CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF1ab/nsp3 : CodonNum = 253 & Codon = gtA

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF1ab/nsp3253V253VV1071VsyngtTgtA162810240.6289933476-3478

Details of the mutation no within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF1ab/nsp3253V253VgtTgtA10241628All0.000196
ORF1ab/nsp3253V253VgtTgtA777826AY.40.001209
ORF1ab/nsp3253V253VgtTgtA2482B.1.1.70.000021
ORF1ab/nsp3253V253VgtTgtA2649B.1.617.20.000098
ORF1ab/nsp3253V253VgtTgtA3236AY.30.000318
ORF1ab/nsp3253V253VgtTgtA3434B.1.1.2840.003652
ORF1ab/nsp3253V253VgtTgtA2626B.1.160.80.033505
ORF1ab/nsp3253V253VgtTgtA2424B.1.1.5190.000953
ORF1ab/nsp3253V253VgtTgtA322B.1.10.000054
ORF1ab/nsp3253V253VgtTgtA120AY.250.000006
ORF1ab/nsp3253V253VgtTgtA516AY.430.000022
ORF1ab/nsp3253V253VgtTgtA615B.1.5960.000523
ORF1ab/nsp3253V253VgtTgtA414B.10.000037
ORF1ab/nsp3253V253VgtTgtA112AY.440.000006
ORF1ab/nsp3253V253VgtTgtA612B.1.20.000053
ORF1ab/nsp3253V253VgtTgtA99B.1.2980.019027
ORF1ab/nsp3253V253VgtTgtA88B.1.1110.009401
ORF1ab/nsp3253V253VgtTgtA15B.1.1.3060.000438
ORF1ab/nsp3253V253VgtTgtA14AY.1030.000006
ORF1ab/nsp3253V253VgtTgtA24AY.450.000243
ORF1ab/nsp3253V253VgtTgtA13AY.390.000025
ORF1ab/nsp3253V253VgtTgtA33B.1.1.2310.009288
ORF1ab/nsp3253V253VgtTgtA13B.1.1770.000013
ORF1ab/nsp3253V253VgtTgtA33B.1.4290.000071
ORF1ab/nsp3253V253VgtTgtA120.055556
ORF1ab/nsp3253V253VgtTgtA22AY.680.000547
ORF1ab/nsp3253V253VgtTgtA22AY.980.000158
ORF1ab/nsp3253V253VgtTgtA22B.1.177.860.000367
ORF1ab/nsp3253V253VgtTgtA22B.1.5260.000047
ORF1ab/nsp3253V253VgtTgtA22P.1.140.000096
ORF1ab/nsp3253V253VgtTgtA22P.20.000373
ORF1ab/nsp3253V253VgtTgtA11A0.000387
ORF1ab/nsp3253V253VgtTgtA11AY.320.000532
ORF1ab/nsp3253V253VgtTgtA11AY.340.000097
ORF1ab/nsp3253V253VgtTgtA11AY.39.10.00004
ORF1ab/nsp3253V253VgtTgtA11AY.60.000041
ORF1ab/nsp3253V253VgtTgtA11AY.610.000105
ORF1ab/nsp3253V253VgtTgtA11AY.840.000437
ORF1ab/nsp3253V253VgtTgtA11B.1.1.370.000193
ORF1ab/nsp3253V253VgtTgtA11B.1.177.600.000218
ORF1ab/nsp3253V253VgtTgtA11B.1.2210.000071
ORF1ab/nsp3253V253VgtTgtA11B.1.3910.001127
ORF1ab/nsp3253V253VgtTgtA11B.1.4700.001404
ORF1ab/nsp3253V253VgtTgtA11C.370.000116