CoV-GLUEGenomeCountriesLineagesMutationsInsertionsDeletionsUpdated:

CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF1ab/nsp3 : CodonNum = 237

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF1ab/nsp3237T237AT1055AnonsynAcaGca13927139260.9999283428-3430
ORF1ab/nsp3237T237AT1055AnonsynAcAGcT1392710.0000718033428-3430
ORF1ab/nsp3237T237IT1055InonsynaCaaTa3248324813428-3430
ORF1ab/nsp3237T237TT1055TsynacAacG4613580.7765733428-3430
ORF1ab/nsp3237T237TT1055TsynacAacC461650.1409983428-3430
ORF1ab/nsp3237T237TT1055TsynacAacT461380.08242953428-3430
ORF1ab/nsp3237T237KT1055KnonsynaCaaAa17917913428-3430
ORF1ab/nsp3237T237PT1055PnonsynAcaCca585813428-3430
ORF1ab/nsp3237T237VT1055VnonsynACaGTa313113428-3430
ORF1ab/nsp3237T237delT1055deldelACA---282813428-3430
ORF1ab/nsp3237T237RT1055RnonsynaCaaGa9913428-3430
ORF1ab/nsp3237T237ST1055SnonsynAcaTca8813428-3430
ORF1ab/nsp3237T237del1T1055del1delacAac-320.6666673428-3430
ORF1ab/nsp3237T237del1T1055del1delaCAaT-310.3333333428-3430
ORF1ab/nsp3237T237NT1055NnonsynaCAaAT1113428-3430

Details of the mutation no within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF1ab/nsp3237T237AAcaGca1392613927All0.002664
ORF1ab/nsp3237T237AAcAGcT113927All0
ORF1ab/nsp3237T237AAcaGca1119011191B.1.6210.990528
ORF1ab/nsp3237T237AAcAGcT111191B.1.6210.000089
ORF1ab/nsp3237T237IaCaaTa32483248All0.000621
ORF1ab/nsp3237T237AAcaGca19631963B.1.621.10.992919
ORF1ab/nsp3237T237IaCaaTa675675B.1.1.70.000604
ORF1ab/nsp3237T237TacAacG358461All0.000068
ORF1ab/nsp3237T237TacAacC65461All0.000012
ORF1ab/nsp3237T237TacAacT38461All0.000007
ORF1ab/nsp3237T237IaCaaTa317317AY.430.001404
ORF1ab/nsp3237T237IaCaaTa278278AY.40.000433
ORF1ab/nsp3237T237IaCaaTa240240AY.440.001461
ORF1ab/nsp3237T237IaCaaTa228228B.1.617.20.000859
ORF1ab/nsp3237T237IaCaaTa201201D.51
ORF1ab/nsp3237T237TacAacG182187AY.40.000283
ORF1ab/nsp3237T237TacAacT5187AY.40.000008
ORF1ab/nsp3237T237KaCaaAa179179All0.000034
ORF1ab/nsp3237T237AAcaGca152152B.10.001392
ORF1ab/nsp3237T237KaCaaAa147147AY.260.004162
ORF1ab/nsp3237T237IaCaaTa140140AY.30.001392
ORF1ab/nsp3237T237IaCaaTa115115B.1.2580.007653
ORF1ab/nsp3237T237IaCaaTa109109AY.1000.005015
ORF1ab/nsp3237T237AAcaGca8383B.1.1.70.000074
ORF1ab/nsp3237T237AAcaGca7272AY.9.20.002645
ORF1ab/nsp3237T237AAcaGca7272B.1.5610.028583
ORF1ab/nsp3237T237TacAacG5960AY.390.001458
ORF1ab/nsp3237T237TacAacC160AY.390.000025
ORF1ab/nsp3237T237PAcaCca5858All0.000011
ORF1ab/nsp3237T237TacAacC5358AY.290.000836
ORF1ab/nsp3237T237TacAacG558AY.290.000079
ORF1ab/nsp3237T237AAcaGca5454B.1.1600.001684
ORF1ab/nsp3237T237IaCaaTa5252B.1.3510.001546
ORF1ab/nsp3237T237AAcaGca5151AY.40.000079
ORF1ab/nsp3237T237IaCaaTa4646B.1.10.000834
ORF1ab/nsp3237T237AAcaGca4141AY.1180.002569
ORF1ab/nsp3237T237IaCaaTa4040B.1.1770.000527
ORF1ab/nsp3237T237IaCaaTa3939B.1.20.000343
ORF1ab/nsp3237T237IaCaaTa3434AY.1030.000211
ORF1ab/nsp3237T237IaCaaTa3434B.10.000311
ORF1ab/nsp3237T237PAcaCca3434B.1.1.70.00003
ORF1ab/nsp3237T237IaCaaTa3434C.370.003946
ORF1ab/nsp3237T237IaCaaTa3333AY.250.000198
ORF1ab/nsp3237T237AAcaGca3333B.1.6230.017704
ORF1ab/nsp3237T237VACaGTa3131All0.000006
ORF1ab/nsp3237T237IaCaaTa3030AY.260.000849
ORF1ab/nsp3237T237delACA---2828All0.000005
ORF1ab/nsp3237T237VACaGTa2727B.1.6210.00239
ORF1ab/nsp3237T237IaCaaTa2424AY.420.000966
ORF1ab/nsp3237T237IaCaaTa2424P.10.000378
ORF1ab/nsp3237T237AAcaGca2121B.1.617.20.000079
ORF1ab/nsp3237T237TacAacG2021B.1.617.20.000075
ORF1ab/nsp3237T237TacAacT121B.1.617.20.000004
ORF1ab/nsp3237T237IaCaaTa1919B.1.1.5190.000755
ORF1ab/nsp3237T237IaCaaTa1818AY.200.0007
ORF1ab/nsp3237T237AAcaGca1818AY.390.000445
ORF1ab/nsp3237T237IaCaaTa1818B.1.4290.000424
ORF1ab/nsp3237T237AAcaGca1616AY.30.000159
ORF1ab/nsp3237T237IaCaaTa1616AY.330.001068
ORF1ab/nsp3237T237IaCaaTa1616C.1.20.068085
ORF1ab/nsp3237T237IaCaaTa1515AY.290.000237
ORF1ab/nsp3237T237IaCaaTa1515AY.980.001185
ORF1ab/nsp3237T237TacAacT1115B.1.1770.000145
ORF1ab/nsp3237T237TacAacG415B.1.1770.000053
ORF1ab/nsp3237T237KaCaaAa1414AY.230.000976
ORF1ab/nsp3237T237IaCaaTa1414AY.50.000289
ORF1ab/nsp3237T237AAcaGca1414B.1.20.000123
ORF1ab/nsp3237T237IaCaaTa1414B.1.2340.001847
ORF1ab/nsp3237T237TacAacG1313AY.430.000058
ORF1ab/nsp3237T237AAcaGca1212B0.001534
ORF1ab/nsp3237T237IaCaaTa1212B.1.4270.000606
ORF1ab/nsp3237T237TacAacG1111B.1.1.70.00001
ORF1ab/nsp3237T237TacAacG511B.1.20.000044
ORF1ab/nsp3237T237TacAacC511B.1.20.000044
ORF1ab/nsp3237T237TacAacT111B.1.20.000009
ORF1ab/nsp3237T237IaCaaTa1010AY.46.20.006353
ORF1ab/nsp3237T237AAcaGca1010B.1.10.000181
ORF1ab/nsp3237T237IaCaaTa1010B.1.5260.000235
ORF1ab/nsp3237T237AAcaGca1010C.370.001161
ORF1ab/nsp3237T237RaCaaGa99All0.000002
ORF1ab/nsp3237T237IaCaaTa99AY.1130.001282
ORF1ab/nsp3237T237IaCaaTa99AY.1190.000318
ORF1ab/nsp3237T237AAcaGca99AY.430.00004
ORF1ab/nsp3237T237IaCaaTa99AY.98.10.000436
ORF1ab/nsp3237T237IaCaaTa99B.1.177.690.013353
ORF1ab/nsp3237T237IaCaaTa99B.1.3240.014446
ORF1ab/nsp3237T237SAcaTca88All0.000002
ORF1ab/nsp3237T237IaCaaTa88AY.1020.000212
ORF1ab/nsp3237T237TacAacG58AY.1020.000133
ORF1ab/nsp3237T237TacAacT38AY.1020.00008
ORF1ab/nsp3237T237RaCaaGa88AY.40.000012
ORF1ab/nsp3237T237TacAacG88B.1.1.3320.25
ORF1ab/nsp3237T237AAcaGca88B.1.2580.000532
ORF1ab/nsp3237T237AAcaGca77AY.1030.000043
ORF1ab/nsp3237T237IaCaaTa77AY.1210.000947
ORF1ab/nsp3237T237AAcaGca77AY.16.10.003289
ORF1ab/nsp3237T237IaCaaTa77AY.4.20.000152
ORF1ab/nsp3237T237IaCaaTa77AY.460.000729
ORF1ab/nsp3237T237IaCaaTa77AY.5.20.017241
ORF1ab/nsp3237T237TacAacG67B.1.10.000109
ORF1ab/nsp3237T237TacAacC17B.1.10.000018
ORF1ab/nsp3237T237IaCaaTa77B.1.1280.004447
ORF1ab/nsp3237T237IaCaaTa77C.36.30.003971
ORF1ab/nsp3237T237AAcaGca77P.10.00011
ORF1ab/nsp3237T237IaCaaTa77P.1.140.000335
ORF1ab/nsp3237T237IaCaaTa66AY.390.000148
ORF1ab/nsp3237T237IaCaaTa66AY.610.000629
ORF1ab/nsp3237T237IaCaaTa55AY.3.10.000426
ORF1ab/nsp3237T237IaCaaTa55AY.320.002662
ORF1ab/nsp3237T237IaCaaTa55AY.450.000608
ORF1ab/nsp3237T237IaCaaTa55AY.750.00028
ORF1ab/nsp3237T237IaCaaTa55AY.850.002136
ORF1ab/nsp3237T237IaCaaTa55B.1.1.2770.003794
ORF1ab/nsp3237T237IaCaaTa55B.1.1.330.002104
ORF1ab/nsp3237T237IaCaaTa55B.1.5960.000436
ORF1ab/nsp3237T237IaCaaTa55B.1.6090.002397
ORF1ab/nsp3237T237IaCaaTa55C.160.005302
ORF1ab/nsp3237T237TacAacG55P.1.10.001588
ORF1ab/nsp3237T237IaCaaTa44AY.116.10.001246
ORF1ab/nsp3237T237AAcaGca44AY.150.008889
ORF1ab/nsp3237T237TacAacG44AY.200.000155
ORF1ab/nsp3237T237IaCaaTa44AY.39.10.000158
ORF1ab/nsp3237T237SAcaTca44AY.40.000006
ORF1ab/nsp3237T237AAcaGca44AY.440.000024
ORF1ab/nsp3237T237TacAacG44AY.440.000024
ORF1ab/nsp3237T237IaCaaTa44AY.46.60.000289
ORF1ab/nsp3237T237PAcaCca44B.10.000037
ORF1ab/nsp3237T237delACA---44B.10.000037
ORF1ab/nsp3237T237delACA---44B.1.10.000073
ORF1ab/nsp3237T237IaCaaTa44B.1.1.410.025316
ORF1ab/nsp3237T237AAcaGca44B.1.1.4160.00362
ORF1ab/nsp3237T237KaCaaAa44B.1.1.70.000004
ORF1ab/nsp3237T237IaCaaTa44B.1.1600.000125
ORF1ab/nsp3237T237TacAacT44B.1.221.20.016064
ORF1ab/nsp3237T237IaCaaTa44B.1.360.000584
ORF1ab/nsp3237T237IaCaaTa44B.1.3960.002823
ORF1ab/nsp3237T237IaCaaTa44B.1.4370.083333
ORF1ab/nsp3237T237IaCaaTa44B.1.6200.003784
ORF1ab/nsp3237T237IaCaaTa44C.360.003643
ORF1ab/nsp3237T237AAcaGca33A0.001161
ORF1ab/nsp3237T237del1acAac-23All0
ORF1ab/nsp3237T237del1aCAaT-13All0
ORF1ab/nsp3237T237IaCaaTa33AY.1200.000112
ORF1ab/nsp3237T237IaCaaTa33AY.230.000209
ORF1ab/nsp3237T237delACA---33AY.40.000005
ORF1ab/nsp3237T237PAcaCca33AY.440.000018
ORF1ab/nsp3237T237IaCaaTa33AY.470.000093
ORF1ab/nsp3237T237IaCaaTa33AY.540.000286
ORF1ab/nsp3237T237IaCaaTa33AY.620.001307
ORF1ab/nsp3237T237IaCaaTa33AY.7.10.000338
ORF1ab/nsp3237T237AAcaGca33AY.750.000168
ORF1ab/nsp3237T237IaCaaTa33B.1.1.10.00098
ORF1ab/nsp3237T237IaCaaTa33B.1.1.2140.000166
ORF1ab/nsp3237T237delACA---33B.1.1.330.001263
ORF1ab/nsp3237T237IaCaaTa33B.1.1.3480.002389
ORF1ab/nsp3237T237IaCaaTa33B.1.1.370.000579
ORF1ab/nsp3237T237IaCaaTa33B.1.1.4090.008499
ORF1ab/nsp3237T237AAcaGca33B.1.1.5190.000119
ORF1ab/nsp3237T237AAcaGca33B.1.1570.008955
ORF1ab/nsp3237T237TacAacG33B.1.177.860.00055
ORF1ab/nsp3237T237IaCaaTa33B.1.258.170.000312
ORF1ab/nsp3237T237IaCaaTa33B.1.36.290.001552
ORF1ab/nsp3237T237IaCaaTa33B.1.3670.002377
ORF1ab/nsp3237T237AAcaGca33B.1.4270.000151
ORF1ab/nsp3237T237AAcaGca33B.1.4290.000071
ORF1ab/nsp3237T237IaCaaTa33B.1.466.20.001174
ORF1ab/nsp3237T237PAcaCca33B.1.617.20.000011
ORF1ab/nsp3237T237IaCaaTa33B.1.6350.052632
ORF1ab/nsp3237T237IaCaaTa33D.20.000225
ORF1ab/nsp3237T237IaCaaTa33N.30.017442
ORF1ab/nsp3237T237KaCaaAa33P.10.000047
ORF1ab/nsp3237T237TacAacT33P.10.000047
ORF1ab/nsp3237T237IaCaaTa33P.1.10.000953
ORF1ab/nsp3237T237PAcaCca22A.90.090909
ORF1ab/nsp3237T237IaCaaTa22AD.20.000438
ORF1ab/nsp3237T237IaCaaTa22AU.10.002532
ORF1ab/nsp3237T237PAcaCca22AY.1000.000092
ORF1ab/nsp3237T237TacAacC12AY.1030.000006
ORF1ab/nsp3237T237TacAacG12AY.1030.000006
ORF1ab/nsp3237T237IaCaaTa22AY.1070.000932
ORF1ab/nsp3237T237AAcaGca22AY.1140.000462
ORF1ab/nsp3237T237IaCaaTa22AY.1170.000169
ORF1ab/nsp3237T237IaCaaTa22AY.130.000322
ORF1ab/nsp3237T237TacAacG22AY.250.000012
ORF1ab/nsp3237T237KaCaaAa22AY.40.000003
ORF1ab/nsp3237T237TacAacG22AY.4.50.000215
ORF1ab/nsp3237T237AAcaGca22AY.450.000243
ORF1ab/nsp3237T237TacAacT22AY.50.000041
ORF1ab/nsp3237T237IaCaaTa22AY.5.40.000553
ORF1ab/nsp3237T237IaCaaTa22B.1.1.2010.04878
ORF1ab/nsp3237T237IaCaaTa22B.1.1.2160.001781
ORF1ab/nsp3237T237IaCaaTa22B.1.1.2550.006061
ORF1ab/nsp3237T237IaCaaTa22B.1.1.280.000622
ORF1ab/nsp3237T237delACA---22B.1.1.3480.001592
ORF1ab/nsp3237T237IaCaaTa22B.1.1.610.017544
ORF1ab/nsp3237T237AAcaGca22B.1.1770.000026
ORF1ab/nsp3237T237IaCaaTa22B.1.177.740.030303
ORF1ab/nsp3237T237KaCaaAa22B.1.20.000018
ORF1ab/nsp3237T237AAcaGca22B.1.2400.000431
ORF1ab/nsp3237T237IaCaaTa22B.1.258.180.2
ORF1ab/nsp3237T237AAcaGca22B.1.3480.036364
ORF1ab/nsp3237T237AAcaGca22B.1.3510.000059
ORF1ab/nsp3237T237IaCaaTa22B.1.36.80.002
ORF1ab/nsp3237T237TacAacG22B.1.438.10.000215
ORF1ab/nsp3237T237IaCaaTa22B.1.4700.002809
ORF1ab/nsp3237T237IaCaaTa22B.1.5610.000794
ORF1ab/nsp3237T237AAcaGca22B.1.6090.000959
ORF1ab/nsp3237T237IaCaaTa22B.1.617.10.000258
ORF1ab/nsp3237T237KaCaaAa22B.1.617.20.000008
ORF1ab/nsp3237T237IaCaaTa22B.1.6190.001742
ORF1ab/nsp3237T237VACaGTa22B.1.621.10.001012
ORF1ab/nsp3237T237IaCaaTa22B.1.6230.001073
ORF1ab/nsp3237T237AAcaGca22B.1.6330.083333
ORF1ab/nsp3237T237IaCaaTa22B.400.000729
ORF1ab/nsp3237T237IaCaaTa22B.60.00182
ORF1ab/nsp3237T237IaCaaTa22C.10.004785
ORF1ab/nsp3237T237delACA---22N.60.014184
ORF1ab/nsp3237T237AAcaGca22P.1.150.000465
ORF1ab/nsp3237T237TacAacG11A.2.20.001689
ORF1ab/nsp3237T237SAcaTca11A.2.40.003367
ORF1ab/nsp3237T237IaCaaTa11A.23.10.000704
ORF1ab/nsp3237T237IaCaaTa11A.270.001656
ORF1ab/nsp3237T237IaCaaTa11AK.10.012658
ORF1ab/nsp3237T237NaCAaAT11All0
ORF1ab/nsp3237T237IaCaaTa11AY.10.000396
ORF1ab/nsp3237T237del1acAac-11AY.1000.000046
ORF1ab/nsp3237T237IaCaaTa11AY.1010.00049
ORF1ab/nsp3237T237PAcaCca11AY.1030.000006
ORF1ab/nsp3237T237TacAacG11AY.1040.001984
ORF1ab/nsp3237T237TacAacG11AY.1070.000466
ORF1ab/nsp3237T237delACA---11AY.110.001339
ORF1ab/nsp3237T237IaCaaTa11AY.1100.000113
ORF1ab/nsp3237T237TacAacT11AY.1110.000183
ORF1ab/nsp3237T237AAcaGca11AY.1130.000142
ORF1ab/nsp3237T237IaCaaTa11AY.1160.000287
ORF1ab/nsp3237T237IaCaaTa11AY.1180.000063
ORF1ab/nsp3237T237PAcaCca11AY.1190.000035
ORF1ab/nsp3237T237PAcaCca11AY.120.000316
ORF1ab/nsp3237T237PAcaCca11AY.1200.000037
ORF1ab/nsp3237T237delACA---11AY.1200.000037
ORF1ab/nsp3237T237del1acAac-11AY.120.10.000321
ORF1ab/nsp3237T237IaCaaTa11AY.120.2.10.000498
ORF1ab/nsp3237T237TacAacG11AY.160.00038
ORF1ab/nsp3237T237IaCaaTa11AY.160.00038
ORF1ab/nsp3237T237IaCaaTa11AY.20.000356
ORF1ab/nsp3237T237AAcaGca11AY.200.000039
ORF1ab/nsp3237T237AAcaGca11AY.230.00007
ORF1ab/nsp3237T237PAcaCca11AY.230.00007
ORF1ab/nsp3237T237PAcaCca11AY.250.000006
ORF1ab/nsp3237T237IaCaaTa11AY.270.000065
ORF1ab/nsp3237T237IaCaaTa11AY.29.10.000221
ORF1ab/nsp3237T237TacAacC11AY.29.10.000221
ORF1ab/nsp3237T237IaCaaTa11AY.300.000396
ORF1ab/nsp3237T237TacAacT11AY.330.000067
ORF1ab/nsp3237T237IaCaaTa11AY.340.000097
ORF1ab/nsp3237T237TacAacT11AY.360.000148
ORF1ab/nsp3237T237KaCaaAa11AY.370.000316
ORF1ab/nsp3237T237PAcaCca11AY.380.000499
ORF1ab/nsp3237T237TacAacG11AY.39.10.00004
ORF1ab/nsp3237T237PAcaCca11AY.40.000002
ORF1ab/nsp3237T237VACaGTa11AY.40.000002
ORF1ab/nsp3237T237AAcaGca11AY.4.20.000022
ORF1ab/nsp3237T237IaCaaTa11AY.4.30.000842
ORF1ab/nsp3237T237KaCaaAa11AY.440.000006
ORF1ab/nsp3237T237TacAacG11AY.460.000104
ORF1ab/nsp3237T237IaCaaTa11AY.46.40.000165
ORF1ab/nsp3237T237IaCaaTa11AY.490.003195
ORF1ab/nsp3237T237AAcaGca11AY.50.000021
ORF1ab/nsp3237T237IaCaaTa11AY.5.30.000337
ORF1ab/nsp3237T237AAcaGca11AY.520.000814
ORF1ab/nsp3237T237IaCaaTa11AY.530.000288
ORF1ab/nsp3237T237IaCaaTa11AY.570.000656
ORF1ab/nsp3237T237TacAacG11AY.590.00053
ORF1ab/nsp3237T237IaCaaTa11AY.60.000041
ORF1ab/nsp3237T237AAcaGca11AY.610.000105
ORF1ab/nsp3237T237IaCaaTa11AY.650.000533
ORF1ab/nsp3237T237IaCaaTa11AY.670.000464
ORF1ab/nsp3237T237IaCaaTa11AY.740.000116
ORF1ab/nsp3237T237TacAacG11AY.740.000116
ORF1ab/nsp3237T237AAcaGca11AY.800.001129
ORF1ab/nsp3237T237IaCaaTa11AY.840.000437
ORF1ab/nsp3237T237TacAacC11AY.9.20.000037
ORF1ab/nsp3237T237IaCaaTa11AY.9.20.000037
ORF1ab/nsp3237T237AAcaGca11AY.910.00073
ORF1ab/nsp3237T237IaCaaTa11AY.930.000273
ORF1ab/nsp3237T237TacAacG11AY.980.000079
ORF1ab/nsp3237T237IaCaaTa11B0.000128
ORF1ab/nsp3237T237del1aCAaT-11B.10.000009
ORF1ab/nsp3237T237VACaGTa11B.10.000009
ORF1ab/nsp3237T237KaCaaAa11B.10.000009
ORF1ab/nsp3237T237KaCaaAa11B.1.10.000018
ORF1ab/nsp3237T237IaCaaTa11B.1.1.100.001115
ORF1ab/nsp3237T237TacAacT11B.1.1.1530.001095
ORF1ab/nsp3237T237KaCaaAa11B.1.1.1530.001095
ORF1ab/nsp3237T237IaCaaTa11B.1.1.1610.003534
ORF1ab/nsp3237T237IaCaaTa11B.1.1.1660.033333
ORF1ab/nsp3237T237IaCaaTa11B.1.1.1890.001513
ORF1ab/nsp3237T237AAcaGca11B.1.1.2160.00089
ORF1ab/nsp3237T237TacAacT11B.1.1.2220.000204
ORF1ab/nsp3237T237delACA---11B.1.1.2220.000204
ORF1ab/nsp3237T237AAcaGca11B.1.1.2360.006897
ORF1ab/nsp3237T237IaCaaTa11B.1.1.2630.001558
ORF1ab/nsp3237T237IaCaaTa11B.1.1.2830.023256
ORF1ab/nsp3237T237IaCaaTa11B.1.1.2860.002899
ORF1ab/nsp3237T237IaCaaTa11B.1.1.2940.001266
ORF1ab/nsp3237T237IaCaaTa11B.1.1.3060.000438
ORF1ab/nsp3237T237AAcaGca11B.1.1.3170.000412
ORF1ab/nsp3237T237IaCaaTa11B.1.1.3180.000302
ORF1ab/nsp3237T237TacAacG11B.1.1.370.000193
ORF1ab/nsp3237T237IaCaaTa11B.1.1.3750.011905
ORF1ab/nsp3237T237IaCaaTa11B.1.1.390.00051
ORF1ab/nsp3237T237IaCaaTa11B.1.1.4160.000905
ORF1ab/nsp3237T237AAcaGca11B.1.1.4350.034483
ORF1ab/nsp3237T237AAcaGca11B.1.1.5260.003546
ORF1ab/nsp3237T237AAcaGca11B.1.1.570.011494
ORF1ab/nsp3237T237SAcaTca11B.1.1.70.000001
ORF1ab/nsp3237T237IaCaaTa11B.1.1.700.000341
ORF1ab/nsp3237T237AAcaGca11B.1.1.990.02381
ORF1ab/nsp3237T237IaCaaTa11B.1.1110.001175
ORF1ab/nsp3237T237IaCaaTa11B.1.1570.002985
ORF1ab/nsp3237T237TacAacT11B.1.1600.000031
ORF1ab/nsp3237T237RaCaaGa11B.1.1770.000013
ORF1ab/nsp3237T237IaCaaTa11B.1.177.410.0025
ORF1ab/nsp3237T237IaCaaTa11B.1.177.480.003125
ORF1ab/nsp3237T237IaCaaTa11B.1.177.560.000668
ORF1ab/nsp3237T237IaCaaTa11B.1.177.570.000281
ORF1ab/nsp3237T237IaCaaTa11B.1.177.600.000218
ORF1ab/nsp3237T237IaCaaTa11B.1.177.70.000165
ORF1ab/nsp3237T237AAcaGca11B.1.177.730.000566
ORF1ab/nsp3237T237IaCaaTa11B.1.177.820.000477
ORF1ab/nsp3237T237AAcaGca11B.1.1790.003759
ORF1ab/nsp3237T237NaCAaAT11B.1.20.000009
ORF1ab/nsp3237T237TacAacT11B.1.2210.000071
ORF1ab/nsp3237T237IaCaaTa11B.1.2210.000071
ORF1ab/nsp3237T237IaCaaTa11B.1.2320.000537
ORF1ab/nsp3237T237IaCaaTa11B.1.2430.00007
ORF1ab/nsp3237T237IaCaaTa11B.1.2790.000514
ORF1ab/nsp3237T237TacAacG11B.1.2840.013158
ORF1ab/nsp3237T237PAcaCca11B.1.2980.002114
ORF1ab/nsp3237T237IaCaaTa11B.1.3210.034483
ORF1ab/nsp3237T237TacAacG11B.1.3510.00003
ORF1ab/nsp3237T237TacAacG11B.1.360.000146
ORF1ab/nsp3237T237TacAacC11B.1.36.290.000517
ORF1ab/nsp3237T237IaCaaTa11B.1.3630.012987
ORF1ab/nsp3237T237AAcaGca11B.1.3670.000792
ORF1ab/nsp3237T237AAcaGca11B.1.3750.00082
ORF1ab/nsp3237T237TacAacG11B.1.3890.001002
ORF1ab/nsp3237T237IaCaaTa11B.1.3980.002976
ORF1ab/nsp3237T237IaCaaTa11B.1.4230.010204
ORF1ab/nsp3237T237delACA---11B.1.4290.000024
ORF1ab/nsp3237T237IaCaaTa11B.1.4530.003236
ORF1ab/nsp3237T237TacAacT11B.1.466.20.000391
ORF1ab/nsp3237T237AAcaGca11B.1.466.20.000391
ORF1ab/nsp3237T237PAcaCca11B.1.4700.001404
ORF1ab/nsp3237T237delACA---11B.1.4790.038462
ORF1ab/nsp3237T237IaCaaTa11B.1.5090.000866
ORF1ab/nsp3237T237IaCaaTa11B.1.5250.000113
ORF1ab/nsp3237T237AAcaGca11B.1.5330.009615
ORF1ab/nsp3237T237IaCaaTa11B.1.5740.002151
ORF1ab/nsp3237T237IaCaaTa11B.1.5750.000303
ORF1ab/nsp3237T237IaCaaTa11B.1.5950.000261
ORF1ab/nsp3237T237AAcaGca11B.1.5960.000087
ORF1ab/nsp3237T237delACA---11B.1.617.20.000004
ORF1ab/nsp3237T237SAcaTca11B.1.617.20.000004
ORF1ab/nsp3237T237TacAacC11B.1.6190.000871
ORF1ab/nsp3237T237delACA---11B.1.6300.005236
ORF1ab/nsp3237T237AAcaGca11B.1.6380.052632
ORF1ab/nsp3237T237IaCaaTa11B.1.930.000934
ORF1ab/nsp3237T237AAcaGca11B.40.002208
ORF1ab/nsp3237T237delACA---11C.170.055556
ORF1ab/nsp3237T237IaCaaTa11C.37.10.002618
ORF1ab/nsp3237T237AAcaGca11D.20.000075
ORF1ab/nsp3237T237SAcaTca11D.20.000075
ORF1ab/nsp3237T237IaCaaTa11N.50.001767
ORF1ab/nsp3237T237delACA---11P.10.000016
ORF1ab/nsp3237T237TacAacG11P.1.120.000484
ORF1ab/nsp3237T237AAcaGca11P.1.120.000484
ORF1ab/nsp3237T237TacAacG11P.1.150.000232
ORF1ab/nsp3237T237IaCaaTa11P.1.170.000162
ORF1ab/nsp3237T237AAcaGca11P.1.70.000319
ORF1ab/nsp3237T237IaCaaTa11P.70.004367
ORF1ab/nsp3237T237IaCaaTa11Q.10.000126
ORF1ab/nsp3237T237IaCaaTa11Q.40.000455
ORF1ab/nsp3237T237TacAacG11Q.80.000165
ORF1ab/nsp3237T237delACA---11R.10.00009

CoV-GLUE is still in development. CoV-GLUE was originally developed as part of COG-UK by Josh Singer using the GLUE framework at the MRC-University of Glasgow Centre for Virus Research (CVR). In 2021 it was redeveloped by Richard Orton to scale to the millions of genome sequences available. We acknowledge support from the MRC (MC_UU_12014/12), WT (220977/Z/20/Z) and UKRI G2P (MR/W005611/1). Please contact Richard Orton with any queries: Richard.Orton@glasgow.ac.uk

CoV-GLUE uses sequence data from GISAID. GISAID data provided via this web application is subject to GISAID's Terms and Conditions.