CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF1ab/nsp3 : CodonNum = 238 & Codon = gtT

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF1ab/nsp3238V238VV1056VsyngtGgtT649660820.9362683431-3433

Details of the mutation no within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF1ab/nsp3238V238VgtGgtT60826496All0.001163
ORF1ab/nsp3238V238VgtGgtT35003500AY.390.08649
ORF1ab/nsp3238V238VgtGgtT13721384B.1.617.20.005166
ORF1ab/nsp3238V238VgtGgtT108214B.1.1.70.000097
ORF1ab/nsp3238V238VgtGgtT152163AY.40.000237
ORF1ab/nsp3238V238VgtGgtT159160AY.350.037054
ORF1ab/nsp3238V238VgtGgtT14118P.10.000221
ORF1ab/nsp3238V238VgtGgtT116116AY.1190.004096
ORF1ab/nsp3238V238VgtGgtT3571AY.250.000211
ORF1ab/nsp3238V238VgtGgtT4647AY.440.00028
ORF1ab/nsp3238V238VgtGgtT4141AY.1000.001886
ORF1ab/nsp3238V238VgtGgtT4141AY.1210.005548
ORF1ab/nsp3238V238VgtGgtT4041AY.430.000177
ORF1ab/nsp3238V238VgtGgtT2831AY.30.000278
ORF1ab/nsp3238V238VgtGgtT1523AY.230.001046
ORF1ab/nsp3238V238VgtGgtT2323B.1.36.220.027778
ORF1ab/nsp3238V238VgtGgtT2222AY.480.010233
ORF1ab/nsp3238V238VgtGgtT1521B.1.10.000272
ORF1ab/nsp3238V238VgtGgtT1818AY.16.10.008459
ORF1ab/nsp3238V238VgtGgtT1416AY.39.10.000555
ORF1ab/nsp3238V238VgtGgtT1516B.1.1770.000198
ORF1ab/nsp3238V238VgtGgtT1415AY.1030.000087
ORF1ab/nsp3238V238VgtGgtT815B.10.000073
ORF1ab/nsp3238V238VgtGgtT1414B.1.177.810.002651
ORF1ab/nsp3238V238VgtGgtT1012AY.1020.000265
ORF1ab/nsp3238V238VgtGgtT1212AY.980.000948
ORF1ab/nsp3238V238VgtGgtT1111AY.7.20.006152
ORF1ab/nsp3238V238VgtGgtT1111B.1.2400.002371
ORF1ab/nsp3238V238VgtGgtT1010AY.1170.000845
ORF1ab/nsp3238V238VgtGgtT610AY.470.000187
ORF1ab/nsp3238V238VgtGgtT99AY.1180.000564
ORF1ab/nsp3238V238VgtGgtT99AY.160.003417
ORF1ab/nsp3238V238VgtGgtT49B.1.20.000035
ORF1ab/nsp3238V238VgtGgtT88B.1.1.5250.043716
ORF1ab/nsp3238V238VgtGgtT77AY.530.002013
ORF1ab/nsp3238V238VgtGgtT47B.1.2430.000278
ORF1ab/nsp3238V238VgtGgtT77C.370.000812
ORF1ab/nsp3238V238VgtGgtT66B.1.177.550.013986
ORF1ab/nsp3238V238VgtGgtT66B.1.2580.000399
ORF1ab/nsp3238V238VgtGgtT36B.1.3510.000089
ORF1ab/nsp3238V238VgtGgtT66P.20.00112
ORF1ab/nsp3238V238VgtGgtT55AY.1080.005513
ORF1ab/nsp3238V238VgtGgtT55AY.610.000524
ORF1ab/nsp3238V238VgtGgtT55AY.90.000338
ORF1ab/nsp3238V238VgtGgtT24AY.270.000129
ORF1ab/nsp3238V238VgtGgtT44AY.450.000487
ORF1ab/nsp3238V238VgtGgtT44AY.460.000416
ORF1ab/nsp3238V238VgtGgtT44AY.9.20.000147
ORF1ab/nsp3238V238VgtGgtT44B0.000511
ORF1ab/nsp3238V238VgtGgtT44B.1.3490.002859
ORF1ab/nsp3238V238VgtGgtT44B.1.4290.000094
ORF1ab/nsp3238V238VgtGgtT44B.1.617.10.000516
ORF1ab/nsp3238V238VgtGgtT33AY.200.000117
ORF1ab/nsp3238V238VgtGgtT23AY.4.20.000043
ORF1ab/nsp3238V238VgtGgtT33AY.5.30.001012
ORF1ab/nsp3238V238VgtGgtT33AY.680.000821
ORF1ab/nsp3238V238VgtGgtT33B.1.1.390.001529
ORF1ab/nsp3238V238VgtGgtT33B.1.1.4340.001046
ORF1ab/nsp3238V238VgtGgtT23B.1.5960.000174
ORF1ab/nsp3238V238VgtGgtT33B.1.6210.000266
ORF1ab/nsp3238V238VgtGgtT33B.1.6370.000219
ORF1ab/nsp3238V238VgtGgtT12A0.000387
ORF1ab/nsp3238V238VgtGgtT22AY.1100.000225
ORF1ab/nsp3238V238VgtGgtT22AY.190.002281
ORF1ab/nsp3238V238VgtGgtT12AY.290.000016
ORF1ab/nsp3238V238VgtGgtT22AY.39.1.10.001449
ORF1ab/nsp3238V238VgtGgtT22AY.4.50.000215
ORF1ab/nsp3238V238VgtGgtT22AY.420.00008
ORF1ab/nsp3238V238VgtGgtT22AY.50.000041
ORF1ab/nsp3238V238VgtGgtT22AY.660.002139
ORF1ab/nsp3238V238VgtGgtT22AY.750.000112
ORF1ab/nsp3238V238VgtGgtT22AY.770.002255
ORF1ab/nsp3238V238VgtGgtT22AY.840.000875
ORF1ab/nsp3238V238VgtGgtT22B.1.1.10.000653
ORF1ab/nsp3238V238VgtGgtT22B.1.1.4640.002946
ORF1ab/nsp3238V238VgtGgtT12B.1.1600.000031
ORF1ab/nsp3238V238VgtGgtT22B.1.2180.010309
ORF1ab/nsp3238V238VgtGgtT22B.1.3110.000549
ORF1ab/nsp3238V238VgtGgtT22B.1.4270.000101
ORF1ab/nsp3238V238VgtGgtT22C.220.142857
ORF1ab/nsp3238V238VgtGgtT22P.1.100.000539
ORF1ab/nsp3238V238VgtGgtT22P.1.90.009615
ORF1ab/nsp3238V238VgtGgtT11AY.1090.00074
ORF1ab/nsp3238V238VgtGgtT11AY.1160.000287
ORF1ab/nsp3238V238VgtGgtT11AY.120.000316
ORF1ab/nsp3238V238VgtGgtT11AY.1200.000037
ORF1ab/nsp3238V238VgtGgtT11AY.260.000028
ORF1ab/nsp3238V238VgtGgtT11AY.330.000067
ORF1ab/nsp3238V238VgtGgtT11AY.340.000097
ORF1ab/nsp3238V238VgtGgtT11AY.360.000148
ORF1ab/nsp3238V238VgtGgtT11AY.4.40.000409
ORF1ab/nsp3238V238VgtGgtT11AY.46.50.000198
ORF1ab/nsp3238V238VgtGgtT11AY.46.60.000072
ORF1ab/nsp3238V238VgtGgtT11AY.560.001605
ORF1ab/nsp3238V238VgtGgtT11AY.570.000656
ORF1ab/nsp3238V238VgtGgtT11AY.60.000041
ORF1ab/nsp3238V238VgtGgtT11AY.670.000464
ORF1ab/nsp3238V238VgtGgtT11AY.740.000116
ORF1ab/nsp3238V238VgtGgtT11AY.920.000287
ORF1ab/nsp3238V238VgtGgtT11AY.930.000273
ORF1ab/nsp3238V238VgtGgtT11AY.960.002075
ORF1ab/nsp3238V238VgtGgtT11AY.98.10.000048
ORF1ab/nsp3238V238VgtGgtT11B.1.1.1570.000913
ORF1ab/nsp3238V238VgtGgtT11B.1.1.3720.000689
ORF1ab/nsp3238V238VgtGgtT11B.1.177.530.002392
ORF1ab/nsp3238V238VgtGgtT11B.1.2010.005682
ORF1ab/nsp3238V238VgtGgtT11B.1.258.170.000104
ORF1ab/nsp3238V238VgtGgtT11B.1.2600.003344
ORF1ab/nsp3238V238VgtGgtT11B.1.2650.001271
ORF1ab/nsp3238V238VgtGgtT11B.1.351.30.000876
ORF1ab/nsp3238V238VgtGgtT11B.1.3670.000792
ORF1ab/nsp3238V238VgtGgtT11B.1.3690.000285
ORF1ab/nsp3238V238VgtGgtT11B.1.4280.00102
ORF1ab/nsp3238V238VgtGgtT11B.1.5510.00129
ORF1ab/nsp3238V238VgtGgtT11B.1.6090.000479
ORF1ab/nsp3238V238VgtGgtT11Z.10.00289