CoV-GLUEGenomeCountriesLineagesMutationsInsertionsDeletionsUpdated:

CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF1ab/nsp3 : CodonNum = 251

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF1ab/nsp3251G251EG1069EnonsyngGagAa78378313470-3472
ORF1ab/nsp3251G251RG1069RnonsynGgaAga6466320.9783283470-3472
ORF1ab/nsp3251G251RG1069RnonsynGgaCga64690.01393193470-3472
ORF1ab/nsp3251G251RG1069RnonsynGgAAgG64650.007739943470-3472
ORF1ab/nsp3251G251GG1069GsynggAggG5334070.7636023470-3472
ORF1ab/nsp3251G251GG1069GsynggAggC533760.1425893470-3472
ORF1ab/nsp3251G251GG1069GsynggAggT533500.09380863470-3472
ORF1ab/nsp3251G251VG1069VnonsyngGagTa1161150.9913793470-3472
ORF1ab/nsp3251G251VG1069VnonsyngGAgTG11610.008620693470-3472
ORF1ab/nsp3251G251delG1069deldelGGA---404013470-3472
ORF1ab/nsp3251G251XG1069XnonsynGgaTga101013470-3472
ORF1ab/nsp3251G251del1G1069del1delGga-ga2213470-3472
ORF1ab/nsp3251G251del2G1069del2delgGAg--210.53470-3472
ORF1ab/nsp3251G251del2G1069del2delGGa--a210.53470-3472
ORF1ab/nsp3251G251NG1069NnonsynGGAAAC1113470-3472
ORF1ab/nsp3251G251AG1069AnonsyngGagCa1113470-3472
ORF1ab/nsp3251G251KG1069KnonsynGGAAAG1113470-3472
ORF1ab/nsp3251G251WG1069WnonsynGgATgG1113470-3472
ORF1ab/nsp3251G251SG1069SnonsynGgAAgC1113470-3472

Details of the mutation no within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF1ab/nsp3251G251EgGagAa783783All0.00015
ORF1ab/nsp3251G251RGgaAga632646All0.000121
ORF1ab/nsp3251G251RGgaCga9646All0.000002
ORF1ab/nsp3251G251RGgAAgG5646All0.000001
ORF1ab/nsp3251G251GggAggG407533All0.000078
ORF1ab/nsp3251G251GggAggC76533All0.000015
ORF1ab/nsp3251G251GggAggT50533All0.00001
ORF1ab/nsp3251G251EgGagAa390390B.1.1.70.000349
ORF1ab/nsp3251G251EgGagAa124124AY.40.000193
ORF1ab/nsp3251G251VgGagTa115116All0.000022
ORF1ab/nsp3251G251VgGAgTG1116All0
ORF1ab/nsp3251G251RGgaAga8080B.1.1770.001053
ORF1ab/nsp3251G251GggAggG7479B.1.617.20.000279
ORF1ab/nsp3251G251GggAggT579B.1.617.20.000019
ORF1ab/nsp3251G251RGgaAga7274B.1.1.70.000064
ORF1ab/nsp3251G251RGgaCga274B.1.1.70.000002
ORF1ab/nsp3251G251GggAggG6767AY.1020.001776
ORF1ab/nsp3251G251GggAggG6467AY.40.0001
ORF1ab/nsp3251G251GggAggC367AY.40.000005
ORF1ab/nsp3251G251RGgaAga6060B.1.1.2240.857143
ORF1ab/nsp3251G251RGgaAga5353AY.40.000082
ORF1ab/nsp3251G251RGgaAga4849B.1.20.000423
ORF1ab/nsp3251G251RGgaCga149B.1.20.000009
ORF1ab/nsp3251G251delGGA---4040All0.000008
ORF1ab/nsp3251G251GggAggG1739B.1.1.70.000015
ORF1ab/nsp3251G251GggAggC1239B.1.1.70.000011
ORF1ab/nsp3251G251GggAggT1039B.1.1.70.000009
ORF1ab/nsp3251G251RGgaAga3636AY.1030.000224
ORF1ab/nsp3251G251RGgaAga3535B.1.617.20.000132
ORF1ab/nsp3251G251RGgaAga3232AY.470.000995
ORF1ab/nsp3251G251EgGagAa3232B.1.5260.000752
ORF1ab/nsp3251G251GggAggC1730AY.250.000102
ORF1ab/nsp3251G251GggAggG1330AY.250.000078
ORF1ab/nsp3251G251EgGagAa2929AY.470.000902
ORF1ab/nsp3251G251GggAggG2828B.1.1.5070.243478
ORF1ab/nsp3251G251EgGagAa2424AY.690.00448
ORF1ab/nsp3251G251VgGagTa1920AY.1030.000118
ORF1ab/nsp3251G251VgGAgTG120AY.1030.000006
ORF1ab/nsp3251G251GggAggG1418B.10.000128
ORF1ab/nsp3251G251GggAggT318B.10.000027
ORF1ab/nsp3251G251GggAggC118B.10.000009
ORF1ab/nsp3251G251GggAggC1516AY.30.000149
ORF1ab/nsp3251G251GggAggG116AY.30.00001
ORF1ab/nsp3251G251RGgaAga1616AY.650.008529
ORF1ab/nsp3251G251EgGagAa1414B.1.4290.000329
ORF1ab/nsp3251G251VgGagTa1313B.10.000119
ORF1ab/nsp3251G251EgGagAa1212AY.30.000119
ORF1ab/nsp3251G251EgGagAa1212AY.46.60.000866
ORF1ab/nsp3251G251GggAggG1212AY.98.10.000581
ORF1ab/nsp3251G251GggAggG1212B.1.9.40.07362
ORF1ab/nsp3251G251RGgaAga1212P.10.000189
ORF1ab/nsp3251G251EgGagAa1111AY.330.000735
ORF1ab/nsp3251G251GggAggG611AY.440.000037
ORF1ab/nsp3251G251GggAggT511AY.440.00003
ORF1ab/nsp3251G251GggAggG1111B.1.4270.000555
ORF1ab/nsp3251G251XGgaTga1010All0.000002
ORF1ab/nsp3251G251RGgaAga1010B.1.1.3170.004117
ORF1ab/nsp3251G251EgGagAa1010B.1.617.20.000038
ORF1ab/nsp3251G251GggAggC79AY.1030.000043
ORF1ab/nsp3251G251GggAggT19AY.1030.000006
ORF1ab/nsp3251G251GggAggG19AY.1030.000006
ORF1ab/nsp3251G251RGgaAga99AY.250.000054
ORF1ab/nsp3251G251EgGagAa99AY.250.000054
ORF1ab/nsp3251G251GggAggG69AY.50.000124
ORF1ab/nsp3251G251GggAggT39AY.50.000062
ORF1ab/nsp3251G251RGgaAga89B.10.000073
ORF1ab/nsp3251G251RGgaCga19B.10.000009
ORF1ab/nsp3251G251RGgaAga89B.1.10.000145
ORF1ab/nsp3251G251RGgaCga19B.1.10.000018
ORF1ab/nsp3251G251VgGagTa99B.1.1.70.000008
ORF1ab/nsp3251G251RGgaAga88B.1.4000.003432
ORF1ab/nsp3251G251VgGagTa88R.10.00072
ORF1ab/nsp3251G251RGgaAga77AY.290.00011
ORF1ab/nsp3251G251VgGagTa77AY.40.000011
ORF1ab/nsp3251G251delGGA---77B.10.000064
ORF1ab/nsp3251G251GggAggT57B.1.10.000091
ORF1ab/nsp3251G251GggAggG17B.1.10.000018
ORF1ab/nsp3251G251GggAggC17B.1.10.000018
ORF1ab/nsp3251G251RGgaAga67B.1.2210.000426
ORF1ab/nsp3251G251RGgAAgG17B.1.2210.000071
ORF1ab/nsp3251G251EgGagAa77P.10.00011
ORF1ab/nsp3251G251RGgaAga360.166667
ORF1ab/nsp3251G251RGgAAgG360.166667
ORF1ab/nsp3251G251RGgaAga66AY.330.000401
ORF1ab/nsp3251G251EgGagAa66AY.39.10.000238
ORF1ab/nsp3251G251RGgaAga66AY.430.000027
ORF1ab/nsp3251G251RGgaAga66AY.440.000037
ORF1ab/nsp3251G251VgGagTa66AY.460.000624
ORF1ab/nsp3251G251EgGagAa66B.1.10.000109
ORF1ab/nsp3251G251GggAggC36B.1.20.000026
ORF1ab/nsp3251G251GggAggG26B.1.20.000018
ORF1ab/nsp3251G251GggAggT16B.1.20.000009
ORF1ab/nsp3251G251RGgaAga66B.1.5960.000523
ORF1ab/nsp3251G251EgGagAa66B.1.6370.000438
ORF1ab/nsp3251G251GggAggG550.277778
ORF1ab/nsp3251G251GggAggC45AY.260.000113
ORF1ab/nsp3251G251GggAggG15AY.260.000028
ORF1ab/nsp3251G251RGgaAga55AY.30.00005
ORF1ab/nsp3251G251VgGagTa55AY.330.000334
ORF1ab/nsp3251G251GggAggG55AY.99.20.000461
ORF1ab/nsp3251G251RGgaAga55B.1.2430.000348
ORF1ab/nsp3251G251RGgaAga55B.1.5260.000118
ORF1ab/nsp3251G251GggAggG55B.40.011038
ORF1ab/nsp3251G251GggAggG55P.1.140.000239
ORF1ab/nsp3251G251RGgaAga45Q.80.00066
ORF1ab/nsp3251G251RGgAAgG15Q.80.000165
ORF1ab/nsp3251G251GggAggG44AY.1000.000184
ORF1ab/nsp3251G251EgGagAa44AY.1020.000106
ORF1ab/nsp3251G251EgGagAa44AY.1030.000025
ORF1ab/nsp3251G251RGgaAga44AY.340.000388
ORF1ab/nsp3251G251GggAggG44AY.390.000099
ORF1ab/nsp3251G251RGgaAga44AY.4.20.000087
ORF1ab/nsp3251G251EgGagAa44B.10.000037
ORF1ab/nsp3251G251GggAggG44B.1.1.2540.044944
ORF1ab/nsp3251G251RGgaAga44B.1.1.5190.000159
ORF1ab/nsp3251G251EgGagAa44B.1.1770.000053
ORF1ab/nsp3251G251GggAggC44B.1.2430.000278
ORF1ab/nsp3251G251EgGagAa44B.1.258.170.000416
ORF1ab/nsp3251G251EgGagAa44B.1.36.10.004561
ORF1ab/nsp3251G251EgGagAa44B.1.4270.000202
ORF1ab/nsp3251G251GggAggT34B.1.5960.000261
ORF1ab/nsp3251G251GggAggC14B.1.5960.000087
ORF1ab/nsp3251G251delGGA---44B.1.617.20.000015
ORF1ab/nsp3251G251VgGagTa44B.1.617.20.000015
ORF1ab/nsp3251G251RGgaAga44R.10.00036
ORF1ab/nsp3251G251VgGagTa33AY.1190.000106
ORF1ab/nsp3251G251VgGagTa33AY.250.000018
ORF1ab/nsp3251G251RGgaAga33AY.390.000074
ORF1ab/nsp3251G251EgGagAa33AY.4.20.000065
ORF1ab/nsp3251G251RGgaAga33AY.50.000062
ORF1ab/nsp3251G251EgGagAa33AY.70.000588
ORF1ab/nsp3251G251EgGagAa33AY.750.000168
ORF1ab/nsp3251G251RGgaAga33AY.75.10.000541
ORF1ab/nsp3251G251EgGagAa33AY.90.000203
ORF1ab/nsp3251G251RGgaAga33AY.90.000203
ORF1ab/nsp3251G251RGgaAga33AY.99.10.004658
ORF1ab/nsp3251G251delGGA---33B.1.1.330.001263
ORF1ab/nsp3251G251delGGA---33B.1.1.70.000003
ORF1ab/nsp3251G251RGgaAga23B.1.258.170.000208
ORF1ab/nsp3251G251RGgaCga13B.1.258.170.000104
ORF1ab/nsp3251G251RGgaAga33B.1.258.20.013514
ORF1ab/nsp3251G251RGgaAga33B.1.3510.000089
ORF1ab/nsp3251G251VgGagTa33B.1.4270.000151
ORF1ab/nsp3251G251GggAggG33C.290.1875
ORF1ab/nsp3251G251XGgaTga33D.20.000225
ORF1ab/nsp3251G251VgGagTa33P.10.000047
ORF1ab/nsp3251G251delGGA---33P.1.150.000697
ORF1ab/nsp3251G251VgGagTa22AB.10.016393
ORF1ab/nsp3251G251del1Gga-ga22All0
ORF1ab/nsp3251G251del2GGa--a12All0
ORF1ab/nsp3251G251del2gGAg--12All0
ORF1ab/nsp3251G251RGgaAga22AY.1100.000225
ORF1ab/nsp3251G251RGgaAga22AY.1130.000285
ORF1ab/nsp3251G251GggAggG22AY.1160.000574
ORF1ab/nsp3251G251VgGagTa22AY.1170.000169
ORF1ab/nsp3251G251GggAggT12AY.1180.000063
ORF1ab/nsp3251G251GggAggG12AY.1180.000063
ORF1ab/nsp3251G251EgGagAa22AY.140.000176
ORF1ab/nsp3251G251RGgaAga22AY.200.000078
ORF1ab/nsp3251G251EgGagAa22AY.200.000078
ORF1ab/nsp3251G251GggAggG22AY.230.000139
ORF1ab/nsp3251G251delGGA---22AY.250.000012
ORF1ab/nsp3251G251EgGagAa22AY.360.000296
ORF1ab/nsp3251G251VgGagTa22AY.380.000999
ORF1ab/nsp3251G251GggAggT12AY.430.000004
ORF1ab/nsp3251G251GggAggG12AY.430.000004
ORF1ab/nsp3251G251EgGagAa22AY.440.000012
ORF1ab/nsp3251G251RGgaAga22AY.590.001059
ORF1ab/nsp3251G251GggAggG22AY.690.000373
ORF1ab/nsp3251G251RGgaAga22AY.730.001331
ORF1ab/nsp3251G251GggAggG22AY.840.000875
ORF1ab/nsp3251G251RGgaAga22B.1.1.1590.009346
ORF1ab/nsp3251G251GggAggT22B.1.1.5190.000079
ORF1ab/nsp3251G251EgGagAa22B.1.1.5190.000079
ORF1ab/nsp3251G251EgGagAa22B.1.160.200.017857
ORF1ab/nsp3251G251VgGagTa22B.1.1770.000026
ORF1ab/nsp3251G251VgGagTa22B.1.20.000018
ORF1ab/nsp3251G251EgGagAa22B.1.3510.000059
ORF1ab/nsp3251G251VgGagTa22B.1.3690.00057
ORF1ab/nsp3251G251RGgaAga22B.1.4290.000047
ORF1ab/nsp3251G251GggAggG22B.1.4290.000047
ORF1ab/nsp3251G251VgGagTa22B.1.466.20.000782
ORF1ab/nsp3251G251GggAggG22B.1.4990.002101
ORF1ab/nsp3251G251GggAggG22B.1.5090.001732
ORF1ab/nsp3251G251RGgaAga22B.1.5250.000226
ORF1ab/nsp3251G251GggAggT22B.1.5640.000852
ORF1ab/nsp3251G251EgGagAa22B.1.595.40.014599
ORF1ab/nsp3251G251GggAggG22C.370.000232
ORF1ab/nsp3251G251VgGagTa22D.20.00015
ORF1ab/nsp3251G251EgGagAa22N.50.003534
ORF1ab/nsp3251G251delGGA---22N.60.014184
ORF1ab/nsp3251G251GggAggC22P.10.000032
ORF1ab/nsp3251G251EgGagAa22P.1.120.000968
ORF1ab/nsp3251G251XGgaTga110.055556
ORF1ab/nsp3251G251WGgATgG110.055556
ORF1ab/nsp3251G251VgGagTa11A0.000387
ORF1ab/nsp3251G251EgGagAa11A.70.055556
ORF1ab/nsp3251G251SGgAAgC11All0
ORF1ab/nsp3251G251WGgATgG11All0
ORF1ab/nsp3251G251NGGAAAC11All0
ORF1ab/nsp3251G251KGGAAAG11All0
ORF1ab/nsp3251G251AgGagCa11All0
ORF1ab/nsp3251G251delGGA---11AY.1000.000046
ORF1ab/nsp3251G251RGgaAga11AY.1020.000027
ORF1ab/nsp3251G251EgGagAa11AY.1060.000335
ORF1ab/nsp3251G251delGGA---11AY.110.001339
ORF1ab/nsp3251G251VgGagTa11AY.1130.000142
ORF1ab/nsp3251G251GggAggT11AY.1140.000231
ORF1ab/nsp3251G251RGgaAga11AY.1180.000063
ORF1ab/nsp3251G251del2gGAg--11AY.1200.000037
ORF1ab/nsp3251G251GggAggC11AY.130.000161
ORF1ab/nsp3251G251RGgaAga11AY.230.00007
ORF1ab/nsp3251G251EgGagAa11AY.230.00007
ORF1ab/nsp3251G251RGgaAga11AY.260.000028
ORF1ab/nsp3251G251VgGagTa11AY.260.000028
ORF1ab/nsp3251G251EgGagAa11AY.270.000065
ORF1ab/nsp3251G251VgGagTa11AY.30.00001
ORF1ab/nsp3251G251GggAggG11AY.3.10.000085
ORF1ab/nsp3251G251EgGagAa11AY.340.000097
ORF1ab/nsp3251G251GggAggC11AY.34.10.00051
ORF1ab/nsp3251G251GggAggC11AY.350.000233
ORF1ab/nsp3251G251RGgaAga11AY.350.000233
ORF1ab/nsp3251G251EgGagAa11AY.380.000499
ORF1ab/nsp3251G251RGgaAga11AY.380.000499
ORF1ab/nsp3251G251RGgaAga11AY.39.10.00004
ORF1ab/nsp3251G251delGGA---11AY.40.000002
ORF1ab/nsp3251G251GggAggG11AY.4.20.000022
ORF1ab/nsp3251G251VgGagTa11AY.4.20.000022
ORF1ab/nsp3251G251VgGagTa11AY.4.2.10.000149
ORF1ab/nsp3251G251EgGagAa11AY.400.000964
ORF1ab/nsp3251G251EgGagAa11AY.420.00004
ORF1ab/nsp3251G251EgGagAa11AY.430.000004
ORF1ab/nsp3251G251VgGagTa11AY.430.000004
ORF1ab/nsp3251G251delGGA---11AY.430.000004
ORF1ab/nsp3251G251GggAggG11AY.450.000122
ORF1ab/nsp3251G251RGgaAga11AY.450.000122
ORF1ab/nsp3251G251GggAggG11AY.46.20.000635
ORF1ab/nsp3251G251RGgaAga11AY.46.60.000072
ORF1ab/nsp3251G251GggAggT11AY.46.60.000072
ORF1ab/nsp3251G251GggAggT11AY.470.000031
ORF1ab/nsp3251G251VgGagTa11AY.470.000031
ORF1ab/nsp3251G251RGgaAga11AY.480.000465
ORF1ab/nsp3251G251EgGagAa11AY.50.000021
ORF1ab/nsp3251G251EgGagAa11AY.5.10.003759
ORF1ab/nsp3251G251RGgaAga11AY.5.40.000277
ORF1ab/nsp3251G251EgGagAa11AY.540.000095
ORF1ab/nsp3251G251RGgaAga11AY.580.000907
ORF1ab/nsp3251G251EgGagAa11AY.60.000041
ORF1ab/nsp3251G251GggAggT11AY.60.000041
ORF1ab/nsp3251G251delGGA---11AY.660.00107
ORF1ab/nsp3251G251GggAggG11AY.70.000196
ORF1ab/nsp3251G251delGGA---11AY.730.000665
ORF1ab/nsp3251G251GggAggG11AY.75.10.00018
ORF1ab/nsp3251G251RGgaAga11AY.780.001541
ORF1ab/nsp3251G251delGGA---11AY.90.000068
ORF1ab/nsp3251G251VgGagTa11AY.9.20.000037
ORF1ab/nsp3251G251GggAggG11AY.9.20.000037
ORF1ab/nsp3251G251VgGagTa11AY.980.000079
ORF1ab/nsp3251G251EgGagAa11AY.98.10.000048
ORF1ab/nsp3251G251XGgaTga11B0.000128
ORF1ab/nsp3251G251AgGagCa11B.10.000009
ORF1ab/nsp3251G251delGGA---11B.1.10.000018
ORF1ab/nsp3251G251delGGA---11B.1.1.1390.022727
ORF1ab/nsp3251G251RGgaAga11B.1.1.1890.001513
ORF1ab/nsp3251G251RGgaAga11B.1.1.2070.001182
ORF1ab/nsp3251G251GggAggG11B.1.1.2360.006897
ORF1ab/nsp3251G251XGgaTga11B.1.1.2530.002506
ORF1ab/nsp3251G251VgGagTa11B.1.1.2800.003086
ORF1ab/nsp3251G251RGgaAga11B.1.1.2800.003086
ORF1ab/nsp3251G251EgGagAa11B.1.1.2840.000107
ORF1ab/nsp3251G251GggAggG11B.1.1.2840.000107
ORF1ab/nsp3251G251GggAggT11B.1.1.3060.000438
ORF1ab/nsp3251G251KGGAAAG11B.1.1.3060.000438
ORF1ab/nsp3251G251RGgaAga11B.1.1.330.000421
ORF1ab/nsp3251G251delGGA---11B.1.1.3480.000796
ORF1ab/nsp3251G251RGgaAga11B.1.1.370.000193
ORF1ab/nsp3251G251GggAggG11B.1.1.4340.000349
ORF1ab/nsp3251G251GggAggG11B.1.1.4480.002033
ORF1ab/nsp3251G251GggAggG11B.1.1.4580.041667
ORF1ab/nsp3251G251VgGagTa11B.1.1.5190.00004
ORF1ab/nsp3251G251GggAggG11B.1.1.630.000386
ORF1ab/nsp3251G251del1Gga-ga11B.1.1.70.000001
ORF1ab/nsp3251G251SGgAAgC11B.1.1.70.000001
ORF1ab/nsp3251G251del2GGa--a11B.1.1.70.000001
ORF1ab/nsp3251G251XGgaTga11B.1.1.70.000001
ORF1ab/nsp3251G251VgGagTa11B.1.1.700.000341
ORF1ab/nsp3251G251RGgaAga11B.1.1260.001276
ORF1ab/nsp3251G251RGgaAga11B.1.1600.000031
ORF1ab/nsp3251G251GggAggC11B.1.1600.000031
ORF1ab/nsp3251G251GggAggG11B.1.1770.000013
ORF1ab/nsp3251G251EgGagAa11B.1.177.430.001477
ORF1ab/nsp3251G251XGgaTga11B.1.177.440.000519
ORF1ab/nsp3251G251GggAggT11B.1.177.550.002331
ORF1ab/nsp3251G251EgGagAa11B.1.177.810.000189
ORF1ab/nsp3251G251RGgaAga11B.1.177.820.000477
ORF1ab/nsp3251G251delGGA---11B.1.20.000009
ORF1ab/nsp3251G251GggAggG11B.1.2210.000071
ORF1ab/nsp3251G251RGgaAga11B.1.2580.000067
ORF1ab/nsp3251G251VgGagTa11B.1.2790.000514
ORF1ab/nsp3251G251EgGagAa11B.1.3020.013333
ORF1ab/nsp3251G251EgGagAa11B.1.3110.000275
ORF1ab/nsp3251G251GggAggG11B.1.3400.004292
ORF1ab/nsp3251G251GggAggG11B.1.3510.00003
ORF1ab/nsp3251G251RGgaAga11B.1.360.000146
ORF1ab/nsp3251G251EgGagAa11B.1.360.000146
ORF1ab/nsp3251G251RGgaAga11B.1.36.10.00114
ORF1ab/nsp3251G251GggAggT11B.1.36.280.005747
ORF1ab/nsp3251G251GggAggC11B.1.36.380.001642
ORF1ab/nsp3251G251EgGagAa11B.1.3670.000792
ORF1ab/nsp3251G251VgGagTa11B.1.4160.001269
ORF1ab/nsp3251G251GggAggG11B.1.4250.002994
ORF1ab/nsp3251G251RGgaCga11B.1.4270.00005
ORF1ab/nsp3251G251delGGA---11B.1.4290.000024
ORF1ab/nsp3251G251RGgaAga11B.1.438.10.000107
ORF1ab/nsp3251G251EgGagAa11B.1.4520.013699
ORF1ab/nsp3251G251EgGagAa11B.1.4620.007246
ORF1ab/nsp3251G251RGgaAga11B.1.4650.003802
ORF1ab/nsp3251G251EgGagAa11B.1.466.20.000391
ORF1ab/nsp3251G251RGgaCga11B.1.466.20.000391
ORF1ab/nsp3251G251VgGagTa11B.1.4970.000315
ORF1ab/nsp3251G251EgGagAa11B.1.4970.000315
ORF1ab/nsp3251G251EgGagAa11B.1.5250.000113
ORF1ab/nsp3251G251GggAggG11B.1.5260.000024
ORF1ab/nsp3251G251RGgaAga11B.1.5540.004405
ORF1ab/nsp3251G251RGgaCga11B.1.5610.000397
ORF1ab/nsp3251G251XGgaTga11B.1.5820.000491
ORF1ab/nsp3251G251del1Gga-ga11B.1.5960.000087
ORF1ab/nsp3251G251GggAggG11B.1.5990.00365
ORF1ab/nsp3251G251GggAggC11B.1.617.10.000129
ORF1ab/nsp3251G251RGgaAga11B.1.617.10.000129
ORF1ab/nsp3251G251NGGAAAC11B.1.617.20.000004
ORF1ab/nsp3251G251XGgaTga11B.1.617.20.000004
ORF1ab/nsp3251G251delGGA---11B.1.6210.000089
ORF1ab/nsp3251G251GggAggG11B.1.6280.000352
ORF1ab/nsp3251G251EgGagAa11B.1.6280.000352
ORF1ab/nsp3251G251delGGA---11B.1.6300.005236
ORF1ab/nsp3251G251EgGagAa11C.160.00106
ORF1ab/nsp3251G251delGGA---11C.170.055556
ORF1ab/nsp3251G251RGgaAga11C.370.000116
ORF1ab/nsp3251G251EgGagAa11L.10.001905
ORF1ab/nsp3251G251delGGA---11P.10.000016
ORF1ab/nsp3251G251EgGagAa11P.1.130.000898
ORF1ab/nsp3251G251RGgaAga11P.1.140.000048
ORF1ab/nsp3251G251RGgaAga11P.1.150.000232
ORF1ab/nsp3251G251GggAggG11P.1.150.000232
ORF1ab/nsp3251G251GggAggG11P.1.170.000162
ORF1ab/nsp3251G251EgGagAa11P.1.170.000162
ORF1ab/nsp3251G251GggAggT11P.1.70.000319
ORF1ab/nsp3251G251GggAggG11R.10.00009

CoV-GLUE is still in development. CoV-GLUE was originally developed as part of COG-UK by Josh Singer using the GLUE framework at the MRC-University of Glasgow Centre for Virus Research (CVR). In 2021 it was redeveloped by Richard Orton to scale to the millions of genome sequences available. We acknowledge support from the MRC (MC_UU_12014/12), WT (220977/Z/20/Z) and UKRI G2P (MR/W005611/1). Please contact Richard Orton with any queries: Richard.Orton@glasgow.ac.uk

CoV-GLUE uses sequence data from GISAID. GISAID data provided via this web application is subject to GISAID's Terms and Conditions.