CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF1ab/nsp3 : CodonNum = 238

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF1ab/nsp3238V238LV1056LnonsynGtgTtg756874990.9908833431-3433
ORF1ab/nsp3238V238LV1056LnonsynGtgCtg7568600.007928123431-3433
ORF1ab/nsp3238V238LV1056LnonsynGtGTtA756890.001189223431-3433
ORF1ab/nsp3238V238VV1056VsyngtGgtT649660820.9362683431-3433
ORF1ab/nsp3238V238VV1056VsyngtGgtA64964100.06311583431-3433
ORF1ab/nsp3238V238VV1056VsyngtGgtC649640.0006157643431-3433
ORF1ab/nsp3238V238MV1056MnonsynGtgAtg55955913431-3433
ORF1ab/nsp3238V238AV1056AnonsyngTggCg48470.9791673431-3433
ORF1ab/nsp3238V238AV1056AnonsyngTGgCA4810.02083333431-3433
ORF1ab/nsp3238V238delV1056deldelGTG---242413431-3433
ORF1ab/nsp3238V238del1V1056del1delgtGgt-630.53431-3433
ORF1ab/nsp3238V238del1V1056del1delgTgg-g620.3333333431-3433
ORF1ab/nsp3238V238del1V1056del1delGtg-tg610.1666673431-3433
ORF1ab/nsp3238V238GV1056GnonsyngTggGg540.83431-3433
ORF1ab/nsp3238V238GV1056GnonsyngTGgGT510.23431-3433
ORF1ab/nsp3238V238EV1056EnonsyngTggAg1113431-3433
ORF1ab/nsp3238V238TV1056TnonsynGTGACC1113431-3433
ORF1ab/nsp3238V238KV1056KnonsynGTGAAA1113431-3433

Details of the mutation no within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF1ab/nsp3238V238LGtgTtg74997568All0.001434
ORF1ab/nsp3238V238LGtgCtg607568All0.000011
ORF1ab/nsp3238V238LGtGTtA97568All0.000002
ORF1ab/nsp3238V238VgtGgtT60826496All0.001163
ORF1ab/nsp3238V238VgtGgtA4106496All0.000078
ORF1ab/nsp3238V238VgtGgtC46496All0.000001
ORF1ab/nsp3238V238VgtGgtT35003500AY.390.08649
ORF1ab/nsp3238V238LGtgTtg16511657AY.1030.010251
ORF1ab/nsp3238V238LGtgCtg61657AY.1030.000037
ORF1ab/nsp3238V238VgtGgtT13721384B.1.617.20.005166
ORF1ab/nsp3238V238VgtGgtA111384B.1.617.20.000041
ORF1ab/nsp3238V238VgtGgtC11384B.1.617.20.000004
ORF1ab/nsp3238V238LGtgTtg13101310B.1.36.271
ORF1ab/nsp3238V238LGtgTtg727727B.1.360.106069
ORF1ab/nsp3238V238LGtgTtg542562AY.40.000844
ORF1ab/nsp3238V238LGtgCtg20562AY.40.000031
ORF1ab/nsp3238V238MGtgAtg559559All0.000107
ORF1ab/nsp3238V238LGtgTtg549556B.1.1.70.000491
ORF1ab/nsp3238V238LGtgCtg7556B.1.1.70.000006
ORF1ab/nsp3238V238LGtgTtg244244AY.440.001485
ORF1ab/nsp3238V238LGtgTtg240241B.1.617.20.000904
ORF1ab/nsp3238V238LGtgCtg1241B.1.617.20.000004
ORF1ab/nsp3238V238VgtGgtT108214B.1.1.70.000097
ORF1ab/nsp3238V238VgtGgtA106214B.1.1.70.000095
ORF1ab/nsp3238V238LGtgTtg172181B.1.1.2940.217722
ORF1ab/nsp3238V238LGtGTtA9181B.1.1.2940.011392
ORF1ab/nsp3238V238VgtGgtT152163AY.40.000237
ORF1ab/nsp3238V238VgtGgtA11163AY.40.000017
ORF1ab/nsp3238V238VgtGgtT159160AY.350.037054
ORF1ab/nsp3238V238VgtGgtA1160AY.350.000233
ORF1ab/nsp3238V238MGtgAtg153153AY.1090.113166
ORF1ab/nsp3238V238LGtgTtg133133B.1.1770.001751
ORF1ab/nsp3238V238LGtgTtg120122AY.250.000722
ORF1ab/nsp3238V238LGtgCtg2122AY.250.000012
ORF1ab/nsp3238V238VgtGgtA104118P.10.001638
ORF1ab/nsp3238V238VgtGgtT14118P.10.000221
ORF1ab/nsp3238V238VgtGgtT116116AY.1190.004096
ORF1ab/nsp3238V238LGtgTtg108109B.10.000989
ORF1ab/nsp3238V238LGtgCtg1109B.10.000009
ORF1ab/nsp3238V238LGtgTtg8989P.1.170.014397
ORF1ab/nsp3238V238LGtgTtg8282AY.98.10.003971
ORF1ab/nsp3238V238MGtgAtg7575B.1.1.70.000067
ORF1ab/nsp3238V238LGtgTtg7474B.1.2580.004924
ORF1ab/nsp3238V238MGtgAtg7272AY.40.000112
ORF1ab/nsp3238V238VgtGgtA3671AY.250.000217
ORF1ab/nsp3238V238VgtGgtT3571AY.250.000211
ORF1ab/nsp3238V238LGtgTtg6464AY.940.028331
ORF1ab/nsp3238V238LGtgTtg6464B.1.177.180.074246
ORF1ab/nsp3238V238LGtgTtg6061AY.430.000266
ORF1ab/nsp3238V238LGtgCtg161AY.430.000004
ORF1ab/nsp3238V238LGtgTtg5657B.1.10.001016
ORF1ab/nsp3238V238LGtgCtg157B.1.10.000018
ORF1ab/nsp3238V238LGtgTtg4849B.1.4290.001129
ORF1ab/nsp3238V238LGtgCtg149B.1.4290.000024
ORF1ab/nsp3238V238AgTggCg4748All0.000009
ORF1ab/nsp3238V238AgTGgCA148All0
ORF1ab/nsp3238V238LGtgTtg4848AY.460.004996
ORF1ab/nsp3238V238VgtGgtT4647AY.440.00028
ORF1ab/nsp3238V238VgtGgtA147AY.440.000006
ORF1ab/nsp3238V238LGtgTtg4747AY.920.013502
ORF1ab/nsp3238V238VgtGgtA4646B.1.5640.019591
ORF1ab/nsp3238V238VgtGgtT4141AY.1000.001886
ORF1ab/nsp3238V238VgtGgtT4141AY.1210.005548
ORF1ab/nsp3238V238VgtGgtT4041AY.430.000177
ORF1ab/nsp3238V238VgtGgtA141AY.430.000004
ORF1ab/nsp3238V238MGtgAtg4141B.1.360.005982
ORF1ab/nsp3238V238LGtgTtg4141B.1.36.220.049517
ORF1ab/nsp3238V238LGtgTtg4040AY.420.001609
ORF1ab/nsp3238V238LGtgTtg3839AY.1200.001413
ORF1ab/nsp3238V238LGtgCtg139AY.1200.000037
ORF1ab/nsp3238V238LGtgTtg3737P.10.000583
ORF1ab/nsp3238V238LGtgTtg3236AY.30.000318
ORF1ab/nsp3238V238LGtgCtg436AY.30.00004
ORF1ab/nsp3238V238MGtgAtg3535AY.440.000213
ORF1ab/nsp3238V238LGtgTtg3333AY.4.50.003547
ORF1ab/nsp3238V238VgtGgtT2831AY.30.000278
ORF1ab/nsp3238V238VgtGgtA331AY.30.00003
ORF1ab/nsp3238V238LGtgTtg2930B.1.20.000255
ORF1ab/nsp3238V238LGtgCtg130B.1.20.000009
ORF1ab/nsp3238V238LGtgTtg3030N.50.053004
ORF1ab/nsp3238V238MGtgAtg2929AY.1000.001334
ORF1ab/nsp3238V238LGtgTtg2929B.1.2410.023539
ORF1ab/nsp3238V238LGtgTtg2727B.1.5950.007046
ORF1ab/nsp3238V238LGtgTtg2626B.1.1.630.010031
ORF1ab/nsp3238V238LGtgTtg2525AY.350.005826
ORF1ab/nsp3238V238delGTG---2424All0.000005
ORF1ab/nsp3238V238VgtGgtT1523AY.230.001046
ORF1ab/nsp3238V238VgtGgtA823AY.230.000558
ORF1ab/nsp3238V238LGtgTtg2323AY.470.000715
ORF1ab/nsp3238V238VgtGgtT2323B.1.36.220.027778
ORF1ab/nsp3238V238VgtGgtT2222AY.480.010233
ORF1ab/nsp3238V238MGtgAtg2222B.1.617.20.000083
ORF1ab/nsp3238V238LGtgTtg2121AY.200.000816
ORF1ab/nsp3238V238LGtgTtg2121AY.4.20.000455
ORF1ab/nsp3238V238VgtGgtT1521B.1.10.000272
ORF1ab/nsp3238V238VgtGgtA621B.1.10.000109
ORF1ab/nsp3238V238LGtgTtg2121B.1.2430.001461
ORF1ab/nsp3238V238LGtgTtg2020B.1.1.2030.338983
ORF1ab/nsp3238V238LGtgTtg1919AY.1060.006363
ORF1ab/nsp3238V238VgtGgtT1818AY.16.10.008459
ORF1ab/nsp3238V238LGtgTtg1717AY.1020.000451
ORF1ab/nsp3238V238MGtgAtg1717AY.430.000075
ORF1ab/nsp3238V238LGtgTtg1717B.1.1.5190.000675
ORF1ab/nsp3238V238LGtgTtg1717B.1.6210.001505
ORF1ab/nsp3238V238VgtGgtT1416AY.39.10.000555
ORF1ab/nsp3238V238VgtGgtA216AY.39.10.000079
ORF1ab/nsp3238V238LGtgTtg1616B.1.1.2410.033126
ORF1ab/nsp3238V238VgtGgtT1516B.1.1770.000198
ORF1ab/nsp3238V238VgtGgtC116B.1.1770.000013
ORF1ab/nsp3238V238VgtGgtT1415AY.1030.000087
ORF1ab/nsp3238V238VgtGgtC115AY.1030.000006
ORF1ab/nsp3238V238VgtGgtT815B.10.000073
ORF1ab/nsp3238V238VgtGgtA715B.10.000064
ORF1ab/nsp3238V238VgtGgtA1515B.1.36.240.092593
ORF1ab/nsp3238V238VgtGgtT1414B.1.177.810.002651
ORF1ab/nsp3238V238MGtgAtg1414B.1.5170.005978
ORF1ab/nsp3238V238LGtgTtg1414B.1.5260.000329
ORF1ab/nsp3238V238LGtgTtg1313B.1.3990.025145
ORF1ab/nsp3238V238VgtGgtT1012AY.1020.000265
ORF1ab/nsp3238V238VgtGgtA212AY.1020.000053
ORF1ab/nsp3238V238LGtgTtg1212AY.390.000297
ORF1ab/nsp3238V238VgtGgtT1212AY.980.000948
ORF1ab/nsp3238V238LGtgTtg1212B.1.4270.000606
ORF1ab/nsp3238V238LGtgTtg1111AY.50.000227
ORF1ab/nsp3238V238VgtGgtT1111AY.7.20.006152
ORF1ab/nsp3238V238LGtgTtg1111AY.740.001272
ORF1ab/nsp3238V238VgtGgtT1111B.1.2400.002371
ORF1ab/nsp3238V238VgtGgtT1010AY.1170.000845
ORF1ab/nsp3238V238VgtGgtT610AY.470.000187
ORF1ab/nsp3238V238VgtGgtA410AY.470.000124
ORF1ab/nsp3238V238LGtgTtg1010AY.750.00056
ORF1ab/nsp3238V238MGtgAtg99AY.1030.000056
ORF1ab/nsp3238V238VgtGgtT99AY.1180.000564
ORF1ab/nsp3238V238LGtgTtg99AY.1190.000318
ORF1ab/nsp3238V238VgtGgtT99AY.160.003417
ORF1ab/nsp3238V238AgTggCg99AY.430.00004
ORF1ab/nsp3238V238MGtgAtg99B.1.1.3020.018672
ORF1ab/nsp3238V238LGtgTtg99B.1.1.5260.031915
ORF1ab/nsp3238V238VgtGgtA59B.1.20.000044
ORF1ab/nsp3238V238VgtGgtT49B.1.20.000035
ORF1ab/nsp3238V238LGtgTtg99B.1.3510.000268
ORF1ab/nsp3238V238LGtgTtg88AY.330.000534
ORF1ab/nsp3238V238LGtgTtg88AY.730.005323
ORF1ab/nsp3238V238VgtGgtT88B.1.1.5250.043716
ORF1ab/nsp3238V238AgTggCg88B.1.1.70.000007
ORF1ab/nsp3238V238LGtgTtg88B.1.1600.00025
ORF1ab/nsp3238V238LGtgTtg88B.1.2210.000568
ORF1ab/nsp3238V238LGtgTtg88B.1.2600.026756
ORF1ab/nsp3238V238MGtgAtg88B.1.3510.000238
ORF1ab/nsp3238V238MGtgAtg88B.1.5260.000188
ORF1ab/nsp3238V238LGtgTtg77AY.1000.000322
ORF1ab/nsp3238V238LGtgTtg77AY.260.000198
ORF1ab/nsp3238V238VgtGgtT77AY.530.002013
ORF1ab/nsp3238V238AgTggCg77AY.650.003731
ORF1ab/nsp3238V238MGtgAtg77B.1.1.5190.000278
ORF1ab/nsp3238V238LGtgCtg77B.1.177.240.009067
ORF1ab/nsp3238V238MGtgAtg77B.1.20.000062
ORF1ab/nsp3238V238VgtGgtT47B.1.2430.000278
ORF1ab/nsp3238V238VgtGgtA37B.1.2430.000209
ORF1ab/nsp3238V238LGtgTtg77C.370.000812
ORF1ab/nsp3238V238VgtGgtT77C.370.000812
ORF1ab/nsp3238V238LGtgTtg77P.1.140.000335
ORF1ab/nsp3238V238LGtgTtg77P.1.70.002235
ORF1ab/nsp3238V238del1gtGgt-36All0.000001
ORF1ab/nsp3238V238del1gTgg-g26All0
ORF1ab/nsp3238V238del1Gtg-tg16All0
ORF1ab/nsp3238V238VgtGgtT66B.1.177.550.013986
ORF1ab/nsp3238V238VgtGgtT66B.1.2580.000399
ORF1ab/nsp3238V238VgtGgtA36B.1.3510.000089
ORF1ab/nsp3238V238VgtGgtT36B.1.3510.000089
ORF1ab/nsp3238V238LGtgTtg66B.1.4680.034286
ORF1ab/nsp3238V238VgtGgtT66P.20.00112
ORF1ab/nsp3238V238LGtgTtg55A.23.10.003521
ORF1ab/nsp3238V238GgTggGg45All0.000001
ORF1ab/nsp3238V238GgTGgGT15All0
ORF1ab/nsp3238V238VgtGgtT55AY.1080.005513
ORF1ab/nsp3238V238LGtgTtg55AY.230.000349
ORF1ab/nsp3238V238MGtgAtg55AY.250.00003
ORF1ab/nsp3238V238MGtgAtg55AY.30.00005
ORF1ab/nsp3238V238LGtgTtg55AY.450.000608
ORF1ab/nsp3238V238VgtGgtT55AY.610.000524
ORF1ab/nsp3238V238VgtGgtT55AY.90.000338
ORF1ab/nsp3238V238LGtgTtg55B.1.1.2160.004452
ORF1ab/nsp3238V238VgtGgtA55B.1.177.160.003322
ORF1ab/nsp3238V238AgTggCg55B.1.617.20.000019
ORF1ab/nsp3238V238LGtgTtg44AY.1210.000541
ORF1ab/nsp3238V238LGtgTtg44AY.160.001519
ORF1ab/nsp3238V238LGtgTtg44AY.20.001425
ORF1ab/nsp3238V238AgTggCg44AY.260.000113
ORF1ab/nsp3238V238LGtgTtg44AY.270.000259
ORF1ab/nsp3238V238VgtGgtA24AY.270.000129
ORF1ab/nsp3238V238VgtGgtT24AY.270.000129
ORF1ab/nsp3238V238VgtGgtT44AY.450.000487
ORF1ab/nsp3238V238VgtGgtT44AY.460.000416
ORF1ab/nsp3238V238LGtgTtg44AY.60.000165
ORF1ab/nsp3238V238VgtGgtT44AY.9.20.000147
ORF1ab/nsp3238V238VgtGgtT44B0.000511
ORF1ab/nsp3238V238LGtgCtg24B0.000256
ORF1ab/nsp3238V238LGtgTtg24B0.000256
ORF1ab/nsp3238V238delGTG---44B.10.000037
ORF1ab/nsp3238V238LGtgTtg44B.1.2360.008214
ORF1ab/nsp3238V238VgtGgtT44B.1.3490.002859
ORF1ab/nsp3238V238LGtgTtg44B.1.36.10.004561
ORF1ab/nsp3238V238LGtgTtg44B.1.36.160.005698
ORF1ab/nsp3238V238VgtGgtT44B.1.4290.000094
ORF1ab/nsp3238V238LGtgTtg44B.1.4560.013072
ORF1ab/nsp3238V238MGtgAtg44B.1.5610.001588
ORF1ab/nsp3238V238VgtGgtT44B.1.617.10.000516
ORF1ab/nsp3238V238LGtgTtg44B.1.617.10.000516
ORF1ab/nsp3238V238LGtgTtg44Q.80.00066
ORF1ab/nsp3238V238LGtgTtg23AY.140.000176
ORF1ab/nsp3238V238LGtgCtg13AY.140.000088
ORF1ab/nsp3238V238LGtgTtg33AY.16.10.00141
ORF1ab/nsp3238V238VgtGgtT33AY.200.000117
ORF1ab/nsp3238V238LGtgTtg33AY.290.000047
ORF1ab/nsp3238V238LGtgTtg33AY.3.10.000256
ORF1ab/nsp3238V238LGtgTtg33AY.300.001187
ORF1ab/nsp3238V238LGtgTtg33AY.340.000291
ORF1ab/nsp3238V238LGtgTtg33AY.39.10.000119
ORF1ab/nsp3238V238VgtGgtT23AY.4.20.000043
ORF1ab/nsp3238V238VgtGgtA13AY.4.20.000022
ORF1ab/nsp3238V238MGtgAtg33AY.460.000312
ORF1ab/nsp3238V238LGtgTtg33AY.46.20.001906
ORF1ab/nsp3238V238LGtgTtg33AY.46.60.000217
ORF1ab/nsp3238V238VgtGgtT33AY.5.30.001012
ORF1ab/nsp3238V238VgtGgtT33AY.680.000821
ORF1ab/nsp3238V238VgtGgtA33AY.720.004082
ORF1ab/nsp3238V238LGtgTtg33AY.90.000203
ORF1ab/nsp3238V238MGtgAtg33B.10.000027
ORF1ab/nsp3238V238LGtgTtg33B.1.1.280.000934
ORF1ab/nsp3238V238delGTG---33B.1.1.330.001263
ORF1ab/nsp3238V238VgtGgtT33B.1.1.390.001529
ORF1ab/nsp3238V238VgtGgtT33B.1.1.4340.001046
ORF1ab/nsp3238V238LGtgTtg33B.1.1.500.002037
ORF1ab/nsp3238V238LGtgTtg33B.1.177.650.001996
ORF1ab/nsp3238V238LGtgCtg33B.1.3110.000824
ORF1ab/nsp3238V238LGtgTtg33B.1.36.170.001482
ORF1ab/nsp3238V238LGtgTtg33B.1.36.380.004926
ORF1ab/nsp3238V238LGtgTtg33B.1.3610.003866
ORF1ab/nsp3238V238LGtgTtg33B.1.3960.002117
ORF1ab/nsp3238V238LGtgTtg33B.1.5250.000339
ORF1ab/nsp3238V238VgtGgtA33B.1.5260.000071
ORF1ab/nsp3238V238VgtGgtT23B.1.5960.000174
ORF1ab/nsp3238V238VgtGgtA13B.1.5960.000087
ORF1ab/nsp3238V238LGtgTtg33B.1.619.10.001924
ORF1ab/nsp3238V238VgtGgtT33B.1.6210.000266
ORF1ab/nsp3238V238LGtgTtg33B.1.6330.125
ORF1ab/nsp3238V238VgtGgtT33B.1.6370.000219
ORF1ab/nsp3238V238LGtgTtg33Q.10.000379
ORF1ab/nsp3238V238VgtGgtA12A0.000387
ORF1ab/nsp3238V238VgtGgtT12A0.000387
ORF1ab/nsp3238V238VgtGgtT22AY.1100.000225
ORF1ab/nsp3238V238LGtgTtg22AY.1110.000366
ORF1ab/nsp3238V238LGtgTtg22AY.1170.000169
ORF1ab/nsp3238V238MGtgAtg22AY.120.10.000642
ORF1ab/nsp3238V238MGtgAtg22AY.130.000322
ORF1ab/nsp3238V238LGtgTtg22AY.190.002281
ORF1ab/nsp3238V238VgtGgtT22AY.190.002281
ORF1ab/nsp3238V238MGtgAtg22AY.200.000078
ORF1ab/nsp3238V238VgtGgtA12AY.290.000016
ORF1ab/nsp3238V238VgtGgtT12AY.290.000016
ORF1ab/nsp3238V238LGtgTtg22AY.370.000632
ORF1ab/nsp3238V238VgtGgtT22AY.39.1.10.001449
ORF1ab/nsp3238V238AgTGgCA12AY.40.000002
ORF1ab/nsp3238V238AgTggCg12AY.40.000002
ORF1ab/nsp3238V238VgtGgtT22AY.4.50.000215
ORF1ab/nsp3238V238VgtGgtT22AY.420.00008
ORF1ab/nsp3238V238VgtGgtT22AY.50.000041
ORF1ab/nsp3238V238LGtgTtg22AY.610.00021
ORF1ab/nsp3238V238VgtGgtT22AY.660.002139
ORF1ab/nsp3238V238LGtgTtg22AY.680.000547
ORF1ab/nsp3238V238VgtGgtT22AY.750.000112
ORF1ab/nsp3238V238LGtgTtg22AY.75.10.000361
ORF1ab/nsp3238V238VgtGgtT22AY.770.002255
ORF1ab/nsp3238V238LGtgTtg22AY.80.001212
ORF1ab/nsp3238V238VgtGgtT22AY.840.000875
ORF1ab/nsp3238V238LGtgTtg22AY.9.20.000073
ORF1ab/nsp3238V238LGtgTtg22AY.980.000158
ORF1ab/nsp3238V238GgTGgGT12B.10.000009
ORF1ab/nsp3238V238GgTggGg12B.10.000009
ORF1ab/nsp3238V238MGtgAtg22B.1.10.000036
ORF1ab/nsp3238V238delGTG---22B.1.10.000036
ORF1ab/nsp3238V238VgtGgtT22B.1.1.10.000653
ORF1ab/nsp3238V238LGtgTtg22B.1.1.1100.181818
ORF1ab/nsp3238V238LGtgTtg22B.1.1.2200.003717
ORF1ab/nsp3238V238LGtgTtg22B.1.1.2220.000408
ORF1ab/nsp3238V238MGtgAtg22B.1.1.280.000622
ORF1ab/nsp3238V238VgtGgtA22B.1.1.330.000842
ORF1ab/nsp3238V238LGtgTtg22B.1.1.3480.001592
ORF1ab/nsp3238V238delGTG---22B.1.1.3480.001592
ORF1ab/nsp3238V238LGtgTtg22B.1.1.390.001019
ORF1ab/nsp3238V238AgTggCg22B.1.1.3980.006452
ORF1ab/nsp3238V238LGtgTtg22B.1.1.4160.00181
ORF1ab/nsp3238V238LGtgTtg22B.1.1.4340.000697
ORF1ab/nsp3238V238VgtGgtT22B.1.1.4640.002946
ORF1ab/nsp3238V238LGtgTtg22B.1.1.890.012121
ORF1ab/nsp3238V238LGtgTtg22B.1.1110.00235
ORF1ab/nsp3238V238LGtgTtg22B.1.1390.001466
ORF1ab/nsp3238V238LGtgTtg22B.1.1470.001512
ORF1ab/nsp3238V238VgtGgtT12B.1.1600.000031
ORF1ab/nsp3238V238VgtGgtA12B.1.1600.000031
ORF1ab/nsp3238V238LGtgTtg22B.1.177.210.000153
ORF1ab/nsp3238V238LGtgTtg22B.1.177.320.002699
ORF1ab/nsp3238V238LGtgTtg22B.1.177.750.002081
ORF1ab/nsp3238V238LGtgTtg22B.1.2010.011364
ORF1ab/nsp3238V238VgtGgtT22B.1.2180.010309
ORF1ab/nsp3238V238VgtGgtA22B.1.258.30.00335
ORF1ab/nsp3238V238VgtGgtT22B.1.3110.000549
ORF1ab/nsp3238V238LGtgTtg22B.1.3200.002491
ORF1ab/nsp3238V238LGtgTtg22B.1.36.290.001035
ORF1ab/nsp3238V238LGtgTtg22B.1.36.80.002
ORF1ab/nsp3238V238LGtgTtg22B.1.3750.001639
ORF1ab/nsp3238V238LGtgTtg22B.1.3830.018018
ORF1ab/nsp3238V238VgtGgtT22B.1.4270.000101
ORF1ab/nsp3238V238LGtgTtg22B.1.4450.023529
ORF1ab/nsp3238V238LGtgTtg22B.1.4620.014493
ORF1ab/nsp3238V238LGtgTtg22B.1.466.10.014388
ORF1ab/nsp3238V238LGtgTtg22B.1.4990.002101
ORF1ab/nsp3238V238LGtgTtg22B.1.5090.001732
ORF1ab/nsp3238V238LGtgTtg22B.1.6230.001073
ORF1ab/nsp3238V238VgtGgtT22C.220.142857
ORF1ab/nsp3238V238LGtgTtg22C.360.001821
ORF1ab/nsp3238V238LGtgTtg22C.36.30.001134
ORF1ab/nsp3238V238MGtgAtg22C.370.000232
ORF1ab/nsp3238V238LGtgTtg22D.20.00015
ORF1ab/nsp3238V238delGTG---22N.60.014184
ORF1ab/nsp3238V238VgtGgtT22P.1.100.000539
ORF1ab/nsp3238V238LGtgTtg22P.1.150.000465
ORF1ab/nsp3238V238MGtgAtg22P.1.150.000465
ORF1ab/nsp3238V238VgtGgtT22P.1.90.009615
ORF1ab/nsp3238V238LGtgTtg22Q.40.00091
ORF1ab/nsp3238V238LGtgTtg11A.2.20.001689
ORF1ab/nsp3238V238LGtgTtg11A.2.30.004739
ORF1ab/nsp3238V238LGtgTtg11A.2.50.000499
ORF1ab/nsp3238V238LGtgTtg11A.2.5.30.010309
ORF1ab/nsp3238V238VgtGgtA11A.23.10.000704
ORF1ab/nsp3238V238EgTggAg11All0
ORF1ab/nsp3238V238KGTGAAA11All0
ORF1ab/nsp3238V238TGTGACC11All0
ORF1ab/nsp3238V238LGtgTtg11AU.20.002421
ORF1ab/nsp3238V238delGTG---11AY.1000.000046
ORF1ab/nsp3238V238GgTggGg11AY.1020.000027
ORF1ab/nsp3238V238MGtgAtg11AY.1020.000027
ORF1ab/nsp3238V238AgTggCg11AY.1030.000006
ORF1ab/nsp3238V238LGtgTtg11AY.1050.000643
ORF1ab/nsp3238V238LGtgTtg11AY.1080.001103
ORF1ab/nsp3238V238VgtGgtT11AY.1090.00074
ORF1ab/nsp3238V238LGtgTtg11AY.1090.00074
ORF1ab/nsp3238V238delGTG---11AY.110.001339
ORF1ab/nsp3238V238LGtgTtg11AY.1100.000113
ORF1ab/nsp3238V238VgtGgtT11AY.1160.000287
ORF1ab/nsp3238V238LGtgTtg11AY.1180.000063
ORF1ab/nsp3238V238MGtgAtg11AY.1180.000063
ORF1ab/nsp3238V238VgtGgtT11AY.120.000316
ORF1ab/nsp3238V238delGTG---11AY.1200.000037
ORF1ab/nsp3238V238MGtgAtg11AY.1200.000037
ORF1ab/nsp3238V238VgtGgtT11AY.1200.000037
ORF1ab/nsp3238V238AgTggCg11AY.120.10.000321
ORF1ab/nsp3238V238VgtGgtA11AY.120.10.000321
ORF1ab/nsp3238V238LGtgTtg11AY.120.2.10.000498
ORF1ab/nsp3238V238LGtgTtg11AY.130.000161
ORF1ab/nsp3238V238LGtgTtg11AY.210.001898
ORF1ab/nsp3238V238AgTggCg11AY.230.00007
ORF1ab/nsp3238V238MGtgAtg11AY.230.00007
ORF1ab/nsp3238V238LGtgTtg11AY.23.10.000417
ORF1ab/nsp3238V238VgtGgtT11AY.260.000028
ORF1ab/nsp3238V238MGtgAtg11AY.290.000016
ORF1ab/nsp3238V238del1gtGgt-11AY.30.00001
ORF1ab/nsp3238V238AgTggCg11AY.30.00001
ORF1ab/nsp3238V238VgtGgtC11AY.300.000396
ORF1ab/nsp3238V238LGtgTtg11AY.320.000532
ORF1ab/nsp3238V238VgtGgtT11AY.330.000067
ORF1ab/nsp3238V238VgtGgtT11AY.340.000097
ORF1ab/nsp3238V238VgtGgtT11AY.360.000148
ORF1ab/nsp3238V238delGTG---11AY.390.000025
ORF1ab/nsp3238V238MGtgAtg11AY.390.000025
ORF1ab/nsp3238V238GgTggGg11AY.40.000002
ORF1ab/nsp3238V238VgtGgtT11AY.4.40.000409
ORF1ab/nsp3238V238KGTGAAA11AY.440.000006
ORF1ab/nsp3238V238del1gTgg-g11AY.440.000006
ORF1ab/nsp3238V238AgTggCg11AY.440.000006
ORF1ab/nsp3238V238LGtgTtg11AY.46.40.000165
ORF1ab/nsp3238V238LGtgTtg11AY.46.50.000198
ORF1ab/nsp3238V238VgtGgtT11AY.46.50.000198
ORF1ab/nsp3238V238VgtGgtT11AY.46.60.000072
ORF1ab/nsp3238V238AgTggCg11AY.470.000031
ORF1ab/nsp3238V238MGtgAtg11AY.50.000021
ORF1ab/nsp3238V238LGtgTtg11AY.5.40.000277
ORF1ab/nsp3238V238MGtgAtg11AY.5.40.000277
ORF1ab/nsp3238V238VgtGgtT11AY.560.001605
ORF1ab/nsp3238V238LGtgTtg11AY.570.000656
ORF1ab/nsp3238V238VgtGgtT11AY.570.000656
ORF1ab/nsp3238V238LGtgTtg11AY.590.00053
ORF1ab/nsp3238V238VgtGgtT11AY.60.000041
ORF1ab/nsp3238V238LGtgTtg11AY.600.000938
ORF1ab/nsp3238V238VgtGgtT11AY.670.000464
ORF1ab/nsp3238V238AgTggCg11AY.670.000464
ORF1ab/nsp3238V238LGtgTtg11AY.670.000464
ORF1ab/nsp3238V238LGtgTtg11AY.700.000209
ORF1ab/nsp3238V238VgtGgtT11AY.740.000116
ORF1ab/nsp3238V238LGtgTtg11AY.840.000437
ORF1ab/nsp3238V238LGtgTtg11AY.850.000427
ORF1ab/nsp3238V238LGtgTtg11AY.860.00083
ORF1ab/nsp3238V238LGtgTtg11AY.890.004902
ORF1ab/nsp3238V238TGTGACC11AY.90.000068
ORF1ab/nsp3238V238LGtgTtg11AY.910.00073
ORF1ab/nsp3238V238VgtGgtT11AY.920.000287
ORF1ab/nsp3238V238VgtGgtT11AY.930.000273
ORF1ab/nsp3238V238VgtGgtT11AY.960.002075
ORF1ab/nsp3238V238del1gtGgt-11AY.980.000079
ORF1ab/nsp3238V238VgtGgtT11AY.98.10.000048
ORF1ab/nsp3238V238VgtGgtA11AY.990.001049
ORF1ab/nsp3238V238LGtgTtg11AY.99.20.000092
ORF1ab/nsp3238V238MGtgAtg11B0.000128
ORF1ab/nsp3238V238AgTggCg11B.1.10.000018
ORF1ab/nsp3238V238LGtgTtg11B.1.1.10.000327
ORF1ab/nsp3238V238LGtgTtg11B.1.1.1390.022727
ORF1ab/nsp3238V238VgtGgtT11B.1.1.1570.000913
ORF1ab/nsp3238V238LGtgTtg11B.1.1.1890.001513
ORF1ab/nsp3238V238LGtgTtg11B.1.1.1940.00495
ORF1ab/nsp3238V238MGtgAtg11B.1.1.2140.000055
ORF1ab/nsp3238V238VgtGgtA11B.1.1.2140.000055
ORF1ab/nsp3238V238LGtgTtg11B.1.1.2140.000055
ORF1ab/nsp3238V238delGTG---11B.1.1.2220.000204
ORF1ab/nsp3238V238LGtgTtg11B.1.1.250.000569
ORF1ab/nsp3238V238MGtgAtg11B.1.1.2840.000107
ORF1ab/nsp3238V238LGtgTtg11B.1.1.2910.000742
ORF1ab/nsp3238V238VgtGgtA11B.1.1.3040.002809
ORF1ab/nsp3238V238LGtgTtg11B.1.1.3060.000438
ORF1ab/nsp3238V238LGtgTtg11B.1.1.3180.000302
ORF1ab/nsp3238V238LGtgTtg11B.1.1.3260.001761
ORF1ab/nsp3238V238LGtgTtg11B.1.1.330.000421
ORF1ab/nsp3238V238LGtgTtg11B.1.1.3440.010753
ORF1ab/nsp3238V238VgtGgtA11B.1.1.3480.000796
ORF1ab/nsp3238V238LGtgTtg11B.1.1.370.000193
ORF1ab/nsp3238V238VgtGgtT11B.1.1.3720.000689
ORF1ab/nsp3238V238VgtGgtA11B.1.1.700.000341
ORF1ab/nsp3238V238LGtgTtg11B.1.1260.001276
ORF1ab/nsp3238V238LGtgTtg11B.1.1640.014925
ORF1ab/nsp3238V238LGtgTtg11B.1.1700.00431
ORF1ab/nsp3238V238MGtgAtg11B.1.1770.000013
ORF1ab/nsp3238V238LGtgTtg11B.1.177.160.000664
ORF1ab/nsp3238V238LGtgTtg11B.1.177.190.001431
ORF1ab/nsp3238V238LGtgTtg11B.1.177.310.011494
ORF1ab/nsp3238V238LGtgTtg11B.1.177.40.000211
ORF1ab/nsp3238V238VgtGgtT11B.1.177.530.002392
ORF1ab/nsp3238V238LGtgTtg11B.1.177.720.00339
ORF1ab/nsp3238V238MGtgAtg11B.1.177.820.000477
ORF1ab/nsp3238V238LGtgTtg11B.1.177.860.000183
ORF1ab/nsp3238V238LGtgTtg11B.1.177.90.001332
ORF1ab/nsp3238V238EgTggAg11B.1.20.000009
ORF1ab/nsp3238V238AgTggCg11B.1.20.000009
ORF1ab/nsp3238V238del1gTgg-g11B.1.20.000009
ORF1ab/nsp3238V238VgtGgtT11B.1.2010.005682
ORF1ab/nsp3238V238LGtgTtg11B.1.2150.009615
ORF1ab/nsp3238V238VgtGgtA11B.1.2210.000071
ORF1ab/nsp3238V238LGtgTtg11B.1.2330.014085
ORF1ab/nsp3238V238LGtgTtg11B.1.2340.000132
ORF1ab/nsp3238V238LGtgTtg11B.1.258.110.000396
ORF1ab/nsp3238V238LGtgTtg11B.1.258.140.00098
ORF1ab/nsp3238V238del1gtGgt-11B.1.258.170.000104
ORF1ab/nsp3238V238VgtGgtT11B.1.258.170.000104
ORF1ab/nsp3238V238VgtGgtT11B.1.2600.003344
ORF1ab/nsp3238V238VgtGgtT11B.1.2650.001271
ORF1ab/nsp3238V238LGtgTtg11B.1.2790.000514
ORF1ab/nsp3238V238LGtgTtg11B.1.30.002618
ORF1ab/nsp3238V238AgTggCg11B.1.3510.00003
ORF1ab/nsp3238V238VgtGgtT11B.1.351.30.000876
ORF1ab/nsp3238V238LGtgTtg11B.1.3560.001727
ORF1ab/nsp3238V238VgtGgtA11B.1.360.000146
ORF1ab/nsp3238V238del1Gtg-tg11B.1.360.000146
ORF1ab/nsp3238V238LGtgTtg11B.1.36.100.004785
ORF1ab/nsp3238V238VgtGgtA11B.1.36.100.004785
ORF1ab/nsp3238V238GgTggGg11B.1.36.170.000494
ORF1ab/nsp3238V238LGtgTtg11B.1.36.330.007576
ORF1ab/nsp3238V238LGtgTtg11B.1.36.340.021277
ORF1ab/nsp3238V238LGtgTtg11B.1.36.390.002217
ORF1ab/nsp3238V238LGtgTtg11B.1.36.70.004
ORF1ab/nsp3238V238MGtgAtg11B.1.3600.012658
ORF1ab/nsp3238V238LGtgTtg11B.1.3670.000792
ORF1ab/nsp3238V238VgtGgtT11B.1.3670.000792
ORF1ab/nsp3238V238VgtGgtT11B.1.3690.000285
ORF1ab/nsp3238V238LGtgTtg11B.1.3690.000285
ORF1ab/nsp3238V238LGtgTtg11B.1.3970.004854
ORF1ab/nsp3238V238LGtgTtg11B.1.3980.002976
ORF1ab/nsp3238V238LGtgTtg11B.1.4000.000429
ORF1ab/nsp3238V238LGtgTtg11B.1.4160.001269
ORF1ab/nsp3238V238LGtgTtg11B.1.416.10.001563
ORF1ab/nsp3238V238VgtGgtT11B.1.4280.00102
ORF1ab/nsp3238V238delGTG---11B.1.4290.000024
ORF1ab/nsp3238V238LGtgTtg11B.1.4330.003195
ORF1ab/nsp3238V238LGtgTtg11B.1.5230.002451
ORF1ab/nsp3238V238LGtgTtg11B.1.5330.009615
ORF1ab/nsp3238V238LGtgTtg11B.1.5400.009709
ORF1ab/nsp3238V238VgtGgtT11B.1.5510.00129
ORF1ab/nsp3238V238MGtgAtg11B.1.5750.000303
ORF1ab/nsp3238V238VgtGgtA11B.1.575.10.002439
ORF1ab/nsp3238V238LGtgTtg11B.1.5850.027778
ORF1ab/nsp3238V238LGtgTtg11B.1.5900.004545
ORF1ab/nsp3238V238LGtgTtg11B.1.5960.000087
ORF1ab/nsp3238V238MGtgAtg11B.1.5960.000087
ORF1ab/nsp3238V238AgTggCg11B.1.5960.000087
ORF1ab/nsp3238V238MGtgAtg11B.1.596.10.009346
ORF1ab/nsp3238V238LGtgTtg11B.1.6010.030303
ORF1ab/nsp3238V238LGtgCtg11B.1.6090.000479
ORF1ab/nsp3238V238VgtGgtT11B.1.6090.000479
ORF1ab/nsp3238V238LGtgTtg11B.1.6280.000352
ORF1ab/nsp3238V238delGTG---11B.1.6300.005236
ORF1ab/nsp3238V238LGtgTtg11B.1.6320.006711
ORF1ab/nsp3238V238LGtgTtg11B.1.780.008547
ORF1ab/nsp3238V238LGtgTtg11B.460.020833
ORF1ab/nsp3238V238LGtgTtg11C.170.055556
ORF1ab/nsp3238V238delGTG---11C.170.055556
ORF1ab/nsp3238V238LGtgTtg11C.37.10.002618
ORF1ab/nsp3238V238MGtgAtg11D.20.000075
ORF1ab/nsp3238V238LGtgTtg11N.40.004255
ORF1ab/nsp3238V238LGtgTtg11N.90.005952
ORF1ab/nsp3238V238MGtgAtg11P.10.000016
ORF1ab/nsp3238V238delGTG---11P.10.000016
ORF1ab/nsp3238V238VgtGgtA11P.1.120.000484
ORF1ab/nsp3238V238delGTG---11P.1.150.000232
ORF1ab/nsp3238V238VgtGgtA11P.1.160.000374
ORF1ab/nsp3238V238LGtgTtg11P.1.60.001946
ORF1ab/nsp3238V238LGtgTtg11P.70.004367
ORF1ab/nsp3238V238delGTG---11R.10.00009
ORF1ab/nsp3238V238LGtgTtg11W.40.001351
ORF1ab/nsp3238V238VgtGgtT11Z.10.00289