CoV-GLUEGenomeCountriesLineagesMutationsInsertionsDeletionsUpdated:

CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF1ab/nsp3 : CodonNum = 218

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF1ab/nsp3218D218ED1036EnonsyngaCgaA293429040.9897753371-3373
ORF1ab/nsp3218D218ED1036EnonsyngaCgaG2934300.01022493371-3373
ORF1ab/nsp3218D218GD1036GnonsyngAcgGc7497390.9866493371-3373
ORF1ab/nsp3218D218GD1036GnonsyngACgGA749100.01335113371-3373
ORF1ab/nsp3218D218AD1036AnonsyngAcgCc49849813371-3373
ORF1ab/nsp3218D218DD1036DsyngaCgaT45645613371-3373
ORF1ab/nsp3218D218ND1036NnonsynGacAac42242213371-3373
ORF1ab/nsp3218D218YD1036YnonsynGacTac14914913371-3373
ORF1ab/nsp3218D218delD1036deldelGAC---303013371-3373
ORF1ab/nsp3218D218HD1036HnonsynGacCac5513371-3373
ORF1ab/nsp3218D218VD1036VnonsyngAcgTc2213371-3373
ORF1ab/nsp3218D218del1D1036del1delgaCga-210.53371-3373
ORF1ab/nsp3218D218del1D1036del1delGac-ac210.53371-3373
ORF1ab/nsp3218D218XD1036XnonsynGaCTaA210.53371-3373
ORF1ab/nsp3218D218XD1036XnonsynGACTGA210.53371-3373
ORF1ab/nsp3218D218FD1036FnonsynGAcTTc1113371-3373
ORF1ab/nsp3218D218PD1036PnonsynGAcCCc1113371-3373
ORF1ab/nsp3218D218CD1036CnonsynGAcTGc1113371-3373

Details of the mutation no within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF1ab/nsp3218D218EgaCgaA29042934All0.000555
ORF1ab/nsp3218D218EgaCgaG302934All0.000006
ORF1ab/nsp3218D218EgaCgaA17491749B.1.10.031728
ORF1ab/nsp3218D218GgAcgGc739749All0.000141
ORF1ab/nsp3218D218GgACgGA10749All0.000002
ORF1ab/nsp3218D218EgaCgaA738738B.1.1.2940.934177
ORF1ab/nsp3218D218AgAcgCc498498All0.000095
ORF1ab/nsp3218D218DgaCgaT456456All0.000087
ORF1ab/nsp3218D218GgAcgGc424424AY.40.00066
ORF1ab/nsp3218D218NGacAac422422All0.000081
ORF1ab/nsp3218D218AgAcgCc276276B.1.1.70.000247
ORF1ab/nsp3218D218NGacAac217217B.1.1.70.000194
ORF1ab/nsp3218D218GgAcgGc155155B.1.1.70.000139
ORF1ab/nsp3218D218YGacTac149149All0.000028
ORF1ab/nsp3218D218AgAcgCc102102B.1.20.000898
ORF1ab/nsp3218D218DgaCgaT8484AA.10.608696
ORF1ab/nsp3218D218NGacAac7272B.1.1.5190.002859
ORF1ab/nsp3218D218EgaCgaA6464B.1.1.4651
ORF1ab/nsp3218D218DgaCgaT6363B.1.1.70.000056
ORF1ab/nsp3218D218EgaCgaA6060B.1.1.3660.952381
ORF1ab/nsp3218D218EgaCgaA5656B.1.1.4660.486957
ORF1ab/nsp3218D218EgaCgaA5151B.1.1.4670.980769
ORF1ab/nsp3218D218EgaCgaA4343M.11
ORF1ab/nsp3218D218AgAcgCc3838B.1.4220.030869
ORF1ab/nsp3218D218AgAcgCc3131AY.40.000048
ORF1ab/nsp3218D218delGAC---3030All0.000006
ORF1ab/nsp3218D218EgaCgaG2729B.1.1.70.000024
ORF1ab/nsp3218D218EgaCgaA229B.1.1.70.000002
ORF1ab/nsp3218D218GgAcgGc2929P.20.005412
ORF1ab/nsp3218D218GgAcgGc2727B.1.1.3180.008147
ORF1ab/nsp3218D218DgaCgaT2626AY.40.00004
ORF1ab/nsp3218D218EgaCgaA2525B.10.000229
ORF1ab/nsp3218D218YGacTac2323B.1.617.20.000087
ORF1ab/nsp3218D218DgaCgaT2121AY.1180.001316
ORF1ab/nsp3218D218DgaCgaT2020AY.30.000199
ORF1ab/nsp3218D218YGacTac2020B.1.1.70.000018
ORF1ab/nsp3218D218GgAcgGc2020D.20.001501
ORF1ab/nsp3218D218EgaCgaA1818B.1.1.2711
ORF1ab/nsp3218D218AgAcgCc1717AY.430.000075
ORF1ab/nsp3218D218DgaCgaT1717B.1.1770.000224
ORF1ab/nsp3218D218DgaCgaT1717B.1.4290.0004
ORF1ab/nsp3218D218DgaCgaT1717B.1.617.20.000064
ORF1ab/nsp3218D218DgaCgaT1616AY.440.000097
ORF1ab/nsp3218D218NGacAac1616U.30.061776
ORF1ab/nsp3218D218DgaCgaT1414AY.1030.000087
ORF1ab/nsp3218D218DgaCgaT1414B.10.000128
ORF1ab/nsp3218D218NGacAac1313AY.39.10.000515
ORF1ab/nsp3218D218EgaCgaA1313M.31
ORF1ab/nsp3218D218DgaCgaT1212B.1.5960.001046
ORF1ab/nsp3218D218EgaCgaA1212M.21
ORF1ab/nsp3218D218DgaCgaT1111AY.430.000049
ORF1ab/nsp3218D218AgAcgCc1111B.1.1260.014031
ORF1ab/nsp3218D218GgAcgGc1111B.1.617.20.000041
ORF1ab/nsp3218D218YGacTac1010AY.940.004427
ORF1ab/nsp3218D218GgACgGA710B.1.10.000127
ORF1ab/nsp3218D218GgAcgGc310B.1.10.000054
ORF1ab/nsp3218D218GgAcgGc99AY.1030.000056
ORF1ab/nsp3218D218DgaCgaT99AY.140.000792
ORF1ab/nsp3218D218GgAcgGc99AY.430.00004
ORF1ab/nsp3218D218YGacTac99B.10.000082
ORF1ab/nsp3218D218NGacAac99B.1.4290.000212
ORF1ab/nsp3218D218YGacTac88AY.40.000012
ORF1ab/nsp3218D218DgaCgaT88B.1.360.001167
ORF1ab/nsp3218D218YGacTac77AY.1030.000043
ORF1ab/nsp3218D218EgaCgaA77B.1.1.1610.024735
ORF1ab/nsp3218D218EgaCgaA77B.1.177.810.001325
ORF1ab/nsp3218D218GgAcgGc77B.1.5960.00061
ORF1ab/nsp3218D218YGacTac77B.1.6370.000512
ORF1ab/nsp3218D218NGacAac66AY.1090.004438
ORF1ab/nsp3218D218DgaCgaT66B.1.1.2850.039216
ORF1ab/nsp3218D218NGacAac66B.1.3620.009245
ORF1ab/nsp3218D218DgaCgaT66B.1.3660.029268
ORF1ab/nsp3218D218HGacCac55All0.000001
ORF1ab/nsp3218D218AgAcgCc55AY.30.00005
ORF1ab/nsp3218D218DgaCgaT55AY.390.000124
ORF1ab/nsp3218D218GgAcgGc35B.10.000027
ORF1ab/nsp3218D218GgACgGA25B.10.000018
ORF1ab/nsp3218D218EgaCgaA55B.1.1.280.001556
ORF1ab/nsp3218D218NGacAac55B.1.177.60.004883
ORF1ab/nsp3218D218NGacAac55B.1.20.000044
ORF1ab/nsp3218D218GgAcgGc55B.1.4290.000118
ORF1ab/nsp3218D218NGacAac55C.370.00058
ORF1ab/nsp3218D218DgaCgaT55P.10.000079
ORF1ab/nsp3218D218NGacAac44A.10.001127
ORF1ab/nsp3218D218AgAcgCc44AY.1030.000025
ORF1ab/nsp3218D218YGacTac44AY.250.000024
ORF1ab/nsp3218D218NGacAac44AY.4.40.001637
ORF1ab/nsp3218D218DgaCgaT44AY.540.000381
ORF1ab/nsp3218D218YGacTac44AY.9.10.000335
ORF1ab/nsp3218D218EgaCgaA44B0.000511
ORF1ab/nsp3218D218NGacAac44B.10.000037
ORF1ab/nsp3218D218NGacAac44B.1.1.2840.00043
ORF1ab/nsp3218D218EgaCgaA44B.1.1.4090.011331
ORF1ab/nsp3218D218YGacTac44B.1.110.30.002874
ORF1ab/nsp3218D218DgaCgaT44B.1.20.000035
ORF1ab/nsp3218D218YGacTac44B.1.2580.000266
ORF1ab/nsp3218D218AgAcgCc44B.1.617.20.000015
ORF1ab/nsp3218D218NGacAac44B.3.10.006633
ORF1ab/nsp3218D218GgAcgGc33AY.116.10.000934
ORF1ab/nsp3218D218DgaCgaT33AY.1200.000112
ORF1ab/nsp3218D218YGacTac33AY.130.000483
ORF1ab/nsp3218D218NGacAac33AY.250.000018
ORF1ab/nsp3218D218NGacAac33AY.40.000005
ORF1ab/nsp3218D218EgaCgaA33AY.430.000013
ORF1ab/nsp3218D218GgAcgGc33AY.440.000018
ORF1ab/nsp3218D218delGAC---33B.10.000027
ORF1ab/nsp3218D218HGacCac33B.10.000027
ORF1ab/nsp3218D218DgaCgaT33B.1.10.000054
ORF1ab/nsp3218D218delGAC---33B.1.10.000054
ORF1ab/nsp3218D218DgaCgaT33B.1.1.1630.022901
ORF1ab/nsp3218D218DgaCgaT33B.1.1.2140.000166
ORF1ab/nsp3218D218EgaCgaA33B.1.1.2200.005576
ORF1ab/nsp3218D218YGacTac33B.1.1.2220.000612
ORF1ab/nsp3218D218delGAC---33B.1.1.330.001263
ORF1ab/nsp3218D218EgaCgaA33B.1.1.3760.017857
ORF1ab/nsp3218D218GgAcgGc33B.1.1.4320.003797
ORF1ab/nsp3218D218EgaCgaA33B.1.1.4640.004418
ORF1ab/nsp3218D218EgaCgaA33B.1.1770.00004
ORF1ab/nsp3218D218GgAcgGc33B.1.20.000026
ORF1ab/nsp3218D218EgaCgaA33B.1.2210.000213
ORF1ab/nsp3218D218NGacAac33B.1.360.000438
ORF1ab/nsp3218D218NGacAac33B.1.4680.017143
ORF1ab/nsp3218D218EgaCgaA33B.1.617.20.000011
ORF1ab/nsp3218D218XGACTGA120.055556
ORF1ab/nsp3218D218GgACgGA120.055556
ORF1ab/nsp3218D218XGaCTaA120.055556
ORF1ab/nsp3218D218GgAcgGc120.055556
ORF1ab/nsp3218D218YGacTac22A0.000774
ORF1ab/nsp3218D218VgAcgTc22All0
ORF1ab/nsp3218D218del1Gac-ac12All0
ORF1ab/nsp3218D218XGACTGA12All0
ORF1ab/nsp3218D218XGaCTaA12All0
ORF1ab/nsp3218D218del1gaCga-12All0
ORF1ab/nsp3218D218YGacTac22AY.1160.000574
ORF1ab/nsp3218D218GgAcgGc22AY.1180.000125
ORF1ab/nsp3218D218DgaCgaT22AY.250.000012
ORF1ab/nsp3218D218GgAcgGc22AY.250.000012
ORF1ab/nsp3218D218NGacAac22AY.270.000129
ORF1ab/nsp3218D218DgaCgaT22AY.290.000032
ORF1ab/nsp3218D218AgAcgCc22AY.34.10.00102
ORF1ab/nsp3218D218GgAcgGc22AY.390.000049
ORF1ab/nsp3218D218YGacTac22AY.430.000009
ORF1ab/nsp3218D218NGacAac22AY.440.000012
ORF1ab/nsp3218D218DgaCgaT22AY.50.000041
ORF1ab/nsp3218D218YGacTac22AY.750.000112
ORF1ab/nsp3218D218YGacTac22AY.98.10.000097
ORF1ab/nsp3218D218DgaCgaT22B0.000256
ORF1ab/nsp3218D218delGAC---22B.1.1.3480.001592
ORF1ab/nsp3218D218GgAcgGc22B.1.1.5190.000079
ORF1ab/nsp3218D218DgaCgaT22B.1.110.30.001437
ORF1ab/nsp3218D218NGacAac22B.1.177.810.000379
ORF1ab/nsp3218D218DgaCgaT22B.1.4270.000101
ORF1ab/nsp3218D218DgaCgaT22B.1.438.10.000215
ORF1ab/nsp3218D218EgaCgaA22B.1.4450.023529
ORF1ab/nsp3218D218DgaCgaT22B.1.5250.000226
ORF1ab/nsp3218D218DgaCgaT22B.1.5260.000047
ORF1ab/nsp3218D218YGacTac22B.6.60.001778
ORF1ab/nsp3218D218delGAC---22N.60.014184
ORF1ab/nsp3218D218GgAcgGc22P.10.000032
ORF1ab/nsp3218D218NGacAac22P.1.150.000465
ORF1ab/nsp3218D218DgaCgaT22P.1.150.000465
ORF1ab/nsp3218D218YGacTac22Q.40.00091
ORF1ab/nsp3218D218EgaCgaG22Q.80.00033
ORF1ab/nsp3218D218EgaCgaA110.055556
ORF1ab/nsp3218D218YGacTac110.055556
ORF1ab/nsp3218D218CGAcTGc110.055556
ORF1ab/nsp3218D218AgAcgCc11A.270.001656
ORF1ab/nsp3218D218PGAcCCc11All0
ORF1ab/nsp3218D218FGAcTTc11All0
ORF1ab/nsp3218D218CGAcTGc11All0
ORF1ab/nsp3218D218NGacAac11AY.10.000396
ORF1ab/nsp3218D218DgaCgaT11AY.1000.000046
ORF1ab/nsp3218D218GgAcgGc11AY.1000.000046
ORF1ab/nsp3218D218DgaCgaT11AY.1010.00049
ORF1ab/nsp3218D218YGacTac11AY.1020.000027
ORF1ab/nsp3218D218AgAcgCc11AY.1020.000027
ORF1ab/nsp3218D218NGacAac11AY.1050.000643
ORF1ab/nsp3218D218NGacAac11AY.1060.000335
ORF1ab/nsp3218D218DgaCgaT11AY.1060.000335
ORF1ab/nsp3218D218delGAC---11AY.110.001339
ORF1ab/nsp3218D218DgaCgaT11AY.1100.000113
ORF1ab/nsp3218D218DgaCgaT11AY.1110.000183
ORF1ab/nsp3218D218DgaCgaT11AY.1160.000287
ORF1ab/nsp3218D218YGacTac11AY.1180.000063
ORF1ab/nsp3218D218VgAcgTc11AY.1190.000035
ORF1ab/nsp3218D218GgAcgGc11AY.1190.000035
ORF1ab/nsp3218D218YGacTac11AY.1190.000035
ORF1ab/nsp3218D218DgaCgaT11AY.120.000316
ORF1ab/nsp3218D218GgAcgGc11AY.1200.000037
ORF1ab/nsp3218D218delGAC---11AY.1200.000037
ORF1ab/nsp3218D218YGacTac11AY.1210.000135
ORF1ab/nsp3218D218YGacTac11AY.140.000088
ORF1ab/nsp3218D218YGacTac11AY.16.10.00047
ORF1ab/nsp3218D218AgAcgCc11AY.190.00114
ORF1ab/nsp3218D218DgaCgaT11AY.200.000039
ORF1ab/nsp3218D218DgaCgaT11AY.230.00007
ORF1ab/nsp3218D218delGAC---11AY.250.000006
ORF1ab/nsp3218D218NGacAac11AY.260.000028
ORF1ab/nsp3218D218GgAcgGc11AY.260.000028
ORF1ab/nsp3218D218NGacAac11AY.30.00001
ORF1ab/nsp3218D218NGacAac11AY.3.10.000085
ORF1ab/nsp3218D218DgaCgaT11AY.340.000097
ORF1ab/nsp3218D218GgAcgGc11AY.340.000097
ORF1ab/nsp3218D218DgaCgaT11AY.370.000316
ORF1ab/nsp3218D218YGacTac11AY.390.000025
ORF1ab/nsp3218D218NGacAac11AY.390.000025
ORF1ab/nsp3218D218DgaCgaT11AY.39.10.00004
ORF1ab/nsp3218D218delGAC---11AY.40.000002
ORF1ab/nsp3218D218YGacTac11AY.410.000294
ORF1ab/nsp3218D218DgaCgaT11AY.420.00004
ORF1ab/nsp3218D218NGacAac11AY.420.00004
ORF1ab/nsp3218D218GgAcgGc11AY.420.00004
ORF1ab/nsp3218D218NGacAac11AY.430.000004
ORF1ab/nsp3218D218delGAC---11AY.430.000004
ORF1ab/nsp3218D218HGacCac11AY.440.000006
ORF1ab/nsp3218D218YGacTac11AY.440.000006
ORF1ab/nsp3218D218delGAC---11AY.450.000122
ORF1ab/nsp3218D218GgAcgGc11AY.46.20.000635
ORF1ab/nsp3218D218DgaCgaT11AY.46.50.000198
ORF1ab/nsp3218D218NGacAac11AY.470.000031
ORF1ab/nsp3218D218DgaCgaT11AY.470.000031
ORF1ab/nsp3218D218YGacTac11AY.50.000021
ORF1ab/nsp3218D218delGAC---11AY.5.30.000337
ORF1ab/nsp3218D218YGacTac11AY.520.000814
ORF1ab/nsp3218D218delGAC---11AY.540.000095
ORF1ab/nsp3218D218DgaCgaT11AY.570.000656
ORF1ab/nsp3218D218DgaCgaT11AY.60.000041
ORF1ab/nsp3218D218DgaCgaT11AY.610.000105
ORF1ab/nsp3218D218DgaCgaT11AY.680.000274
ORF1ab/nsp3218D218DgaCgaT11AY.810.001992
ORF1ab/nsp3218D218YGacTac11AY.850.000427
ORF1ab/nsp3218D218delGAC---11AY.90.000068
ORF1ab/nsp3218D218DgaCgaT11AY.90.000068
ORF1ab/nsp3218D218GgAcgGc11AY.98.10.000048
ORF1ab/nsp3218D218YGacTac11AY.99.20.000092
ORF1ab/nsp3218D218YGacTac11B0.000128
ORF1ab/nsp3218D218AgAcgCc11B.10.000009
ORF1ab/nsp3218D218YGacTac11B.1.10.000018
ORF1ab/nsp3218D218AgAcgCc11B.1.10.000018
ORF1ab/nsp3218D218NGacAac11B.1.10.000018
ORF1ab/nsp3218D218NGacAac11B.1.1.10.000327
ORF1ab/nsp3218D218EgaCgaA11B.1.1.1350.004695
ORF1ab/nsp3218D218FGAcTTc11B.1.1.1390.022727
ORF1ab/nsp3218D218DgaCgaT11B.1.1.1530.001095
ORF1ab/nsp3218D218NGacAac11B.1.1.1920.002309
ORF1ab/nsp3218D218EgaCgaA11B.1.1.1940.00495
ORF1ab/nsp3218D218EgaCgaA11B.1.1.2210.010101
ORF1ab/nsp3218D218DgaCgaT11B.1.1.2400.004695
ORF1ab/nsp3218D218DgaCgaT11B.1.1.2580.003257
ORF1ab/nsp3218D218EgaCgaA11B.1.1.2630.001558
ORF1ab/nsp3218D218YGacTac11B.1.1.2630.001558
ORF1ab/nsp3218D218YGacTac11B.1.1.280.000311
ORF1ab/nsp3218D218DgaCgaT11B.1.1.2980.000862
ORF1ab/nsp3218D218EgaCgaA11B.1.1.330.000421
ORF1ab/nsp3218D218EgaCgaA11B.1.1.370.000193
ORF1ab/nsp3218D218EgaCgaA11B.1.1.3720.000689
ORF1ab/nsp3218D218YGacTac11B.1.1.3890.006061
ORF1ab/nsp3218D218EgaCgaA11B.1.1.4190.007407
ORF1ab/nsp3218D218GgAcgGc11B.1.1.440.00241
ORF1ab/nsp3218D218EgaCgaA11B.1.1.4490.022727
ORF1ab/nsp3218D218DgaCgaT11B.1.1.4860.001577
ORF1ab/nsp3218D218NGacAac11B.1.1.500.000679
ORF1ab/nsp3218D218EgaCgaA11B.1.1.5180.006329
ORF1ab/nsp3218D218GgAcgGc11B.1.1.5230.001563
ORF1ab/nsp3218D218VgAcgTc11B.1.1.70.000001
ORF1ab/nsp3218D218del1Gac-ac11B.1.1.70.000001
ORF1ab/nsp3218D218delGAC---11B.1.1.70.000001
ORF1ab/nsp3218D218DgaCgaT11B.1.1.700.000341
ORF1ab/nsp3218D218EgaCgaA11B.1.1.710.006061
ORF1ab/nsp3218D218DgaCgaT11B.1.1.710.006061
ORF1ab/nsp3218D218YGacTac11B.1.1.750.010638
ORF1ab/nsp3218D218EgaCgaA11B.1.1.830.00271
ORF1ab/nsp3218D218GgAcgGc11B.1.1430.021277
ORF1ab/nsp3218D218DgaCgaT11B.1.1600.000031
ORF1ab/nsp3218D218delGAC---11B.1.160.160.000929
ORF1ab/nsp3218D218DgaCgaT11B.1.160.300.002976
ORF1ab/nsp3218D218NGacAac11B.1.1770.000013
ORF1ab/nsp3218D218DgaCgaT11B.1.177.150.000631
ORF1ab/nsp3218D218EgaCgaG11B.1.177.170.000821
ORF1ab/nsp3218D218NGacAac11B.1.177.350.000691
ORF1ab/nsp3218D218DgaCgaT11B.1.177.40.000211
ORF1ab/nsp3218D218YGacTac11B.1.177.570.000281
ORF1ab/nsp3218D218DgaCgaT11B.1.177.600.000218
ORF1ab/nsp3218D218EgaCgaA11B.1.177.730.000566
ORF1ab/nsp3218D218YGacTac11B.1.20.000009
ORF1ab/nsp3218D218EgaCgaA11B.1.20.000009
ORF1ab/nsp3218D218DgaCgaT11B.1.2060.000816
ORF1ab/nsp3218D218YGacTac11B.1.2210.000071
ORF1ab/nsp3218D218DgaCgaT11B.1.2210.000071
ORF1ab/nsp3218D218EgaCgaA11B.1.221.40.004167
ORF1ab/nsp3218D218NGacAac11B.1.2340.000132
ORF1ab/nsp3218D218GgAcgGc11B.1.2350.002519
ORF1ab/nsp3218D218EgaCgaA11B.1.2430.00007
ORF1ab/nsp3218D218YGacTac11B.1.2430.00007
ORF1ab/nsp3218D218GgAcgGc11B.1.2430.00007
ORF1ab/nsp3218D218AgAcgCc11B.1.2430.00007
ORF1ab/nsp3218D218DgaCgaT11B.1.2580.000067
ORF1ab/nsp3218D218YGacTac11B.1.3010.005917
ORF1ab/nsp3218D218NGacAac11B.1.3110.000275
ORF1ab/nsp3218D218NGacAac11B.1.3130.006579
ORF1ab/nsp3218D218NGacAac11B.1.3290.000608
ORF1ab/nsp3218D218delGAC---11B.1.3510.00003
ORF1ab/nsp3218D218NGacAac11B.1.3510.00003
ORF1ab/nsp3218D218DgaCgaT11B.1.3510.00003
ORF1ab/nsp3218D218AgAcgCc11B.1.360.000146
ORF1ab/nsp3218D218NGacAac11B.1.36.270.000763
ORF1ab/nsp3218D218DgaCgaT11B.1.36.360.000602
ORF1ab/nsp3218D218EgaCgaA11B.1.3620.001541
ORF1ab/nsp3218D218NGacAac11B.1.3670.000792
ORF1ab/nsp3218D218EgaCgaA11B.1.3710.001122
ORF1ab/nsp3218D218EgaCgaA11B.1.4160.001269
ORF1ab/nsp3218D218delGAC---11B.1.4290.000024
ORF1ab/nsp3218D218DgaCgaT11B.1.4320.011236
ORF1ab/nsp3218D218PGAcCCc11B.1.4970.000315
ORF1ab/nsp3218D218HGacCac11B.1.5260.000024
ORF1ab/nsp3218D218EgaCgaA11B.1.5300.007143
ORF1ab/nsp3218D218AgAcgCc11B.1.5610.000397
ORF1ab/nsp3218D218NGacAac11B.1.5610.000397
ORF1ab/nsp3218D218GgAcgGc11B.1.5670.003333
ORF1ab/nsp3218D218NGacAac11B.1.5960.000087
ORF1ab/nsp3218D218DgaCgaT11B.1.617.10.000129
ORF1ab/nsp3218D218del1gaCga-11B.1.617.20.000004
ORF1ab/nsp3218D218delGAC---11B.1.617.20.000004
ORF1ab/nsp3218D218NGacAac11B.1.617.20.000004
ORF1ab/nsp3218D218DgaCgaT11B.1.6210.000089
ORF1ab/nsp3218D218YGacTac11B.1.6230.000536
ORF1ab/nsp3218D218delGAC---11B.1.6300.005236
ORF1ab/nsp3218D218DgaCgaT11B.1.6370.000073
ORF1ab/nsp3218D218NGacAac11B.1.6370.000073
ORF1ab/nsp3218D218EgaCgaA11B.1.780.008547
ORF1ab/nsp3218D218NGacAac11C.160.00106
ORF1ab/nsp3218D218YGacTac11C.370.000116
ORF1ab/nsp3218D218DgaCgaT11C.370.000116
ORF1ab/nsp3218D218YGacTac11P.10.000016
ORF1ab/nsp3218D218EgaCgaA11P.10.000016
ORF1ab/nsp3218D218delGAC---11P.10.000016
ORF1ab/nsp3218D218YGacTac11P.1.140.000048
ORF1ab/nsp3218D218delGAC---11R.10.00009
ORF1ab/nsp3218D218DgaCgaT11R.10.00009
ORF1ab/nsp3218D218DgaCgaT11W.10.008696

CoV-GLUE is still in development. CoV-GLUE was originally developed as part of COG-UK by Josh Singer using the GLUE framework at the MRC-University of Glasgow Centre for Virus Research (CVR). In 2021 it was redeveloped by Richard Orton to scale to the millions of genome sequences available. We acknowledge support from the MRC (MC_UU_12014/12), WT (220977/Z/20/Z) and UKRI G2P (MR/W005611/1). Please contact Richard Orton with any queries: Richard.Orton@glasgow.ac.uk

CoV-GLUE uses sequence data from GISAID. GISAID data provided via this web application is subject to GISAID's Terms and Conditions.