORF1ab/nsp3264A264SGccTcc11B.1.2430.00007
ORF1ab/nsp3264A264AgcCgcT11B.1.2580.000067
ORF1ab/nsp3264A264VgCcgTc11B.1.258.110.000396
ORF1ab/nsp3264A264VgCcgTc11B.1.258.30.001675
ORF1ab/nsp3264A264AgcCgcT11B.1.2980.002114
ORF1ab/nsp3264A264DgCcgAc11B.1.360.000146
ORF1ab/nsp3264A264VgCcgTc11B.1.36.170.000494
ORF1ab/nsp3264A264AgcCgcT11B.1.36.250.002208
ORF1ab/nsp3264A264VgCcgTc11B.1.36.290.000517
ORF1ab/nsp3264A264AgcCgcT11B.1.36.380.001642
ORF1ab/nsp3264A264VgCcgTc11B.1.3670.000792
ORF1ab/nsp3264A264SGccTcc11B.1.3690.000285
ORF1ab/nsp3264A264DgCCgAT11B.1.3750.00082
ORF1ab/nsp3264A264EgCCgAA11B.1.3750.00082
ORF1ab/nsp3264A264YGCCTAT11B.1.3750.00082
ORF1ab/nsp3264A264XGCCTAA11B.1.3750.00082
ORF1ab/nsp3264A264VgCcgTc11B.1.4200.010417
ORF1ab/nsp3264A264VgCcgTc11B.1.4270.00005
ORF1ab/nsp3264A264delGCC---11B.1.4290.000024
ORF1ab/nsp3264A264AgcCgcT11B.1.4560.003268
ORF1ab/nsp3264A264TGccAcc11B.1.5030.002488
ORF1ab/nsp3264A264VgCcgTc11B.1.5250.000113
ORF1ab/nsp3264A264DgCcgAc11B.1.5260.000024
ORF1ab/nsp3264A264VgCcgTc11B.1.5760.000907
ORF1ab/nsp3264A264NGCCAAT11B.1.5770.000687
ORF1ab/nsp3264A264VgCcgTc11B.1.5820.000491
ORF1ab/nsp3264A264VgCcgTc11B.1.5950.000261
ORF1ab/nsp3264A264del1gCcg-c11B.1.6090.000479
ORF1ab/nsp3264A264VgCcgTc11B.1.6100.003546
ORF1ab/nsp3264A264PGccCcc11B.1.617.20.000004
ORF1ab/nsp3264A264del1gcCgc-11B.1.6210.000089
ORF1ab/nsp3264A264AgcCgcT11B.1.621.10.000506
ORF1ab/nsp3264A264AgcCgcT11B.1.6230.000536
ORF1ab/nsp3264A264AgcCgcT11B.1.6270.00202
ORF1ab/nsp3264A264AgcCgcT11B.30.000831
ORF1ab/nsp3264A264AgcCgcT11B.400.000364
ORF1ab/nsp3264A264DgCcgAc11B.6.40.045455
ORF1ab/nsp3264A264SGccTcc11B.6.60.000889
ORF1ab/nsp3264A264AgcCgcT11B.610.005747
ORF1ab/nsp3264A264AgcCgcT11C.36.30.000567
ORF1ab/nsp3264A264del1gcCgc-11C.370.000116
ORF1ab/nsp3264A264SGccTcc11C.370.000116
ORF1ab/nsp3264A264DgCcgAc11D.20.000075
ORF1ab/nsp3264A264TGccAcc11D.20.000075
ORF1ab/nsp3264A264TGccAcc11N.50.001767
ORF1ab/nsp3264A264del2gCCg--11P.10.000016
ORF1ab/nsp3264A264SGCcAGc11P.10.000016
ORF1ab/nsp3264A264RGCCAGG11P.10.000016
ORF1ab/nsp3264A264delGCC---11P.1.10.000318
ORF1ab/nsp3264A264VgCcgTc11P.1.150.000232
ORF1ab/nsp3264A264AgcCgcA11P.1.160.000374
ORF1ab/nsp3264A264TGccAcc11P.1.170.000162
ORF1ab/nsp3264A264AgcCgcT11P.1.60.001946
ORF1ab/nsp3264A264TGccAcc11P.1.70.000319
ORF1ab/nsp3264A264VgCcgTc11P.20.000187
ORF1ab/nsp3264A264VgCcgTc11Q.40.000455
ORF1ab/nsp3264A264TGccAcc11Q.80.000165
ORF1ab/nsp3264A264VgCcgTc11Q.80.000165
ORF1ab/nsp3264A264AgcCgcT11W.30.005263