CoV-GLUEGenomeCountriesLineagesMutationsInsertionsDeletionsUpdated:

CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF1ab/nsp3 : CodonNum = 255

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF1ab/nsp3255G255VG1073VnonsyngGagTa228322820.9995623482-3484
ORF1ab/nsp3255G255VG1073VnonsyngGAgTG228310.000438023482-3484
ORF1ab/nsp3255G255RG1073RnonsynGgaAga171816960.9871943482-3484
ORF1ab/nsp3255G255RG1073RnonsynGgaCga1718180.01047733482-3484
ORF1ab/nsp3255G255RG1073RnonsynGgAAgG171840.002328293482-3484
ORF1ab/nsp3255G255EG1073EnonsyngGagAa7617500.9855453482-3484
ORF1ab/nsp3255G255EG1073EnonsyngGAgAG761110.01445473482-3484
ORF1ab/nsp3255G255GG1073GsynggAggG6575860.8919333482-3484
ORF1ab/nsp3255G255GG1073GsynggAggC657420.06392693482-3484
ORF1ab/nsp3255G255GG1073GsynggAggT657290.044143482-3484
ORF1ab/nsp3255G255delG1073deldelGGA---303013482-3484
ORF1ab/nsp3255G255AG1073AnonsyngGagCa141413482-3484
ORF1ab/nsp3255G255del1G1073del1delGga-ga840.53482-3484
ORF1ab/nsp3255G255del1G1073del1delggAgg-840.53482-3484
ORF1ab/nsp3255G255IG1073InonsynGGaATa2213482-3484
ORF1ab/nsp3255G255XG1073XnonsynGgaTga2213482-3484
ORF1ab/nsp3255G255KG1073KnonsynGGAAAG210.53482-3484
ORF1ab/nsp3255G255KG1073KnonsynGGaAAa210.53482-3484
ORF1ab/nsp3255G255del2G1073del2delgGAg--1113482-3484
ORF1ab/nsp3255G255SG1073SnonsynGgAAgT1113482-3484
ORF1ab/nsp3255G255MG1073MnonsynGGAATG1113482-3484

Details of the mutation no within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF1ab/nsp3255G255VgGagTa22822283All0.000436
ORF1ab/nsp3255G255VgGAgTG12283All0
ORF1ab/nsp3255G255RGgaAga16961718All0.000324
ORF1ab/nsp3255G255RGgaCga181718All0.000003
ORF1ab/nsp3255G255RGgAAgG41718All0.000001
ORF1ab/nsp3255G255VgGagTa845845B.1.1.70.000756
ORF1ab/nsp3255G255EgGagAa750761All0.000143
ORF1ab/nsp3255G255EgGAgAG11761All0.000002
ORF1ab/nsp3255G255GggAggG586657All0.000112
ORF1ab/nsp3255G255GggAggC42657All0.000008
ORF1ab/nsp3255G255GggAggT29657All0.000006
ORF1ab/nsp3255G255RGgaAga462471B.1.1.70.000414
ORF1ab/nsp3255G255RGgaCga9471B.1.1.70.000008
ORF1ab/nsp3255G255RGgaAga345345B.1.1.500.234216
ORF1ab/nsp3255G255VgGagTa255255B.1.1.3690.113788
ORF1ab/nsp3255G255EgGagAa199199AY.9.20.007309
ORF1ab/nsp3255G255GggAggG181181B.1.2340.023882
ORF1ab/nsp3255G255GggAggG136144B.1.1.70.000122
ORF1ab/nsp3255G255GggAggC5144B.1.1.70.000004
ORF1ab/nsp3255G255GggAggT3144B.1.1.70.000003
ORF1ab/nsp3255G255RGgaAga123124AY.40.000191
ORF1ab/nsp3255G255RGgaCga1124AY.40.000002
ORF1ab/nsp3255G255RGgaAga115115B.1.20.001013
ORF1ab/nsp3255G255VgGagTa109109B.1.6230.058476
ORF1ab/nsp3255G255VgGagTa9797B.1.4970.030532
ORF1ab/nsp3255G255EgGagAa9696B.1.1.70.000086
ORF1ab/nsp3255G255RGgaAga9393B.1.617.20.00035
ORF1ab/nsp3255G255VgGagTa9191AY.98.10.004407
ORF1ab/nsp3255G255EgGagAa8383B.1.4200.864583
ORF1ab/nsp3255G255VgGagTa8282AY.40.000128
ORF1ab/nsp3255G255VgGagTa7070AY.1030.000435
ORF1ab/nsp3255G255VgGagTa6464B.1.5250.007242
ORF1ab/nsp3255G255RGgaAga6161B.1.5650.049433
ORF1ab/nsp3255G255EgGagAa5959B.1.258.170.006134
ORF1ab/nsp3255G255VgGagTa5555B.1.617.20.000207
ORF1ab/nsp3255G255VgGagTa5454AY.440.000329
ORF1ab/nsp3255G255VgGagTa5050B.1.177.860.009173
ORF1ab/nsp3255G255EgGagAa4848B.1.617.20.000181
ORF1ab/nsp3255G255RGgaAga3939AY.390.000964
ORF1ab/nsp3255G255VgGagTa3737AY.250.000223
ORF1ab/nsp3255G255EgGagAa3737AY.50.000764
ORF1ab/nsp3255G255RGgaAga3636AY.260.001019
ORF1ab/nsp3255G255VgGagTa3636B.1.20.000317
ORF1ab/nsp3255G255EgGagAa3535AY.40.000054
ORF1ab/nsp3255G255GggAggG3333AY.750.001849
ORF1ab/nsp3255G255VgGagTa3131P.10.000488
ORF1ab/nsp3255G255delGGA---3030All0.000006
ORF1ab/nsp3255G255VgGagTa2828AY.50.000578
ORF1ab/nsp3255G255RGgaAga2828B.1.177.200.042489
ORF1ab/nsp3255G255VgGagTa2727AY.430.00012
ORF1ab/nsp3255G255VgGagTa2727B.1.5260.000635
ORF1ab/nsp3255G255VgGagTa2525AY.360.003705
ORF1ab/nsp3255G255EgGagAa2525B.10.000229
ORF1ab/nsp3255G255EgGagAa2525B.1.2650.031766
ORF1ab/nsp3255G255VgGagTa2424B.1.3850.255319
ORF1ab/nsp3255G255GggAggG1324B.1.617.20.000049
ORF1ab/nsp3255G255GggAggT624B.1.617.20.000023
ORF1ab/nsp3255G255GggAggC524B.1.617.20.000019
ORF1ab/nsp3255G255RGgaAga2323AY.440.00014
ORF1ab/nsp3255G255RGgaAga2323B.10.000211
ORF1ab/nsp3255G255VgGagTa2222B.10.000202
ORF1ab/nsp3255G255GggAggG2022B.10.000183
ORF1ab/nsp3255G255GggAggC222B.10.000018
ORF1ab/nsp3255G255VgGagTa2121B.1.177.810.003976
ORF1ab/nsp3255G255GggAggG1720AY.40.000026
ORF1ab/nsp3255G255GggAggC220AY.40.000003
ORF1ab/nsp3255G255GggAggT120AY.40.000002
ORF1ab/nsp3255G255RGgaAga1719AY.1020.000451
ORF1ab/nsp3255G255RGgaCga219AY.1020.000053
ORF1ab/nsp3255G255RGgaAga1919AY.430.000084
ORF1ab/nsp3255G255RGgaAga1717AY.46.60.001228
ORF1ab/nsp3255G255RGgaAga1717B.1.1770.000224
ORF1ab/nsp3255G255RGgaAga1616AY.30.000159
ORF1ab/nsp3255G255GggAggG1015AY.250.00006
ORF1ab/nsp3255G255GggAggC515AY.250.00003
ORF1ab/nsp3255G255VgGagTa1515AY.30.000149
ORF1ab/nsp3255G255RGgaAga1515B.1.2340.001979
ORF1ab/nsp3255G255GggAggG1515B.1.5950.003914
ORF1ab/nsp3255G255AgGagCa1414All0.000003
ORF1ab/nsp3255G255VgGagTa1313AY.1020.000345
ORF1ab/nsp3255G255RGgaAga1112B.1.10.0002
ORF1ab/nsp3255G255RGgAAgG112B.1.10.000018
ORF1ab/nsp3255G255VgGagTa1212B.1.1770.000158
ORF1ab/nsp3255G255GggAggG1111AY.430.000049
ORF1ab/nsp3255G255GggAggG1011B.1.1.5190.000397
ORF1ab/nsp3255G255GggAggC111B.1.1.5190.00004
ORF1ab/nsp3255G255RGgaAga1111B.1.2580.000732
ORF1ab/nsp3255G255EgGagAa1010AY.23.10.004174
ORF1ab/nsp3255G255RGgaAga810AY.250.000048
ORF1ab/nsp3255G255RGgaCga210AY.250.000012
ORF1ab/nsp3255G255GggAggG710AY.440.000043
ORF1ab/nsp3255G255GggAggT310AY.440.000018
ORF1ab/nsp3255G255GggAggG1010AY.740.001156
ORF1ab/nsp3255G255EgGAgAG1010B.1.1.390.005097
ORF1ab/nsp3255G255VgGagTa1010B.1.1.5190.000397
ORF1ab/nsp3255G255EgGagAa1010B.1.5960.000871
ORF1ab/nsp3255G255EgGagAa99AY.250.000054
ORF1ab/nsp3255G255RGgaAga99AY.290.000142
ORF1ab/nsp3255G255GggAggG79B.1.10.000127
ORF1ab/nsp3255G255GggAggC19B.1.10.000018
ORF1ab/nsp3255G255GggAggT19B.1.10.000018
ORF1ab/nsp3255G255GggAggG99D.20.000675
ORF1ab/nsp3255G255VgGagTa99P.1.140.00043
ORF1ab/nsp3255G255del1Gga-ga48All0.000001
ORF1ab/nsp3255G255del1ggAgg-48All0.000001
ORF1ab/nsp3255G255VgGagTa88B.1.10.000145
ORF1ab/nsp3255G255EgGagAa88B.1.1770.000105
ORF1ab/nsp3255G255GggAggG88B.1.20.00007
ORF1ab/nsp3255G255RGgaAga88P.10.000126
ORF1ab/nsp3255G255RGgaAga77AY.1030.000043
ORF1ab/nsp3255G255GggAggG57AY.1030.000031
ORF1ab/nsp3255G255GggAggC27AY.1030.000012
ORF1ab/nsp3255G255VgGagTa77AY.230.000488
ORF1ab/nsp3255G255VgGagTa77AY.390.000173
ORF1ab/nsp3255G255RGgaAga77AY.750.000392
ORF1ab/nsp3255G255RGgaAga77B.1.1600.000218
ORF1ab/nsp3255G255EgGagAa77B.1.5260.000165
ORF1ab/nsp3255G255RGgaAga77B.1.5260.000165
ORF1ab/nsp3255G255RGgaAga460.222222
ORF1ab/nsp3255G255RGgAAgG260.111111
ORF1ab/nsp3255G255GggAggC66AY.23.10.002504
ORF1ab/nsp3255G255EgGagAa66AY.30.00006
ORF1ab/nsp3255G255RGgaAga66AY.4.20.00013
ORF1ab/nsp3255G255RGgaAga66AY.760.028986
ORF1ab/nsp3255G255RGgaAga66AY.980.000474
ORF1ab/nsp3255G255GggAggG36AY.98.10.000145
ORF1ab/nsp3255G255GggAggC36AY.98.10.000145
ORF1ab/nsp3255G255delGGA---66B.10.000055
ORF1ab/nsp3255G255VgGagTa66B.1.1110.007051
ORF1ab/nsp3255G255RGgaCga36B.1.4290.000071
ORF1ab/nsp3255G255RGgaAga36B.1.4290.000071
ORF1ab/nsp3255G255RGgaAga55AY.1180.000313
ORF1ab/nsp3255G255RGgaAga55AY.1190.000177
ORF1ab/nsp3255G255GggAggC35AY.290.000047
ORF1ab/nsp3255G255GggAggG25AY.290.000032
ORF1ab/nsp3255G255VgGagTa55AY.340.000485
ORF1ab/nsp3255G255GggAggG55AY.390.000124
ORF1ab/nsp3255G255EgGagAa55AY.430.000022
ORF1ab/nsp3255G255GggAggT55AY.46.30.004669
ORF1ab/nsp3255G255EgGagAa55B.1.10.000091
ORF1ab/nsp3255G255GggAggG45B.1.1770.000053
ORF1ab/nsp3255G255GggAggC15B.1.1770.000013
ORF1ab/nsp3255G255RGgaAga55B.1.36.290.002587
ORF1ab/nsp3255G255GggAggG45B.1.5960.000349
ORF1ab/nsp3255G255GggAggC15B.1.5960.000087
ORF1ab/nsp3255G255RGgaAga55P.1.140.000239
ORF1ab/nsp3255G255RGgaAga44AY.1000.000184
ORF1ab/nsp3255G255VgGagTa44AY.1190.000141
ORF1ab/nsp3255G255RGgaAga44AY.1200.000149
ORF1ab/nsp3255G255GggAggG44AY.1210.000541
ORF1ab/nsp3255G255VgGagTa44AY.200.000155
ORF1ab/nsp3255G255RGgaAga44AY.230.000279
ORF1ab/nsp3255G255AgGagCa44AY.250.000024
ORF1ab/nsp3255G255VgGagTa44AY.290.000063
ORF1ab/nsp3255G255VgGagTa44AY.610.000419
ORF1ab/nsp3255G255EgGagAa44B.1.20.000035
ORF1ab/nsp3255G255VgGagTa44B.1.2580.000266
ORF1ab/nsp3255G255RGgaAga44B.1.3200.004981
ORF1ab/nsp3255G255GggAggG44B.1.3490.002859
ORF1ab/nsp3255G255VgGagTa44B.1.5950.001044
ORF1ab/nsp3255G255GggAggG44W.10.034783
ORF1ab/nsp3255G255GggAggG230.111111
ORF1ab/nsp3255G255GggAggT130.055556
ORF1ab/nsp3255G255VgGagTa33A.10.000846
ORF1ab/nsp3255G255EgGagAa33A.2.50.001497
ORF1ab/nsp3255G255EgGagAa33AY.1000.000138
ORF1ab/nsp3255G255EgGagAa33AY.1030.000019
ORF1ab/nsp3255G255VgGagTa33AY.1060.001005
ORF1ab/nsp3255G255GggAggG33AY.1080.003308
ORF1ab/nsp3255G255GggAggG33AY.1190.000106
ORF1ab/nsp3255G255EgGagAa33AY.200.000117
ORF1ab/nsp3255G255GggAggG23AY.30.00002
ORF1ab/nsp3255G255GggAggC13AY.30.00001
ORF1ab/nsp3255G255VgGagTa33AY.420.000121
ORF1ab/nsp3255G255EgGagAa33AY.440.000018
ORF1ab/nsp3255G255EgGagAa33AY.540.000286
ORF1ab/nsp3255G255VgGagTa33AY.550.002752
ORF1ab/nsp3255G255EgGagAa33AY.60.000123
ORF1ab/nsp3255G255delGGA---33B.1.1.330.001263
ORF1ab/nsp3255G255RGgaAga33B.1.160.270.045455
ORF1ab/nsp3255G255VgGagTa33B.1.2060.002447
ORF1ab/nsp3255G255VgGagTa23B.1.2210.000142
ORF1ab/nsp3255G255VgGAgTG13B.1.2210.000071
ORF1ab/nsp3255G255RGgaAga33B.1.2230.008333
ORF1ab/nsp3255G255VgGagTa33B.1.4290.000071
ORF1ab/nsp3255G255GggAggG33B.1.466.20.001174
ORF1ab/nsp3255G255RGgaAga33B.1.5250.000339
ORF1ab/nsp3255G255VgGagTa33B.1.5750.00091
ORF1ab/nsp3255G255VgGagTa33B.1.5770.002062
ORF1ab/nsp3255G255RGgaAga33B.1.6210.000266
ORF1ab/nsp3255G255GggAggG33B.310.011194
ORF1ab/nsp3255G255RGgaAga33C.350.002322
ORF1ab/nsp3255G255VgGagTa33D.20.000225
ORF1ab/nsp3255G255RGgaAga33L.30.010638
ORF1ab/nsp3255G255GggAggG33P.10.000047
ORF1ab/nsp3255G255delGGA---33P.1.150.000697
ORF1ab/nsp3255G255RGgaAga33Q.10.000379
ORF1ab/nsp3255G255EgGagAa120.055556
ORF1ab/nsp3255G255KGGAAAG120.055556
ORF1ab/nsp3255G255EgGAgAG120.055556
ORF1ab/nsp3255G255KGGaAAa120.055556
ORF1ab/nsp3255G255IGGaATa22All0
ORF1ab/nsp3255G255XGgaTga22All0
ORF1ab/nsp3255G255KGGAAAG12All0
ORF1ab/nsp3255G255KGGaAAa12All0
ORF1ab/nsp3255G255GggAggG22AY.1000.000092
ORF1ab/nsp3255G255EgGagAa22AY.1020.000053
ORF1ab/nsp3255G255RGgaAga22AY.1090.001479
ORF1ab/nsp3255G255RGgaAga22AY.1130.000285
ORF1ab/nsp3255G255VgGagTa22AY.1180.000125
ORF1ab/nsp3255G255VgGagTa22AY.120.000632
ORF1ab/nsp3255G255GggAggG22AY.1200.000074
ORF1ab/nsp3255G255RGgaAga22AY.130.000322
ORF1ab/nsp3255G255AgGagCa22AY.200.000078
ORF1ab/nsp3255G255delGGA---22AY.250.000012
ORF1ab/nsp3255G255EgGagAa22AY.3.10.000171
ORF1ab/nsp3255G255EgGagAa22AY.390.000049
ORF1ab/nsp3255G255RGgaAga22AY.39.10.000079
ORF1ab/nsp3255G255VgGagTa22AY.39.10.000079
ORF1ab/nsp3255G255VgGagTa22AY.4.20.000043
ORF1ab/nsp3255G255VgGagTa22AY.4.40.000818
ORF1ab/nsp3255G255GggAggG22AY.420.00008
ORF1ab/nsp3255G255EgGagAa22AY.450.000243
ORF1ab/nsp3255G255RGgaAga22AY.450.000243
ORF1ab/nsp3255G255GggAggC12AY.470.000031
ORF1ab/nsp3255G255GggAggG12AY.470.000031
ORF1ab/nsp3255G255RGgaAga22AY.50.000041
ORF1ab/nsp3255G255GggAggG22AY.50.000041
ORF1ab/nsp3255G255RGgaAga22AY.5.30.000675
ORF1ab/nsp3255G255GggAggG22AY.570.001312
ORF1ab/nsp3255G255RGgaAga22AY.60.000082
ORF1ab/nsp3255G255VgGagTa22AY.700.000417
ORF1ab/nsp3255G255VgGagTa22AY.740.000231
ORF1ab/nsp3255G255VgGagTa22AY.750.000112
ORF1ab/nsp3255G255VgGagTa22AY.75.10.000361
ORF1ab/nsp3255G255VgGagTa22AY.840.000875
ORF1ab/nsp3255G255VgGagTa22AY.930.000546
ORF1ab/nsp3255G255GggAggG22AY.99.20.000184
ORF1ab/nsp3255G255VgGagTa22B.1.1.2140.000111
ORF1ab/nsp3255G255RGgaAga22B.1.1.2140.000111
ORF1ab/nsp3255G255RGgaAga22B.1.1.280.000622
ORF1ab/nsp3255G255GggAggG12B.1.1.3170.000412
ORF1ab/nsp3255G255GggAggT12B.1.1.3170.000412
ORF1ab/nsp3255G255VgGagTa22B.1.1.5250.010929
ORF1ab/nsp3255G255delGGA---22B.1.1.70.000002
ORF1ab/nsp3255G255AgGagCa22B.1.1.70.000002
ORF1ab/nsp3255G255RGgaAga22B.1.160.160.001859
ORF1ab/nsp3255G255RGgaAga22B.1.177.80.001505
ORF1ab/nsp3255G255RGgaAga12B.1.2210.000071
ORF1ab/nsp3255G255RGgAAgG12B.1.2210.000071
ORF1ab/nsp3255G255VgGagTa22B.1.2430.000139
ORF1ab/nsp3255G255EgGagAa22B.1.2580.000133
ORF1ab/nsp3255G255VgGagTa22B.1.3240.00321
ORF1ab/nsp3255G255RGgaAga22B.1.3510.000059
ORF1ab/nsp3255G255VgGagTa22B.1.36.180.00084
ORF1ab/nsp3255G255VgGagTa22B.1.36.290.001035
ORF1ab/nsp3255G255EgGagAa22B.1.4270.000101
ORF1ab/nsp3255G255RGgaAga22B.1.4700.002809
ORF1ab/nsp3255G255EgGagAa22B.1.5210.00995
ORF1ab/nsp3255G255EgGagAa22B.1.5250.000226
ORF1ab/nsp3255G255RGgaAga22B.1.5610.000794
ORF1ab/nsp3255G255GggAggG22B.1.5770.001375
ORF1ab/nsp3255G255EgGagAa22B.1.5950.000522
ORF1ab/nsp3255G255RGgaAga22B.1.5960.000174
ORF1ab/nsp3255G255VgGagTa22B.1.6030.021277
ORF1ab/nsp3255G255GggAggT22B.1.6200.001892
ORF1ab/nsp3255G255RGgaAga22B.1.6250.004706
ORF1ab/nsp3255G255XGgaTga22D.20.00015
ORF1ab/nsp3255G255delGGA---22N.60.014184
ORF1ab/nsp3255G255VgGagTa22P.1.10.10.01626
ORF1ab/nsp3255G255EgGagAa22P.1.120.000968
ORF1ab/nsp3255G255RGgaAga22P.1.150.000465
ORF1ab/nsp3255G255GggAggG22P.1.170.000324
ORF1ab/nsp3255G255AgGagCa22P.1.70.000639
ORF1ab/nsp3255G255RGgaAga22Q.80.00033
ORF1ab/nsp3255G255SGgAAgT110.055556
ORF1ab/nsp3255G255VgGagTa11A.2.30.004739
ORF1ab/nsp3255G255RGgaAga11A.2.50.000499
ORF1ab/nsp3255G255AgGagCa11A.270.001656
ORF1ab/nsp3255G255VgGagTa11A.280.002646
ORF1ab/nsp3255G255VgGagTa11AA.10.007246
ORF1ab/nsp3255G255del2gGAg--11All0
ORF1ab/nsp3255G255SGgAAgT11All0
ORF1ab/nsp3255G255MGGAATG11All0
ORF1ab/nsp3255G255GggAggG11AW.10.003049
ORF1ab/nsp3255G255RGgaAga11AY.10.000396
ORF1ab/nsp3255G255delGGA---11AY.1000.000046
ORF1ab/nsp3255G255VgGagTa11AY.1010.00049
ORF1ab/nsp3255G255GggAggG11AY.1010.00049
ORF1ab/nsp3255G255GggAggT11AY.1020.000027
ORF1ab/nsp3255G255VgGagTa11AY.1080.001103
ORF1ab/nsp3255G255delGGA---11AY.110.001339
ORF1ab/nsp3255G255EgGagAa11AY.1100.000113
ORF1ab/nsp3255G255EgGagAa11AY.1130.000142
ORF1ab/nsp3255G255GggAggG11AY.1160.000287
ORF1ab/nsp3255G255VgGagTa11AY.1160.000287
ORF1ab/nsp3255G255VgGagTa11AY.1170.000085
ORF1ab/nsp3255G255EgGagAa11AY.1210.000135
ORF1ab/nsp3255G255GggAggG11AY.130.000161
ORF1ab/nsp3255G255del1ggAgg-11AY.160.00038
ORF1ab/nsp3255G255RGgaAga11AY.160.00038
ORF1ab/nsp3255G255EgGagAa11AY.16.10.00047
ORF1ab/nsp3255G255RGgaAga11AY.16.10.00047
ORF1ab/nsp3255G255EgGagAa11AY.20.000356
ORF1ab/nsp3255G255RGgaAga11AY.200.000039
ORF1ab/nsp3255G255GggAggG11AY.200.000039
ORF1ab/nsp3255G255EgGagAa11AY.230.00007
ORF1ab/nsp3255G255GggAggG11AY.230.00007
ORF1ab/nsp3255G255delGGA---11AY.240.000431
ORF1ab/nsp3255G255GggAggG11AY.260.000028
ORF1ab/nsp3255G255VgGagTa11AY.260.000028
ORF1ab/nsp3255G255AgGagCa11AY.260.000028
ORF1ab/nsp3255G255EgGagAa11AY.290.000016
ORF1ab/nsp3255G255GggAggG11AY.29.10.000221
ORF1ab/nsp3255G255VgGagTa11AY.29.10.000221
ORF1ab/nsp3255G255GggAggG11AY.3.10.000085
ORF1ab/nsp3255G255EgGagAa11AY.300.000396
ORF1ab/nsp3255G255EgGagAa11AY.350.000233
ORF1ab/nsp3255G255GggAggG11AY.4.2.10.000149
ORF1ab/nsp3255G255EgGagAa11AY.4.50.000107
ORF1ab/nsp3255G255VgGagTa11AY.4.50.000107
ORF1ab/nsp3255G255GggAggT11AY.4.50.000107
ORF1ab/nsp3255G255RGgaAga11AY.420.00004
ORF1ab/nsp3255G255EgGagAa11AY.420.00004
ORF1ab/nsp3255G255IGGaATa11AY.430.000004
ORF1ab/nsp3255G255AgGagCa11AY.430.000004
ORF1ab/nsp3255G255del1Gga-ga11AY.440.000006
ORF1ab/nsp3255G255VgGagTa11AY.450.000122
ORF1ab/nsp3255G255RGgaAga11AY.460.000104
ORF1ab/nsp3255G255RGgaAga11AY.46.10.001027
ORF1ab/nsp3255G255EgGagAa11AY.46.50.000198
ORF1ab/nsp3255G255GggAggG11AY.46.60.000072
ORF1ab/nsp3255G255VgGagTa11AY.5.30.000337
ORF1ab/nsp3255G255RGgaAga11AY.5.40.000277
ORF1ab/nsp3255G255GggAggG11AY.550.000917
ORF1ab/nsp3255G255VgGagTa11AY.560.001605
ORF1ab/nsp3255G255VgGagTa11AY.60.000041
ORF1ab/nsp3255G255VgGagTa11AY.650.000533
ORF1ab/nsp3255G255GggAggG11AY.690.000187
ORF1ab/nsp3255G255RGgaAga11AY.7.10.000113
ORF1ab/nsp3255G255VgGagTa11AY.710.000475
ORF1ab/nsp3255G255EgGagAa11AY.750.000056
ORF1ab/nsp3255G255GggAggG11AY.75.10.00018
ORF1ab/nsp3255G255EgGagAa11AY.850.000427
ORF1ab/nsp3255G255RGgaAga11AY.850.000427
ORF1ab/nsp3255G255RGgaAga11AY.870.000833
ORF1ab/nsp3255G255delGGA---11AY.90.000068
ORF1ab/nsp3255G255EgGagAa11AY.90.000068
ORF1ab/nsp3255G255VgGagTa11AY.9.10.000084
ORF1ab/nsp3255G255delGGA---11AY.920.000287
ORF1ab/nsp3255G255RGgaAga11AY.930.000273
ORF1ab/nsp3255G255EgGagAa11AY.980.000079
ORF1ab/nsp3255G255VgGagTa11AY.980.000079
ORF1ab/nsp3255G255EgGagAa11AY.98.10.000048
ORF1ab/nsp3255G255RGgaAga11AY.99.20.000092
ORF1ab/nsp3255G255VgGagTa11AY.99.20.000092
ORF1ab/nsp3255G255GggAggG11B0.000128
ORF1ab/nsp3255G255RGgaAga11B0.000128
ORF1ab/nsp3255G255del1Gga-ga11B.10.000009
ORF1ab/nsp3255G255AgGagCa11B.1.10.000018
ORF1ab/nsp3255G255delGGA---11B.1.10.000018
ORF1ab/nsp3255G255RGgaAga11B.1.1.1290.009174
ORF1ab/nsp3255G255delGGA---11B.1.1.1390.022727
ORF1ab/nsp3255G255VgGagTa11B.1.1.1530.001095
ORF1ab/nsp3255G255GggAggG11B.1.1.2140.000055
ORF1ab/nsp3255G255RGgaAga11B.1.1.2160.00089
ORF1ab/nsp3255G255RGgaAga11B.1.1.2220.000204
ORF1ab/nsp3255G255VgGagTa11B.1.1.2790.001121
ORF1ab/nsp3255G255VgGagTa11B.1.1.2880.001916
ORF1ab/nsp3255G255RGgaAga11B.1.1.3060.000438
ORF1ab/nsp3255G255GggAggC11B.1.1.3060.000438
ORF1ab/nsp3255G255VgGagTa11B.1.1.3060.000438
ORF1ab/nsp3255G255RGgaAga11B.1.1.3170.000412
ORF1ab/nsp3255G255VgGagTa11B.1.1.3180.000302
ORF1ab/nsp3255G255RGgaAga11B.1.1.3180.000302
ORF1ab/nsp3255G255EgGagAa11B.1.1.330.000421
ORF1ab/nsp3255G255EgGagAa11B.1.1.3360.016667
ORF1ab/nsp3255G255RGgaAga11B.1.1.3480.000796
ORF1ab/nsp3255G255delGGA---11B.1.1.3480.000796
ORF1ab/nsp3255G255RGgaAga11B.1.1.3490.010309
ORF1ab/nsp3255G255VgGagTa11B.1.1.3620.005618
ORF1ab/nsp3255G255GggAggG11B.1.1.3690.000446
ORF1ab/nsp3255G255EgGagAa11B.1.1.370.000193
ORF1ab/nsp3255G255EgGagAa11B.1.1.3700.012658
ORF1ab/nsp3255G255VgGagTa11B.1.1.3700.012658
ORF1ab/nsp3255G255VgGagTa11B.1.1.3720.000689
ORF1ab/nsp3255G255VgGagTa11B.1.1.390.00051
ORF1ab/nsp3255G255EgGagAa11B.1.1.440.00241
ORF1ab/nsp3255G255del1Gga-ga11B.1.1.470.005348
ORF1ab/nsp3255G255RGgaAga11B.1.1.5190.00004
ORF1ab/nsp3255G255VgGagTa11B.1.1.5230.001563
ORF1ab/nsp3255G255del1ggAgg-11B.1.1.70.000001
ORF1ab/nsp3255G255del2gGAg--11B.1.1.70.000001
ORF1ab/nsp3255G255GggAggG11B.1.1.700.000341
ORF1ab/nsp3255G255EgGagAa11B.1.1190.010526
ORF1ab/nsp3255G255RGgaAga11B.1.1390.000733
ORF1ab/nsp3255G255VgGagTa11B.1.1600.000031
ORF1ab/nsp3255G255RGgaAga11B.1.177.150.000631
ORF1ab/nsp3255G255VgGagTa11B.1.177.210.000076
ORF1ab/nsp3255G255RGgaAga11B.1.177.210.000076
ORF1ab/nsp3255G255VgGagTa11B.1.177.40.000211
ORF1ab/nsp3255G255RGgaAga11B.1.177.520.001757
ORF1ab/nsp3255G255RGgaAga11B.1.177.570.000281
ORF1ab/nsp3255G255RGgaAga11B.1.177.600.000218
ORF1ab/nsp3255G255GggAggC11B.1.177.720.00339
ORF1ab/nsp3255G255RGgaAga11B.1.177.730.000566
ORF1ab/nsp3255G255GggAggG11B.1.177.750.001041
ORF1ab/nsp3255G255RGgaAga11B.1.1890.004292
ORF1ab/nsp3255G255EgGagAa11B.1.2010.005682
ORF1ab/nsp3255G255EgGagAa11B.1.2060.000816
ORF1ab/nsp3255G255GggAggG11B.1.2060.000816
ORF1ab/nsp3255G255GggAggG11B.1.2210.000071
ORF1ab/nsp3255G255IGGaATa11B.1.2210.000071
ORF1ab/nsp3255G255MGGAATG11B.1.2210.000071
ORF1ab/nsp3255G255RGgaAga11B.1.221.10.002907
ORF1ab/nsp3255G255VgGagTa11B.1.2320.000537
ORF1ab/nsp3255G255VgGagTa11B.1.2400.000216
ORF1ab/nsp3255G255RGgaAga11B.1.2400.000216
ORF1ab/nsp3255G255EgGagAa11B.1.2430.00007
ORF1ab/nsp3255G255GggAggG11B.1.2430.00007
ORF1ab/nsp3255G255VgGagTa11B.1.2810.021739
ORF1ab/nsp3255G255RGgaAga11B.1.2910.019231
ORF1ab/nsp3255G255RGgaAga11B.1.3090.047619
ORF1ab/nsp3255G255GggAggG11B.1.3110.000275
ORF1ab/nsp3255G255VgGagTa11B.1.3510.00003
ORF1ab/nsp3255G255RGgaAga11B.1.3570.009524
ORF1ab/nsp3255G255RGgaAga11B.1.360.000146
ORF1ab/nsp3255G255GggAggG11B.1.360.000146
ORF1ab/nsp3255G255del1Gga-ga11B.1.36.100.004785
ORF1ab/nsp3255G255RGgaAga11B.1.36.180.00042
ORF1ab/nsp3255G255GggAggT11B.1.36.220.001208
ORF1ab/nsp3255G255del1ggAgg-11B.1.36.290.000517
ORF1ab/nsp3255G255RGgaAga11B.1.3630.012987
ORF1ab/nsp3255G255RGgaCga11B.1.3960.000706
ORF1ab/nsp3255G255VgGagTa11B.1.3970.004854
ORF1ab/nsp3255G255GggAggT11B.1.3990.001934
ORF1ab/nsp3255G255EgGagAa11B.1.4040.001302
ORF1ab/nsp3255G255VgGagTa11B.1.4160.001269
ORF1ab/nsp3255G255GggAggG11B.1.4170.028571
ORF1ab/nsp3255G255RGgaAga11B.1.4250.002994
ORF1ab/nsp3255G255GggAggT11B.1.4270.00005
ORF1ab/nsp3255G255RGgaAga11B.1.4270.00005
ORF1ab/nsp3255G255EgGagAa11B.1.4290.000024
ORF1ab/nsp3255G255delGGA---11B.1.4290.000024
ORF1ab/nsp3255G255RGgaAga11B.1.4650.003802
ORF1ab/nsp3255G255RGgaAga11B.1.5410.004425
ORF1ab/nsp3255G255RGgaAga11B.1.5640.000426
ORF1ab/nsp3255G255VgGagTa11B.1.564.10.001577
ORF1ab/nsp3255G255EgGagAa11B.1.5800.004065
ORF1ab/nsp3255G255GggAggG11B.1.6090.000479
ORF1ab/nsp3255G255EgGagAa11B.1.6100.003546
ORF1ab/nsp3255G255del1ggAgg-11B.1.617.10.000129
ORF1ab/nsp3255G255delGGA---11B.1.617.20.000004
ORF1ab/nsp3255G255delGGA---11B.1.6210.000089
ORF1ab/nsp3255G255VgGagTa11B.1.6210.000089
ORF1ab/nsp3255G255EgGagAa11B.1.621.10.000506
ORF1ab/nsp3255G255GggAggC11B.1.6230.000536
ORF1ab/nsp3255G255VgGagTa11B.1.6280.000352
ORF1ab/nsp3255G255VgGagTa11B.1.6360.006711
ORF1ab/nsp3255G255RGgaAga11B.1.6370.000073
ORF1ab/nsp3255G255EgGagAa11B.1.6370.000073
ORF1ab/nsp3255G255VgGagTa11B.1.6370.000073
ORF1ab/nsp3255G255EgGagAa11B.1.90.006173
ORF1ab/nsp3255G255GggAggG11B.1.90.006173
ORF1ab/nsp3255G255VgGagTa11B.400.000364
ORF1ab/nsp3255G255RGgaAga11B.6.10.026316
ORF1ab/nsp3255G255RGgaAga11B.6.60.000889
ORF1ab/nsp3255G255VgGagTa11B.6.60.000889
ORF1ab/nsp3255G255EgGagAa11C.360.000911
ORF1ab/nsp3255G255RGgaAga11C.36.3.10.002717
ORF1ab/nsp3255G255RGgaAga11C.370.000116
ORF1ab/nsp3255G255VgGagTa11C.370.000116
ORF1ab/nsp3255G255RGgaAga11N.30.005814
ORF1ab/nsp3255G255VgGagTa11N.60.007092
ORF1ab/nsp3255G255delGGA---11P.10.000016
ORF1ab/nsp3255G255EgGagAa11P.10.000016
ORF1ab/nsp3255G255EgGagAa11P.1.140.000048
ORF1ab/nsp3255G255EgGagAa11P.1.170.000162
ORF1ab/nsp3255G255VgGagTa11P.1.170.000162
ORF1ab/nsp3255G255GggAggT11P.20.000187
ORF1ab/nsp3255G255VgGagTa11Q.40.000455

CoV-GLUE is still in development. CoV-GLUE was originally developed as part of COG-UK by Josh Singer using the GLUE framework at the MRC-University of Glasgow Centre for Virus Research (CVR). In 2021 it was redeveloped by Richard Orton to scale to the millions of genome sequences available. We acknowledge support from the MRC (MC_UU_12014/12), WT (220977/Z/20/Z) and UKRI G2P (MR/W005611/1). Please contact Richard Orton with any queries: Richard.Orton@glasgow.ac.uk

CoV-GLUE uses sequence data from GISAID. GISAID data provided via this web application is subject to GISAID's Terms and Conditions.