CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF1ab/nsp3 : CodonNum = 256 & Codon = gcT

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF1ab/nsp3256A256AA1074AsyngcCgcT209918160.8651743485-3487

Details of the mutation no within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF1ab/nsp3256A256AgcCgcT18162099All0.000347
ORF1ab/nsp3256A256AgcCgcT710742B.1.1.70.000636
ORF1ab/nsp3256A256AgcCgcT461461B.1.177.120.069933
ORF1ab/nsp3256A256AgcCgcT109123AY.40.00017
ORF1ab/nsp3256A256AgcCgcT6162AY.30.000607
ORF1ab/nsp3256A256AgcCgcT5959B.1.1880.983333
ORF1ab/nsp3256A256AgcCgcT249AY.470.000062
ORF1ab/nsp3256A256AgcCgcT4242AY.200.001632
ORF1ab/nsp3256A256AgcCgcT3539AY.250.000211
ORF1ab/nsp3256A256AgcCgcT2430B.10.00022
ORF1ab/nsp3256A256AgcCgcT2028B.1.617.20.000075
ORF1ab/nsp3256A256AgcCgcT2126AY.46.60.001516
ORF1ab/nsp3256A256AgcCgcT1923AY.430.000084
ORF1ab/nsp3256A256AgcCgcT1921B.1.4290.000447
ORF1ab/nsp3256A256AgcCgcT1818AY.440.00011
ORF1ab/nsp3256A256AgcCgcT1818B.1.1.5190.000715
ORF1ab/nsp3256A256AgcCgcT418B.1.6210.000354
ORF1ab/nsp3256A256AgcCgcT814B.1.10.000145
ORF1ab/nsp3256A256AgcCgcT1314B.1.20.000114
ORF1ab/nsp3256A256AgcCgcT1313AY.39.10.000515
ORF1ab/nsp3256A256AgcCgcT1213P.10.000189
ORF1ab/nsp3256A256AgcCgcT1112AY.1030.000068
ORF1ab/nsp3256A256AgcCgcT911P.20.00168
ORF1ab/nsp3256A256AgcCgcT88B.1.1770.000105
ORF1ab/nsp3256A256AgcCgcT77AY.50.000145
ORF1ab/nsp3256A256AgcCgcT77AY.740.00081
ORF1ab/nsp3256A256AgcCgcT77B.1.1600.000218
ORF1ab/nsp3256A256AgcCgcT66AY.98.10.000291
ORF1ab/nsp3256A256AgcCgcT55B.1.1.390.002548
ORF1ab/nsp3256A256AgcCgcT45B.1.3510.000119
ORF1ab/nsp3256A256AgcCgcT44AY.290.000063
ORF1ab/nsp3256A256AgcCgcT44AY.390.000099
ORF1ab/nsp3256A256AgcCgcT34B0.000383
ORF1ab/nsp3256A256AgcCgcT44B.1.466.20.001565
ORF1ab/nsp3256A256AgcCgcT44Q.10.000505
ORF1ab/nsp3256A256AgcCgcT33B.1.2580.0002
ORF1ab/nsp3256A256AgcCgcT23Q.80.00033
ORF1ab/nsp3256A256AgcCgcT12A0.000387
ORF1ab/nsp3256A256AgcCgcT22AY.1020.000053
ORF1ab/nsp3256A256AgcCgcT22AY.1170.000169
ORF1ab/nsp3256A256AgcCgcT22AY.1180.000125
ORF1ab/nsp3256A256AgcCgcT22AY.120.000632
ORF1ab/nsp3256A256AgcCgcT22AY.1200.000074
ORF1ab/nsp3256A256AgcCgcT22AY.160.000759
ORF1ab/nsp3256A256AgcCgcT12AY.230.00007
ORF1ab/nsp3256A256AgcCgcT22AY.750.000112
ORF1ab/nsp3256A256AgcCgcT22B.1.1.2220.000408
ORF1ab/nsp3256A256AgcCgcT22B.1.1.280.000622
ORF1ab/nsp3256A256AgcCgcT12B.1.5960.000087
ORF1ab/nsp3256A256AgcCgcT22B.1.619.10.001283
ORF1ab/nsp3256A256AgcCgcT11AW.10.003049
ORF1ab/nsp3256A256AgcCgcT11AY.1160.000287
ORF1ab/nsp3256A256AgcCgcT11AY.270.000065
ORF1ab/nsp3256A256AgcCgcT11AY.3.10.000085
ORF1ab/nsp3256A256AgcCgcT11AY.4.20.000022
ORF1ab/nsp3256A256AgcCgcT11AY.4.50.000107
ORF1ab/nsp3256A256AgcCgcT11AY.450.000122
ORF1ab/nsp3256A256AgcCgcT11AY.670.000464
ORF1ab/nsp3256A256AgcCgcT11AY.790.001211
ORF1ab/nsp3256A256AgcCgcT11AY.9.20.000037
ORF1ab/nsp3256A256AgcCgcT11AY.920.000287
ORF1ab/nsp3256A256AgcCgcT11AY.930.000273
ORF1ab/nsp3256A256AgcCgcT11AY.990.001049
ORF1ab/nsp3256A256AgcCgcT11B.1.1.3180.000302
ORF1ab/nsp3256A256AgcCgcT11B.1.1.330.000421
ORF1ab/nsp3256A256AgcCgcT11B.1.1.5280.004808
ORF1ab/nsp3256A256AgcCgcT11B.1.177.160.000664
ORF1ab/nsp3256A256AgcCgcT11B.1.177.350.000691
ORF1ab/nsp3256A256AgcCgcT11B.1.177.40.000211
ORF1ab/nsp3256A256AgcCgcT11B.1.177.70.000165
ORF1ab/nsp3256A256AgcCgcT11B.1.177.860.000183
ORF1ab/nsp3256A256AgcCgcT11B.1.2430.00007
ORF1ab/nsp3256A256AgcCgcT11B.1.351.50.0006
ORF1ab/nsp3256A256AgcCgcT11B.1.360.000146
ORF1ab/nsp3256A256AgcCgcT11B.1.36.290.000517
ORF1ab/nsp3256A256AgcCgcT11B.1.3690.000285
ORF1ab/nsp3256A256AgcCgcT11B.1.3710.001122
ORF1ab/nsp3256A256AgcCgcT11B.1.3890.001002
ORF1ab/nsp3256A256AgcCgcT11B.1.4080.00369
ORF1ab/nsp3256A256AgcCgcT11B.1.438.10.000107
ORF1ab/nsp3256A256AgcCgcT11B.1.4890.043478
ORF1ab/nsp3256A256AgcCgcT11B.1.5580.004566
ORF1ab/nsp3256A256AgcCgcT11B.1.5610.000397
ORF1ab/nsp3256A256AgcCgcT11B.1.5950.000261
ORF1ab/nsp3256A256AgcCgcT11C.1.20.004255
ORF1ab/nsp3256A256AgcCgcT11C.350.000774
ORF1ab/nsp3256A256AgcCgcT11N.90.005952